2024-12-08 23:51:47,321 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 23:51:47,687 Running on GPU
2024-12-08 23:51:51,517 Found 6 citations for tools or databases
2024-12-08 23:51:51,517 Query 1/1: TRIM28_ZNF721 (length 1746)
2024-12-08 23:51:51,836 Sleeping for 5s. Reason: PENDING
2024-12-08 23:51:57,107 Sleeping for 10s. Reason: RUNNING
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2024-12-08 23:55:48,796 Sleeping for 5s. Reason: RUNNING
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2024-12-08 23:56:04,331 Sleeping for 8s. Reason: PENDING
2024-12-08 23:56:12,590 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:56:21,850 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:56:29,103 Sleeping for 10s. Reason: RUNNING
2024-12-08 23:56:39,362 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:56:48,621 Sleeping for 10s. Reason: RUNNING
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2024-12-08 23:57:35,163 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:57:44,420 Sleeping for 7s. Reason: RUNNING
2024-12-08 23:57:51,676 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:57:59,932 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:58:06,190 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:58:15,447 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:58:21,708 Sleeping for 9s. Reason: RUNNING
2024-12-08 23:58:30,967 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:58:39,233 Sleeping for 6s. Reason: RUNNING
2024-12-08 23:58:45,486 Sleeping for 8s. Reason: RUNNING
2024-12-08 23:58:59,235 Setting max_seq=508, max_extra_seq=2048
2024-12-09 00:03:42,834 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.2 pTM=0.279 ipTM=0.166
2024-12-09 00:05:11,512 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.9 pTM=0.265 ipTM=0.178 tol=14.8
2024-12-09 00:06:40,371 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.1 pTM=0.272 ipTM=0.185 tol=7.07
2024-12-09 00:08:09,182 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43.9 pTM=0.265 ipTM=0.185 tol=6.3
2024-12-09 00:09:38,019 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.9 pTM=0.271 ipTM=0.186 tol=5.55
2024-12-09 00:11:06,866 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.7 pTM=0.269 ipTM=0.185 tol=6.65
2024-12-09 00:12:35,694 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45 pTM=0.275 ipTM=0.186 tol=4.05
2024-12-09 00:14:04,552 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44.9 pTM=0.273 ipTM=0.184 tol=4.5
2024-12-09 00:15:33,483 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.7 pTM=0.274 ipTM=0.183 tol=3.6
2024-12-09 00:17:02,356 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.7 pTM=0.272 ipTM=0.185 tol=2.59
2024-12-09 00:18:31,133 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.5 pTM=0.272 ipTM=0.186 tol=3.87
2024-12-09 00:19:59,896 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44 pTM=0.273 ipTM=0.186 tol=2.75
2024-12-09 00:21:28,665 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44.1 pTM=0.271 ipTM=0.186 tol=3.61
2024-12-09 00:22:57,473 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.1 pTM=0.272 ipTM=0.186 tol=2.67
2024-12-09 00:24:26,404 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=43.3 pTM=0.258 ipTM=0.187 tol=9.49
2024-12-09 00:25:55,352 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.3 pTM=0.26 ipTM=0.191 tol=10.9
2024-12-09 00:27:24,239 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.2 pTM=0.261 ipTM=0.192 tol=5.17
2024-12-09 00:28:53,180 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.9 pTM=0.262 ipTM=0.193 tol=3.73
2024-12-09 00:30:22,193 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.4 pTM=0.262 ipTM=0.193 tol=3.05
2024-12-09 00:31:51,180 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.1 pTM=0.261 ipTM=0.191 tol=1.76
2024-12-09 00:33:20,143 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.4 pTM=0.261 ipTM=0.191 tol=1.72
2024-12-09 00:34:49,088 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.5 pTM=0.261 ipTM=0.191 tol=1.96
