2024-12-09 02:34:55,774 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 02:34:56,095 Running on GPU
2024-12-09 02:34:59,724 Found 6 citations for tools or databases
2024-12-09 02:34:59,725 Query 1/1: TRIM39_ZNF331 (length 981)
2024-12-09 02:35:00,023 Sleeping for 7s. Reason: PENDING
2024-12-09 02:35:07,283 Sleeping for 8s. Reason: RUNNING
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2024-12-09 02:36:02,096 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:36:08,351 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:36:14,606 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:36:21,862 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:36:31,128 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:36:39,382 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:36:44,634 Sleeping for 10s. Reason: RUNNING
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2024-12-09 02:37:00,154 Sleeping for 10s. Reason: RUNNING
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2024-12-09 02:37:58,950 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:38:05,202 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:38:11,457 Sleeping for 6s. Reason: RUNNING
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2024-12-09 02:38:26,981 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:38:32,236 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:38:38,487 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:38:44,748 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:38:52,007 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:39:02,261 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:39:12,523 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:39:18,784 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:39:25,042 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:39:35,307 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:39:59,098 Sleeping for 7s. Reason: PENDING
2024-12-09 02:40:06,357 Sleeping for 7s. Reason: PENDING
2024-12-09 02:40:13,614 Sleeping for 9s. Reason: PENDING
2024-12-09 02:40:22,871 Sleeping for 6s. Reason: PENDING
2024-12-09 02:40:29,123 Sleeping for 9s. Reason: PENDING
2024-12-09 02:40:38,379 Sleeping for 6s. Reason: PENDING
2024-12-09 02:40:44,635 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:40:49,889 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:40:56,141 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:41:01,401 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:41:07,659 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:41:13,916 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:41:21,178 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:41:26,439 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:41:31,692 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:41:38,946 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:41:48,205 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:41:56,462 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:42:03,723 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:42:12,984 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:42:20,245 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:42:25,501 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:42:31,751 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:42:41,011 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:42:50,274 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:43:04,427 Setting max_seq=508, max_extra_seq=2048
2024-12-09 02:46:11,030 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.6 pTM=0.307 ipTM=0.196
2024-12-09 02:46:32,646 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.2 pTM=0.321 ipTM=0.175 tol=8.71
2024-12-09 02:46:54,344 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.4 pTM=0.347 ipTM=0.265 tol=5.4
2024-12-09 02:47:16,096 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61 pTM=0.341 ipTM=0.231 tol=3.88
2024-12-09 02:47:37,903 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.3 pTM=0.339 ipTM=0.235 tol=2.22
2024-12-09 02:47:59,748 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.9 pTM=0.339 ipTM=0.218 tol=2.85
2024-12-09 02:48:21,619 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.8 pTM=0.342 ipTM=0.225 tol=1.86
2024-12-09 02:48:43,504 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.6 pTM=0.333 ipTM=0.193 tol=2.52
