2024-12-09 02:55:39,862 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 02:55:40,169 Running on GPU
2024-12-09 02:55:43,730 Found 6 citations for tools or databases
2024-12-09 02:55:43,730 Query 1/1: TRIM39_ZNF718 (length 996)
2024-12-09 02:55:44,033 Sleeping for 5s. Reason: PENDING
2024-12-09 02:55:49,285 Sleeping for 9s. Reason: PENDING
2024-12-09 02:55:58,547 Sleeping for 9s. Reason: PENDING
2024-12-09 02:56:07,811 Sleeping for 5s. Reason: PENDING
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2024-12-09 02:56:22,340 Sleeping for 5s. Reason: PENDING
2024-12-09 02:56:27,606 Sleeping for 8s. Reason: PENDING
2024-12-09 02:56:35,861 Sleeping for 7s. Reason: PENDING
2024-12-09 02:56:43,121 Sleeping for 5s. Reason: PENDING
2024-12-09 02:56:48,376 Sleeping for 7s. Reason: PENDING
2024-12-09 02:56:55,635 Sleeping for 10s. Reason: PENDING
2024-12-09 02:57:05,894 Sleeping for 10s. Reason: PENDING
2024-12-09 02:57:16,152 Sleeping for 6s. Reason: PENDING
2024-12-09 02:57:22,409 Sleeping for 6s. Reason: PENDING
2024-12-09 02:57:28,665 Sleeping for 10s. Reason: PENDING
2024-12-09 02:57:38,930 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:57:49,197 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:57:55,452 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:58:05,717 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:58:12,978 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:58:20,232 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:58:29,491 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:58:36,753 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:58:45,012 Sleeping for 5s. Reason: RUNNING
2024-12-09 02:58:50,271 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:58:58,528 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:59:06,786 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:59:17,044 Sleeping for 10s. Reason: RUNNING
2024-12-09 02:59:27,304 Sleeping for 7s. Reason: RUNNING
2024-12-09 02:59:34,559 Sleeping for 9s. Reason: RUNNING
2024-12-09 02:59:43,817 Sleeping for 8s. Reason: RUNNING
2024-12-09 02:59:52,075 Sleeping for 6s. Reason: RUNNING
2024-12-09 02:59:58,329 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:00:03,586 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:00:08,840 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:00:16,095 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:00:26,351 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:00:35,619 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:00:41,885 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:00:51,148 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:00:56,408 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:01:06,677 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:01:14,946 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:01:22,199 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:01:37,972 Sleeping for 7s. Reason: PENDING
2024-12-09 03:01:45,236 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:01:50,491 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:01:55,749 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:02:02,003 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:02:07,259 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:02:13,512 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:02:19,765 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:02:29,026 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:02:34,288 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:02:40,550 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:02:48,812 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:02:58,076 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:03:08,337 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:03:13,593 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:03:20,849 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:03:31,113 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:03:41,373 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:03:57,100 Setting max_seq=508, max_extra_seq=2048
2024-12-09 03:06:25,622 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.5 pTM=0.298 ipTM=0.16
2024-12-09 03:06:46,791 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.6 pTM=0.318 ipTM=0.163 tol=10
2024-12-09 03:07:07,987 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.8 pTM=0.342 ipTM=0.164 tol=12
