2024-12-09 01:53:44,064 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-09 01:53:44,390 Running on GPU 2024-12-09 01:53:49,016 Found 6 citations for tools or databases 2024-12-09 01:53:49,016 Query 1/1: TRIM35_TRIM10 (length 974) 2024-12-09 01:53:49,310 Sleeping for 9s. Reason: PENDING 2024-12-09 01:53:58,577 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:54:05,838 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:54:13,100 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:54:20,357 Sleeping for 9s. Reason: RUNNING 2024-12-09 01:54:29,620 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:54:34,881 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:54:41,134 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:54:49,390 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:54:59,658 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:55:07,917 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:55:13,172 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:55:21,434 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:55:31,696 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:55:37,953 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:55:45,211 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:55:55,472 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:56:01,727 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:56:09,994 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:56:16,251 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:56:21,505 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:56:31,763 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:56:37,020 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:56:44,279 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:56:51,533 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:56:58,790 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:57:05,047 Sleeping for 9s. Reason: RUNNING 2024-12-09 01:57:14,306 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:57:19,556 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:57:24,820 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:57:32,075 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:57:40,330 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:57:45,582 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:57:55,837 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:58:02,091 Sleeping for 7s. Reason: RUNNING 2024-12-09 01:58:09,351 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:58:17,613 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:58:30,095 Sleeping for 5s. Reason: PENDING 2024-12-09 01:58:35,348 Sleeping for 9s. Reason: RUNNING 2024-12-09 01:58:44,606 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:58:52,860 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:58:59,119 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:59:05,377 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:59:10,635 Sleeping for 8s. Reason: RUNNING 2024-12-09 01:59:18,895 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:59:25,154 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:59:30,406 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:59:36,662 Sleeping for 5s. Reason: RUNNING 2024-12-09 01:59:41,916 Sleeping for 10s. Reason: RUNNING 2024-12-09 01:59:52,182 Sleeping for 6s. Reason: RUNNING 2024-12-09 01:59:58,437 Sleeping for 8s. Reason: RUNNING 2024-12-09 02:00:06,694 Sleeping for 8s. Reason: RUNNING 2024-12-09 02:00:14,954 Sleeping for 8s. Reason: RUNNING 2024-12-09 02:00:27,446 Setting max_seq=508, max_extra_seq=2048 2024-12-09 02:03:17,731 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.9 pTM=0.525 ipTM=0.598 2024-12-09 02:03:37,751 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.1 pTM=0.49 ipTM=0.551 tol=17.6 2024-12-09 02:03:57,829 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73 pTM=0.452 ipTM=0.501 tol=2.21 2024-12-09 02:04:17,933 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.9 pTM=0.45 ipTM=0.494 tol=1.71 2024-12-09 02:04:38,057 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.2 pTM=0.447 ipTM=0.486 tol=1.57 2024-12-09 02:04:58,212 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.3 pTM=0.438 ipTM=0.468 tol=1.93 2024-12-09 02:05:18,387 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.2 pTM=0.431 ipTM=0.455 tol=1.26 2024-12-09 02:05:38,565 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.3 pTM=0.443 ipTM=0.471 tol=1.95 2024-12-09 02:05:58,751 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.1 pTM=0.443 ipTM=0.471 tol=1.37 2024-12-09 02:06:18,958 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.8 pTM=0.433 ipTM=0.455 tol=5.85 2024-12-09 02:06:39,165 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.4 pTM=0.425 ipTM=0.439 tol=1.79 2024-12-09 02:06:59,364 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.4 pTM=0.435 ipTM=0.462 tol=0.818 2024-12-09 02:07:19,569 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.6 pTM=0.437 ipTM=0.464 tol=3.81 2024-12-09 