2024-12-09 02:28:46,623 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 02:28:46,943 Running on GPU
2024-12-09 02:28:50,299 Found 6 citations for tools or databases
2024-12-09 02:28:50,299 Query 1/1: TRIM37_NCAPH2 (length 1569)
2024-12-09 02:28:50,595 Sleeping for 7s. Reason: PENDING
2024-12-09 02:28:57,848 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:29:03,106 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:29:10,363 Sleeping for 7s. Reason: RUNNING
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2024-12-09 02:29:22,868 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:29:29,126 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:29:37,383 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:29:45,642 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:29:51,893 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:30:02,156 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:30:09,414 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:30:19,671 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:30:27,926 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:30:33,185 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:30:41,442 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:30:48,695 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:30:55,862 Sleeping for 10s. Reason: PENDING
2024-12-09 02:31:06,120 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:31:15,382 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:31:21,639 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:31:28,900 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:31:36,155 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:31:43,410 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:31:49,665 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:31:56,925 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:32:02,183 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:32:10,448 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:32:18,733 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:32:28,992 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:32:36,258 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:32:47,639 Setting max_seq=508, max_extra_seq=2048
2024-12-09 02:37:00,010 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.8 pTM=0.3 ipTM=0.17
2024-12-09 02:38:14,710 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=43.5 pTM=0.312 ipTM=0.179 tol=20
2024-12-09 02:39:29,573 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=43.8 pTM=0.318 ipTM=0.18 tol=15.9
2024-12-09 02:40:44,539 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.1 pTM=0.317 ipTM=0.177 tol=8.25
2024-12-09 02:41:59,530 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.2 pTM=0.315 ipTM=0.178 tol=8.08
2024-12-09 02:43:14,522 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.4 pTM=0.316 ipTM=0.177 tol=7.28
2024-12-09 02:44:29,519 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=44.6 pTM=0.316 ipTM=0.176 tol=9.09
2024-12-09 02:45:44,495 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=44.7 pTM=0.314 ipTM=0.176 tol=6.39
2024-12-09 02:46:59,481 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.7 pTM=0.317 ipTM=0.178 tol=5.73
2024-12-09 02:48:14,453 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.7 pTM=0.317 ipTM=0.177 tol=8.36
2024-12-09 02:49:29,406 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=44.8 pTM=0.315 ipTM=0.176 tol=8.16
2024-12-09 02:50:44,407 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.8 pTM=0.314 ipTM=0.176 tol=5.01
2024-12-09 02:51:59,395 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=44.9 pTM=0.317 ipTM=0.175 tol=3.6
2024-12-09 02:53:14,383 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.8 pTM=0.317 ipTM=0.174 tol=3.87
2024-12-09 02:54:29,348 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.8 pTM=0.317 ipTM=0.174 tol=3.56
2024-12-09 02:55:44,359 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=44.6 pTM=0.315 ipTM=0.173 tol=4.31
2024-12-09 02:56:59,298 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44.7 pTM=0.315 ipTM=0.174 tol=4.17
