2024-12-09 03:14:24,426 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 03:14:24,739 Running on GPU
2024-12-09 03:14:28,457 Found 6 citations for tools or databases
2024-12-09 03:14:28,458 Query 1/1: TRIM41_ALPK2 (length 2800)
2024-12-09 03:14:28,751 Sleeping for 10s. Reason: PENDING
2024-12-09 03:14:39,015 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:14:49,277 Sleeping for 7s. Reason: RUNNING
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2024-12-09 03:15:06,144 Sleeping for 8s. Reason: RUNNING
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2024-12-09 03:15:39,168 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:15:44,422 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:15:53,683 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:16:01,940 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:16:12,204 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:16:21,467 Sleeping for 5s. Reason: RUNNING
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2024-12-09 03:16:31,980 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:16:39,241 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:16:46,504 Sleeping for 9s. Reason: RUNNING
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2024-12-09 03:17:04,030 Sleeping for 6s. Reason: RUNNING
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2024-12-09 03:17:19,544 Sleeping for 5s. Reason: RUNNING
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2024-12-09 03:17:34,066 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:17:43,324 Sleeping for 7s. Reason: RUNNING
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2024-12-09 03:18:08,098 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:18:15,354 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:18:20,609 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:18:30,877 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:18:41,138 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:18:46,399 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:18:56,663 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:19:03,925 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:19:10,186 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:19:19,441 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:19:25,708 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:19:32,975 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:19:38,231 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:19:48,488 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:19:56,745 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:20:06,008 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:20:15,269 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:20:22,527 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:20:28,782 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:20:39,049 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:20:49,314 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:20:55,575 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:21:02,831 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:21:13,097 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:21:21,354 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:21:30,611 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:21:40,876 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:21:51,139 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:22:00,404 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:22:07,666 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:22:12,935 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:22:21,195 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:22:27,455 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:22:33,718 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:22:41,975 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:22:50,392 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:22:55,645 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:23:05,902 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:23:14,160 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:23:20,764 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:23:28,027 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:23:34,279 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:23:40,537 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:23:50,797 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:23:58,058 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:24:06,318 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:24:12,575 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:24:23,135 Sleeping for 5s. Reason: PENDING
2024-12-09 03:24:28,392 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:24:33,646 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:24:38,904 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:24:45,156 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:24:54,419 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:25:00,674 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:25:07,928 Sleeping for 10s. Reason: RUNNING
