2024-12-09 01:39:07,354 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 01:39:07,690 Running on GPU
2024-12-09 01:39:12,593 Found 6 citations for tools or databases
2024-12-09 01:39:12,593 Query 1/1: TRIM33_NUP62 (length 1649)
2024-12-09 01:39:12,917 Sleeping for 10s. Reason: PENDING
2024-12-09 01:39:23,177 Sleeping for 10s. Reason: RUNNING
2024-12-09 01:39:33,432 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:39:39,694 Sleeping for 7s. Reason: RUNNING
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2024-12-09 01:39:54,201 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:40:00,452 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:40:05,711 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:40:12,964 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:40:20,225 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:40:29,481 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:40:36,741 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:40:43,996 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:40:49,255 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:40:58,516 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:41:07,777 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:41:15,031 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:41:22,287 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:41:30,547 Sleeping for 10s. Reason: RUNNING
2024-12-09 01:41:40,810 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:41:50,413 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:41:55,667 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:42:02,925 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:42:08,177 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:42:16,441 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:42:36,249 Sleeping for 10s. Reason: PENDING
2024-12-09 01:42:46,510 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:42:51,762 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:43:01,017 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:43:06,268 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:43:15,522 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:43:21,777 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:43:31,044 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:43:38,306 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:43:43,567 Sleeping for 10s. Reason: RUNNING
2024-12-09 01:43:53,828 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:43:59,081 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:44:08,336 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:44:15,590 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:44:22,845 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:44:36,284 Setting max_seq=508, max_extra_seq=2048
2024-12-09 01:48:59,354 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.7 pTM=0.296 ipTM=0.158
2024-12-09 01:50:27,385 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.2 pTM=0.289 ipTM=0.161 tol=22
2024-12-09 01:51:55,479 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.3 pTM=0.284 ipTM=0.169 tol=12.9
2024-12-09 01:53:23,582 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=39.1 pTM=0.281 ipTM=0.178 tol=11
2024-12-09 01:54:51,693 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.1 pTM=0.282 ipTM=0.185 tol=9.18
2024-12-09 01:56:19,937 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=39.6 pTM=0.266 ipTM=0.18 tol=21.2
2024-12-09 01:57:48,057 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.3 pTM=0.267 ipTM=0.184 tol=11.6
2024-12-09 01:59:16,190 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.8 pTM=0.27 ipTM=0.174 tol=6.79
2024-12-09 02:00:44,352 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.9 pTM=0.271 ipTM=0.177 tol=5.32
2024-12-09 02:02:12,538 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.8 pTM=0.27 ipTM=0.18 tol=6.62
2024-12-09 02:03:40,783 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42 pTM=0.268 ipTM=0.179 tol=5.34
2024-12-09 02:05:09,117 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.9 pTM=0.27 ipTM=0.179 tol=5.81
2024-12-09 02:06:37,414 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.9 pTM=0.271 ipTM=0.178 tol=5.34