2024-12-09 02:49:05,408 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.6 pTM=0.334 ipTM=0.188 tol=3.42
2024-12-09 02:49:27,326 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.5 pTM=0.338 ipTM=0.184 tol=1.41
2024-12-09 02:49:49,259 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.5 pTM=0.332 ipTM=0.173 tol=1.66
2024-12-09 02:50:11,214 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.7 pTM=0.334 ipTM=0.18 tol=1.48
2024-12-09 02:50:33,167 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.6 pTM=0.334 ipTM=0.183 tol=1.74
2024-12-09 02:50:55,115 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.5 pTM=0.339 ipTM=0.175 tol=1.42
2024-12-09 02:51:17,060 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.8 pTM=0.339 ipTM=0.159 tol=3.46
2024-12-09 02:51:39,012 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.7 pTM=0.342 ipTM=0.152 tol=1.45
2024-12-09 02:52:00,961 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.5 pTM=0.339 ipTM=0.154 tol=1.9
2024-12-09 02:52:22,897 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.6 pTM=0.344 ipTM=0.164 tol=1.53
2024-12-09 02:52:44,844 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.5 pTM=0.344 ipTM=0.181 tol=1.16
2024-12-09 02:53:06,807 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61 pTM=0.346 ipTM=0.174 tol=1.69
2024-12-09 02:53:28,766 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.7 pTM=0.341 ipTM=0.163 tol=1.8
2024-12-09 02:53:50,722 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.5 pTM=0.341 ipTM=0.161 tol=1.45
2024-12-09 02:54:12,669 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.9 pTM=0.343 ipTM=0.161 tol=1.56
2024-12-09 02:54:34,616 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.3 pTM=0.344 ipTM=0.161 tol=1.19
2024-12-09 02:54:56,555 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.5 pTM=0.342 ipTM=0.156 tol=0.964
2024-12-09 02:55:18,496 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.5 pTM=0.339 ipTM=0.164 tol=1.81
2024-12-09 02:55:40,434 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.341 ipTM=0.159 tol=1.18
2024-12-09 02:56:02,384 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.2 pTM=0.342 ipTM=0.171 tol=1.08
2024-12-09 02:56:24,312 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.4 pTM=0.342 ipTM=0.165 tol=1.25
2024-12-09 02:56:46,258 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.6 pTM=0.346 ipTM=0.167 tol=0.871
2024-12-09 02:57:08,198 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.7 pTM=0.348 ipTM=0.17 tol=1.07
2024-12-09 02:57:08,199 alphafold2_multimer_v3_model_1_seed_000 took 838.7s (30 recycles)
2024-12-09 02:57:30,782 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.8 pTM=0.319 ipTM=0.274
2024-12-09 02:57:52,771 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.4 pTM=0.314 ipTM=0.228 tol=12.2
2024-12-09 02:58:14,741 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.1 pTM=0.319 ipTM=0.235 tol=17.8
2024-12-09 02:58:36,693 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.9 pTM=0.335 ipTM=0.232 tol=6.79
2024-12-09 02:58:58,695 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.7 pTM=0.351 ipTM=0.261 tol=4.66
2024-12-09 02:59:20,696 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.6 pTM=0.356 ipTM=0.246 tol=2.71
2024-12-09 02:59:42,683 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.5 pTM=0.359 ipTM=0.257 tol=3.58
2024-12-09 03:00:04,680 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.8 pTM=0.352 ipTM=0.242 tol=2.16
2024-12-09 03:00:26,668 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.1 pTM=0.362 ipTM=0.297 tol=5.44
2024-12-09 03:00:48,659 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.2 pTM=0.361 ipTM=0.295 tol=2.68
2024-12-09 03:01:10,650 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.5 pTM=0.349 ipTM=0.201 tol=5.74
2024-12-09 03:01:32,632 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.1 pTM=0.354 ipTM=0.268 tol=2.73
2024-12-09 03:01:54,611 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59 pTM=0.353 ipTM=0.231 tol=3.07
2024-12-09 03:02:16,577 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.3 pTM=0.356 ipTM=0.235 tol=1.58
2024-12-09 03:02:38,538 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.8 pTM=0.357 ipTM=0.234 tol=1.95
2024-12-09 03:03:00,506 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.7 pTM=0.357 ipTM=0.222 tol=3.05
