2024-12-09 01:50:43,898 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 01:50:44,206 Running on GPU
2024-12-09 01:50:48,593 Found 6 citations for tools or databases
2024-12-09 01:50:48,593 Query 1/1: TRIM35_AKTIP (length 785)
2024-12-09 01:50:48,904 Sleeping for 9s. Reason: PENDING
2024-12-09 01:50:58,164 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:51:06,424 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:51:13,686 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:51:19,943 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:51:25,199 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:51:33,454 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:51:39,706 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:51:45,962 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:51:54,216 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:51:59,472 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:52:08,728 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:52:17,991 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:52:24,250 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:52:31,510 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:52:36,762 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:52:42,013 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:52:48,264 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:52:53,522 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:52:59,781 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:53:05,036 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:53:10,294 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:53:19,556 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:53:25,817 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:53:35,076 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:53:42,334 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:53:48,587 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:53:57,849 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:54:07,866 Sleeping for 7s. Reason: PENDING
2024-12-09 01:54:15,121 Sleeping for 10s. Reason: RUNNING
2024-12-09 01:54:25,378 Sleeping for 7s. Reason: RUNNING
2024-12-09 01:54:32,636 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:54:41,895 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:54:50,154 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:54:59,413 Sleeping for 9s. Reason: RUNNING
2024-12-09 01:55:08,669 Sleeping for 8s. Reason: RUNNING
2024-12-09 01:55:16,924 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:55:22,177 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:55:28,438 Sleeping for 6s. Reason: RUNNING
2024-12-09 01:55:34,703 Sleeping for 10s. Reason: RUNNING
2024-12-09 01:55:44,960 Sleeping for 5s. Reason: RUNNING
2024-12-09 01:55:52,732 Setting max_seq=508, max_extra_seq=2048
2024-12-09 01:58:53,174 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.8 pTM=0.436 ipTM=0.124
2024-12-09 01:59:06,848 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.9 pTM=0.46 ipTM=0.142 tol=11.6
2024-12-09 01:59:20,526 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.1 pTM=0.543 ipTM=0.392 tol=6.2
2024-12-09 01:59:34,254 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.5 pTM=0.516 ipTM=0.274 tol=4.43
2024-12-09 01:59:47,993 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74 pTM=0.509 ipTM=0.258 tol=2.67
2024-12-09 02:00:01,747 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.6 pTM=0.533 ipTM=0.315 tol=2.03
2024-12-09 02:00:15,505 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.2 pTM=0.521 ipTM=0.274 tol=1.62
2024-12-09 02:00:29,276 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.517 ipTM=0.257 tol=0.799
2024-12-09 02:00:43,039 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.8 pTM=0.513 ipTM=0.251 tol=0.744
2024-12-09 02:00:56,820 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.8 pTM=0.513 ipTM=0.243 tol=0.83
2024-12-09 02:01:10,605 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.8 pTM=0.512 ipTM=0.244 tol=0.779
2024-12-09 02:01:24,403 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.7 pTM=0.515 ipTM=0.249 tol=2.02
2024-12-09 02:01:38,196 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.1 pTM=0.521 ipTM=0.256 tol=1.31
2024-12-09 02:01:51,994 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.6 pTM=0.512 ipTM=0.246 tol=1.35
2024-12-09 02:02:05,791 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.1 pTM=0.521 ipTM=0.272 tol=1.31
2024-12-09 02:02:19,596 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.6 pTM=0.514 ipTM=0.245 tol=0.998
2024-12-09 02:02:33,402 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.9 pTM=0.517 ipTM=0.255 tol=1.28
2024-12-09 02:02:47,208 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.7 pTM=0.519 ipTM=0.256 tol=1.72
