2024-12-09 02:36:16,658 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 02:36:16,980 Running on GPU
2024-12-09 02:36:20,473 Found 6 citations for tools or databases
2024-12-09 02:36:20,474 Query 1/1: TRIM39_ZNF621 (length 957)
2024-12-09 02:36:20,746 Sleeping for 7s. Reason: PENDING
2024-12-09 02:36:28,005 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:36:37,263 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:36:46,522 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:36:52,774 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:36:58,174 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:37:06,436 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:37:12,695 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:37:17,958 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:37:23,208 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:37:32,466 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:37:41,720 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:37:50,975 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:37:57,229 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:38:03,483 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:38:11,739 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:38:20,997 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:38:31,255 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:38:38,515 Sleeping for 6s. Reason: RUNNING
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2024-12-09 02:38:53,034 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:39:02,288 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:39:09,548 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:39:17,810 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:39:26,068 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:39:36,331 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:39:41,583 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:39:48,844 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:39:55,098 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:40:04,356 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:40:09,610 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:40:15,866 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:40:26,124 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:40:36,384 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:40:43,635 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:40:53,903 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:41:03,163 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:41:12,426 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:41:18,686 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:41:26,948 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:41:32,349 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:41:43,334 Sleeping for 8s. Reason: PENDING
2024-12-09 02:41:51,589 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:42:01,850 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:42:09,112 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:42:17,370 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:42:24,627 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:42:34,887 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:42:43,141 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:42:50,410 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:42:55,661 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:43:03,919 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:43:13,174 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:43:18,433 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:43:28,699 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:43:37,956 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:43:45,211 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:43:52,468 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:44:04,158 Setting max_seq=508, max_extra_seq=2048
2024-12-09 02:47:08,299 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.7 pTM=0.303 ipTM=0.146
2024-12-09 02:47:28,963 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.1 pTM=0.318 ipTM=0.151 tol=13.3
2024-12-09 02:47:49,672 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.7 pTM=0.344 ipTM=0.181 tol=6.3
2024-12-09 02:48:10,423 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.1 pTM=0.354 ipTM=0.242 tol=4.04