2024-12-09 03:03:22,469 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.6 pTM=0.356 ipTM=0.235 tol=3.5
2024-12-09 03:03:44,422 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.7 pTM=0.358 ipTM=0.234 tol=2.63
2024-12-09 03:04:06,386 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.8 pTM=0.36 ipTM=0.242 tol=2.51
2024-12-09 03:04:28,339 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.6 pTM=0.357 ipTM=0.228 tol=2.52
2024-12-09 03:04:50,286 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.6 pTM=0.356 ipTM=0.235 tol=3.04
2024-12-09 03:05:12,227 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.3 pTM=0.353 ipTM=0.221 tol=3.06
2024-12-09 03:05:34,180 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.7 pTM=0.354 ipTM=0.232 tol=3.84
2024-12-09 03:05:56,139 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.2 pTM=0.351 ipTM=0.232 tol=4.04
2024-12-09 03:06:18,107 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.2 pTM=0.352 ipTM=0.231 tol=2.78
2024-12-09 03:06:40,079 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.5 pTM=0.356 ipTM=0.275 tol=5.07
2024-12-09 03:07:02,045 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.7 pTM=0.359 ipTM=0.267 tol=2.44
2024-12-09 03:07:24,021 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.8 pTM=0.362 ipTM=0.268 tol=5.21
2024-12-09 03:07:45,998 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.7 pTM=0.361 ipTM=0.248 tol=1.33
2024-12-09 03:08:07,975 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.7 pTM=0.372 ipTM=0.313 tol=6.04
2024-12-09 03:08:29,938 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.4 pTM=0.367 ipTM=0.29 tol=2.84
2024-12-09 03:08:29,939 alphafold2_multimer_v3_model_2_seed_000 took 681.1s (30 recycles)
2024-12-09 03:08:52,584 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.5 pTM=0.307 ipTM=0.153
2024-12-09 03:09:14,583 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56 pTM=0.334 ipTM=0.261 tol=11.3
2024-12-09 03:09:36,584 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.7 pTM=0.337 ipTM=0.168 tol=7.51
2024-12-09 03:09:58,578 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.7 pTM=0.341 ipTM=0.16 tol=2.64
2024-12-09 03:10:20,539 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.2 pTM=0.368 ipTM=0.346 tol=3.16
2024-12-09 03:10:42,516 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57 pTM=0.353 ipTM=0.172 tol=3.23
2024-12-09 03:11:04,492 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57 pTM=0.357 ipTM=0.204 tol=1.86
2024-12-09 03:11:26,466 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.2 pTM=0.353 ipTM=0.194 tol=1.14
2024-12-09 03:11:48,448 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.8 pTM=0.355 ipTM=0.182 tol=1.98
2024-12-09 03:12:10,431 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.3 pTM=0.359 ipTM=0.214 tol=1.85
2024-12-09 03:12:32,441 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.3 pTM=0.358 ipTM=0.202 tol=5.84
2024-12-09 03:12:54,429 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.7 pTM=0.364 ipTM=0.255 tol=2.34
2024-12-09 03:13:16,404 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.6 pTM=0.362 ipTM=0.214 tol=1.02
2024-12-09 03:13:38,372 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.7 pTM=0.365 ipTM=0.257 tol=1.47
2024-12-09 03:14:00,332 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.8 pTM=0.378 ipTM=0.321 tol=5.66
2024-12-09 03:14:22,330 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.8 pTM=0.359 ipTM=0.165 tol=2.54
2024-12-09 03:14:44,319 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.6 pTM=0.362 ipTM=0.232 tol=2.91
2024-12-09 03:15:06,331 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.9 pTM=0.364 ipTM=0.197 tol=2.84
2024-12-09 03:15:28,338 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.5 pTM=0.367 ipTM=0.244 tol=6.56
2024-12-09 03:15:50,344 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.6 pTM=0.373 ipTM=0.27 tol=5.94
2024-12-09 03:16:12,350 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.5 pTM=0.365 ipTM=0.231 tol=2.1
2024-12-09 03:16:34,350 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.5 pTM=0.358 ipTM=0.19 tol=1.57
2024-12-09 03:16:56,343 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.8 pTM=0.365 ipTM=0.232 tol=6.28
2024-12-09 03:17:18,330 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.9 pTM=0.364 ipTM=0.24 tol=1.33