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2024-12-09 03:25:31,712 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:25:36,967 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:25:47,225 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:25:55,484 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:26:01,744 Sleeping for 8s. Reason: RUNNING
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2024-12-09 03:26:20,270 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:26:26,522 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:26:32,779 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:26:38,036 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:26:44,292 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:26:49,555 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:26:57,817 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:27:04,067 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:27:14,330 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:27:21,592 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:27:27,846 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:27:37,109 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:27:44,365 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:27:52,625 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:27:57,881 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:28:06,139 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:28:12,398 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:28:22,657 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:28:29,916 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:28:36,183 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:28:46,447 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:28:59,456 Setting max_seq=508, max_extra_seq=2048
2024-12-09 03:38:09,619 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=31.9 pTM=0.315 ipTM=0.262
2024-12-09 03:45:10,067 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=30.4 pTM=0.299 ipTM=0.289 tol=31.4
2024-12-09 03:52:10,576 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=30.3 pTM=0.299 ipTM=0.288 tol=22.7
2024-12-09 03:59:11,273 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=30.4 pTM=0.3 ipTM=0.293 tol=20.8
2024-12-09 04:06:11,892 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=30 pTM=0.301 ipTM=0.291 tol=17.7
2024-12-09 04:13:12,555 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=30.1 pTM=0.301 ipTM=0.291 tol=14.8
2024-12-09 04:20:13,058 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=30.2 pTM=0.311 ipTM=0.295 tol=25.9
2024-12-09 04:27:13,853 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=30 pTM=0.299 ipTM=0.292 tol=23.9
2024-12-09 04:34:14,579 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=30 pTM=0.298 ipTM=0.292 tol=18.3
2024-12-09 04:41:15,394 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=30.6 pTM=0.313 ipTM=0.296 tol=22
2024-12-09 04:48:16,161 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=30.1 pTM=0.305 ipTM=0.294 tol=22.5
2024-12-09 04:55:16,792 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=30.1 pTM=0.305 ipTM=0.295 tol=19.9
2024-12-09 05:02:17,498 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=30 pTM=0.305 ipTM=0.297 tol=19
2024-12-09 05:09:18,092 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=30.2 pTM=0.305 ipTM=0.295 tol=28.6
2024-12-09 05:16:18,921 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=30.1 pTM=0.305 ipTM=0.296 tol=20
2024-12-09 05:23:19,606 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=30.3 pTM=0.306 ipTM=0.295 tol=15.6
2024-12-09 05:30:20,204 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=30 pTM=0.306 ipTM=0.295 tol=21.9
2024-12-09 05:37:20,937 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=30.1 pTM=0.303 ipTM=0.295 tol=19
2024-12-09 05:44:21,643 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=30.1 pTM=0.305 ipTM=0.298 tol=19.2
2024-12-09 05:51:22,269 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=30.1 pTM=0.303 ipTM=0.295 tol=20.7
2024-12-09 05:58:22,782 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=30.2 pTM=0.306 ipTM=0.298 tol=16.7
2024-12-09 06:05:23,312 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=30 pTM=0.304 ipTM=0.296 tol=19.9
2024-12-09 06:12:23,876 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=30.2 pTM=0.306 ipTM=0.297 tol=18.8
2024-12-09 06:19:24,449 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=30 pTM=0.304 ipTM=0.298 tol=20.4
2024-12-09 06:26:24,939 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=30.4 pTM=0.307 ipTM=0.299 tol=15.8
2024-12-09 06:33:25,399 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=29.8 pTM=0.305 ipTM=0.299 tol=15.5
2024-12-09 06:40:25,975 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=30.2 pTM=0.307 ipTM=0.298 tol=14.9
2024-12-09 06:47:26,417 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=30 pTM=0.305 ipTM=0.298 tol=14.8
2024-12-09 06:54:27,055 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=30.1 pTM=0.306 ipTM=0.296 tol=16.2
