2024-12-09 02:27:45,221 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 02:27:45,537 Running on GPU
2024-12-09 02:27:48,849 Found 6 citations for tools or databases
2024-12-09 02:27:48,849 Query 1/1: TRIM37_KRT2 (length 1603)
2024-12-09 02:27:49,227 Sleeping for 9s. Reason: PENDING
2024-12-09 02:27:58,480 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:28:08,738 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:28:18,997 Sleeping for 6s. Reason: RUNNING
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2024-12-09 02:28:34,514 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:28:41,771 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:28:51,045 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:28:56,295 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:29:01,548 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:29:10,806 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:29:16,057 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:29:22,310 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:29:28,569 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:29:35,824 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:29:42,077 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:29:50,340 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:29:57,602 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:30:04,868 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:30:12,136 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:30:25,833 Sleeping for 9s. Reason: PENDING
2024-12-09 02:30:35,092 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:30:45,355 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:30:51,759 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:30:58,019 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:31:03,271 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:31:12,530 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:31:20,786 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:31:31,043 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:31:38,295 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:31:46,554 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:31:51,809 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:31:59,070 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:32:05,327 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:32:11,588 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:32:21,850 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:32:27,104 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:32:38,085 Setting max_seq=508, max_extra_seq=2048
2024-12-09 02:36:41,788 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.7 pTM=0.302 ipTM=0.159
2024-12-09 02:38:01,442 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.4 pTM=0.309 ipTM=0.165 tol=22.2
2024-12-09 02:39:21,284 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=43.5 pTM=0.311 ipTM=0.166 tol=11.8
2024-12-09 02:40:41,179 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=43 pTM=0.308 ipTM=0.164 tol=9.13
2024-12-09 02:42:01,107 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=43.4 pTM=0.309 ipTM=0.164 tol=7.7
2024-12-09 02:43:21,000 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=43.1 pTM=0.307 ipTM=0.165 tol=4.91
2024-12-09 02:44:40,880 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=43 pTM=0.306 ipTM=0.163 tol=6.86
2024-12-09 02:46:00,712 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=43.4 pTM=0.308 ipTM=0.163 tol=5.53
2024-12-09 02:47:20,524 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=43.4 pTM=0.307 ipTM=0.161 tol=6.79
2024-12-09 02:48:40,324 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=43.5 pTM=0.307 ipTM=0.162 tol=5.98
2024-12-09 02:50:00,206 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=43.2 pTM=0.306 ipTM=0.162 tol=5.87
2024-12-09 02:51:20,109 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=43.3 pTM=0.307 ipTM=0.161 tol=5.78
2024-12-09 02:52:40,048 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=43.6 pTM=0.306 ipTM=0.162 tol=7.78
2024-12-09 02:53:59,994 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=43.6 pTM=0.306 ipTM=0.162 tol=6.9