2024-12-09 00:36:17,982 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.7 pTM=0.261 ipTM=0.192 tol=1.89
2024-12-09 00:37:46,947 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47 pTM=0.262 ipTM=0.192 tol=2.13
2024-12-09 00:39:15,781 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.9 pTM=0.262 ipTM=0.192 tol=3.83
2024-12-09 00:40:44,639 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.4 pTM=0.262 ipTM=0.193 tol=1.63
2024-12-09 00:42:13,668 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.2 pTM=0.262 ipTM=0.193 tol=4.01
2024-12-09 00:43:42,569 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47 pTM=0.262 ipTM=0.192 tol=1.8
2024-12-09 00:45:11,486 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.4 pTM=0.261 ipTM=0.19 tol=1.73
2024-12-09 00:46:40,324 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47 pTM=0.261 ipTM=0.189 tol=1.74
2024-12-09 00:48:09,229 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.5 pTM=0.262 ipTM=0.191 tol=2.18
2024-12-09 00:48:09,231 alphafold2_multimer_v3_model_1_seed_000 took 2943.2s (30 recycles)
2024-12-09 00:49:40,687 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.1 pTM=0.255 ipTM=0.179
2024-12-09 00:51:09,918 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.1 pTM=0.252 ipTM=0.18 tol=19.4
2024-12-09 00:52:39,077 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.8 pTM=0.256 ipTM=0.184 tol=7.14
2024-12-09 00:54:08,195 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.6 pTM=0.257 ipTM=0.184 tol=5.88
2024-12-09 00:55:37,279 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.1 pTM=0.258 ipTM=0.185 tol=4.23
2024-12-09 00:57:06,361 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.7 pTM=0.258 ipTM=0.185 tol=3.96
2024-12-09 00:58:35,485 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48 pTM=0.258 ipTM=0.187 tol=5.25
2024-12-09 01:00:04,661 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47.8 pTM=0.26 ipTM=0.19 tol=3.47
2024-12-09 01:01:33,850 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.1 pTM=0.261 ipTM=0.191 tol=3.99
2024-12-09 01:03:03,070 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.4 pTM=0.26 ipTM=0.193 tol=3.63
2024-12-09 01:04:32,213 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.5 pTM=0.259 ipTM=0.192 tol=2.96
2024-12-09 01:06:01,294 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.3 pTM=0.26 ipTM=0.191 tol=2.64
2024-12-09 01:07:30,379 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47 pTM=0.261 ipTM=0.192 tol=2.19
2024-12-09 01:08:59,523 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48 pTM=0.261 ipTM=0.19 tol=2.68
2024-12-09 01:10:28,643 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.6 pTM=0.261 ipTM=0.19 tol=3.52
2024-12-09 01:11:57,817 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.4 pTM=0.261 ipTM=0.191 tol=2.47
2024-12-09 01:13:26,888 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.5 pTM=0.26 ipTM=0.19 tol=1.83
2024-12-09 01:14:55,967 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.9 pTM=0.26 ipTM=0.188 tol=2.25
2024-12-09 01:16:25,036 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.3 pTM=0.26 ipTM=0.19 tol=2.84
2024-12-09 01:17:54,127 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.1 pTM=0.258 ipTM=0.189 tol=3.02
2024-12-09 01:19:23,252 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.2 pTM=0.258 ipTM=0.189 tol=3.22
2024-12-09 01:20:52,349 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.3 pTM=0.257 ipTM=0.187 tol=3.09
2024-12-09 01:22:21,450 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.6 pTM=0.258 ipTM=0.188 tol=3.62
2024-12-09 01:23:50,584 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.6 pTM=0.259 ipTM=0.19 tol=3.27
2024-12-09 01:25:19,746 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.1 pTM=0.259 ipTM=0.188 tol=3.21
2024-12-09 01:26:48,885 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.2 pTM=0.258 ipTM=0.188 tol=3.55