2024-12-09 07:01:27,608 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=30.1 pTM=0.304 ipTM=0.298 tol=21.7
2024-12-09 07:08:28,289 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=30 pTM=0.306 ipTM=0.299 tol=24.8
2024-12-09 07:08:28,293 alphafold2_multimer_v3_model_1_seed_000 took 13163.9s (30 recycles)
2024-12-09 07:15:32,928 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=31.7 pTM=0.294 ipTM=0.253
2024-12-09 07:22:33,785 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=32.3 pTM=0.302 ipTM=0.263 tol=24.7
2024-12-09 07:29:34,629 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=32.3 pTM=0.301 ipTM=0.266 tol=15.4
2024-12-09 07:36:35,538 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=32.7 pTM=0.301 ipTM=0.265 tol=14.5
2024-12-09 07:43:36,450 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=32.6 pTM=0.303 ipTM=0.267 tol=14.9
2024-12-09 07:50:37,349 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=32.6 pTM=0.301 ipTM=0.266 tol=13.3
2024-12-09 07:57:38,179 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=32.9 pTM=0.3 ipTM=0.258 tol=13.1
2024-12-09 08:04:39,117 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=32.7 pTM=0.3 ipTM=0.26 tol=11.1
2024-12-09 08:11:40,083 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=32.8 pTM=0.3 ipTM=0.261 tol=11
2024-12-09 08:18:40,964 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=32.9 pTM=0.3 ipTM=0.26 tol=9.2
2024-12-09 08:25:41,896 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=32.6 pTM=0.301 ipTM=0.26 tol=9.71
2024-12-09 08:32:42,880 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=32.7 pTM=0.3 ipTM=0.26 tol=10.1
2024-12-09 08:39:43,891 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=32.5 pTM=0.3 ipTM=0.261 tol=7.92
2024-12-09 08:46:44,878 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=32.6 pTM=0.3 ipTM=0.258 tol=9.34
2024-12-09 08:53:45,928 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=32.2 pTM=0.307 ipTM=0.259 tol=15
2024-12-09 09:00:46,920 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=32.5 pTM=0.299 ipTM=0.254 tol=17
2024-12-09 09:07:47,890 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=32.5 pTM=0.3 ipTM=0.254 tol=14
2024-12-09 09:14:48,903 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=32.5 pTM=0.301 ipTM=0.259 tol=9.92
2024-12-09 09:21:49,947 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=32.5 pTM=0.301 ipTM=0.26 tol=11.4
2024-12-09 09:28:50,934 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=32.8 pTM=0.3 ipTM=0.261 tol=10.4
2024-12-09 09:35:51,930 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=32.6 pTM=0.3 ipTM=0.267 tol=10.6
2024-12-09 09:42:52,833 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=32.4 pTM=0.3 ipTM=0.27 tol=10.2
2024-12-09 09:49:53,697 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=32.2 pTM=0.299 ipTM=0.274 tol=12.3
2024-12-09 09:56:54,636 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=32.6 pTM=0.298 ipTM=0.283 tol=17
2024-12-09 10:03:55,572 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=33.1 pTM=0.298 ipTM=0.292 tol=15
2024-12-09 10:10:56,581 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=33.1 pTM=0.31 ipTM=0.292 tol=17
2024-12-09 10:17:57,477 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=32.8 pTM=0.301 ipTM=0.29 tol=13.9
2024-12-09 10:24:58,337 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=33 pTM=0.302 ipTM=0.296 tol=11.8
2024-12-09 10:31:59,264 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=33 pTM=0.3 ipTM=0.294 tol=11.6
2024-12-09 10:39:00,096 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=32.9 pTM=0.301 ipTM=0.3 tol=11.4
2024-12-09 10:46:00,988 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=32.9 pTM=0.301 ipTM=0.302 tol=12.5
2024-12-09 10:46:00,992 alphafold2_multimer_v3_model_2_seed_000 took 13048.3s (30 recycles)
2024-12-09 10:53:06,078 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.2 pTM=0.299 ipTM=0.245
2024-12-09 11:00:07,653 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=30.8 pTM=0.299 ipTM=0.272 tol=28.6
2024-12-09 11:07:09,754 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=30.6 pTM=0.294 ipTM=0.267 tol=25.1
2024-12-09 11:14:12,047 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=30.7 pTM=0.295 ipTM=0.277 tol=24.9
2024-12-09 11:21:14,339 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=30.9 pTM=0.295 ipTM=0.274 tol=31.9
2024-12-09 11:28:16,600 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=31.1 pTM=0.296 ipTM=0.271 tol=27.7
2024-12-09 11:35:18,977 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=31.1 pTM=0.294 ipTM=0.273 tol=32.8
2024-12-09 11:42:21,313 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=31.1 pTM=0.296 ipTM=0.271 tol=26.4
2024-12-09 11:49:23,658 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=31.2 pTM=0.294 ipTM=0.271 tol=27.8
2024-12-09 11:56:25,956 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=31.2 pTM=0.295 ipTM=0.272 tol=29.7
2024-12-09 12:03:28,234 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=31 pTM=0.295 ipTM=0.272 tol=28.6
2024-12-09 12:10:30,463 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=31 pTM=0.294 ipTM=0.273 tol=25.8