2024-12-09 02:03:01,015 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.6 pTM=0.546 ipTM=0.324 tol=3.01
2024-12-09 02:03:14,821 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.5 pTM=0.521 ipTM=0.267 tol=2.61
2024-12-09 02:03:28,631 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.1 pTM=0.512 ipTM=0.249 tol=1.12
2024-12-09 02:03:42,442 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.8 pTM=0.527 ipTM=0.27 tol=1.47
2024-12-09 02:03:56,253 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.7 pTM=0.52 ipTM=0.254 tol=0.969
2024-12-09 02:04:10,079 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.2 pTM=0.526 ipTM=0.272 tol=1.02
2024-12-09 02:04:23,902 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.5 pTM=0.51 ipTM=0.239 tol=1.45
2024-12-09 02:04:37,717 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.1 pTM=0.523 ipTM=0.27 tol=0.8
2024-12-09 02:04:51,538 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.6 pTM=0.511 ipTM=0.243 tol=1.01
2024-12-09 02:05:05,347 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.4 pTM=0.516 ipTM=0.255 tol=0.961
2024-12-09 02:05:19,170 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.6 pTM=0.514 ipTM=0.249 tol=0.79
2024-12-09 02:05:32,983 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.3 pTM=0.51 ipTM=0.238 tol=0.66
2024-12-09 02:05:46,803 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.6 pTM=0.533 ipTM=0.288 tol=1.27
2024-12-09 02:05:46,804 alphafold2_multimer_v3_model_1_seed_000 took 588.2s (30 recycles)
2024-12-09 02:06:01,045 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.2 pTM=0.48 ipTM=0.211
2024-12-09 02:06:14,913 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.8 pTM=0.487 ipTM=0.196 tol=8.76
2024-12-09 02:06:28,786 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.1 pTM=0.488 ipTM=0.19 tol=6.9
2024-12-09 02:06:42,669 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.8 pTM=0.49 ipTM=0.19 tol=7.22
2024-12-09 02:06:56,537 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.6 pTM=0.49 ipTM=0.19 tol=2.37
2024-12-09 02:07:10,407 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.6 pTM=0.49 ipTM=0.192 tol=3.44
2024-12-09 02:07:24,265 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.1 pTM=0.541 ipTM=0.348 tol=3.44
2024-12-09 02:07:38,126 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=75.1 pTM=0.543 ipTM=0.346 tol=2.06
2024-12-09 02:07:51,983 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.4 pTM=0.537 ipTM=0.336 tol=1.22
2024-12-09 02:08:05,841 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.6 pTM=0.534 ipTM=0.325 tol=1.2
2024-12-09 02:08:19,700 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.5 pTM=0.533 ipTM=0.324 tol=0.576
2024-12-09 02:08:33,551 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.4 pTM=0.531 ipTM=0.323 tol=0.821
2024-12-09 02:08:47,415 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.3 pTM=0.527 ipTM=0.311 tol=0.436
2024-12-09 02:08:47,416 alphafold2_multimer_v3_model_2_seed_000 took 180.2s (12 recycles)
2024-12-09 02:09:01,770 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.6 pTM=0.447 ipTM=0.106
2024-12-09 02:09:15,662 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.2 pTM=0.472 ipTM=0.153 tol=18.4
2024-12-09 02:09:29,553 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.1 pTM=0.472 ipTM=0.147 tol=5.11
2024-12-09 02:09:43,437 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.486 ipTM=0.181 tol=4.37
2024-12-09 02:09:57,322 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.2 pTM=0.487 ipTM=0.185 tol=2.46
2024-12-09 02:10:11,210 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.7 pTM=0.488 ipTM=0.182 tol=1.88
2024-12-09 02:10:25,091 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.1 pTM=0.491 ipTM=0.199 tol=2.04
2024-12-09 02:10:38,978 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.2 pTM=0.492 ipTM=0.196 tol=2.29
2024-12-09 02:10:52,860 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.2 pTM=0.49 ipTM=0.193 tol=2.21
2024-12-09 02:11:06,721 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.491 ipTM=0.194 tol=1.8
2024-12-09 02:11:20,613 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.4 pTM=0.493 ipTM=0.199 tol=2.65
2024-12-09 02:11:34,506 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.2 pTM=0.492 ipTM=0.195 tol=2.36
2024-12-09 02:11:48,392 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.4 pTM=0.491 ipTM=0.198 tol=2.16
2024-12-09 02:12:02,271 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.5 pTM=0.489 ipTM=0.189 tol=2.18
2024-12-09 02:12:16,151 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.6 pTM=0.493 ipTM=0.198 tol=2.22
2024-12-09 02:12:30,015 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.3 pTM=0.491 ipTM=0.186 tol=3.21