2024-12-09 02:55:19,890 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=43.6 pTM=0.306 ipTM=0.162 tol=6.65
2024-12-09 02:56:39,798 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=43.6 pTM=0.305 ipTM=0.163 tol=6.64
2024-12-09 02:57:59,737 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=43.8 pTM=0.307 ipTM=0.163 tol=4.57
2024-12-09 02:59:19,689 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=43.5 pTM=0.306 ipTM=0.163 tol=4.59
2024-12-09 03:00:39,617 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=43.7 pTM=0.307 ipTM=0.164 tol=4.05
2024-12-09 03:01:59,531 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=43.5 pTM=0.307 ipTM=0.163 tol=4.66
2024-12-09 03:03:19,456 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=43.6 pTM=0.306 ipTM=0.163 tol=6.4
2024-12-09 03:04:39,403 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=43.4 pTM=0.307 ipTM=0.163 tol=6.73
2024-12-09 03:05:59,336 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=43.4 pTM=0.307 ipTM=0.163 tol=5.76
2024-12-09 03:07:19,237 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=43.3 pTM=0.307 ipTM=0.163 tol=5.15
2024-12-09 03:08:39,117 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=43.8 pTM=0.306 ipTM=0.164 tol=5.79
2024-12-09 03:09:59,035 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=43.4 pTM=0.306 ipTM=0.162 tol=9.06
2024-12-09 03:11:18,952 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=43.3 pTM=0.308 ipTM=0.162 tol=6.07
2024-12-09 03:12:38,874 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=43.2 pTM=0.307 ipTM=0.163 tol=7.97
2024-12-09 03:13:58,807 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=43.7 pTM=0.306 ipTM=0.162 tol=7.2
2024-12-09 03:15:18,736 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=43.5 pTM=0.308 ipTM=0.163 tol=4.02
2024-12-09 03:16:38,683 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=43.4 pTM=0.308 ipTM=0.164 tol=4.91
2024-12-09 03:16:38,684 alphafold2_multimer_v3_model_1_seed_000 took 2635.0s (30 recycles)
2024-12-09 03:18:00,148 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.3 pTM=0.297 ipTM=0.168
2024-12-09 03:19:20,235 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=42.5 pTM=0.303 ipTM=0.171 tol=22.2
2024-12-09 03:20:40,249 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=42.8 pTM=0.308 ipTM=0.176 tol=15.1
2024-12-09 03:22:00,206 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.5 pTM=0.31 ipTM=0.177 tol=11.8
2024-12-09 03:23:20,144 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.6 pTM=0.308 ipTM=0.173 tol=11.4
2024-12-09 03:24:40,042 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=42.5 pTM=0.307 ipTM=0.173 tol=10.6
2024-12-09 03:25:59,928 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=42.7 pTM=0.307 ipTM=0.172 tol=8.52
2024-12-09 03:27:19,816 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.7 pTM=0.308 ipTM=0.173 tol=8.28
2024-12-09 03:28:39,673 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.7 pTM=0.308 ipTM=0.173 tol=8.08
2024-12-09 03:29:59,628 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.5 pTM=0.306 ipTM=0.169 tol=12.5
2024-12-09 03:31:19,621 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.5 pTM=0.307 ipTM=0.171 tol=8.55
2024-12-09 03:32:39,540 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.5 pTM=0.309 ipTM=0.177 tol=9.63
2024-12-09 03:33:59,507 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.5 pTM=0.31 ipTM=0.179 tol=9.1
2024-12-09 03:35:19,502 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.8 pTM=0.308 ipTM=0.177 tol=10.9
2024-12-09 03:36:39,491 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42.6 pTM=0.308 ipTM=0.176 tol=11.1
2024-12-09 03:37:59,483 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=42.7 pTM=0.309 ipTM=0.176 tol=9.62
2024-12-09 03:39:19,399 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.7 pTM=0.309 ipTM=0.177 tol=8.69
2024-12-09 03:40:39,313 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.6 pTM=0.31 ipTM=0.176 tol=6.48
2024-12-09 03:41:59,236 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.9 pTM=0.31 ipTM=0.187 tol=6.89
2024-12-09 03:43:19,201 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.8 pTM=0.309 ipTM=0.193 tol=6.63