2024-12-09 02:08:05,739 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.9 pTM=0.269 ipTM=0.178 tol=5.75
2024-12-09 02:09:34,023 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42 pTM=0.269 ipTM=0.178 tol=5.31
2024-12-09 02:11:02,185 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.9 pTM=0.27 ipTM=0.177 tol=5.6
2024-12-09 02:12:30,345 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42 pTM=0.269 ipTM=0.177 tol=5.49
2024-12-09 02:13:58,558 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.8 pTM=0.27 ipTM=0.179 tol=4.72
2024-12-09 02:15:26,770 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.2 pTM=0.27 ipTM=0.179 tol=5.2
2024-12-09 02:16:54,963 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42 pTM=0.27 ipTM=0.177 tol=4.39
2024-12-09 02:18:23,172 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.1 pTM=0.269 ipTM=0.176 tol=5.2
2024-12-09 02:19:51,394 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.2 pTM=0.27 ipTM=0.176 tol=5.19
2024-12-09 02:21:19,576 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.2 pTM=0.27 ipTM=0.177 tol=9.84
2024-12-09 02:22:47,742 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.9 pTM=0.271 ipTM=0.177 tol=10.8
2024-12-09 02:24:15,889 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.1 pTM=0.271 ipTM=0.178 tol=5.75
2024-12-09 02:25:43,978 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.2 pTM=0.27 ipTM=0.177 tol=4.09
2024-12-09 02:27:12,068 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.3 pTM=0.269 ipTM=0.178 tol=4.9
2024-12-09 02:28:40,212 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.2 pTM=0.271 ipTM=0.176 tol=5.31
2024-12-09 02:30:08,407 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42 pTM=0.27 ipTM=0.178 tol=11.7
2024-12-09 02:31:36,638 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.1 pTM=0.271 ipTM=0.177 tol=5.44
2024-12-09 02:33:04,908 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.2 pTM=0.271 ipTM=0.177 tol=4.79
2024-12-09 02:33:04,910 alphafold2_multimer_v3_model_1_seed_000 took 2903.2s (30 recycles)
2024-12-09 02:34:34,671 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=39.5 pTM=0.265 ipTM=0.159
2024-12-09 02:36:03,116 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=43.1 pTM=0.266 ipTM=0.162 tol=32.4
2024-12-09 02:37:31,473 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=43.5 pTM=0.267 ipTM=0.17 tol=17.3
2024-12-09 02:38:59,810 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=43.6 pTM=0.269 ipTM=0.17 tol=11.3
2024-12-09 02:40:28,232 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.6 pTM=0.267 ipTM=0.169 tol=10.5
2024-12-09 02:41:56,617 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.5 pTM=0.267 ipTM=0.17 tol=8.22
2024-12-09 02:43:24,992 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.4 pTM=0.267 ipTM=0.169 tol=6.53
2024-12-09 02:44:53,323 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=43.4 pTM=0.268 ipTM=0.169 tol=6.59
2024-12-09 02:46:21,595 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=43.5 pTM=0.269 ipTM=0.17 tol=10.1
2024-12-09 02:47:49,780 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43.5 pTM=0.27 ipTM=0.172 tol=9.7
2024-12-09 02:49:18,057 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.6 pTM=0.27 ipTM=0.17 tol=7.79
2024-12-09 02:50:46,389 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.7 pTM=0.269 ipTM=0.168 tol=6.94
2024-12-09 02:52:14,771 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.8 pTM=0.269 ipTM=0.167 tol=6.72
2024-12-09 02:53:43,169 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.8 pTM=0.269 ipTM=0.168 tol=10.7
2024-12-09 02:55:11,555 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.7 pTM=0.267 ipTM=0.167 tol=11.8
2024-12-09 02:56:39,936 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.7 pTM=0.267 ipTM=0.169 tol=10.6
2024-12-09 02:58:08,362 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.8 pTM=0.268 ipTM=0.168 tol=10.2
2024-12-09 02:59:36,773 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.7 pTM=0.268 ipTM=0.169 tol=10.9
2024-12-09 03:01:05,123 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.8 pTM=0.269 ipTM=0.172 tol=8.48
2024-12-09 03:02:33,506 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43.8 pTM=0.267 ipTM=0.172 tol=9.3