2024-12-09 02:48:31,207 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.9 pTM=0.356 ipTM=0.251 tol=4.27
2024-12-09 02:48:52,013 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.9 pTM=0.356 ipTM=0.203 tol=2.85
2024-12-09 02:49:12,841 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.8 pTM=0.356 ipTM=0.192 tol=3.42
2024-12-09 02:49:33,685 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.6 pTM=0.356 ipTM=0.187 tol=2.64
2024-12-09 02:49:54,551 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.8 pTM=0.352 ipTM=0.162 tol=2.72
2024-12-09 02:50:15,445 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.8 pTM=0.357 ipTM=0.164 tol=3.26
2024-12-09 02:50:36,341 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.8 pTM=0.352 ipTM=0.159 tol=1.38
2024-12-09 02:50:57,238 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.2 pTM=0.353 ipTM=0.154 tol=3.14
2024-12-09 02:51:18,128 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58 pTM=0.351 ipTM=0.149 tol=3.37
2024-12-09 02:51:39,036 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58 pTM=0.35 ipTM=0.145 tol=1.29
2024-12-09 02:51:59,942 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.8 pTM=0.351 ipTM=0.142 tol=4.21
2024-12-09 02:52:20,843 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.4 pTM=0.353 ipTM=0.144 tol=2.02
2024-12-09 02:52:41,745 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.6 pTM=0.353 ipTM=0.144 tol=1.42
2024-12-09 02:53:02,665 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.8 pTM=0.354 ipTM=0.146 tol=3.19
2024-12-09 02:53:23,583 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.4 pTM=0.35 ipTM=0.142 tol=4.07
2024-12-09 02:53:44,503 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.6 pTM=0.352 ipTM=0.145 tol=3.34
2024-12-09 02:54:05,409 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.3 pTM=0.352 ipTM=0.145 tol=2.8
2024-12-09 02:54:26,313 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.3 pTM=0.351 ipTM=0.146 tol=2.49
2024-12-09 02:54:47,213 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.5 pTM=0.35 ipTM=0.142 tol=2.53
2024-12-09 02:55:08,110 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.4 pTM=0.352 ipTM=0.144 tol=3.08
2024-12-09 02:55:29,006 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.4 pTM=0.353 ipTM=0.142 tol=1.53
2024-12-09 02:55:49,912 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.2 pTM=0.349 ipTM=0.143 tol=1.77
2024-12-09 02:56:10,809 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.3 pTM=0.35 ipTM=0.141 tol=2.76
2024-12-09 02:56:31,695 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.9 pTM=0.346 ipTM=0.143 tol=3.11
2024-12-09 02:56:52,592 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.1 pTM=0.351 ipTM=0.144 tol=2.76
2024-12-09 02:57:13,475 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.1 pTM=0.35 ipTM=0.144 tol=2.71
2024-12-09 02:57:34,365 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.9 pTM=0.353 ipTM=0.144 tol=2.4
2024-12-09 02:57:34,366 alphafold2_multimer_v3_model_1_seed_000 took 806.6s (30 recycles)
2024-12-09 02:57:55,863 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.4 pTM=0.326 ipTM=0.214
2024-12-09 02:58:16,812 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.9 pTM=0.31 ipTM=0.199 tol=12.7
2024-12-09 02:58:37,716 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.2 pTM=0.316 ipTM=0.147 tol=13.2
2024-12-09 02:58:58,641 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.4 pTM=0.347 ipTM=0.217 tol=10.5
2024-12-09 02:59:19,576 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.4 pTM=0.363 ipTM=0.211 tol=6.02
2024-12-09 02:59:40,507 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.7 pTM=0.366 ipTM=0.224 tol=5.1
2024-12-09 03:00:01,436 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.8 pTM=0.366 ipTM=0.219 tol=3.33
2024-12-09 03:00:22,374 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.8 pTM=0.369 ipTM=0.234 tol=3.64
2024-12-09 03:00:43,309 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.1 pTM=0.362 ipTM=0.208 tol=2.29
2024-12-09 03:01:04,244 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.9 pTM=0.367 ipTM=0.227 tol=3.93
2024-12-09 03:01:25,171 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56 pTM=0.363 ipTM=0.213 tol=3.81
2024-12-09 03:01:46,107 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.2 pTM=0.371 ipTM=0.236 tol=6.65
2024-12-09 03:02:07,034 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.3 pTM=0.368 ipTM=0.238 tol=4.33