2024-12-09 01:28:18,020 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.4 pTM=0.26 ipTM=0.188 tol=3.57
2024-12-09 01:29:47,140 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46.9 pTM=0.259 ipTM=0.188 tol=4.72
2024-12-09 01:31:16,384 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.5 pTM=0.258 ipTM=0.189 tol=4.06
2024-12-09 01:32:46,246 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.7 pTM=0.257 ipTM=0.189 tol=4.68
2024-12-09 01:34:15,758 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.1 pTM=0.258 ipTM=0.188 tol=5.34
2024-12-09 01:34:15,761 alphafold2_multimer_v3_model_2_seed_000 took 2764.3s (30 recycles)
2024-12-09 01:35:48,040 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.6 pTM=0.24 ipTM=0.159
2024-12-09 01:37:17,760 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.9 pTM=0.249 ipTM=0.165 tol=25.3
2024-12-09 01:38:47,382 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45 pTM=0.258 ipTM=0.172 tol=8.2
2024-12-09 01:40:17,069 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=44.6 pTM=0.255 ipTM=0.173 tol=6.46
2024-12-09 01:41:46,659 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.3 pTM=0.257 ipTM=0.172 tol=5.17
2024-12-09 01:43:16,232 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45 pTM=0.254 ipTM=0.173 tol=4.66
2024-12-09 01:44:45,903 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.1 pTM=0.256 ipTM=0.171 tol=3.36
2024-12-09 01:46:15,512 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.4 pTM=0.256 ipTM=0.17 tol=3
2024-12-09 01:47:45,086 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.2 pTM=0.255 ipTM=0.171 tol=2.84
2024-12-09 01:49:14,669 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.5 pTM=0.255 ipTM=0.171 tol=4.64
2024-12-09 01:50:44,285 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.4 pTM=0.253 ipTM=0.172 tol=3.73
2024-12-09 01:52:13,882 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.7 pTM=0.254 ipTM=0.174 tol=3.37
2024-12-09 01:53:43,466 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.2 pTM=0.254 ipTM=0.175 tol=6.14
2024-12-09 01:55:13,040 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.9 pTM=0.257 ipTM=0.175 tol=4.89
2024-12-09 01:56:42,566 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.8 pTM=0.255 ipTM=0.177 tol=3.56
2024-12-09 01:58:12,093 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.4 pTM=0.255 ipTM=0.178 tol=3.02
2024-12-09 01:59:41,626 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.4 pTM=0.255 ipTM=0.176 tol=3.34
2024-12-09 02:01:11,203 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.2 pTM=0.255 ipTM=0.175 tol=3.33
2024-12-09 02:02:40,768 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.3 pTM=0.257 ipTM=0.176 tol=3.58
2024-12-09 02:04:10,363 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45 pTM=0.255 ipTM=0.177 tol=3.45
2024-12-09 02:05:39,971 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.4 pTM=0.254 ipTM=0.174 tol=4.16
2024-12-09 02:07:09,658 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.1 pTM=0.252 ipTM=0.172 tol=7.18
2024-12-09 02:08:39,292 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.6 pTM=0.254 ipTM=0.175 tol=5.93
2024-12-09 02:10:08,862 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.4 pTM=0.256 ipTM=0.178 tol=3.08
2024-12-09 02:11:38,393 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.6 pTM=0.255 ipTM=0.178 tol=2.86
2024-12-09 02:13:07,807 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.2 pTM=0.256 ipTM=0.18 tol=3.01
2024-12-09 02:14:37,208 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.3 pTM=0.256 ipTM=0.179 tol=2.39
2024-12-09 02:16:06,513 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.5 pTM=0.256 ipTM=0.179 tol=2.57
2024-12-09 02:17:35,808 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.4 pTM=0.255 ipTM=0.178 tol=2.8
2024-12-09 02:19:05,164 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.7 pTM=0.255 ipTM=0.177 tol=2.98
2024-12-09 02:20:34,560 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.1 pTM=0.257 ipTM=0.177 tol=2.68