2024-12-09 03:04:01,894 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.8 pTM=0.266 ipTM=0.169 tol=8.21
2024-12-09 03:05:30,295 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=43.8 pTM=0.266 ipTM=0.168 tol=8.56
2024-12-09 03:06:58,665 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.8 pTM=0.265 ipTM=0.167 tol=8.52
2024-12-09 03:08:26,986 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.8 pTM=0.266 ipTM=0.168 tol=7.92
2024-12-09 03:09:55,313 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.8 pTM=0.266 ipTM=0.168 tol=6
2024-12-09 03:11:23,680 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.7 pTM=0.268 ipTM=0.167 tol=5.89
2024-12-09 03:12:52,047 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.7 pTM=0.268 ipTM=0.166 tol=5.34
2024-12-09 03:14:20,441 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=43.6 pTM=0.268 ipTM=0.167 tol=8.22
2024-12-09 03:15:48,835 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.6 pTM=0.268 ipTM=0.167 tol=7.81
2024-12-09 03:17:17,222 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.7 pTM=0.268 ipTM=0.167 tol=6.55
2024-12-09 03:18:45,644 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.8 pTM=0.268 ipTM=0.167 tol=6.23
2024-12-09 03:18:45,646 alphafold2_multimer_v3_model_2_seed_000 took 2739.1s (30 recycles)
2024-12-09 03:20:16,034 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=37.1 pTM=0.257 ipTM=0.156
2024-12-09 03:21:44,768 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.2 pTM=0.259 ipTM=0.154 tol=34.9
2024-12-09 03:23:13,477 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.4 pTM=0.269 ipTM=0.155 tol=16.8
2024-12-09 03:24:42,151 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.3 pTM=0.27 ipTM=0.158 tol=16
2024-12-09 03:26:10,877 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=42.6 pTM=0.271 ipTM=0.157 tol=13.2
2024-12-09 03:27:39,550 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.8 pTM=0.271 ipTM=0.159 tol=11.4
2024-12-09 03:29:08,226 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.8 pTM=0.271 ipTM=0.16 tol=11.4
2024-12-09 03:30:36,905 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.7 pTM=0.27 ipTM=0.16 tol=6.46
2024-12-09 03:32:05,605 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=42.7 pTM=0.271 ipTM=0.16 tol=6.51
2024-12-09 03:33:34,323 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.7 pTM=0.271 ipTM=0.16 tol=4.75
2024-12-09 03:35:03,173 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.7 pTM=0.272 ipTM=0.16 tol=5.13
2024-12-09 03:36:31,963 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.8 pTM=0.272 ipTM=0.16 tol=4.86
2024-12-09 03:38:00,704 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.7 pTM=0.272 ipTM=0.16 tol=3.88
2024-12-09 03:39:29,437 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.7 pTM=0.271 ipTM=0.16 tol=4.53
2024-12-09 03:40:58,157 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.7 pTM=0.271 ipTM=0.159 tol=5.12
2024-12-09 03:42:26,878 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=42.7 pTM=0.271 ipTM=0.161 tol=4.73
2024-12-09 03:43:55,696 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.5 pTM=0.269 ipTM=0.16 tol=5.08
2024-12-09 03:45:24,506 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.6 pTM=0.268 ipTM=0.16 tol=5.6
2024-12-09 03:46:53,349 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.6 pTM=0.269 ipTM=0.16 tol=5.04
2024-12-09 03:48:22,188 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.5 pTM=0.269 ipTM=0.16 tol=4.41
2024-12-09 03:49:51,026 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.8 pTM=0.268 ipTM=0.16 tol=4.39
2024-12-09 03:51:19,899 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.7 pTM=0.268 ipTM=0.16 tol=4.62
2024-12-09 03:52:48,729 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.7 pTM=0.27 ipTM=0.16 tol=3.68
2024-12-09 03:54:17,469 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.7 pTM=0.27 ipTM=0.16 tol=2.99
2024-12-09 03:55:46,201 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.9 pTM=0.27 ipTM=0.16 tol=3.45
2024-12-09 03:57:14,893 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.7 pTM=0.268 ipTM=0.16 tol=3.27
2024-12-09 03:58:43,569 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.7 pTM=0.27 ipTM=0.161 tol=3.68