2024-12-09 12:17:32,804 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=31.4 pTM=0.294 ipTM=0.275 tol=28.7
2024-12-09 12:24:34,969 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=31 pTM=0.294 ipTM=0.275 tol=32
2024-12-09 12:31:37,218 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=31.5 pTM=0.31 ipTM=0.278 tol=27
2024-12-09 12:38:39,551 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=31.5 pTM=0.295 ipTM=0.272 tol=19.8
2024-12-09 12:45:41,873 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=31.5 pTM=0.299 ipTM=0.283 tol=15.4
2024-12-09 12:52:44,180 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=31.8 pTM=0.305 ipTM=0.274 tol=19.1
2024-12-09 12:59:46,416 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=31.5 pTM=0.298 ipTM=0.279 tol=19.5
2024-12-09 13:06:48,719 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=31.6 pTM=0.296 ipTM=0.269 tol=21.4
2024-12-09 13:13:51,049 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=31.3 pTM=0.305 ipTM=0.275 tol=34.2
2024-12-09 13:20:53,139 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=30.6 pTM=0.299 ipTM=0.277 tol=30.5
2024-12-09 13:27:55,547 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=30.8 pTM=0.303 ipTM=0.275 tol=21.5
2024-12-09 13:34:57,796 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=31.1 pTM=0.299 ipTM=0.279 tol=22.7
2024-12-09 13:42:00,097 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=31.1 pTM=0.307 ipTM=0.281 tol=23
2024-12-09 13:49:02,417 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=31.1 pTM=0.298 ipTM=0.28 tol=23.3
2024-12-09 13:56:04,793 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=31.2 pTM=0.306 ipTM=0.28 tol=21.6
2024-12-09 14:03:07,070 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=31.2 pTM=0.302 ipTM=0.285 tol=20.6
2024-12-09 14:10:09,506 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=30.9 pTM=0.299 ipTM=0.281 tol=20.5
2024-12-09 14:17:11,698 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=31.3 pTM=0.311 ipTM=0.289 tol=20.2
2024-12-09 14:24:13,836 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=30.9 pTM=0.301 ipTM=0.283 tol=20.1
2024-12-09 14:24:13,840 alphafold2_multimer_v3_model_3_seed_000 took 13088.4s (30 recycles)
2024-12-09 14:31:20,025 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=32 pTM=0.297 ipTM=0.229
2024-12-09 14:38:23,413 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=31.4 pTM=0.312 ipTM=0.26 tol=25.8
2024-12-09 14:45:26,672 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=31.1 pTM=0.311 ipTM=0.263 tol=24.5
2024-12-09 14:52:30,275 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=31.2 pTM=0.312 ipTM=0.271 tol=22
2024-12-09 14:59:33,754 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=30.9 pTM=0.308 ipTM=0.272 tol=22.2
2024-12-09 15:06:37,119 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31 pTM=0.31 ipTM=0.271 tol=19.5
2024-12-09 15:13:40,385 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=31 pTM=0.307 ipTM=0.273 tol=21.4
2024-12-09 15:20:43,689 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.2 pTM=0.308 ipTM=0.271 tol=21.2
2024-12-09 15:27:46,883 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31 pTM=0.307 ipTM=0.271 tol=20.2
2024-12-09 15:34:50,068 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=30.8 pTM=0.308 ipTM=0.273 tol=20.7
2024-12-09 15:41:53,049 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=30.9 pTM=0.309 ipTM=0.272 tol=22.7
2024-12-09 15:48:56,349 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=30.7 pTM=0.312 ipTM=0.271 tol=20.8
2024-12-09 15:55:59,646 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=30.7 pTM=0.311 ipTM=0.274 tol=21
2024-12-09 16:03:02,709 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=30.9 pTM=0.311 ipTM=0.27 tol=24.3
2024-12-09 16:10:06,034 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=30.8 pTM=0.307 ipTM=0.268 tol=23.7
2024-12-09 16:17:09,621 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=30.4 pTM=0.306 ipTM=0.268 tol=26.6
2024-12-09 16:24:12,847 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=30.7 pTM=0.306 ipTM=0.272 tol=27.7
2024-12-09 16:31:16,196 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=31 pTM=0.305 ipTM=0.267 tol=26
2024-12-09 16:38:19,202 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=30.8 pTM=0.31 ipTM=0.272 tol=22.9
2024-12-09 16:45:22,352 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31.1 pTM=0.309 ipTM=0.265 tol=21
2024-12-09 16:52:25,610 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=30.9 pTM=0.308 ipTM=0.266 tol=23.7
2024-12-09 16:59:28,800 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=30.7 pTM=0.307 ipTM=0.268 tol=21.6
2024-12-09 17:06:31,863 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=30.8 pTM=0.306 ipTM=0.266 tol=24
2024-12-09 17:13:35,189 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=30.5 pTM=0.307 ipTM=0.269 tol=20.6
2024-12-09 17:20:38,556 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=30.8 pTM=0.307 ipTM=0.27 tol=22.6
2024-12-09 17:27:41,958 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=30.7 pTM=0.305 ipTM=0.264 tol=21.6