2024-12-09 03:02:27,963 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.2 pTM=0.373 ipTM=0.259 tol=6.01
2024-12-09 03:02:48,898 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.2 pTM=0.371 ipTM=0.222 tol=4.17
2024-12-09 03:03:09,845 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.1 pTM=0.373 ipTM=0.235 tol=5.74
2024-12-09 03:03:30,767 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.2 pTM=0.37 ipTM=0.212 tol=4.38
2024-12-09 03:03:51,694 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.2 pTM=0.374 ipTM=0.234 tol=4.92
2024-12-09 03:04:12,595 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.1 pTM=0.371 ipTM=0.217 tol=7.14
2024-12-09 03:04:33,483 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.8 pTM=0.375 ipTM=0.24 tol=4.4
2024-12-09 03:04:54,362 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.8 pTM=0.372 ipTM=0.238 tol=4.14
2024-12-09 03:05:15,251 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.8 pTM=0.372 ipTM=0.258 tol=3.68
2024-12-09 03:05:36,142 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.7 pTM=0.374 ipTM=0.226 tol=3.45
2024-12-09 03:05:57,041 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56 pTM=0.378 ipTM=0.248 tol=2.98
2024-12-09 03:06:17,956 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.1 pTM=0.376 ipTM=0.231 tol=3.38
2024-12-09 03:06:38,870 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.9 pTM=0.372 ipTM=0.245 tol=3.01
2024-12-09 03:06:59,789 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.2 pTM=0.371 ipTM=0.217 tol=2.93
2024-12-09 03:07:20,709 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.8 pTM=0.368 ipTM=0.226 tol=1.71
2024-12-09 03:07:41,637 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.8 pTM=0.369 ipTM=0.214 tol=3.7
2024-12-09 03:08:02,565 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.9 pTM=0.367 ipTM=0.22 tol=6.43
2024-12-09 03:08:23,491 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.7 pTM=0.372 ipTM=0.229 tol=3.56
2024-12-09 03:08:23,492 alphafold2_multimer_v3_model_2_seed_000 took 648.6s (30 recycles)
2024-12-09 03:08:45,080 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.7 pTM=0.301 ipTM=0.158
2024-12-09 03:09:06,109 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.5 pTM=0.301 ipTM=0.154 tol=18.9
2024-12-09 03:09:27,120 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.3 pTM=0.312 ipTM=0.15 tol=12.8
2024-12-09 03:09:48,119 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.3 pTM=0.344 ipTM=0.136 tol=12.1
2024-12-09 03:10:09,074 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55 pTM=0.387 ipTM=0.393 tol=8.67
2024-12-09 03:10:30,031 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.4 pTM=0.353 ipTM=0.17 tol=8.08
2024-12-09 03:10:50,984 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.8 pTM=0.357 ipTM=0.186 tol=6.83
2024-12-09 03:11:11,923 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.8 pTM=0.359 ipTM=0.193 tol=3.29
2024-12-09 03:11:32,865 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55 pTM=0.357 ipTM=0.186 tol=4.03
2024-12-09 03:11:53,809 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.1 pTM=0.367 ipTM=0.208 tol=3.55
2024-12-09 03:12:14,744 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55.3 pTM=0.367 ipTM=0.221 tol=4.98
2024-12-09 03:12:35,704 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.5 pTM=0.367 ipTM=0.21 tol=2.46
2024-12-09 03:12:56,665 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55 pTM=0.363 ipTM=0.203 tol=2.25
2024-12-09 03:13:17,609 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.8 pTM=0.367 ipTM=0.218 tol=2.27
2024-12-09 03:13:38,556 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.9 pTM=0.36 ipTM=0.198 tol=2.09
2024-12-09 03:13:59,504 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.1 pTM=0.373 ipTM=0.226 tol=2.41
2024-12-09 03:14:20,446 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.9 pTM=0.367 ipTM=0.21 tol=3.16
2024-12-09 03:14:41,398 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.9 pTM=0.376 ipTM=0.221 tol=2.79
2024-12-09 03:15:02,366 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55 pTM=0.368 ipTM=0.201 tol=2.56
2024-12-09 03:15:23,328 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55 pTM=0.381 ipTM=0.251 tol=2.16
2024-12-09 03:15:44,272 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55 pTM=0.376 ipTM=0.238 tol=3.35
2024-12-09 03:16:05,235 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.8 pTM=0.381 ipTM=0.262 tol=2.43