2024-12-09 03:07:29,226 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.2 pTM=0.346 ipTM=0.16 tol=5.88
2024-12-09 03:07:50,491 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.8 pTM=0.339 ipTM=0.163 tol=4.4
2024-12-09 03:08:11,766 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.3 pTM=0.346 ipTM=0.199 tol=3.36
2024-12-09 03:08:33,088 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.2 pTM=0.345 ipTM=0.214 tol=2.41
2024-12-09 03:08:54,432 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.6 pTM=0.345 ipTM=0.19 tol=2.18
2024-12-09 03:09:15,783 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.5 pTM=0.344 ipTM=0.181 tol=1.94
2024-12-09 03:09:37,125 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.2 pTM=0.345 ipTM=0.176 tol=1.54
2024-12-09 03:09:58,461 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.1 pTM=0.344 ipTM=0.164 tol=1.54
2024-12-09 03:10:19,812 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.3 pTM=0.339 ipTM=0.15 tol=2.54
2024-12-09 03:10:41,155 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.1 pTM=0.339 ipTM=0.152 tol=2.56
2024-12-09 03:11:02,514 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.1 pTM=0.338 ipTM=0.152 tol=3.21
2024-12-09 03:11:23,863 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.9 pTM=0.34 ipTM=0.155 tol=1.6
2024-12-09 03:11:45,218 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.2 pTM=0.348 ipTM=0.162 tol=2.1
2024-12-09 03:12:06,579 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.2 pTM=0.347 ipTM=0.162 tol=2.34
2024-12-09 03:12:27,941 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59 pTM=0.351 ipTM=0.162 tol=2.25
2024-12-09 03:12:49,304 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.8 pTM=0.345 ipTM=0.156 tol=1.63
2024-12-09 03:13:10,676 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.8 pTM=0.346 ipTM=0.159 tol=3.15
2024-12-09 03:13:32,058 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.8 pTM=0.35 ipTM=0.171 tol=2.44
2024-12-09 03:13:53,445 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.9 pTM=0.345 ipTM=0.168 tol=0.992
2024-12-09 03:14:14,827 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.7 pTM=0.345 ipTM=0.16 tol=2.62
2024-12-09 03:14:36,211 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.2 pTM=0.351 ipTM=0.16 tol=2.83
2024-12-09 03:14:57,631 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.2 pTM=0.352 ipTM=0.188 tol=1.32
2024-12-09 03:15:19,044 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.2 pTM=0.348 ipTM=0.168 tol=1.05
2024-12-09 03:15:40,460 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.2 pTM=0.348 ipTM=0.157 tol=1.27
2024-12-09 03:16:01,894 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.9 pTM=0.346 ipTM=0.155 tol=1.63
2024-12-09 03:16:23,315 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.9 pTM=0.346 ipTM=0.154 tol=2.98
2024-12-09 03:16:44,719 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.2 pTM=0.345 ipTM=0.153 tol=2.9
2024-12-09 03:17:06,153 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.1 pTM=0.348 ipTM=0.152 tol=1.88
2024-12-09 03:17:06,154 alphafold2_multimer_v3_model_1_seed_000 took 784.2s (30 recycles)
2024-12-09 03:17:28,180 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.8 pTM=0.301 ipTM=0.144
2024-12-09 03:17:49,573 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54 pTM=0.33 ipTM=0.247 tol=14.2
2024-12-09 03:18:10,940 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.6 pTM=0.37 ipTM=0.247 tol=6.29
2024-12-09 03:18:32,322 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.2 pTM=0.374 ipTM=0.25 tol=4.9
2024-12-09 03:18:53,725 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.1 pTM=0.37 ipTM=0.234 tol=1.64
2024-12-09 03:19:15,112 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.6 pTM=0.374 ipTM=0.249 tol=2.13
2024-12-09 03:19:36,514 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.2 pTM=0.371 ipTM=0.237 tol=1.38
2024-12-09 03:19:57,856 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.4 pTM=0.367 ipTM=0.234 tol=1.06
2024-12-09 03:20:19,201 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.4 pTM=0.369 ipTM=0.239 tol=1.62
2024-12-09 03:20:40,547 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.4 pTM=0.369 ipTM=0.236 tol=2.05
2024-12-09 03:21:01,904 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.8 pTM=0.37 ipTM=0.237 tol=3.6
2024-12-09 03:21:23,264 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.8 pTM=0.367 ipTM=0.207 tol=7.02
2024-12-09 03:21:44,632 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.5 pTM=0.371 ipTM=0.243 tol=2.61