2024-12-09 04:00:12,318 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.8 pTM=0.27 ipTM=0.161 tol=3.18
2024-12-09 04:01:41,118 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.8 pTM=0.268 ipTM=0.16 tol=4.23
2024-12-09 04:03:09,932 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.8 pTM=0.268 ipTM=0.16 tol=4.43
2024-12-09 04:04:38,798 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.7 pTM=0.268 ipTM=0.16 tol=3.37
2024-12-09 04:04:38,800 alphafold2_multimer_v3_model_3_seed_000 took 2751.5s (30 recycles)
2024-12-09 04:06:09,269 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38 pTM=0.288 ipTM=0.159
2024-12-09 04:07:38,222 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=38 pTM=0.259 ipTM=0.158 tol=36.2
2024-12-09 04:09:07,141 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=37 pTM=0.26 ipTM=0.159 tol=19.5
2024-12-09 04:10:36,022 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37.6 pTM=0.261 ipTM=0.163 tol=37.2
2024-12-09 04:12:04,799 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.5 pTM=0.266 ipTM=0.163 tol=17.6
2024-12-09 04:13:33,567 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.1 pTM=0.265 ipTM=0.161 tol=14.4
2024-12-09 04:15:02,312 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.2 pTM=0.265 ipTM=0.159 tol=11.3
2024-12-09 04:16:31,127 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=38.8 pTM=0.264 ipTM=0.163 tol=18.3
2024-12-09 04:17:59,885 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=38.8 pTM=0.265 ipTM=0.16 tol=15.5
2024-12-09 04:19:28,559 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38.6 pTM=0.267 ipTM=0.177 tol=10.1
2024-12-09 04:20:57,318 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=38.7 pTM=0.267 ipTM=0.161 tol=10.2
2024-12-09 04:22:26,121 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.7 pTM=0.265 ipTM=0.17 tol=20.7
2024-12-09 04:23:54,893 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=38.8 pTM=0.266 ipTM=0.163 tol=14.1
2024-12-09 04:25:23,623 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.1 pTM=0.27 ipTM=0.176 tol=7.66
2024-12-09 04:26:52,328 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=38.9 pTM=0.266 ipTM=0.164 tol=10.2
2024-12-09 04:28:21,043 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39 pTM=0.266 ipTM=0.164 tol=10.4
2024-12-09 04:29:49,797 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39 pTM=0.266 ipTM=0.164 tol=8.98
2024-12-09 04:31:18,512 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=38.8 pTM=0.266 ipTM=0.163 tol=8.62
2024-12-09 04:32:47,190 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39 pTM=0.265 ipTM=0.165 tol=8.54
2024-12-09 04:34:15,810 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=38.7 pTM=0.267 ipTM=0.167 tol=7.48
2024-12-09 04:35:44,507 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=38.7 pTM=0.265 ipTM=0.165 tol=9.18
2024-12-09 04:37:13,215 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=38.9 pTM=0.265 ipTM=0.162 tol=8.13
2024-12-09 04:38:41,952 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.2 pTM=0.266 ipTM=0.166 tol=9.95
2024-12-09 04:40:10,627 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=38.9 pTM=0.267 ipTM=0.163 tol=8.98
2024-12-09 04:41:39,380 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=38.7 pTM=0.268 ipTM=0.168 tol=7.09
2024-12-09 04:43:08,145 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=38.5 pTM=0.268 ipTM=0.168 tol=6.31
2024-12-09 04:44:36,822 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=38.7 pTM=0.269 ipTM=0.168 tol=6.89
2024-12-09 04:46:05,466 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=38.9 pTM=0.267 ipTM=0.161 tol=7.14
2024-12-09 04:47:34,103 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=38.8 pTM=0.269 ipTM=0.169 tol=8.96
2024-12-09 04:49:02,714 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=38.8 pTM=0.269 ipTM=0.164 tol=7.45
2024-12-09 04:50:31,322 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=38.6 pTM=0.269 ipTM=0.171 tol=9.8
2024-12-09 04:50:31,324 alphafold2_multimer_v3_model_4_seed_000 took 2750.9s (30 recycles)
2024-12-09 04:52:01,869 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=38.6 pTM=0.256 ipTM=0.155