2024-12-09 02:20:34,562 alphafold2_multimer_v3_model_3_seed_000 took 2776.5s (30 recycles)
2024-12-09 02:22:06,732 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.5 pTM=0.26 ipTM=0.162
2024-12-09 02:23:36,592 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.8 pTM=0.251 ipTM=0.163 tol=10.1
2024-12-09 02:25:06,327 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.6 pTM=0.267 ipTM=0.163 tol=7.07
2024-12-09 02:26:36,010 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.9 pTM=0.275 ipTM=0.164 tol=5.11
2024-12-09 02:28:05,654 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48 pTM=0.273 ipTM=0.163 tol=6.43
2024-12-09 02:29:35,325 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.6 pTM=0.272 ipTM=0.164 tol=6.49
2024-12-09 02:31:04,966 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.5 pTM=0.272 ipTM=0.164 tol=7.12
2024-12-09 02:32:34,655 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.1 pTM=0.245 ipTM=0.164 tol=6.33
2024-12-09 02:34:04,570 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.2 pTM=0.243 ipTM=0.163 tol=16.5
2024-12-09 02:35:34,366 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.5 pTM=0.244 ipTM=0.164 tol=5.57
2024-12-09 02:37:04,103 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.4 pTM=0.244 ipTM=0.165 tol=3.92
2024-12-09 02:38:33,915 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.7 pTM=0.244 ipTM=0.165 tol=3.13
2024-12-09 02:40:03,731 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.6 pTM=0.243 ipTM=0.164 tol=2.81
2024-12-09 02:41:33,529 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.4 pTM=0.245 ipTM=0.166 tol=2.3
2024-12-09 02:43:03,416 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.2 pTM=0.244 ipTM=0.165 tol=2.15
2024-12-09 02:44:33,305 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.2 pTM=0.244 ipTM=0.166 tol=3.62
2024-12-09 02:46:03,214 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.5 pTM=0.244 ipTM=0.165 tol=3.81
2024-12-09 02:47:33,070 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=49.6 pTM=0.244 ipTM=0.164 tol=4.46
2024-12-09 02:49:03,011 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.3 pTM=0.244 ipTM=0.165 tol=2.04
2024-12-09 02:50:32,828 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.7 pTM=0.244 ipTM=0.165 tol=3.97
2024-12-09 02:52:02,535 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49.6 pTM=0.244 ipTM=0.165 tol=2.24
2024-12-09 02:53:32,231 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.3 pTM=0.243 ipTM=0.164 tol=2.04
2024-12-09 02:55:01,969 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=49.1 pTM=0.244 ipTM=0.165 tol=2.57
2024-12-09 02:56:31,682 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=49.6 pTM=0.244 ipTM=0.165 tol=2.11
2024-12-09 02:58:01,451 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=49.5 pTM=0.244 ipTM=0.165 tol=2.54
2024-12-09 02:59:31,260 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.5 pTM=0.244 ipTM=0.165 tol=3.73
2024-12-09 03:01:00,963 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.3 pTM=0.244 ipTM=0.166 tol=3.26
2024-12-09 03:02:30,629 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=49.2 pTM=0.244 ipTM=0.165 tol=2.38
2024-12-09 03:04:00,325 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49.6 pTM=0.244 ipTM=0.165 tol=2.13
2024-12-09 03:05:30,015 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.5 pTM=0.244 ipTM=0.165 tol=3.23
2024-12-09 03:06:59,689 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.6 pTM=0.244 ipTM=0.166 tol=3.16
2024-12-09 03:06:59,691 alphafold2_multimer_v3_model_4_seed_000 took 2782.7s (30 recycles)
2024-12-09 03:08:31,353 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.4 pTM=0.243 ipTM=0.161
2024-12-09 03:10:00,560 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.1 pTM=0.249 ipTM=0.171 tol=17.9
2024-12-09 03:11:29,594 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.8 pTM=0.252 ipTM=0.174 tol=7.35
2024-12-09 03:12:58,629 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.4 pTM=0.251 ipTM=0.174 tol=5.37