2024-12-09 02:58:14,284 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.7 pTM=0.315 ipTM=0.174 tol=3.08
2024-12-09 02:59:29,280 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.7 pTM=0.316 ipTM=0.173 tol=2.91
2024-12-09 03:00:44,331 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45 pTM=0.315 ipTM=0.173 tol=3.41
2024-12-09 03:01:59,296 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=44.8 pTM=0.315 ipTM=0.174 tol=2.95
2024-12-09 03:03:14,265 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45 pTM=0.316 ipTM=0.175 tol=4.06
2024-12-09 03:04:29,197 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.1 pTM=0.314 ipTM=0.172 tol=3.87
2024-12-09 03:05:44,117 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.4 pTM=0.316 ipTM=0.175 tol=4.03
2024-12-09 03:06:59,096 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.2 pTM=0.316 ipTM=0.174 tol=4.01
2024-12-09 03:08:14,081 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.2 pTM=0.317 ipTM=0.174 tol=3.4
2024-12-09 03:09:29,044 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.1 pTM=0.316 ipTM=0.175 tol=3.25
2024-12-09 03:10:44,015 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.4 pTM=0.315 ipTM=0.173 tol=3.3
2024-12-09 03:11:58,981 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.2 pTM=0.315 ipTM=0.175 tol=2.46
2024-12-09 03:13:13,995 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.2 pTM=0.314 ipTM=0.172 tol=3.25
2024-12-09 03:14:28,981 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.2 pTM=0.314 ipTM=0.174 tol=3.75
2024-12-09 03:14:28,983 alphafold2_multimer_v3_model_1_seed_000 took 2497.0s (30 recycles)
2024-12-09 03:15:45,302 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.8 pTM=0.311 ipTM=0.173
2024-12-09 03:17:00,189 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.1 pTM=0.318 ipTM=0.183 tol=17.7
2024-12-09 03:18:15,134 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.1 pTM=0.317 ipTM=0.178 tol=10.5
2024-12-09 03:19:30,096 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.1 pTM=0.316 ipTM=0.177 tol=9.41
2024-12-09 03:20:45,067 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44 pTM=0.314 ipTM=0.175 tol=7.17
2024-12-09 03:22:00,029 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=44.2 pTM=0.315 ipTM=0.174 tol=7.75
2024-12-09 03:23:14,973 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.4 pTM=0.315 ipTM=0.176 tol=5.07
2024-12-09 03:24:29,936 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.3 pTM=0.315 ipTM=0.174 tol=5.35
2024-12-09 03:25:44,898 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.3 pTM=0.315 ipTM=0.176 tol=8.23
2024-12-09 03:26:59,843 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.2 pTM=0.316 ipTM=0.175 tol=7.45
2024-12-09 03:28:14,824 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.2 pTM=0.313 ipTM=0.173 tol=8.87
2024-12-09 03:29:29,815 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.3 pTM=0.312 ipTM=0.176 tol=4.81
2024-12-09 03:30:44,786 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.3 pTM=0.314 ipTM=0.175 tol=5.67
2024-12-09 03:31:59,780 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.2 pTM=0.314 ipTM=0.174 tol=7.53
2024-12-09 03:33:14,782 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.2 pTM=0.313 ipTM=0.173 tol=7.5
2024-12-09 03:34:29,739 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.2 pTM=0.315 ipTM=0.173 tol=10.9
2024-12-09 03:35:44,722 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=44.3 pTM=0.314 ipTM=0.173 tol=5.79
2024-12-09 03:36:59,677 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.5 pTM=0.313 ipTM=0.174 tol=4.54
2024-12-09 03:38:14,663 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=44.5 pTM=0.314 ipTM=0.173 tol=3.71
2024-12-09 03:39:29,679 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.6 pTM=0.314 ipTM=0.172 tol=5.18
2024-12-09 03:40:44,671 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=44.4 pTM=0.313 ipTM=0.171 tol=6.03
2024-12-09 03:41:59,696 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.4 pTM=0.315 ipTM=0.173 tol=9.97
2024-12-09 03:43:14,729 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.4 pTM=0.313 ipTM=0.172 tol=5.5