2024-12-09 04:53:30,760 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.4 pTM=0.26 ipTM=0.16 tol=33.4
2024-12-09 04:54:59,557 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.9 pTM=0.262 ipTM=0.159 tol=19.5
2024-12-09 04:56:28,413 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.1 pTM=0.264 ipTM=0.168 tol=13.5
2024-12-09 04:57:57,237 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.1 pTM=0.267 ipTM=0.167 tol=14.2
2024-12-09 04:59:26,050 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.2 pTM=0.267 ipTM=0.165 tol=11.6
2024-12-09 05:00:54,840 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.4 pTM=0.269 ipTM=0.164 tol=10.1
2024-12-09 05:02:23,619 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.2 pTM=0.269 ipTM=0.163 tol=9.48
2024-12-09 05:03:52,309 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.3 pTM=0.271 ipTM=0.165 tol=13.6
2024-12-09 05:05:20,960 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.3 pTM=0.271 ipTM=0.165 tol=10.9
2024-12-09 05:06:49,703 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.3 pTM=0.271 ipTM=0.167 tol=12.4
2024-12-09 05:08:18,380 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.5 pTM=0.272 ipTM=0.165 tol=6.31
2024-12-09 05:09:47,099 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.6 pTM=0.273 ipTM=0.166 tol=5.68
2024-12-09 05:11:15,893 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.5 pTM=0.272 ipTM=0.166 tol=7.34
2024-12-09 05:12:44,724 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.4 pTM=0.273 ipTM=0.166 tol=11.5
2024-12-09 05:14:13,537 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.2 pTM=0.271 ipTM=0.167 tol=8.66
2024-12-09 05:15:42,315 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.2 pTM=0.271 ipTM=0.168 tol=12.5
2024-12-09 05:17:11,105 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.3 pTM=0.271 ipTM=0.167 tol=13.8
2024-12-09 05:18:39,916 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.4 pTM=0.271 ipTM=0.166 tol=6.75
2024-12-09 05:20:08,680 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.2 pTM=0.272 ipTM=0.168 tol=7.17
2024-12-09 05:21:37,400 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.4 pTM=0.271 ipTM=0.167 tol=11
2024-12-09 05:23:06,180 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.3 pTM=0.27 ipTM=0.167 tol=9.4
2024-12-09 05:24:34,920 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.3 pTM=0.272 ipTM=0.167 tol=7.12
2024-12-09 05:26:03,678 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.3 pTM=0.272 ipTM=0.167 tol=10.4
2024-12-09 05:27:32,538 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.6 pTM=0.272 ipTM=0.169 tol=10.7
2024-12-09 05:29:01,388 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.3 pTM=0.271 ipTM=0.167 tol=9.23
2024-12-09 05:30:30,162 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.4 pTM=0.271 ipTM=0.167 tol=10.2
2024-12-09 05:31:59,007 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.4 pTM=0.271 ipTM=0.168 tol=8.3
2024-12-09 05:33:27,834 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.3 pTM=0.271 ipTM=0.167 tol=12.1
2024-12-09 05:34:56,595 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.3 pTM=0.271 ipTM=0.168 tol=6.67
2024-12-09 05:36:25,334 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.3 pTM=0.272 ipTM=0.169 tol=10.6
2024-12-09 05:36:25,336 alphafold2_multimer_v3_model_5_seed_000 took 2752.4s (30 recycles)
2024-12-09 05:36:26,933 reranking models by 'multimer' metric
2024-12-09 05:36:29,272 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 05:41:35,227 Relaxation took 308.3s
2024-12-09 05:41:35,227 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.2 pTM=0.271 ipTM=0.177
2024-12-09 06:09:12,413 Relaxation took 1657.2s
2024-12-09 06:09:12,413 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=38.6 pTM=0.269 ipTM=0.171
2024-12-09 06:12:27,879 Relaxation took 195.5s
2024-12-09 06:12:27,879 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.3 pTM=0.272 ipTM=0.169
2024-12-09 06:15:37,667 Relaxation took 189.8s
2024-12-09 06:15:37,667 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.8 pTM=0.268 ipTM=0.167
2024-12-09 06:19:13,449 Relaxation took 215.8s
2024-12-09 06:19:13,449 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.7 pTM=0.268 ipTM=0.16
2024-12-09 06:19:17,179 Done