2024-12-09 02:37:36,191 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 02:37:36,521 Running on GPU
2024-12-09 02:37:39,923 Found 6 citations for tools or databases
2024-12-09 02:37:39,924 Query 1/1: TRIM39_ZNF658 (length 1577)
2024-12-09 02:37:40,222 Sleeping for 8s. Reason: PENDING
2024-12-09 02:37:48,471 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:37:58,729 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:38:08,987 Sleeping for 7s. Reason: RUNNING
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2024-12-09 02:38:32,755 Sleeping for 5s. Reason: RUNNING
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2024-12-09 02:39:02,799 Sleeping for 9s. Reason: RUNNING
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2024-12-09 02:39:42,354 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:39:49,611 Sleeping for 8s. Reason: RUNNING
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2024-12-09 02:40:12,382 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:40:20,648 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:40:25,906 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:40:36,164 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:40:45,424 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:40:54,682 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:41:01,936 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:41:11,195 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:41:19,451 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:41:29,715 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:41:37,969 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:41:48,227 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:41:56,485 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:42:04,747 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:42:11,007 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:42:16,263 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:42:21,518 Sleeping for 8s. Reason: RUNNING
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2024-12-09 02:42:44,287 Sleeping for 10s. Reason: RUNNING
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2024-12-09 02:43:10,431 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:43:25,367 Sleeping for 9s. Reason: PENDING
2024-12-09 02:43:34,637 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:43:39,897 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:43:46,154 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:43:52,413 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:44:02,674 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:44:09,929 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:44:17,185 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:44:23,436 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:44:31,056 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:44:38,323 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:44:44,579 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:44:49,830 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:44:56,083 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:45:01,344 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:45:09,600 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:45:19,858 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:45:29,119 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:45:35,371 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:45:41,626 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:45:50,884 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:45:56,140 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:46:02,393 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:46:10,660 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:46:15,929 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:46:22,182 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:46:30,446 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:46:35,702 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:46:40,958 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:46:47,221 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:46:55,484 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:47:10,354 Setting max_seq=508, max_extra_seq=2048
2024-12-09 02:51:21,048 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.2 pTM=0.26 ipTM=0.189
2024-12-09 02:52:36,861 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.6 pTM=0.289 ipTM=0.421 tol=22.2