2024-12-09 03:44:29,692 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=44.4 pTM=0.315 ipTM=0.174 tol=5.41
2024-12-09 03:45:44,612 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.1 pTM=0.315 ipTM=0.173 tol=5.74
2024-12-09 03:46:59,506 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.2 pTM=0.317 ipTM=0.175 tol=6.07
2024-12-09 03:48:14,453 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.2 pTM=0.314 ipTM=0.174 tol=6.79
2024-12-09 03:49:29,451 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.1 pTM=0.315 ipTM=0.173 tol=5.26
2024-12-09 03:50:44,417 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44 pTM=0.315 ipTM=0.175 tol=5.41
2024-12-09 03:51:59,399 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.1 pTM=0.315 ipTM=0.174 tol=7.77
2024-12-09 03:53:14,317 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.6 pTM=0.314 ipTM=0.173 tol=31.4
2024-12-09 03:53:14,319 alphafold2_multimer_v3_model_2_seed_000 took 2323.9s (30 recycles)
2024-12-09 03:54:31,084 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.4 pTM=0.297 ipTM=0.157
2024-12-09 03:55:46,369 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=43 pTM=0.316 ipTM=0.166 tol=18.4
2024-12-09 03:57:01,704 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=43.2 pTM=0.318 ipTM=0.163 tol=13.2
2024-12-09 03:58:16,973 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=43.6 pTM=0.326 ipTM=0.18 tol=11.9
2024-12-09 03:59:32,216 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.7 pTM=0.325 ipTM=0.194 tol=8.2
2024-12-09 04:00:47,447 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.8 pTM=0.325 ipTM=0.177 tol=8.87
2024-12-09 04:02:02,659 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.8 pTM=0.326 ipTM=0.196 tol=9.65
2024-12-09 04:03:17,883 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=43.7 pTM=0.328 ipTM=0.194 tol=5.85
2024-12-09 04:04:33,124 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=43.8 pTM=0.329 ipTM=0.211 tol=5.36
2024-12-09 04:05:48,355 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=43.8 pTM=0.329 ipTM=0.202 tol=9.46
2024-12-09 04:07:03,516 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=43.9 pTM=0.329 ipTM=0.216 tol=5.85
2024-12-09 04:08:18,645 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=43.9 pTM=0.332 ipTM=0.227 tol=4.09
2024-12-09 04:09:33,767 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=43.9 pTM=0.332 ipTM=0.23 tol=4
2024-12-09 04:10:48,896 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.2 pTM=0.335 ipTM=0.24 tol=4.52
2024-12-09 04:12:04,056 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44 pTM=0.334 ipTM=0.232 tol=5.21
2024-12-09 04:13:19,259 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=43.9 pTM=0.334 ipTM=0.235 tol=6.54
2024-12-09 04:14:34,421 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=43.9 pTM=0.334 ipTM=0.232 tol=4.75
2024-12-09 04:15:49,576 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=43.9 pTM=0.336 ipTM=0.241 tol=4.23
2024-12-09 04:17:04,710 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=43.8 pTM=0.332 ipTM=0.237 tol=5.45
2024-12-09 04:18:19,866 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44 pTM=0.334 ipTM=0.237 tol=3.44
2024-12-09 04:19:35,007 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.9 pTM=0.335 ipTM=0.245 tol=4.31
2024-12-09 04:20:50,139 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=43.9 pTM=0.335 ipTM=0.242 tol=9.97
2024-12-09 04:22:05,325 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=43.7 pTM=0.33 ipTM=0.221 tol=10.9
2024-12-09 04:23:20,477 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.2 pTM=0.333 ipTM=0.236 tol=6.1
2024-12-09 04:24:35,596 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44 pTM=0.335 ipTM=0.239 tol=6.43
2024-12-09 04:25:50,740 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.1 pTM=0.336 ipTM=0.244 tol=5.12
2024-12-09 04:27:05,881 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.2 pTM=0.336 ipTM=0.257 tol=5.09
2024-12-09 04:28:20,984 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.3 pTM=0.338 ipTM=0.253 tol=4.53
2024-12-09 04:29:36,145 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.2 pTM=0.336 ipTM=0.25 tol=4.25