2024-12-09 02:12:43,882 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.6 pTM=0.493 ipTM=0.198 tol=2.99
2024-12-09 02:12:57,757 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.8 pTM=0.492 ipTM=0.193 tol=2.22
2024-12-09 02:13:11,649 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72 pTM=0.494 ipTM=0.196 tol=2.32
2024-12-09 02:13:25,525 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.3 pTM=0.49 ipTM=0.184 tol=3.05
2024-12-09 02:13:39,391 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.2 pTM=0.49 ipTM=0.194 tol=2.9
2024-12-09 02:13:53,267 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.7 pTM=0.49 ipTM=0.189 tol=1.82
2024-12-09 02:14:07,167 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.6 pTM=0.495 ipTM=0.193 tol=1.19
2024-12-09 02:14:21,047 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.8 pTM=0.492 ipTM=0.191 tol=1.32
2024-12-09 02:14:34,910 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.1 pTM=0.491 ipTM=0.185 tol=1.83
2024-12-09 02:14:48,783 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.1 pTM=0.49 ipTM=0.186 tol=0.641
2024-12-09 02:15:02,683 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.8 pTM=0.488 ipTM=0.18 tol=2.63
2024-12-09 02:15:16,552 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.8 pTM=0.489 ipTM=0.178 tol=3.24
2024-12-09 02:15:30,423 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.7 pTM=0.491 ipTM=0.184 tol=1.52
2024-12-09 02:15:44,304 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.6 pTM=0.49 ipTM=0.183 tol=2.89
2024-12-09 02:15:58,193 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.1 pTM=0.49 ipTM=0.184 tol=2.24
2024-12-09 02:15:58,194 alphafold2_multimer_v3_model_3_seed_000 took 430.4s (30 recycles)
2024-12-09 02:16:12,466 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.4 pTM=0.449 ipTM=0.167
2024-12-09 02:16:26,334 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.8 pTM=0.48 ipTM=0.173 tol=8.55
2024-12-09 02:16:40,202 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.5 pTM=0.499 ipTM=0.194 tol=13.1
2024-12-09 02:16:54,075 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.1 pTM=0.496 ipTM=0.193 tol=6.25
2024-12-09 02:17:07,960 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.4 pTM=0.497 ipTM=0.189 tol=7.5
2024-12-09 02:17:21,847 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.4 pTM=0.503 ipTM=0.2 tol=3.93
2024-12-09 02:17:35,728 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.1 pTM=0.505 ipTM=0.207 tol=5.03
2024-12-09 02:17:49,603 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.2 pTM=0.495 ipTM=0.185 tol=3.06
2024-12-09 02:18:03,483 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.4 pTM=0.5 ipTM=0.197 tol=4.32
2024-12-09 02:18:17,379 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.8 pTM=0.501 ipTM=0.196 tol=4.71
2024-12-09 02:18:31,273 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.5 pTM=0.501 ipTM=0.197 tol=2.28
2024-12-09 02:18:45,140 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.1 pTM=0.501 ipTM=0.198 tol=1.97
2024-12-09 02:18:59,023 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.6 pTM=0.504 ipTM=0.196 tol=3.28
2024-12-09 02:19:12,901 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.499 ipTM=0.194 tol=1.48
2024-12-09 02:19:26,803 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.4 pTM=0.505 ipTM=0.203 tol=2.09
2024-12-09 02:19:40,686 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.9 pTM=0.5 ipTM=0.191 tol=2.48
2024-12-09 02:19:54,576 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.7 pTM=0.503 ipTM=0.198 tol=1.77
2024-12-09 02:20:08,477 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.7 pTM=0.5 ipTM=0.193 tol=5.52
2024-12-09 02:20:22,360 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.2 pTM=0.504 ipTM=0.195 tol=3.75
2024-12-09 02:20:36,229 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.1 pTM=0.503 ipTM=0.202 tol=3.3
2024-12-09 02:20:50,107 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.3 pTM=0.502 ipTM=0.203 tol=3.07
2024-12-09 02:21:03,994 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.8 pTM=0.507 ipTM=0.201 tol=2.74
2024-12-09 02:21:17,873 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.4 pTM=0.506 ipTM=0.204 tol=2.75
2024-12-09 02:21:31,756 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.1 pTM=0.501 ipTM=0.193 tol=3.1
2024-12-09 02:21:45,626 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.2 pTM=0.504 ipTM=0.2 tol=3.04
2024-12-09 02:21:59,503 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.1 pTM=0.501 ipTM=0.2 tol=1.41
2024-12-09 02:22:13,404 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.508 ipTM=0.203 tol=2.71
2024-12-09 02:22:27,303 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.2 pTM=0.5 ipTM=0.189 tol=4.48