2024-12-09 02:53:52,687 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.7 pTM=0.273 ipTM=0.216 tol=8.67
2024-12-09 02:55:08,570 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.5 pTM=0.277 ipTM=0.224 tol=6.32
2024-12-09 02:56:24,496 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.3 pTM=0.297 ipTM=0.407 tol=5.6
2024-12-09 02:57:40,506 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.6 pTM=0.279 ipTM=0.205 tol=5.82
2024-12-09 02:58:56,474 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.3 pTM=0.276 ipTM=0.202 tol=4.62
2024-12-09 03:00:12,425 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.6 pTM=0.277 ipTM=0.2 tol=4.08
2024-12-09 03:01:28,401 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.8 pTM=0.277 ipTM=0.196 tol=4.67
2024-12-09 03:02:44,414 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.8 pTM=0.278 ipTM=0.194 tol=5.47
2024-12-09 03:04:00,386 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.6 pTM=0.276 ipTM=0.19 tol=4.11
2024-12-09 03:05:16,294 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.9 pTM=0.277 ipTM=0.19 tol=2.91
2024-12-09 03:06:32,342 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.5 pTM=0.279 ipTM=0.21 tol=11.2
2024-12-09 03:07:48,409 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.8 pTM=0.281 ipTM=0.188 tol=7.26
2024-12-09 03:09:04,443 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.7 pTM=0.281 ipTM=0.184 tol=3.84
2024-12-09 03:10:20,413 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.8 pTM=0.282 ipTM=0.181 tol=3.62
2024-12-09 03:11:36,343 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.2 pTM=0.282 ipTM=0.181 tol=3.78
2024-12-09 03:12:52,272 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.7 pTM=0.283 ipTM=0.179 tol=3.37
2024-12-09 03:14:08,240 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.7 pTM=0.282 ipTM=0.179 tol=2.34
2024-12-09 03:15:24,240 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.5 pTM=0.281 ipTM=0.179 tol=4.27
2024-12-09 03:16:40,253 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.5 pTM=0.28 ipTM=0.18 tol=5.19
2024-12-09 03:17:56,268 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.6 pTM=0.281 ipTM=0.178 tol=4.43
2024-12-09 03:19:12,222 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.5 pTM=0.282 ipTM=0.194 tol=10
2024-12-09 03:20:28,172 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.2 pTM=0.283 ipTM=0.198 tol=6.72
2024-12-09 03:21:44,112 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.3 pTM=0.284 ipTM=0.202 tol=6.84
2024-12-09 03:23:00,123 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.4 pTM=0.283 ipTM=0.203 tol=6.4
2024-12-09 03:24:16,188 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=49.4 pTM=0.284 ipTM=0.198 tol=3
2024-12-09 03:25:32,257 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.2 pTM=0.283 ipTM=0.2 tol=3.44
2024-12-09 03:26:48,259 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.2 pTM=0.287 ipTM=0.212 tol=6.71
2024-12-09 03:28:04,243 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.2 pTM=0.285 ipTM=0.206 tol=6.93
2024-12-09 03:29:20,219 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.8 pTM=0.287 ipTM=0.208 tol=4.56
2024-12-09 03:29:20,221 alphafold2_multimer_v3_model_1_seed_000 took 2525.0s (30 recycles)
2024-12-09 03:30:37,770 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.6 pTM=0.273 ipTM=0.215
2024-12-09 03:31:53,823 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.6 pTM=0.296 ipTM=0.448 tol=16.3
2024-12-09 03:33:09,848 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45 pTM=0.269 ipTM=0.231 tol=11.6
2024-12-09 03:34:25,882 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.9 pTM=0.271 ipTM=0.244 tol=7.05
2024-12-09 03:35:41,981 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.3 pTM=0.269 ipTM=0.244 tol=9.39
2024-12-09 03:36:58,107 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.4 pTM=0.273 ipTM=0.243 tol=10.1
2024-12-09 03:38:14,185 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.9 pTM=0.271 ipTM=0.22 tol=6.83
2024-12-09 03:39:30,248 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.4 pTM=0.271 ipTM=0.213 tol=6.82
2024-12-09 03:40:46,290 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.8 pTM=0.273 ipTM=0.198 tol=6.51
2024-12-09 03:42:02,387 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.8 pTM=0.271 ipTM=0.186 tol=7.01
2024-12-09 03:43:18,510 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.9 pTM=0.271 ipTM=0.177 tol=7.2
2024-12-09 03:44:34,639 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.7 pTM=0.275 ipTM=0.17 tol=8.02