2024-12-09 03:22:05,987 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.6 pTM=0.391 ipTM=0.406 tol=6.93
2024-12-09 03:22:27,353 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.1 pTM=0.364 ipTM=0.211 tol=3.18
2024-12-09 03:22:48,760 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.2 pTM=0.371 ipTM=0.233 tol=3.73
2024-12-09 03:23:10,174 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.1 pTM=0.368 ipTM=0.241 tol=2.6
2024-12-09 03:23:31,602 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.3 pTM=0.371 ipTM=0.235 tol=1.39
2024-12-09 03:23:53,027 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.2 pTM=0.372 ipTM=0.239 tol=1.67
2024-12-09 03:24:14,432 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.2 pTM=0.374 ipTM=0.278 tol=1.62
2024-12-09 03:24:35,839 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.2 pTM=0.372 ipTM=0.288 tol=2.33
2024-12-09 03:24:57,266 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.2 pTM=0.364 ipTM=0.243 tol=2.06
2024-12-09 03:25:18,692 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.3 pTM=0.369 ipTM=0.259 tol=1.78
2024-12-09 03:25:40,096 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.8 pTM=0.372 ipTM=0.26 tol=2.19
2024-12-09 03:26:01,498 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.2 pTM=0.37 ipTM=0.275 tol=1.59
2024-12-09 03:26:22,897 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57 pTM=0.367 ipTM=0.241 tol=1.85
2024-12-09 03:26:44,283 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.3 pTM=0.368 ipTM=0.253 tol=2.1
2024-12-09 03:27:05,646 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.1 pTM=0.371 ipTM=0.265 tol=1.88
2024-12-09 03:27:27,047 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.9 pTM=0.371 ipTM=0.294 tol=1.35
2024-12-09 03:27:48,448 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.2 pTM=0.371 ipTM=0.269 tol=1.77
2024-12-09 03:28:09,831 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.9 pTM=0.371 ipTM=0.252 tol=1.64
2024-12-09 03:28:09,832 alphafold2_multimer_v3_model_2_seed_000 took 663.1s (30 recycles)
2024-12-09 03:28:31,995 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.8 pTM=0.304 ipTM=0.161
2024-12-09 03:28:53,446 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.1 pTM=0.361 ipTM=0.402 tol=24.1
2024-12-09 03:29:14,867 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.5 pTM=0.338 ipTM=0.16 tol=13.6
2024-12-09 03:29:36,269 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.5 pTM=0.374 ipTM=0.316 tol=10.9
2024-12-09 03:29:57,681 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.7 pTM=0.354 ipTM=0.213 tol=3.97
2024-12-09 03:30:19,114 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.2 pTM=0.353 ipTM=0.192 tol=3.09
2024-12-09 03:30:40,529 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.9 pTM=0.348 ipTM=0.165 tol=1.67
2024-12-09 03:31:01,959 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.3 pTM=0.35 ipTM=0.171 tol=2
2024-12-09 03:31:23,349 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.5 pTM=0.361 ipTM=0.222 tol=8.04
2024-12-09 03:31:44,756 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.5 pTM=0.358 ipTM=0.202 tol=3.52
2024-12-09 03:32:06,143 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55.3 pTM=0.362 ipTM=0.181 tol=5.5
2024-12-09 03:32:27,557 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.6 pTM=0.356 ipTM=0.165 tol=3.29
2024-12-09 03:32:48,909 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.9 pTM=0.398 ipTM=0.439 tol=4.78
2024-12-09 03:33:10,311 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.6 pTM=0.357 ipTM=0.169 tol=6
2024-12-09 03:33:31,708 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55.3 pTM=0.36 ipTM=0.183 tol=3.32
2024-12-09 03:33:53,108 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.8 pTM=0.404 ipTM=0.461 tol=4.07
2024-12-09 03:34:14,514 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55.2 pTM=0.357 ipTM=0.167 tol=4.31
2024-12-09 03:34:35,906 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.7 pTM=0.37 ipTM=0.224 tol=9.46
2024-12-09 03:34:57,292 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.6 pTM=0.366 ipTM=0.215 tol=4.56
2024-12-09 03:35:18,684 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.6 pTM=0.407 ipTM=0.468 tol=6.37
2024-12-09 03:35:40,098 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.2 pTM=0.359 ipTM=0.162 tol=7.11
2024-12-09 03:36:01,526 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.6 pTM=0.361 ipTM=0.18 tol=5.64