2024-12-09 03:44:39,197 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43 pTM=0.308 ipTM=0.181 tol=6.75
2024-12-09 03:45:59,175 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.9 pTM=0.308 ipTM=0.174 tol=6.88
2024-12-09 03:47:19,188 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.9 pTM=0.308 ipTM=0.174 tol=7.66
2024-12-09 03:48:39,149 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.1 pTM=0.309 ipTM=0.176 tol=6.18
2024-12-09 03:49:59,085 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=43.3 pTM=0.309 ipTM=0.174 tol=7.63
2024-12-09 03:51:19,073 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.1 pTM=0.308 ipTM=0.177 tol=5.25
2024-12-09 03:52:39,022 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.2 pTM=0.308 ipTM=0.181 tol=5.24
2024-12-09 03:53:58,963 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.8 pTM=0.307 ipTM=0.18 tol=8.24
2024-12-09 03:55:18,937 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=43.2 pTM=0.306 ipTM=0.174 tol=7.52
2024-12-09 03:56:38,841 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.4 pTM=0.309 ipTM=0.176 tol=5.84
2024-12-09 03:57:58,748 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=43.5 pTM=0.307 ipTM=0.175 tol=4.3
2024-12-09 03:57:58,749 alphafold2_multimer_v3_model_2_seed_000 took 2478.5s (30 recycles)
2024-12-09 03:59:20,447 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.6 pTM=0.306 ipTM=0.162
2024-12-09 04:00:40,704 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.3 pTM=0.32 ipTM=0.162 tol=27.7
2024-12-09 04:02:01,064 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=40.6 pTM=0.328 ipTM=0.167 tol=23.4
2024-12-09 04:03:21,352 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.1 pTM=0.328 ipTM=0.167 tol=15.7
2024-12-09 04:04:41,668 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.6 pTM=0.33 ipTM=0.167 tol=17.3
2024-12-09 04:06:01,951 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.1 pTM=0.33 ipTM=0.17 tol=12.8
2024-12-09 04:07:22,159 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.6 pTM=0.361 ipTM=0.377 tol=30.3
2024-12-09 04:08:42,341 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.7 pTM=0.352 ipTM=0.332 tol=15.7
2024-12-09 04:10:02,505 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44.1 pTM=0.356 ipTM=0.336 tol=13.1
2024-12-09 04:11:22,666 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=44.2 pTM=0.358 ipTM=0.34 tol=11.8
2024-12-09 04:12:42,887 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=44.3 pTM=0.359 ipTM=0.344 tol=11.3
2024-12-09 04:14:03,021 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.5 pTM=0.361 ipTM=0.343 tol=7.46
2024-12-09 04:15:23,200 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.6 pTM=0.361 ipTM=0.345 tol=6.26
2024-12-09 04:16:43,379 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.4 pTM=0.361 ipTM=0.346 tol=4.19
2024-12-09 04:18:03,527 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.3 pTM=0.358 ipTM=0.343 tol=9.8
2024-12-09 04:19:23,689 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.4 pTM=0.36 ipTM=0.343 tol=5.36
2024-12-09 04:20:43,852 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44.6 pTM=0.36 ipTM=0.349 tol=6.38
2024-12-09 04:22:04,058 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.6 pTM=0.361 ipTM=0.348 tol=10.3
2024-12-09 04:23:24,240 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.6 pTM=0.361 ipTM=0.344 tol=10.1
2024-12-09 04:24:44,410 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.5 pTM=0.358 ipTM=0.343 tol=8.59
2024-12-09 04:26:04,560 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.6 pTM=0.36 ipTM=0.343 tol=8.27
2024-12-09 04:27:24,717 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.3 pTM=0.357 ipTM=0.342 tol=3.78
2024-12-09 04:28:44,861 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.3 pTM=0.362 ipTM=0.345 tol=3.43
2024-12-09 04:30:05,014 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.5 pTM=0.359 ipTM=0.346 tol=5.65
2024-12-09 04:31:25,153 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.5 pTM=0.36 ipTM=0.346 tol=8.81
2024-12-09 04:32:45,267 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.4 pTM=0.359 ipTM=0.345 tol=8.66
2024-12-09 04:34:05,370 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.5 pTM=0.36 ipTM=0.344 tol=5.42