2024-12-09 03:45:50,740 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.6 pTM=0.279 ipTM=0.167 tol=5.81
2024-12-09 03:47:06,843 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.7 pTM=0.281 ipTM=0.167 tol=4.87
2024-12-09 03:48:22,968 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.8 pTM=0.284 ipTM=0.167 tol=5.41
2024-12-09 03:49:39,060 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.8 pTM=0.285 ipTM=0.166 tol=7.42
2024-12-09 03:50:55,180 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.7 pTM=0.285 ipTM=0.167 tol=5.12
2024-12-09 03:52:11,275 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.8 pTM=0.283 ipTM=0.165 tol=5.31
2024-12-09 03:53:27,354 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.8 pTM=0.284 ipTM=0.166 tol=4.6
2024-12-09 03:54:43,439 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.8 pTM=0.284 ipTM=0.166 tol=4.85
2024-12-09 03:55:59,504 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.5 pTM=0.283 ipTM=0.167 tol=6.53
2024-12-09 03:57:15,573 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.2 pTM=0.286 ipTM=0.166 tol=4.93
2024-12-09 03:58:31,749 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.9 pTM=0.283 ipTM=0.168 tol=3.83
2024-12-09 03:59:47,930 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.9 pTM=0.282 ipTM=0.167 tol=5.51
2024-12-09 04:01:04,106 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.7 pTM=0.285 ipTM=0.167 tol=7.06
2024-12-09 04:02:20,193 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.2 pTM=0.282 ipTM=0.166 tol=4.59
2024-12-09 04:03:36,250 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.285 ipTM=0.165 tol=5.5
2024-12-09 04:04:52,234 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.8 pTM=0.285 ipTM=0.168 tol=4.12
2024-12-09 04:06:08,261 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47.8 pTM=0.287 ipTM=0.17 tol=3.71
2024-12-09 04:07:24,303 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48 pTM=0.287 ipTM=0.171 tol=4.43
2024-12-09 04:08:40,369 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=47.5 pTM=0.287 ipTM=0.168 tol=4.01
2024-12-09 04:08:40,370 alphafold2_multimer_v3_model_2_seed_000 took 2358.7s (30 recycles)
2024-12-09 04:09:58,372 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.6 pTM=0.285 ipTM=0.269
2024-12-09 04:11:14,867 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.4 pTM=0.275 ipTM=0.182 tol=28.9
2024-12-09 04:12:31,139 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.1 pTM=0.297 ipTM=0.264 tol=17
2024-12-09 04:13:47,449 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.4 pTM=0.317 ipTM=0.396 tol=18.3
2024-12-09 04:15:03,777 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47 pTM=0.302 ipTM=0.225 tol=5.68
2024-12-09 04:16:20,001 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.6 pTM=0.304 ipTM=0.231 tol=4.66
2024-12-09 04:17:36,223 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48 pTM=0.328 ipTM=0.486 tol=4.8
2024-12-09 04:18:52,523 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47 pTM=0.302 ipTM=0.239 tol=6.22
2024-12-09 04:20:08,764 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.2 pTM=0.3 ipTM=0.221 tol=4.25
2024-12-09 04:21:24,938 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.2 pTM=0.324 ipTM=0.478 tol=4.06
2024-12-09 04:22:41,250 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.1 pTM=0.301 ipTM=0.213 tol=4.59
2024-12-09 04:23:57,501 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.3 pTM=0.295 ipTM=0.226 tol=13.2
2024-12-09 04:25:13,754 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.5 pTM=0.323 ipTM=0.46 tol=16.6
2024-12-09 04:26:30,055 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.1 pTM=0.3 ipTM=0.214 tol=7.36
2024-12-09 04:27:46,295 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.2 pTM=0.299 ipTM=0.261 tol=13.4
2024-12-09 04:29:02,572 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.5 pTM=0.322 ipTM=0.442 tol=13.9
2024-12-09 04:30:18,927 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.9 pTM=0.3 ipTM=0.198 tol=6.74
2024-12-09 04:31:35,202 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.1 pTM=0.302 ipTM=0.204 tol=6.08
2024-12-09 04:32:51,413 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.8 pTM=0.329 ipTM=0.484 tol=6.91
2024-12-09 04:34:07,728 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.8 pTM=0.302 ipTM=0.217 tol=6.22
2024-12-09 04:35:23,995 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47 pTM=0.301 ipTM=0.218 tol=7.36