2024-12-09 04:30:51,290 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44 pTM=0.336 ipTM=0.245 tol=5.37
2024-12-09 04:32:06,472 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.3 pTM=0.334 ipTM=0.246 tol=8.14
2024-12-09 04:32:06,474 alphafold2_multimer_v3_model_3_seed_000 took 2330.7s (30 recycles)
2024-12-09 04:33:23,436 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.5 pTM=0.283 ipTM=0.175
2024-12-09 04:34:38,845 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=42.7 pTM=0.305 ipTM=0.155 tol=15.8
2024-12-09 04:35:54,173 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=42.8 pTM=0.311 ipTM=0.159 tol=11.8
2024-12-09 04:37:09,519 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.9 pTM=0.313 ipTM=0.181 tol=7.32
2024-12-09 04:38:24,864 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.2 pTM=0.314 ipTM=0.202 tol=6.08
2024-12-09 04:39:40,195 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=43.2 pTM=0.313 ipTM=0.169 tol=5.62
2024-12-09 04:40:55,538 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.2 pTM=0.314 ipTM=0.192 tol=8.02
2024-12-09 04:42:10,874 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42.5 pTM=0.311 ipTM=0.16 tol=6.78
2024-12-09 04:43:26,252 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42.8 pTM=0.311 ipTM=0.158 tol=6.16
2024-12-09 04:44:41,584 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=42.4 pTM=0.311 ipTM=0.158 tol=7.47
2024-12-09 04:45:56,998 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.6 pTM=0.31 ipTM=0.157 tol=7.2
2024-12-09 04:47:12,382 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.7 pTM=0.309 ipTM=0.158 tol=6.74
2024-12-09 04:48:27,787 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=42.7 pTM=0.309 ipTM=0.157 tol=5.21
2024-12-09 04:49:43,190 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43 pTM=0.312 ipTM=0.156 tol=11.9
2024-12-09 04:50:58,603 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.9 pTM=0.311 ipTM=0.157 tol=10.2
2024-12-09 04:52:14,013 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43 pTM=0.311 ipTM=0.157 tol=5.44
2024-12-09 04:53:29,417 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.1 pTM=0.311 ipTM=0.159 tol=4.37
2024-12-09 04:54:44,813 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.2 pTM=0.31 ipTM=0.157 tol=5.02
2024-12-09 04:56:00,161 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43 pTM=0.311 ipTM=0.157 tol=3.09
2024-12-09 04:57:15,534 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.4 pTM=0.311 ipTM=0.157 tol=4.66
2024-12-09 04:58:30,904 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.1 pTM=0.311 ipTM=0.158 tol=3.43
2024-12-09 04:59:46,272 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43 pTM=0.31 ipTM=0.158 tol=3.87
2024-12-09 05:01:01,592 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.8 pTM=0.311 ipTM=0.16 tol=11.9
2024-12-09 05:02:16,950 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42.8 pTM=0.311 ipTM=0.157 tol=11.6
2024-12-09 05:03:32,305 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=42.9 pTM=0.312 ipTM=0.158 tol=4.91
2024-12-09 05:04:47,694 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.2 pTM=0.313 ipTM=0.157 tol=4.22
2024-12-09 05:06:03,059 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.1 pTM=0.311 ipTM=0.157 tol=7.34
2024-12-09 05:07:18,469 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.5 pTM=0.312 ipTM=0.156 tol=4.89
2024-12-09 05:08:33,837 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.4 pTM=0.311 ipTM=0.156 tol=4.22
2024-12-09 05:09:49,181 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.3 pTM=0.311 ipTM=0.156 tol=4.31
2024-12-09 05:11:04,490 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.6 pTM=0.311 ipTM=0.156 tol=3.46
2024-12-09 05:11:04,492 alphafold2_multimer_v3_model_4_seed_000 took 2336.6s (30 recycles)
2024-12-09 05:12:21,229 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41.5 pTM=0.3 ipTM=0.171
2024-12-09 05:13:36,504 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=42.8 pTM=0.32 ipTM=0.171 tol=17.4
2024-12-09 05:14:51,727 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.4 pTM=0.326 ipTM=0.172 tol=13.9