02:07:39,775 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.2 pTM=0.426 ipTM=0.444 tol=3.2 2024-12-09 02:07:59,985 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.5 pTM=0.42 ipTM=0.431 tol=4.23 2024-12-09 02:08:20,197 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.7 pTM=0.426 ipTM=0.44 tol=1.74 2024-12-09 02:08:40,402 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.2 pTM=0.429 ipTM=0.446 tol=4.16 2024-12-09 02:09:00,644 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.9 pTM=0.437 ipTM=0.459 tol=1.4 2024-12-09 02:09:20,923 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.8 pTM=0.437 ipTM=0.461 tol=0.723 2024-12-09 02:09:41,167 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.3 pTM=0.414 ipTM=0.418 tol=3.15 2024-12-09 02:10:01,437 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.4 pTM=0.414 ipTM=0.421 tol=1.54 2024-12-09 02:10:21,701 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.3 pTM=0.427 ipTM=0.441 tol=2.28 2024-12-09 02:10:41,942 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.4 pTM=0.422 ipTM=0.434 tol=1.76 2024-12-09 02:11:02,227 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.7 pTM=0.397 ipTM=0.394 tol=0.996 2024-12-09 02:11:22,479 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.4 pTM=0.415 ipTM=0.422 tol=0.908 2024-12-09 02:11:42,726 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.9 pTM=0.422 ipTM=0.432 tol=2.01 2024-12-09 02:12:02,990 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.1 pTM=0.42 ipTM=0.435 tol=1.91 2024-12-09 02:12:23,242 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.6 pTM=0.397 ipTM=0.394 tol=2.14 2024-12-09 02:12:43,459 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.2 pTM=0.416 ipTM=0.421 tol=1.72 2024-12-09 02:13:03,696 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.6 pTM=0.406 ipTM=0.407 tol=0.797 2024-12-09 02:13:23,912 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.4 pTM=0.421 ipTM=0.43 tol=1.12 2024-12-09 02:13:23,913 alphafold2_multimer_v3_model_1_seed_000 took 770.5s (30 recycles) 2024-12-09 02:13:44,739 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.1 pTM=0.53 ipTM=0.583 2024-12-09 02:14:04,990 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.6 pTM=0.491 ipTM=0.554 tol=14.4 2024-12-09 02:14:25,229 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.5 pTM=0.483 ipTM=0.542 tol=2.72 2024-12-09 02:14:45,495 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.3 pTM=0.464 ipTM=0.521 tol=2.57 2024-12-09 02:15:05,787 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.5 pTM=0.46 ipTM=0.518 tol=1.75 2024-12-09 02:15:26,046 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72 pTM=0.452 ipTM=0.505 tol=1.14 2024-12-09 02:15:46,300 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.1 pTM=0.479 ipTM=0.534 tol=1.86 2024-12-09 02:16:06,581 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.4 pTM=0.46 ipTM=0.51 tol=1.95 2024-12-09 02:16:26,804 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74 pTM=0.479 ipTM=0.533 tol=1.5 2024-12-09 02:16:47,064 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.2 pTM=0.458 ipTM=0.505 tol=3.67 2024-12-09 02:17:07,316 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.2 pTM=0.468 ipTM=0.521 tol=1.77 2024-12-09 02:17:27,555 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.4 pTM=0.448 ipTM=0.498 tol=2.2 2024-12-09 02:17:47,816 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.7 pTM=0.457 ipTM=0.504 tol=1.23 2024-12-09 02:18:08,078 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.1 pTM=0.444 ipTM=0.492 tol=1.47 2024-12-09 02:18:28,302 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.9 pTM=0.46 ipTM=0.509 tol=1.91 2024-12-09 02:18:48,530 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.9 pTM=0.441 ipTM=0.486 tol=1.34 2024-12-09 02:19:08,732 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.9 pTM=0.481 ipTM=0.538 tol=2.67 2024-12-09 02:19:28,948 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.454 ipTM=0.504 tol=1.76 2024-12-09 02:19:49,172 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.1 pTM=0.467 ipTM=0.529 tol=1.79 2024-12-09 02:20:09,377 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.6 pTM=0.469 ipTM=0.532 tol=1.91 2024-12-09 02:20:29,603 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.1 pTM=0.461 ipTM=0.524 tol=0.506 2024-12-09 02:20:49,894 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.5 pTM=0.47 ipTM=0.53 tol=2.66 2024-12-09 02:21:10,156 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73 pTM=0.459 ipTM=0.517 tol=1.58 2024-12-09 02:21:30,386 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.2 pTM=0.49 ipTM=0.555 tol=2.45 2024-12-09 02:21:50,647 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.2 pTM=0.462 ipTM=0.521 tol=1.07 2024-12-09 02:22:10,902 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.4 pTM=0.472 ipTM=0.525 tol=2.31 2024-12-09 02:22:31,160 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.8 pTM=0.453 ipTM=0.503 tol=3.15 2024-12-09 02:22:51,420 