2024-12-09 02:22:41,195 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.5 pTM=0.502 ipTM=0.197 tol=4.56
2024-12-09 02:22:55,086 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.2 pTM=0.502 ipTM=0.199 tol=3.1
2024-12-09 02:23:08,982 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.6 pTM=0.504 ipTM=0.2 tol=3.96
2024-12-09 02:23:08,983 alphafold2_multimer_v3_model_4_seed_000 took 430.4s (30 recycles)
2024-12-09 02:23:23,270 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.2 pTM=0.45 ipTM=0.138
2024-12-09 02:23:37,158 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.7 pTM=0.474 ipTM=0.133 tol=6.71
2024-12-09 02:23:51,054 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.8 pTM=0.47 ipTM=0.127 tol=7.69
2024-12-09 02:24:04,953 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.9 pTM=0.482 ipTM=0.148 tol=2.45
2024-12-09 02:24:18,846 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.6 pTM=0.483 ipTM=0.153 tol=3.92
2024-12-09 02:24:32,727 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.8 pTM=0.485 ipTM=0.153 tol=3.15
2024-12-09 02:24:46,610 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.8 pTM=0.482 ipTM=0.148 tol=2.72
2024-12-09 02:25:00,482 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.8 pTM=0.486 ipTM=0.155 tol=1.63
2024-12-09 02:25:14,364 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.8 pTM=0.485 ipTM=0.157 tol=1.66
2024-12-09 02:25:28,237 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.1 pTM=0.489 ipTM=0.162 tol=1.6
2024-12-09 02:25:42,126 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.1 pTM=0.489 ipTM=0.157 tol=1.53
2024-12-09 02:25:56,011 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.8 pTM=0.489 ipTM=0.159 tol=1.84
2024-12-09 02:26:09,891 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.8 pTM=0.488 ipTM=0.158 tol=1.88
2024-12-09 02:26:23,779 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71 pTM=0.487 ipTM=0.156 tol=2.2
2024-12-09 02:26:37,661 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.1 pTM=0.49 ipTM=0.162 tol=6.05
2024-12-09 02:26:51,554 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.1 pTM=0.49 ipTM=0.158 tol=6.36
2024-12-09 02:27:05,426 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71 pTM=0.488 ipTM=0.16 tol=3.32
2024-12-09 02:27:19,320 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.2 pTM=0.489 ipTM=0.158 tol=2.32
2024-12-09 02:27:33,209 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.2 pTM=0.491 ipTM=0.156 tol=1.88
2024-12-09 02:27:47,105 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.4 pTM=0.487 ipTM=0.152 tol=1.78
2024-12-09 02:28:00,986 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.6 pTM=0.485 ipTM=0.156 tol=3.53
2024-12-09 02:28:14,884 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.4 pTM=0.49 ipTM=0.155 tol=5.56
2024-12-09 02:28:28,779 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.4 pTM=0.488 ipTM=0.15 tol=3.57
2024-12-09 02:28:42,669 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.5 pTM=0.486 ipTM=0.152 tol=3.25
2024-12-09 02:28:56,548 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.2 pTM=0.483 ipTM=0.146 tol=1.28
2024-12-09 02:29:10,428 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.4 pTM=0.483 ipTM=0.148 tol=1.97
2024-12-09 02:29:24,311 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.1 pTM=0.487 ipTM=0.153 tol=2.07
2024-12-09 02:29:38,199 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.1 pTM=0.485 ipTM=0.151 tol=1.94
2024-12-09 02:29:52,071 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.9 pTM=0.486 ipTM=0.156 tol=2.29
2024-12-09 02:30:05,948 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.9 pTM=0.487 ipTM=0.157 tol=2.63
2024-12-09 02:30:19,824 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.1 pTM=0.486 ipTM=0.154 tol=2.64
2024-12-09 02:30:19,825 alphafold2_multimer_v3_model_5_seed_000 took 430.4s (30 recycles)
2024-12-09 02:30:20,222 reranking models by 'multimer' metric
2024-12-09 02:30:22,142 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 02:31:03,758 Relaxation took 43.5s
2024-12-09 02:31:03,758 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.3 pTM=0.527 ipTM=0.311
2024-12-09 02:31:27,155 Relaxation took 23.4s
2024-12-09 02:31:27,155 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.6 pTM=0.533 ipTM=0.288
2024-12-09 02:32:29,854 Relaxation took 62.7s
2024-12-09 02:32:29,855 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.6 pTM=0.504 ipTM=0.2
2024-12-09 02:33:22,664 Relaxation took 52.8s
2024-12-09 02:33:22,664 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.1 pTM=0.49 ipTM=0.184
2024-12-09 02:34:16,149 Relaxation took 53.5s
2024-12-09 02:34:16,150 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.1 pTM=0.486 ipTM=0.154
2024-12-09 02:34:17,650 Done