2024-12-09 03:16:26,185 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.2 pTM=0.378 ipTM=0.229 tol=2.69
2024-12-09 03:16:47,134 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.5 pTM=0.389 ipTM=0.255 tol=2.49
2024-12-09 03:17:08,080 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.2 pTM=0.38 ipTM=0.229 tol=4.59
2024-12-09 03:17:29,037 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.4 pTM=0.379 ipTM=0.229 tol=3.54
2024-12-09 03:17:49,992 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.9 pTM=0.379 ipTM=0.23 tol=2.57
2024-12-09 03:18:10,945 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.8 pTM=0.378 ipTM=0.226 tol=3.5
2024-12-09 03:18:31,909 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.9 pTM=0.377 ipTM=0.226 tol=3.56
2024-12-09 03:18:52,864 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.7 pTM=0.38 ipTM=0.23 tol=5.37
2024-12-09 03:19:13,820 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.4 pTM=0.375 ipTM=0.222 tol=4
2024-12-09 03:19:13,821 alphafold2_multimer_v3_model_3_seed_000 took 649.8s (30 recycles)
2024-12-09 03:19:35,371 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.8 pTM=0.329 ipTM=0.284
2024-12-09 03:19:56,355 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.8 pTM=0.327 ipTM=0.245 tol=25.9
2024-12-09 03:20:17,324 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57 pTM=0.352 ipTM=0.224 tol=7.96
2024-12-09 03:20:38,298 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.4 pTM=0.341 ipTM=0.204 tol=9.48
2024-12-09 03:20:59,251 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.2 pTM=0.34 ipTM=0.215 tol=6.2
2024-12-09 03:21:20,208 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.9 pTM=0.34 ipTM=0.229 tol=4.04
2024-12-09 03:21:41,168 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.1 pTM=0.337 ipTM=0.188 tol=3.86
2024-12-09 03:22:02,120 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.2 pTM=0.341 ipTM=0.207 tol=4.08
2024-12-09 03:22:23,078 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56 pTM=0.334 ipTM=0.186 tol=3.29
2024-12-09 03:22:44,042 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.8 pTM=0.343 ipTM=0.214 tol=5.83
2024-12-09 03:23:05,014 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.2 pTM=0.343 ipTM=0.215 tol=7.13
2024-12-09 03:23:25,980 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.2 pTM=0.335 ipTM=0.189 tol=8.05
2024-12-09 03:23:46,950 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.5 pTM=0.344 ipTM=0.203 tol=5.2
2024-12-09 03:24:07,912 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.2 pTM=0.342 ipTM=0.213 tol=5.31
2024-12-09 03:24:28,864 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56 pTM=0.342 ipTM=0.217 tol=6.59
2024-12-09 03:24:49,818 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56 pTM=0.344 ipTM=0.218 tol=4.75
2024-12-09 03:25:10,773 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.1 pTM=0.348 ipTM=0.211 tol=5.89
2024-12-09 03:25:31,713 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.4 pTM=0.354 ipTM=0.267 tol=4.91
2024-12-09 03:25:52,658 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.2 pTM=0.344 ipTM=0.213 tol=4.43
2024-12-09 03:26:13,607 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56 pTM=0.347 ipTM=0.213 tol=4.12
2024-12-09 03:26:34,548 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56 pTM=0.346 ipTM=0.219 tol=2.68
2024-12-09 03:26:55,493 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.5 pTM=0.342 ipTM=0.205 tol=2.88
2024-12-09 03:27:16,440 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.1 pTM=0.347 ipTM=0.232 tol=2.28
2024-12-09 03:27:37,409 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.9 pTM=0.347 ipTM=0.204 tol=2.75
2024-12-09 03:27:58,370 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.3 pTM=0.34 ipTM=0.197 tol=2.94
2024-12-09 03:28:19,339 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55 pTM=0.342 ipTM=0.219 tol=6.87
2024-12-09 03:28:40,289 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.8 pTM=0.346 ipTM=0.215 tol=4.43
2024-12-09 03:29:01,264 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.9 pTM=0.344 ipTM=0.216 tol=6.83
2024-12-09 03:29:22,238 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.8 pTM=0.35 ipTM=0.232 tol=3.6
2024-12-09 03:29:43,197 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56 pTM=0.344 ipTM=0.209 tol=4.8
2024-12-09 03:30:04,151 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.7 pTM=0.345 ipTM=0.204 tol=6.1