2024-12-09 03:36:22,919 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56 pTM=0.4 ipTM=0.431 tol=6.86
2024-12-09 03:36:44,359 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.8 pTM=0.362 ipTM=0.169 tol=5.14
2024-12-09 03:37:05,756 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.4 pTM=0.371 ipTM=0.23 tol=9.27
2024-12-09 03:37:27,155 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.9 pTM=0.366 ipTM=0.231 tol=4.61
2024-12-09 03:37:48,518 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.6 pTM=0.408 ipTM=0.456 tol=7.64
2024-12-09 03:38:09,923 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.6 pTM=0.36 ipTM=0.17 tol=7.27
2024-12-09 03:38:31,302 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.1 pTM=0.363 ipTM=0.176 tol=5.23
2024-12-09 03:38:52,679 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.8 pTM=0.375 ipTM=0.246 tol=3.85
2024-12-09 03:39:14,044 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.7 pTM=0.382 ipTM=0.255 tol=7.86
2024-12-09 03:39:14,045 alphafold2_multimer_v3_model_3_seed_000 took 663.6s (30 recycles)
2024-12-09 03:39:36,142 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.6 pTM=0.304 ipTM=0.194
2024-12-09 03:39:57,583 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.1 pTM=0.307 ipTM=0.189 tol=30.2
2024-12-09 03:40:18,989 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.4 pTM=0.337 ipTM=0.243 tol=10.3
2024-12-09 03:40:40,393 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.4 pTM=0.332 ipTM=0.208 tol=4.13
2024-12-09 03:41:01,810 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.1 pTM=0.33 ipTM=0.196 tol=4
2024-12-09 03:41:23,242 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.6 pTM=0.33 ipTM=0.192 tol=5.86
2024-12-09 03:41:44,673 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.3 pTM=0.327 ipTM=0.176 tol=4.22
2024-12-09 03:42:06,103 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.6 pTM=0.328 ipTM=0.177 tol=3.62
2024-12-09 03:42:27,517 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58 pTM=0.362 ipTM=0.396 tol=6.63
2024-12-09 03:42:48,971 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.5 pTM=0.332 ipTM=0.203 tol=7.29
2024-12-09 03:43:10,424 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.2 pTM=0.333 ipTM=0.198 tol=8.73
2024-12-09 03:43:31,866 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.4 pTM=0.333 ipTM=0.204 tol=7.48
2024-12-09 03:43:53,313 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.4 pTM=0.333 ipTM=0.212 tol=5.33
2024-12-09 03:44:14,752 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.9 pTM=0.329 ipTM=0.198 tol=3.9
2024-12-09 03:44:36,179 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.9 pTM=0.329 ipTM=0.197 tol=5.25
2024-12-09 03:44:57,613 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.3 pTM=0.33 ipTM=0.187 tol=6.62
2024-12-09 03:45:19,030 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.5 pTM=0.357 ipTM=0.369 tol=6.66
2024-12-09 03:45:40,473 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57 pTM=0.335 ipTM=0.208 tol=7
2024-12-09 03:46:01,894 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.9 pTM=0.336 ipTM=0.212 tol=7.77
2024-12-09 03:46:23,304 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.9 pTM=0.361 ipTM=0.387 tol=7.55
2024-12-09 03:46:44,745 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.8 pTM=0.336 ipTM=0.211 tol=7.39
2024-12-09 03:47:06,174 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.1 pTM=0.33 ipTM=0.208 tol=5.74
2024-12-09 03:47:27,618 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.8 pTM=0.333 ipTM=0.217 tol=7.6
2024-12-09 03:47:49,039 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.6 pTM=0.329 ipTM=0.192 tol=8.4
2024-12-09 03:48:10,477 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.3 pTM=0.335 ipTM=0.213 tol=5.05
2024-12-09 03:48:31,908 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.2 pTM=0.328 ipTM=0.195 tol=5.01
2024-12-09 03:48:53,336 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.8 pTM=0.342 ipTM=0.241 tol=10.3
2024-12-09 03:49:14,755 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.8 pTM=0.327 ipTM=0.193 tol=9.52
2024-12-09 03:49:36,182 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.1 pTM=0.345 ipTM=0.284 tol=10.4
2024-12-09 03:49:57,597 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.6 pTM=0.343 ipTM=0.26 tol=8.98
2024-12-09 03:50:18,998 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.5 pTM=0.373 ipTM=0.425 tol=15.9