2024-12-09 05:16:06,902 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=43.8 pTM=0.325 ipTM=0.172 tol=11.7
2024-12-09 05:17:22,101 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=44.1 pTM=0.326 ipTM=0.171 tol=7.87
2024-12-09 05:18:37,385 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.2 pTM=0.323 ipTM=0.17 tol=10.5
2024-12-09 05:19:52,642 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44.4 pTM=0.323 ipTM=0.17 tol=11
2024-12-09 05:21:07,890 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.3 pTM=0.323 ipTM=0.169 tol=8.62
2024-12-09 05:22:23,040 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.6 pTM=0.326 ipTM=0.171 tol=12
2024-12-09 05:23:38,211 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.3 pTM=0.325 ipTM=0.169 tol=11.7
2024-12-09 05:24:53,352 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=44.4 pTM=0.325 ipTM=0.17 tol=11.1
2024-12-09 05:26:08,552 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.4 pTM=0.325 ipTM=0.172 tol=10.4
2024-12-09 05:27:23,768 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=44.5 pTM=0.326 ipTM=0.17 tol=10.7
2024-12-09 05:28:39,003 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=44.3 pTM=0.325 ipTM=0.169 tol=6.21
2024-12-09 05:29:54,255 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=44.6 pTM=0.324 ipTM=0.17 tol=9.08
2024-12-09 05:31:09,539 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.4 pTM=0.324 ipTM=0.176 tol=6.18
2024-12-09 05:32:24,831 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44.3 pTM=0.324 ipTM=0.171 tol=4.93
2024-12-09 05:33:40,086 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=44.4 pTM=0.326 ipTM=0.172 tol=4.44
2024-12-09 05:34:55,322 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.4 pTM=0.326 ipTM=0.172 tol=9.51
2024-12-09 05:36:10,586 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=44.4 pTM=0.326 ipTM=0.172 tol=10.8
2024-12-09 05:37:25,819 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=44.5 pTM=0.325 ipTM=0.169 tol=6.81
2024-12-09 05:38:41,049 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=44.6 pTM=0.326 ipTM=0.17 tol=9.58
2024-12-09 05:39:56,286 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=44.5 pTM=0.324 ipTM=0.17 tol=6.58
2024-12-09 05:41:11,524 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=44.7 pTM=0.326 ipTM=0.17 tol=5.01
2024-12-09 05:42:26,796 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=44.7 pTM=0.327 ipTM=0.172 tol=8.17
2024-12-09 05:43:42,046 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.5 pTM=0.326 ipTM=0.17 tol=4.02
2024-12-09 05:44:57,299 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.7 pTM=0.326 ipTM=0.171 tol=8.09
2024-12-09 05:46:12,549 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44.7 pTM=0.326 ipTM=0.169 tol=11.3
2024-12-09 05:47:27,795 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.5 pTM=0.325 ipTM=0.171 tol=7.91
2024-12-09 05:48:43,040 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.5 pTM=0.325 ipTM=0.17 tol=9.46
2024-12-09 05:49:58,250 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.6 pTM=0.325 ipTM=0.17 tol=8.59
2024-12-09 05:49:58,252 alphafold2_multimer_v3_model_5_seed_000 took 2332.3s (30 recycles)
2024-12-09 05:49:59,699 reranking models by 'multimer' metric
2024-12-09 05:50:02,840 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 05:53:07,900 Relaxation took 188.2s
2024-12-09 05:53:07,900 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.3 pTM=0.334 ipTM=0.246
2024-12-09 05:55:40,651 Relaxation took 152.7s
2024-12-09 05:55:40,651 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.2 pTM=0.314 ipTM=0.174
2024-12-09 05:59:45,315 Relaxation took 244.7s
2024-12-09 05:59:45,316 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.6 pTM=0.314 ipTM=0.173
2024-12-09 06:02:11,185 Relaxation took 145.9s
2024-12-09 06:02:11,185 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.6 pTM=0.325 ipTM=0.17
2024-12-09 06:04:26,622 Relaxation took 135.4s
2024-12-09 06:04:26,623 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.6 pTM=0.311 ipTM=0.156
2024-12-09 06:04:30,092 Done