2024-12-09 03:17:40,311 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.3 pTM=0.36 ipTM=0.22 tol=1.23
2024-12-09 03:18:02,291 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.6 pTM=0.376 ipTM=0.345 tol=5.73
2024-12-09 03:18:24,279 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.2 pTM=0.358 ipTM=0.167 tol=2.98
2024-12-09 03:18:46,259 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.2 pTM=0.357 ipTM=0.209 tol=2.09
2024-12-09 03:19:08,222 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.7 pTM=0.369 ipTM=0.28 tol=6.07
2024-12-09 03:19:30,194 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.2 pTM=0.366 ipTM=0.239 tol=2.19
2024-12-09 03:19:52,160 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.7 pTM=0.377 ipTM=0.295 tol=6.28
2024-12-09 03:19:52,160 alphafold2_multimer_v3_model_3_seed_000 took 681.6s (30 recycles)
2024-12-09 03:20:14,818 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.7 pTM=0.316 ipTM=0.259
2024-12-09 03:20:36,860 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.2 pTM=0.311 ipTM=0.188 tol=30.5
2024-12-09 03:20:58,870 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60 pTM=0.344 ipTM=0.279 tol=8.85
2024-12-09 03:21:20,879 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.6 pTM=0.331 ipTM=0.226 tol=5.2
2024-12-09 03:21:42,894 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60 pTM=0.33 ipTM=0.208 tol=6.22
2024-12-09 03:22:04,902 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.6 pTM=0.329 ipTM=0.198 tol=4.78
2024-12-09 03:22:26,920 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.9 pTM=0.332 ipTM=0.198 tol=4.25
2024-12-09 03:22:48,937 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.1 pTM=0.331 ipTM=0.206 tol=2.25
2024-12-09 03:23:10,952 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.8 pTM=0.33 ipTM=0.189 tol=2.26
2024-12-09 03:23:32,969 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.1 pTM=0.334 ipTM=0.205 tol=2.39
2024-12-09 03:23:54,987 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.3 pTM=0.332 ipTM=0.195 tol=2.83
2024-12-09 03:24:17,017 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.1 pTM=0.333 ipTM=0.204 tol=2.93
2024-12-09 03:24:39,040 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60 pTM=0.329 ipTM=0.186 tol=2.25
2024-12-09 03:25:01,052 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60 pTM=0.337 ipTM=0.204 tol=3.17
2024-12-09 03:25:23,050 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.9 pTM=0.33 ipTM=0.184 tol=2.19
2024-12-09 03:25:45,057 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.3 pTM=0.336 ipTM=0.197 tol=2.93
2024-12-09 03:26:07,073 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.5 pTM=0.334 ipTM=0.201 tol=3.48
2024-12-09 03:26:29,081 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.3 pTM=0.339 ipTM=0.214 tol=3.38
2024-12-09 03:26:51,094 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.2 pTM=0.334 ipTM=0.215 tol=4.06
2024-12-09 03:27:13,104 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.3 pTM=0.336 ipTM=0.218 tol=3.46
2024-12-09 03:27:35,126 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.4 pTM=0.331 ipTM=0.195 tol=2.39
2024-12-09 03:27:57,152 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.2 pTM=0.333 ipTM=0.214 tol=3.37
2024-12-09 03:28:19,178 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.8 pTM=0.333 ipTM=0.2 tol=5.03
2024-12-09 03:28:41,192 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60 pTM=0.335 ipTM=0.224 tol=4.21
2024-12-09 03:29:03,230 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.7 pTM=0.33 ipTM=0.205 tol=3.36
2024-12-09 03:29:25,257 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60 pTM=0.327 ipTM=0.187 tol=3.37
2024-12-09 03:29:47,273 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.3 pTM=0.33 ipTM=0.204 tol=3.88
2024-12-09 03:30:09,294 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60 pTM=0.329 ipTM=0.199 tol=3.48
2024-12-09 03:30:31,318 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.3 pTM=0.329 ipTM=0.209 tol=2.56
2024-12-09 03:30:53,354 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.1 pTM=0.338 ipTM=0.219 tol=6.88
2024-12-09 03:31:15,369 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.3 pTM=0.344 ipTM=0.301 tol=4.32
2024-12-09 03:31:15,370 alphafold2_multimer_v3_model_4_seed_000 took 682.6s (30 recycles)