2024-12-09 04:36:40,239 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.3 pTM=0.328 ipTM=0.475 tol=4.42
2024-12-09 04:37:56,599 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.1 pTM=0.301 ipTM=0.21 tol=5.42
2024-12-09 04:39:12,977 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.1 pTM=0.3 ipTM=0.211 tol=4.75
2024-12-09 04:40:29,305 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.5 pTM=0.322 ipTM=0.459 tol=8.42
2024-12-09 04:41:45,621 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.9 pTM=0.299 ipTM=0.202 tol=7.09
2024-12-09 04:43:01,951 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=47.3 pTM=0.292 ipTM=0.182 tol=8.03
2024-12-09 04:44:18,221 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.9 pTM=0.322 ipTM=0.47 tol=6.64
2024-12-09 04:45:34,510 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.7 pTM=0.3 ipTM=0.206 tol=7.77
2024-12-09 04:46:50,791 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.6 pTM=0.298 ipTM=0.208 tol=4.72
2024-12-09 04:48:07,050 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.1 pTM=0.325 ipTM=0.469 tol=3.74
2024-12-09 04:48:07,052 alphafold2_multimer_v3_model_3_seed_000 took 2365.2s (30 recycles)
2024-12-09 04:49:25,080 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45 pTM=0.288 ipTM=0.423
2024-12-09 04:50:41,717 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.4 pTM=0.264 ipTM=0.204 tol=31.1
2024-12-09 04:51:58,183 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.7 pTM=0.266 ipTM=0.226 tol=12.6
2024-12-09 04:53:14,641 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.7 pTM=0.264 ipTM=0.184 tol=11.8
2024-12-09 04:54:31,080 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.3 pTM=0.293 ipTM=0.409 tol=19.2
2024-12-09 04:55:47,579 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.2 pTM=0.273 ipTM=0.227 tol=11.3
2024-12-09 04:57:04,089 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.3 pTM=0.265 ipTM=0.187 tol=8.99
2024-12-09 04:58:20,611 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.2 pTM=0.26 ipTM=0.181 tol=7.61
2024-12-09 04:59:37,088 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.3 pTM=0.286 ipTM=0.395 tol=11.4
2024-12-09 05:00:53,594 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.1 pTM=0.264 ipTM=0.198 tol=8.89
2024-12-09 05:02:10,131 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46 pTM=0.261 ipTM=0.18 tol=7.27
2024-12-09 05:03:26,580 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.8 pTM=0.271 ipTM=0.239 tol=6.87
2024-12-09 05:04:42,967 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.6 pTM=0.271 ipTM=0.23 tol=6.09
2024-12-09 05:05:59,289 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.1 pTM=0.277 ipTM=0.299 tol=7.47
2024-12-09 05:07:15,730 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.2 pTM=0.263 ipTM=0.193 tol=6.04
2024-12-09 05:08:32,226 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.6 pTM=0.263 ipTM=0.188 tol=4.73
2024-12-09 05:09:48,702 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.8 pTM=0.289 ipTM=0.396 tol=7.89
2024-12-09 05:11:05,204 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.8 pTM=0.267 ipTM=0.2 tol=6.57
2024-12-09 05:12:21,714 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.6 pTM=0.265 ipTM=0.196 tol=5.72
2024-12-09 05:13:38,158 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47 pTM=0.264 ipTM=0.188 tol=3.66
2024-12-09 05:14:54,555 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.2 pTM=0.277 ipTM=0.289 tol=5.88
2024-12-09 05:16:10,981 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.1 pTM=0.272 ipTM=0.239 tol=5.79
2024-12-09 05:17:27,387 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.8 pTM=0.292 ipTM=0.421 tol=10.1
2024-12-09 05:18:43,820 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46 pTM=0.269 ipTM=0.219 tol=5.38
2024-12-09 05:20:00,215 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46 pTM=0.268 ipTM=0.214 tol=3.69
2024-12-09 05:21:16,600 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.1 pTM=0.269 ipTM=0.217 tol=5.09
2024-12-09 05:22:32,923 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.9 pTM=0.295 ipTM=0.453 tol=9.37
2024-12-09 05:23:49,315 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.9 pTM=0.271 ipTM=0.233 tol=8.59
2024-12-09 05:25:05,702 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46 pTM=0.269 ipTM=0.21 tol=7.66
2024-12-09 05:26:22,085 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.8 pTM=0.284 ipTM=0.37 tol=8.63
2024-12-09 05:27:38,464 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.8 pTM=0.268 ipTM=0.205 tol=7.55