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.6 pTM=0.486 ipTM=0.551 tol=2.92 2024-12-09 02:23:11,659 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.1 pTM=0.461 ipTM=0.516 tol=1.45 2024-12-09 02:23:31,908 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.9 pTM=0.483 ipTM=0.546 tol=2.64 2024-12-09 02:23:52,161 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.4 pTM=0.469 ipTM=0.53 tol=1.24 2024-12-09 02:23:52,162 alphafold2_multimer_v3_model_2_seed_000 took 627.7s (30 recycles) 2024-12-09 02:24:12,922 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.4 pTM=0.506 ipTM=0.574 2024-12-09 02:24:33,092 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.1 pTM=0.489 ipTM=0.545 tol=8.59 2024-12-09 02:24:53,273 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.1 pTM=0.449 ipTM=0.488 tol=1.57 2024-12-09 02:25:13,440 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.4 pTM=0.474 ipTM=0.524 tol=1.24 2024-12-09 02:25:33,619 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.4 pTM=0.464 ipTM=0.512 tol=0.705 2024-12-09 02:25:53,785 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.8 pTM=0.485 ipTM=0.53 tol=1.03 2024-12-09 02:26:13,962 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.4 pTM=0.46 ipTM=0.507 tol=1.28 2024-12-09 02:26:34,148 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.475 ipTM=0.524 tol=1.02 2024-12-09 02:26:54,329 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.9 pTM=0.47 ipTM=0.519 tol=0.835 2024-12-09 02:27:14,501 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.8 pTM=0.478 ipTM=0.526 tol=0.711 2024-12-09 02:27:34,688 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.6 pTM=0.466 ipTM=0.519 tol=0.626 2024-12-09 02:27:54,866 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.4 pTM=0.476 ipTM=0.526 tol=0.541 2024-12-09 02:28:15,065 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.6 pTM=0.471 ipTM=0.518 tol=0.95 2024-12-09 02:28:35,298 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.3 pTM=0.472 ipTM=0.519 tol=0.777 2024-12-09 02:28:55,494 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.5 pTM=0.462 ipTM=0.508 tol=0.456 2024-12-09 02:28:55,495 alphafold2_multimer_v3_model_3_seed_000 took 302.7s (14 recycles) 2024-12-09 02:29:16,347 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.459 ipTM=0.518 2024-12-09 02:29:36,590 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.9 pTM=0.467 ipTM=0.52 tol=17 2024-12-09 02:29:56,808 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.9 pTM=0.468 ipTM=0.512 tol=12.1 2024-12-09 02:30:17,063 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.4 pTM=0.457 ipTM=0.5 tol=2.48 2024-12-09 02:30:37,289 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.8 pTM=0.472 ipTM=0.516 tol=2.27 2024-12-09 02:30:57,546 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.9 pTM=0.461 ipTM=0.505 tol=1.78 2024-12-09 02:31:17,814 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.4 pTM=0.477 ipTM=0.53 tol=1.43 2024-12-09 02:31:38,020 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.7 pTM=0.482 ipTM=0.535 tol=4.74 2024-12-09 02:31:58,245 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.2 pTM=0.485 ipTM=0.531 tol=3.6 2024-12-09 02:32:18,454 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.4 pTM=0.499 ipTM=0.55 tol=2.82 2024-12-09 02:32:38,635 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.8 pTM=0.476 ipTM=0.528 tol=1.42 2024-12-09 02:32:58,815 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74.4 pTM=0.473 ipTM=0.522 tol=1.59 2024-12-09 02:33:18,975 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.9 pTM=0.48 ipTM=0.527 tol=1.5 2024-12-09 02:33:39,123 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.7 pTM=0.475 ipTM=0.521 tol=1.62 2024-12-09 02:33:59,289 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.6 pTM=0.468 ipTM=0.51 tol=1.43 2024-12-09 02:34:19,454 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.9 pTM=0.486 ipTM=0.528 tol=1.89 2024-12-09 02:34:39,660 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.3 pTM=0.465 ipTM=0.503 tol=1.56 2024-12-09 02:34:59,803 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.4 pTM=0.494 ipTM=0.535 tol=1.07 2024-12-09 02:35:19,988 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.8 pTM=0.469 ipTM=0.504 tol=1.41 2024-12-09 02:35:40,179 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.2 pTM=0.493 ipTM=0.539 tol=1.53 2024-12-09 02:36:00,330 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.8 pTM=0.473 ipTM=0.51 tol=1.56 2024-12-09 02:36:20,514 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74.9 pTM=0.482 ipTM=0.525 tol=1.05 2024-12-09 02:36:40,709 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.6 pTM=0.485 ipTM=0.524 tol=0.987 2024-12-09 02:37:00,862 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.2 pTM=0.487 ipTM=0.528 tol=1.18 2024-12-09 02:37:21,004 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=74.9 pTM=0.479 ipTM=0.517 tol=0.862 2024-12-09 02:37:41,145 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.8 pTM=0.484 ipTM=0.523 