2024-12-09 03:31:38,022 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55 pTM=0.302 ipTM=0.186
2024-12-09 03:32:00,067 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.7 pTM=0.309 ipTM=0.176 tol=11.1
2024-12-09 03:32:22,094 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.9 pTM=0.328 ipTM=0.272 tol=6.86
2024-12-09 03:32:44,107 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.1 pTM=0.341 ipTM=0.359 tol=5.5
2024-12-09 03:33:06,117 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.5 pTM=0.337 ipTM=0.322 tol=2.73
2024-12-09 03:33:28,141 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.5 pTM=0.328 ipTM=0.262 tol=2.49
2024-12-09 03:33:50,153 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.7 pTM=0.342 ipTM=0.357 tol=4.66
2024-12-09 03:34:12,179 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.6 pTM=0.321 ipTM=0.175 tol=6.3
2024-12-09 03:34:34,202 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.6 pTM=0.318 ipTM=0.178 tol=6.59
2024-12-09 03:34:56,209 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.1 pTM=0.324 ipTM=0.222 tol=2.96
2024-12-09 03:35:18,217 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.8 pTM=0.343 ipTM=0.367 tol=5.85
2024-12-09 03:35:40,235 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.1 pTM=0.319 ipTM=0.177 tol=6.47
2024-12-09 03:36:02,263 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.1 pTM=0.32 ipTM=0.177 tol=3.51
2024-12-09 03:36:24,283 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.9 pTM=0.319 ipTM=0.184 tol=2.49
2024-12-09 03:36:46,311 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.9 pTM=0.325 ipTM=0.19 tol=4.3
2024-12-09 03:37:08,327 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54 pTM=0.315 ipTM=0.185 tol=4.58
2024-12-09 03:37:30,364 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.7 pTM=0.323 ipTM=0.182 tol=7.21
2024-12-09 03:37:52,384 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.2 pTM=0.337 ipTM=0.325 tol=5.62
2024-12-09 03:38:14,401 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54 pTM=0.331 ipTM=0.267 tol=2.73
2024-12-09 03:38:36,412 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.7 pTM=0.345 ipTM=0.371 tol=5.27
2024-12-09 03:38:58,438 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.2 pTM=0.329 ipTM=0.255 tol=2.37
2024-12-09 03:39:20,466 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.3 pTM=0.331 ipTM=0.248 tol=5.04
2024-12-09 03:39:42,482 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.5 pTM=0.328 ipTM=0.249 tol=2.05
2024-12-09 03:40:04,507 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.7 pTM=0.338 ipTM=0.334 tol=4.27
2024-12-09 03:40:26,545 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.2 pTM=0.323 ipTM=0.21 tol=2.94
2024-12-09 03:40:48,586 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.1 pTM=0.327 ipTM=0.221 tol=5.34
2024-12-09 03:41:10,603 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54 pTM=0.329 ipTM=0.22 tol=3
2024-12-09 03:41:32,608 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.6 pTM=0.345 ipTM=0.368 tol=4.38
2024-12-09 03:41:54,619 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.7 pTM=0.327 ipTM=0.212 tol=3.81
2024-12-09 03:42:16,622 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.1 pTM=0.332 ipTM=0.233 tol=3.86
2024-12-09 03:42:38,642 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.3 pTM=0.33 ipTM=0.223 tol=3.52
2024-12-09 03:42:38,643 alphafold2_multimer_v3_model_5_seed_000 took 682.7s (30 recycles)
2024-12-09 03:42:39,244 reranking models by 'multimer' metric
2024-12-09 03:42:40,259 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 03:44:23,300 Relaxation took 104.1s
2024-12-09 03:44:23,300 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.7 pTM=0.377 ipTM=0.295
2024-12-09 03:46:01,133 Relaxation took 97.8s
2024-12-09 03:46:01,134 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.3 pTM=0.344 ipTM=0.301
2024-12-09 03:47:53,683 Relaxation took 112.5s
2024-12-09 03:47:53,683 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.4 pTM=0.367 ipTM=0.29
2024-12-09 03:49:49,761 Relaxation took 116.1s
2024-12-09 03:49:49,761 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.3 pTM=0.33 ipTM=0.223
2024-12-09 03:52:11,685 Relaxation took 141.9s
2024-12-09 03:52:11,686 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.7 pTM=0.348 ipTM=0.17
2024-12-09 03:52:13,792 Done