2024-12-09 05:27:38,465 alphafold2_multimer_v3_model_4_seed_000 took 2369.9s (30 recycles)
2024-12-09 05:28:56,352 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.4 pTM=0.297 ipTM=0.455
2024-12-09 05:30:12,976 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43.4 pTM=0.267 ipTM=0.213 tol=27.3
2024-12-09 05:31:29,460 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.8 pTM=0.272 ipTM=0.217 tol=10.8
2024-12-09 05:32:45,895 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=44.6 pTM=0.299 ipTM=0.46 tol=17.3
2024-12-09 05:34:02,272 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=43.9 pTM=0.295 ipTM=0.428 tol=10.5
2024-12-09 05:35:18,723 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=43.9 pTM=0.277 ipTM=0.252 tol=7.29
2024-12-09 05:36:35,266 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=44 pTM=0.27 ipTM=0.197 tol=10.2
2024-12-09 05:37:51,759 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=43.4 pTM=0.27 ipTM=0.2 tol=7.11
2024-12-09 05:39:08,153 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=44.2 pTM=0.297 ipTM=0.45 tol=12.1
2024-12-09 05:40:24,562 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=43.2 pTM=0.275 ipTM=0.233 tol=8.15
2024-12-09 05:41:40,966 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.4 pTM=0.272 ipTM=0.217 tol=8.12
2024-12-09 05:42:57,380 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=44.1 pTM=0.297 ipTM=0.452 tol=9.93
2024-12-09 05:44:13,832 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.7 pTM=0.276 ipTM=0.245 tol=7.41
2024-12-09 05:45:30,259 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.8 pTM=0.273 ipTM=0.228 tol=7.91
2024-12-09 05:46:46,600 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.8 pTM=0.3 ipTM=0.46 tol=12.8
2024-12-09 05:48:03,031 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43.2 pTM=0.274 ipTM=0.224 tol=7.88
2024-12-09 05:49:19,467 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.4 pTM=0.274 ipTM=0.22 tol=7.32
2024-12-09 05:50:35,822 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.2 pTM=0.298 ipTM=0.449 tol=7.65
2024-12-09 05:51:52,260 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.6 pTM=0.277 ipTM=0.249 tol=7.25
2024-12-09 05:53:08,659 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.3 pTM=0.275 ipTM=0.239 tol=8.42
2024-12-09 05:54:25,036 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.4 pTM=0.272 ipTM=0.226 tol=3.94
2024-12-09 05:55:41,392 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.9 pTM=0.298 ipTM=0.441 tol=9.43
2024-12-09 05:56:57,823 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.1 pTM=0.28 ipTM=0.245 tol=8.33
2024-12-09 05:58:14,271 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.4 pTM=0.276 ipTM=0.236 tol=8.68
2024-12-09 05:59:30,709 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43.4 pTM=0.297 ipTM=0.442 tol=8.57
2024-12-09 06:00:47,172 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.5 pTM=0.279 ipTM=0.254 tol=6.25
2024-12-09 06:02:03,619 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.5 pTM=0.275 ipTM=0.231 tol=3.27
2024-12-09 06:03:20,019 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.1 pTM=0.299 ipTM=0.455 tol=5.99
2024-12-09 06:04:36,456 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43 pTM=0.277 ipTM=0.25 tol=8.46
2024-12-09 06:05:52,902 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.2 pTM=0.273 ipTM=0.23 tol=8.4
2024-12-09 06:07:09,305 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.5 pTM=0.29 ipTM=0.388 tol=6.05
2024-12-09 06:07:09,307 alphafold2_multimer_v3_model_5_seed_000 took 2369.4s (30 recycles)
2024-12-09 06:07:10,768 reranking models by 'multimer' metric
2024-12-09 06:07:14,036 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 06:14:36,975 Relaxation took 446.2s
2024-12-09 06:14:36,975 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.1 pTM=0.325 ipTM=0.469
2024-12-09 06:19:37,391 Relaxation took 300.4s
2024-12-09 06:19:37,391 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.5 pTM=0.29 ipTM=0.388
2024-12-09 06:24:54,655 Relaxation took 317.3s
2024-12-09 06:24:54,655 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.8 pTM=0.287 ipTM=0.208
2024-12-09 06:31:44,945 Relaxation took 410.3s
2024-12-09 06:31:44,945 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.8 pTM=0.268 ipTM=0.205
2024-12-09 06:37:56,963 Relaxation took 372.0s
2024-12-09 06:37:56,963 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=47.5 pTM=0.287 ipTM=0.168
2024-12-09 06:38:00,519 Done