2024-12-09 17:34:45,172 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=30.7 pTM=0.307 ipTM=0.267 tol=19.6
2024-12-09 17:41:48,441 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=30.8 pTM=0.309 ipTM=0.267 tol=20.9
2024-12-09 17:48:51,917 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=31 pTM=0.307 ipTM=0.267 tol=20.9
2024-12-09 17:55:54,979 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=31 pTM=0.311 ipTM=0.268 tol=26.5
2024-12-09 18:02:58,078 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=30.8 pTM=0.31 ipTM=0.27 tol=24.5
2024-12-09 18:02:58,082 alphafold2_multimer_v3_model_4_seed_000 took 13119.8s (30 recycles)
2024-12-09 18:10:04,889 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=32.1 pTM=0.29 ipTM=0.231
2024-12-09 18:17:08,026 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=31.2 pTM=0.288 ipTM=0.244 tol=30.9
2024-12-09 18:24:11,274 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31.5 pTM=0.288 ipTM=0.242 tol=28.6
2024-12-09 18:31:14,596 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=31.8 pTM=0.295 ipTM=0.241 tol=25
2024-12-09 18:38:17,619 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=31.7 pTM=0.302 ipTM=0.244 tol=35.4
2024-12-09 18:45:20,854 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=31.1 pTM=0.291 ipTM=0.241 tol=30.3
2024-12-09 18:52:23,887 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=31.5 pTM=0.293 ipTM=0.243 tol=29.4
2024-12-09 18:59:27,237 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=31.2 pTM=0.301 ipTM=0.24 tol=26.2
2024-12-09 19:06:30,275 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=31.2 pTM=0.303 ipTM=0.246 tol=22.3
2024-12-09 19:13:33,367 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=30.8 pTM=0.293 ipTM=0.243 tol=23.1
2024-12-09 19:20:36,520 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=31.3 pTM=0.3 ipTM=0.243 tol=31
2024-12-09 19:27:39,759 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=31.2 pTM=0.295 ipTM=0.244 tol=21.9
2024-12-09 19:34:42,879 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=31.5 pTM=0.3 ipTM=0.246 tol=27.4
2024-12-09 19:41:46,059 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=31.1 pTM=0.296 ipTM=0.245 tol=32.4
2024-12-09 19:48:49,261 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=31.1 pTM=0.298 ipTM=0.244 tol=25.7
2024-12-09 19:55:52,613 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=30.9 pTM=0.295 ipTM=0.244 tol=29.6
2024-12-09 20:02:55,784 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=31.2 pTM=0.296 ipTM=0.243 tol=28.1
2024-12-09 20:09:58,842 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=31.1 pTM=0.296 ipTM=0.246 tol=32.3
2024-12-09 20:17:01,857 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=31 pTM=0.298 ipTM=0.244 tol=29
2024-12-09 20:24:05,062 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=30.9 pTM=0.293 ipTM=0.243 tol=28
2024-12-09 20:31:08,390 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=31.2 pTM=0.297 ipTM=0.242 tol=27.2
2024-12-09 20:38:11,589 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=31 pTM=0.296 ipTM=0.244 tol=22.7
2024-12-09 20:45:14,833 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=31 pTM=0.298 ipTM=0.244 tol=28.4
2024-12-09 20:52:17,874 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=30.7 pTM=0.293 ipTM=0.252 tol=31
2024-12-09 20:59:21,182 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=31.1 pTM=0.3 ipTM=0.259 tol=31.7
2024-12-09 21:06:24,157 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=30.8 pTM=0.292 ipTM=0.259 tol=27.5
2024-12-09 21:13:27,441 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=31.3 pTM=0.302 ipTM=0.258 tol=29.1
2024-12-09 21:20:30,576 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=30.8 pTM=0.296 ipTM=0.249 tol=30.5
2024-12-09 21:27:33,820 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=30.8 pTM=0.295 ipTM=0.244 tol=30.1
2024-12-09 21:34:36,940 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=30.9 pTM=0.296 ipTM=0.242 tol=25.3
2024-12-09 21:41:39,967 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=30.7 pTM=0.294 ipTM=0.245 tol=30.3
2024-12-09 21:41:39,972 alphafold2_multimer_v3_model_5_seed_000 took 13117.5s (30 recycles)
2024-12-09 21:41:44,419 reranking models by 'multimer' metric
2024-12-09 21:41:47,121 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 21:57:06,757 Relaxation took 922.3s
2024-12-09 21:57:06,757 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=32.9 pTM=0.301 ipTM=0.302
2024-12-09 23:08:54,686 Relaxation took 4307.9s
2024-12-09 23:08:54,686 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=30 pTM=0.306 ipTM=0.299
2024-12-09 23:23:47,359 Relaxation took 892.7s
2024-12-09 23:23:47,359 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=30.9 pTM=0.301 ipTM=0.283
2024-12-09 23:40:41,395 Relaxation took 1014.0s
2024-12-09 23:40:41,395 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=30.8 pTM=0.31 ipTM=0.27
2024-12-09 23:56:54,809 Relaxation took 973.4s
2024-12-09 23:56:54,810 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=30.7 pTM=0.294 ipTM=0.245
2024-12-09 23:57:04,771 Done