2024-12-09 04:35:25,421 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.5 pTM=0.36 ipTM=0.346 tol=9.06
2024-12-09 04:36:45,519 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.4 pTM=0.361 ipTM=0.345 tol=8.97
2024-12-09 04:38:05,671 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.3 pTM=0.362 ipTM=0.351 tol=5.92
2024-12-09 04:39:25,795 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.3 pTM=0.359 ipTM=0.345 tol=9.27
2024-12-09 04:39:25,797 alphafold2_multimer_v3_model_3_seed_000 took 2485.5s (30 recycles)
2024-12-09 04:40:47,903 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=39.8 pTM=0.276 ipTM=0.156
2024-12-09 04:42:08,358 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.2 pTM=0.302 ipTM=0.149 tol=22.8
2024-12-09 04:43:28,855 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.9 pTM=0.307 ipTM=0.174 tol=29.9
2024-12-09 04:44:49,141 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40.2 pTM=0.309 ipTM=0.166 tol=17.7
2024-12-09 04:46:09,399 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=40 pTM=0.308 ipTM=0.163 tol=10.1
2024-12-09 04:47:29,697 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.4 pTM=0.308 ipTM=0.154 tol=9.45
2024-12-09 04:48:50,057 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.9 pTM=0.323 ipTM=0.279 tol=37.4
2024-12-09 04:50:10,233 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42.6 pTM=0.327 ipTM=0.288 tol=12
2024-12-09 04:51:30,416 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42.7 pTM=0.328 ipTM=0.289 tol=12.4
2024-12-09 04:52:50,583 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=43.1 pTM=0.33 ipTM=0.292 tol=10.2
2024-12-09 04:54:10,802 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.9 pTM=0.327 ipTM=0.287 tol=14.8
2024-12-09 04:55:30,983 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.7 pTM=0.327 ipTM=0.294 tol=13.6
2024-12-09 04:56:51,211 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.8 pTM=0.322 ipTM=0.291 tol=8.21
2024-12-09 04:58:11,426 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42.7 pTM=0.323 ipTM=0.297 tol=9.28
2024-12-09 04:59:31,591 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43 pTM=0.322 ipTM=0.294 tol=8.39
2024-12-09 05:00:51,792 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43 pTM=0.325 ipTM=0.304 tol=8.05
2024-12-09 05:02:12,025 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43 pTM=0.324 ipTM=0.304 tol=6.31
2024-12-09 05:03:32,201 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.2 pTM=0.326 ipTM=0.31 tol=7.66
2024-12-09 05:04:52,352 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.3 pTM=0.325 ipTM=0.314 tol=6.33
2024-12-09 05:06:12,586 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.1 pTM=0.324 ipTM=0.317 tol=5.28
2024-12-09 05:07:32,801 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.2 pTM=0.325 ipTM=0.321 tol=7.56
2024-12-09 05:08:53,042 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.2 pTM=0.326 ipTM=0.326 tol=7.82
2024-12-09 05:10:13,322 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.2 pTM=0.325 ipTM=0.328 tol=5.03
2024-12-09 05:11:33,594 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.5 pTM=0.329 ipTM=0.336 tol=4.76
2024-12-09 05:12:53,918 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.2 pTM=0.325 ipTM=0.329 tol=7.58
2024-12-09 05:14:14,208 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.4 pTM=0.33 ipTM=0.337 tol=8.44
2024-12-09 05:15:34,472 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.6 pTM=0.329 ipTM=0.343 tol=10.8
2024-12-09 05:16:54,729 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.6 pTM=0.329 ipTM=0.341 tol=10.1
2024-12-09 05:18:15,010 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.5 pTM=0.329 ipTM=0.341 tol=6.02
2024-12-09 05:19:35,237 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.7 pTM=0.334 ipTM=0.345 tol=6.86
2024-12-09 05:20:55,478 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.6 pTM=0.331 ipTM=0.345 tol=8.45
2024-12-09 05:20:55,480 alphafold2_multimer_v3_model_4_seed_000 took 2488.1s (30 recycles)
2024-12-09 05:22:17,350 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41.2 pTM=0.296 ipTM=0.159
2024-12-09 05:23:37,668 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.7 pTM=0.314 ipTM=0.156 tol=21.9