2024-12-09 03:30:04,151 alphafold2_multimer_v3_model_4_seed_000 took 649.8s (30 recycles)
2024-12-09 03:30:25,761 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.9 pTM=0.296 ipTM=0.148
2024-12-09 03:30:46,837 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.8 pTM=0.306 ipTM=0.153 tol=12.8
2024-12-09 03:31:07,892 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.1 pTM=0.356 ipTM=0.372 tol=13.2
2024-12-09 03:31:28,907 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.3 pTM=0.354 ipTM=0.323 tol=7.57
2024-12-09 03:31:49,941 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.8 pTM=0.331 ipTM=0.25 tol=4.55
2024-12-09 03:32:10,968 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.1 pTM=0.342 ipTM=0.29 tol=2.9
2024-12-09 03:32:31,995 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.9 pTM=0.339 ipTM=0.249 tol=4.48
2024-12-09 03:32:53,036 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.7 pTM=0.34 ipTM=0.261 tol=3.56
2024-12-09 03:33:14,058 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.4 pTM=0.332 ipTM=0.228 tol=4.36
2024-12-09 03:33:35,091 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.3 pTM=0.341 ipTM=0.271 tol=2.56
2024-12-09 03:33:56,112 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.8 pTM=0.34 ipTM=0.26 tol=3.27
2024-12-09 03:34:17,128 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.1 pTM=0.344 ipTM=0.284 tol=5.23
2024-12-09 03:34:38,133 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.4 pTM=0.343 ipTM=0.271 tol=5.26
2024-12-09 03:34:59,151 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.4 pTM=0.326 ipTM=0.26 tol=12.6
2024-12-09 03:35:20,159 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.3 pTM=0.331 ipTM=0.24 tol=10.4
2024-12-09 03:35:41,174 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.3 pTM=0.333 ipTM=0.209 tol=7.23
2024-12-09 03:36:02,197 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.8 pTM=0.331 ipTM=0.228 tol=4.48
2024-12-09 03:36:23,217 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.1 pTM=0.33 ipTM=0.221 tol=2.48
2024-12-09 03:36:44,236 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.4 pTM=0.331 ipTM=0.219 tol=6.8
2024-12-09 03:37:05,247 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.1 pTM=0.338 ipTM=0.256 tol=6.43
2024-12-09 03:37:26,244 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.2 pTM=0.337 ipTM=0.253 tol=3.55
2024-12-09 03:37:47,251 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.1 pTM=0.342 ipTM=0.287 tol=4.51
2024-12-09 03:38:08,253 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.2 pTM=0.341 ipTM=0.268 tol=3.38
2024-12-09 03:38:29,266 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.3 pTM=0.338 ipTM=0.261 tol=3.95
2024-12-09 03:38:50,303 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.7 pTM=0.332 ipTM=0.232 tol=5.07
2024-12-09 03:39:11,345 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.2 pTM=0.335 ipTM=0.221 tol=8.86
2024-12-09 03:39:32,376 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.5 pTM=0.343 ipTM=0.269 tol=5.52
2024-12-09 03:39:53,398 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51 pTM=0.329 ipTM=0.226 tol=3.67
2024-12-09 03:40:14,418 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51 pTM=0.336 ipTM=0.233 tol=4.6
2024-12-09 03:40:35,451 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.2 pTM=0.328 ipTM=0.212 tol=5.78
2024-12-09 03:40:56,484 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.8 pTM=0.331 ipTM=0.206 tol=4.27
2024-12-09 03:40:56,484 alphafold2_multimer_v3_model_5_seed_000 took 651.8s (30 recycles)
2024-12-09 03:40:57,057 reranking models by 'multimer' metric
2024-12-09 03:40:59,455 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 03:43:00,163 Relaxation took 123.1s
2024-12-09 03:43:00,163 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.7 pTM=0.372 ipTM=0.229
2024-12-09 03:44:44,708 Relaxation took 104.5s
2024-12-09 03:44:44,708 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.4 pTM=0.375 ipTM=0.222
2024-12-09 03:46:30,678 Relaxation took 106.0s
2024-12-09 03:46:30,678 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.7 pTM=0.345 ipTM=0.204
2024-12-09 03:48:05,347 Relaxation took 94.7s
2024-12-09 03:48:05,348 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.8 pTM=0.331 ipTM=0.206
2024-12-09 03:49:22,865 Relaxation took 77.5s
2024-12-09 03:49:22,865 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.9 pTM=0.353 ipTM=0.144
2024-12-09 03:49:24,585 Done