tol=1.27 2024-12-09 02:38:01,348 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74.8 pTM=0.473 ipTM=0.514 tol=1.63 2024-12-09 02:38:21,561 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.7 pTM=0.483 ipTM=0.527 tol=1.27 2024-12-09 02:38:41,745 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.9 pTM=0.489 ipTM=0.54 tol=0.832 2024-12-09 02:39:01,952 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.5 pTM=0.472 ipTM=0.517 tol=2.09 2024-12-09 02:39:22,154 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.2 pTM=0.491 ipTM=0.545 tol=1.95 2024-12-09 02:39:22,155 alphafold2_multimer_v3_model_4_seed_000 took 626.1s (30 recycles) 2024-12-09 02:39:43,004 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.2 pTM=0.472 ipTM=0.525 2024-12-09 02:40:03,249 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72 pTM=0.473 ipTM=0.533 tol=15.1 2024-12-09 02:40:23,466 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.9 pTM=0.473 ipTM=0.526 tol=6.11 2024-12-09 02:40:43,717 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.9 pTM=0.466 ipTM=0.511 tol=4.43 2024-12-09 02:41:03,972 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.6 pTM=0.46 ipTM=0.503 tol=1.31 2024-12-09 02:41:24,200 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.2 pTM=0.475 ipTM=0.519 tol=2.53 2024-12-09 02:41:44,430 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.9 pTM=0.46 ipTM=0.507 tol=2.1 2024-12-09 02:42:04,649 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.3 pTM=0.472 ipTM=0.518 tol=1.24 2024-12-09 02:42:24,870 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.4 pTM=0.471 ipTM=0.519 tol=1.07 2024-12-09 02:42:45,115 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.4 pTM=0.469 ipTM=0.514 tol=2.26 2024-12-09 02:43:05,314 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.5 pTM=0.479 ipTM=0.528 tol=1.72 2024-12-09 02:43:25,542 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.4 pTM=0.473 ipTM=0.516 tol=1.51 2024-12-09 02:43:45,738 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.1 pTM=0.471 ipTM=0.518 tol=1.88 2024-12-09 02:44:05,942 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.4 pTM=0.472 ipTM=0.514 tol=2.22 2024-12-09 02:44:26,153 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.2 pTM=0.475 ipTM=0.521 tol=1.42 2024-12-09 02:44:46,337 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.4 pTM=0.477 ipTM=0.522 tol=1.41 2024-12-09 02:45:06,558 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.9 pTM=0.465 ipTM=0.507 tol=1.02 2024-12-09 02:45:26,761 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.7 pTM=0.485 ipTM=0.533 tol=1.49 2024-12-09 02:45:46,983 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=73.4 pTM=0.475 ipTM=0.522 tol=1.41 2024-12-09 02:46:07,184 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.5 pTM=0.478 ipTM=0.525 tol=1.23 2024-12-09 02:46:27,400 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=73.1 pTM=0.469 ipTM=0.517 tol=1.83 2024-12-09 02:46:47,620 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.8 pTM=0.489 ipTM=0.537 tol=1.43 2024-12-09 02:47:07,811 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.3 pTM=0.485 ipTM=0.526 tol=1.45 2024-12-09 02:47:27,956 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.9 pTM=0.482 ipTM=0.524 tol=1.25 2024-12-09 02:47:48,110 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.8 pTM=0.479 ipTM=0.519 tol=1.17 2024-12-09 02:48:08,257 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.1 pTM=0.492 ipTM=0.543 tol=1.61 2024-12-09 02:48:28,415 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.9 pTM=0.48 ipTM=0.523 tol=1.85 2024-12-09 02:48:48,573 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.8 pTM=0.484 ipTM=0.531 tol=1.86 2024-12-09 02:49:08,736 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73.9 pTM=0.479 ipTM=0.524 tol=1.1 2024-12-09 02:49:28,905 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.9 pTM=0.483 ipTM=0.532 tol=1.41 2024-12-09 02:49:49,078 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.1 pTM=0.482 ipTM=0.53 tol=1.29 2024-12-09 02:49:49,078 alphafold2_multimer_v3_model_5_seed_000 took 626.3s (30 recycles) 2024-12-09 02:49:49,665 reranking models by 'multimer' metric 2024-12-09 02:49:52,943 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-09 02:51:12,239 Relaxation took 82.6s 2024-12-09 02:51:12,239 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.2 pTM=0.491 ipTM=0.545 2024-12-09 02:52:49,534 Relaxation took 97.3s 2024-12-09 02:52:49,535 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.1 pTM=0.482 ipTM=0.53 2024-12-09 02:53:24,221 Relaxation took 34.7s 2024-12-09 02:53:24,221 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.4 pTM=0.469 ipTM=0.53 2024-12-09 02:54:08,739 Relaxation took 44.5s 2024-12-09 02:54:08,739 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.5 pTM=0.462 ipTM=0.508 2024-12-09 02:55:02,612 Relaxation took 53.9s 2024-12-09 02:55:02,612 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.4 pTM=0.421 ipTM=0.43 2024-12-09 02:55:04,467 Done