2024-12-09 05:24:57,983 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.5 pTM=0.315 ipTM=0.156 tol=17.9
2024-12-09 05:26:18,273 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41.4 pTM=0.318 ipTM=0.157 tol=20.3
2024-12-09 05:27:38,598 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.8 pTM=0.318 ipTM=0.158 tol=11.8
2024-12-09 05:28:58,918 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.2 pTM=0.317 ipTM=0.158 tol=14.9
2024-12-09 05:30:19,197 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.2 pTM=0.317 ipTM=0.157 tol=11.3
2024-12-09 05:31:39,511 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.2 pTM=0.318 ipTM=0.157 tol=11.7
2024-12-09 05:32:59,822 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.1 pTM=0.317 ipTM=0.156 tol=12
2024-12-09 05:34:20,121 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.3 pTM=0.317 ipTM=0.157 tol=12.1
2024-12-09 05:35:40,391 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.2 pTM=0.318 ipTM=0.157 tol=8.02
2024-12-09 05:37:00,637 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.3 pTM=0.319 ipTM=0.159 tol=5.75
2024-12-09 05:38:20,937 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.5 pTM=0.321 ipTM=0.158 tol=5.17
2024-12-09 05:39:41,292 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.4 pTM=0.319 ipTM=0.157 tol=8.92
2024-12-09 05:41:01,699 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.3 pTM=0.319 ipTM=0.158 tol=5.87
2024-12-09 05:42:22,112 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.1 pTM=0.318 ipTM=0.158 tol=12.3
2024-12-09 05:43:42,509 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.1 pTM=0.319 ipTM=0.156 tol=10.9
2024-12-09 05:45:02,895 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.2 pTM=0.318 ipTM=0.157 tol=10.1
2024-12-09 05:46:23,290 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.4 pTM=0.317 ipTM=0.158 tol=5.82
2024-12-09 05:47:43,626 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.2 pTM=0.316 ipTM=0.156 tol=5.79
2024-12-09 05:49:03,912 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.5 pTM=0.318 ipTM=0.157 tol=5.96
2024-12-09 05:50:24,120 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42 pTM=0.32 ipTM=0.157 tol=6.54
2024-12-09 05:51:44,315 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.3 pTM=0.32 ipTM=0.156 tol=6.43
2024-12-09 05:53:04,560 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.2 pTM=0.32 ipTM=0.157 tol=5.74
2024-12-09 05:54:24,870 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.6 pTM=0.34 ipTM=0.273 tol=27.3
2024-12-09 05:55:45,050 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.5 pTM=0.346 ipTM=0.282 tol=15.7
2024-12-09 05:57:05,204 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.7 pTM=0.349 ipTM=0.286 tol=8.84
2024-12-09 05:58:25,345 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.6 pTM=0.35 ipTM=0.292 tol=8.57
2024-12-09 05:59:45,455 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.8 pTM=0.352 ipTM=0.294 tol=13.4
2024-12-09 06:01:05,551 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.9 pTM=0.353 ipTM=0.292 tol=8.31
2024-12-09 06:02:25,630 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44 pTM=0.353 ipTM=0.295 tol=8.78
2024-12-09 06:02:25,632 alphafold2_multimer_v3_model_5_seed_000 took 2488.6s (30 recycles)
2024-12-09 06:02:27,146 reranking models by 'multimer' metric
2024-12-09 06:02:28,866 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 06:05:00,790 Relaxation took 153.6s
2024-12-09 06:05:00,790 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.3 pTM=0.359 ipTM=0.345
2024-12-09 06:08:28,995 Relaxation took 208.2s
2024-12-09 06:08:28,996 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.6 pTM=0.331 ipTM=0.345
2024-12-09 06:10:46,766 Relaxation took 137.8s
2024-12-09 06:10:46,766 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44 pTM=0.353 ipTM=0.295
2024-12-09 06:13:12,941 Relaxation took 146.2s
2024-12-09 06:13:12,941 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=43.5 pTM=0.307 ipTM=0.175
2024-12-09 06:16:04,817 Relaxation took 171.9s
2024-12-09 06:16:04,817 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=43.4 pTM=0.308 ipTM=0.164
2024-12-09 06:16:08,458 Done