2024-12-09 03:50:18,999 alphafold2_multimer_v3_model_4_seed_000 took 664.3s (30 recycles)
2024-12-09 03:50:41,134 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52 pTM=0.297 ipTM=0.158
2024-12-09 03:51:02,604 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.2 pTM=0.297 ipTM=0.159 tol=22.2
2024-12-09 03:51:24,014 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.7 pTM=0.344 ipTM=0.265 tol=15.2
2024-12-09 03:51:45,411 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.5 pTM=0.355 ipTM=0.237 tol=5.1
2024-12-09 03:52:06,802 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.4 pTM=0.377 ipTM=0.411 tol=6.32
2024-12-09 03:52:28,181 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54 pTM=0.354 ipTM=0.2 tol=7.19
2024-12-09 03:52:49,558 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.5 pTM=0.359 ipTM=0.224 tol=7.45
2024-12-09 03:53:10,912 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.3 pTM=0.388 ipTM=0.45 tol=8.05
2024-12-09 03:53:32,289 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.9 pTM=0.358 ipTM=0.235 tol=4.98
2024-12-09 03:53:53,694 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54 pTM=0.358 ipTM=0.198 tol=4.04
2024-12-09 03:54:15,095 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.3 pTM=0.363 ipTM=0.199 tol=4.01
2024-12-09 03:54:36,487 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.8 pTM=0.369 ipTM=0.269 tol=6.1
2024-12-09 03:54:57,842 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.1 pTM=0.365 ipTM=0.247 tol=3.27
2024-12-09 03:55:19,214 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.9 pTM=0.386 ipTM=0.406 tol=5.43
2024-12-09 03:55:40,593 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.8 pTM=0.365 ipTM=0.243 tol=3.83
2024-12-09 03:56:01,974 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.3 pTM=0.365 ipTM=0.206 tol=5.38
2024-12-09 03:56:23,342 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.5 pTM=0.375 ipTM=0.3 tol=3.02
2024-12-09 03:56:44,692 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.5 pTM=0.375 ipTM=0.287 tol=3.49
2024-12-09 03:57:06,100 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.3 pTM=0.384 ipTM=0.382 tol=5.45
2024-12-09 03:57:27,529 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.9 pTM=0.363 ipTM=0.207 tol=4.77
2024-12-09 03:57:48,968 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.8 pTM=0.369 ipTM=0.229 tol=3.07
2024-12-09 03:58:10,425 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.3 pTM=0.365 ipTM=0.237 tol=3.76
2024-12-09 03:58:31,863 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.5 pTM=0.379 ipTM=0.352 tol=3.96
2024-12-09 03:58:53,312 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.5 pTM=0.366 ipTM=0.251 tol=2.84
2024-12-09 03:59:14,746 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.2 pTM=0.372 ipTM=0.273 tol=6.57
2024-12-09 03:59:36,191 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.2 pTM=0.366 ipTM=0.248 tol=3.54
2024-12-09 03:59:57,620 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.9 pTM=0.377 ipTM=0.342 tol=5.16
2024-12-09 04:00:19,074 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.3 pTM=0.373 ipTM=0.303 tol=5.95
2024-12-09 04:00:40,503 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.1 pTM=0.372 ipTM=0.292 tol=2.82
2024-12-09 04:01:01,923 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.7 pTM=0.381 ipTM=0.388 tol=5.83
2024-12-09 04:01:23,358 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.4 pTM=0.366 ipTM=0.243 tol=3.95
2024-12-09 04:01:23,359 alphafold2_multimer_v3_model_5_seed_000 took 663.7s (30 recycles)
2024-12-09 04:01:23,976 reranking models by 'multimer' metric
2024-12-09 04:01:26,545 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 04:04:19,483 Relaxation took 175.5s
2024-12-09 04:04:19,483 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.5 pTM=0.373 ipTM=0.425
2024-12-09 04:06:28,790 Relaxation took 129.3s
2024-12-09 04:06:28,790 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.7 pTM=0.382 ipTM=0.255
2024-12-09 04:08:45,327 Relaxation took 136.5s
2024-12-09 04:08:45,327 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.9 pTM=0.371 ipTM=0.252
2024-12-09 04:11:27,035 Relaxation took 161.7s
2024-12-09 04:11:27,035 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.4 pTM=0.366 ipTM=0.243
2024-12-09 04:13:10,515 Relaxation took 103.5s
2024-12-09 04:13:10,516 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.1 pTM=0.348 ipTM=0.152
2024-12-09 04:13:12,688 Done