2024-12-09 03:14:27,665 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.2 pTM=0.253 ipTM=0.175 tol=4.55
2024-12-09 03:15:56,784 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.4 pTM=0.252 ipTM=0.175 tol=3.82
2024-12-09 03:17:25,865 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.3 pTM=0.253 ipTM=0.176 tol=3.59
2024-12-09 03:18:54,988 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.8 pTM=0.253 ipTM=0.174 tol=3.1
2024-12-09 03:20:24,106 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.5 pTM=0.253 ipTM=0.175 tol=3.91
2024-12-09 03:21:53,239 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.7 pTM=0.253 ipTM=0.176 tol=3.39
2024-12-09 03:23:22,336 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44.7 pTM=0.254 ipTM=0.177 tol=3.69
2024-12-09 03:24:51,417 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.7 pTM=0.254 ipTM=0.175 tol=3.72
2024-12-09 03:26:20,514 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44.7 pTM=0.254 ipTM=0.175 tol=1.87
2024-12-09 03:27:49,624 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45 pTM=0.254 ipTM=0.175 tol=2.38
2024-12-09 03:29:18,743 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44.3 pTM=0.253 ipTM=0.175 tol=1.82
2024-12-09 03:30:47,857 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43.7 pTM=0.254 ipTM=0.175 tol=1.82
2024-12-09 03:32:16,975 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44.5 pTM=0.254 ipTM=0.176 tol=1.58
2024-12-09 03:33:46,058 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.3 pTM=0.255 ipTM=0.176 tol=1.83
2024-12-09 03:35:15,148 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.7 pTM=0.255 ipTM=0.178 tol=2.14
2024-12-09 03:36:44,201 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44.5 pTM=0.256 ipTM=0.178 tol=1.96
2024-12-09 03:38:13,277 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.8 pTM=0.256 ipTM=0.179 tol=3.07
2024-12-09 03:39:42,405 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.2 pTM=0.255 ipTM=0.179 tol=3.41
2024-12-09 03:41:11,465 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=44.2 pTM=0.255 ipTM=0.179 tol=3.03
2024-12-09 03:42:40,541 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.2 pTM=0.255 ipTM=0.178 tol=3.31
2024-12-09 03:44:09,674 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=44.4 pTM=0.255 ipTM=0.178 tol=3.22
2024-12-09 03:45:38,743 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.1 pTM=0.255 ipTM=0.18 tol=2.9
2024-12-09 03:47:07,849 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.9 pTM=0.255 ipTM=0.179 tol=3.56
2024-12-09 03:48:36,982 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44.1 pTM=0.256 ipTM=0.18 tol=2.92
2024-12-09 03:50:06,064 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.3 pTM=0.257 ipTM=0.181 tol=3.21
2024-12-09 03:51:35,119 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.3 pTM=0.257 ipTM=0.182 tol=4.14
2024-12-09 03:53:04,185 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.8 pTM=0.257 ipTM=0.182 tol=2.32
2024-12-09 03:53:04,187 alphafold2_multimer_v3_model_5_seed_000 took 2762.2s (30 recycles)
2024-12-09 03:53:06,472 reranking models by 'multimer' metric
2024-12-09 03:53:09,083 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 04:04:39,516 Relaxation took 693.0s
2024-12-09 04:04:39,517 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.5 pTM=0.262 ipTM=0.191
2024-12-09 04:14:11,359 Relaxation took 571.8s
2024-12-09 04:14:11,360 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.1 pTM=0.258 ipTM=0.188
2024-12-09 04:25:20,466 Relaxation took 669.1s
2024-12-09 04:25:20,466 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.8 pTM=0.257 ipTM=0.182
2024-12-09 04:31:36,330 Relaxation took 375.9s
2024-12-09 04:31:36,330 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.1 pTM=0.257 ipTM=0.177
2024-12-09 04:41:32,992 Relaxation took 596.7s
2024-12-09 04:41:32,992 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.6 pTM=0.244 ipTM=0.166
2024-12-09 04:41:37,803 Done