2024-12-09 03:28:31,953 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 03:28:32,284 Running on GPU
2024-12-09 03:28:35,963 Found 6 citations for tools or databases
2024-12-09 03:28:35,963 Query 1/1: TRIM41_SRP14 (length 766)
2024-12-09 03:28:36,254 Sleeping for 10s. Reason: PENDING
2024-12-09 03:28:46,510 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:28:55,764 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:29:01,022 Sleeping for 5s. Reason: RUNNING
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2024-12-09 03:29:21,794 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:29:27,058 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:29:35,321 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:29:42,580 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:29:48,839 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:29:57,096 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:30:03,354 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:30:12,610 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:30:21,873 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:30:32,301 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:30:40,559 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:30:46,816 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:30:56,078 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:31:06,341 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:31:13,605 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:31:18,866 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:31:28,127 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:31:37,387 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:31:45,645 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:31:54,908 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:32:04,169 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:32:13,017 Sleeping for 6s. Reason: PENDING
2024-12-09 03:32:19,275 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:32:28,536 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:32:33,793 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:32:40,052 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:32:48,314 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:32:56,576 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:33:06,842 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:33:14,097 Sleeping for 6s. Reason: RUNNING
2024-12-09 03:33:20,349 Sleeping for 7s. Reason: RUNNING
2024-12-09 03:33:27,610 Sleeping for 9s. Reason: RUNNING
2024-12-09 03:33:36,875 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:33:47,135 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:33:58,622 Setting max_seq=508, max_extra_seq=2048
2024-12-09 03:36:34,515 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.8 pTM=0.335 ipTM=0.129
2024-12-09 03:36:46,306 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.3 pTM=0.327 ipTM=0.157 tol=10.7
2024-12-09 03:36:58,131 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.8 pTM=0.322 ipTM=0.141 tol=4.25
2024-12-09 03:37:09,978 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.7 pTM=0.32 ipTM=0.141 tol=5.07
2024-12-09 03:37:21,848 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.1 pTM=0.319 ipTM=0.133 tol=5.19
2024-12-09 03:37:33,714 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60 pTM=0.32 ipTM=0.136 tol=6.81
2024-12-09 03:37:45,602 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.2 pTM=0.32 ipTM=0.134 tol=3.52
2024-12-09 03:37:57,488 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.8 pTM=0.319 ipTM=0.134 tol=3.01
2024-12-09 03:38:09,376 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.4 pTM=0.318 ipTM=0.128 tol=7.42
2024-12-09 03:38:21,261 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.2 pTM=0.32 ipTM=0.125 tol=4.51
2024-12-09 03:38:33,165 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.2 pTM=0.319 ipTM=0.133 tol=7.24
2024-12-09 03:38:45,076 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.6 pTM=0.318 ipTM=0.132 tol=4.4
2024-12-09 03:38:57,003 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.32 ipTM=0.127 tol=4.14
2024-12-09 03:39:08,921 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.5 pTM=0.32 ipTM=0.127 tol=4.11
2024-12-09 03:39:20,845 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.8 pTM=0.32 ipTM=0.131 tol=3.04
2024-12-09 03:39:32,761 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.3 pTM=0.321 ipTM=0.132 tol=2.85
2024-12-09 03:39:44,690 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.7 pTM=0.321 ipTM=0.133 tol=2.22
2024-12-09 03:39:56,632 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.6 pTM=0.321 ipTM=0.134 tol=2.79
2024-12-09 03:40:08,564 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.3 pTM=0.32 ipTM=0.131 tol=4.24
2024-12-09 03:40:20,501 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.6 pTM=0.322 ipTM=0.129 tol=6.15
2024-12-09 03:40:32,441 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.2 pTM=0.323 ipTM=0.133 tol=4.44
2024-12-09 03:40:44,353 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.5 pTM=0.322 ipTM=0.126 tol=3.87
2024-12-09 03:40:56,271 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.1 pTM=0.322 ipTM=0.136 tol=13.2
2024-12-09 03:41:08,191 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.6 pTM=0.32 ipTM=0.148 tol=3.65
2024-12-09 03:41:20,127 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.5 pTM=0.321 ipTM=0.135 tol=10.2
2024-12-09 03:41:32,090 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.3 pTM=0.319 ipTM=0.128 tol=3.24
2024-12-09 03:41:44,035 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.4 pTM=0.323 ipTM=0.131 tol=3.5
2024-12-09 03:41:55,974 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.3 pTM=0.324 ipTM=0.128 tol=3.97
2024-12-09 03:42:07,919 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.1 pTM=0.32 ipTM=0.131 tol=6.77
2024-12-09 03:42:19,859 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.6 pTM=0.322 ipTM=0.136 tol=4.65
2024-12-09 03:42:31,798 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.2 pTM=0.321 ipTM=0.132 tol=3.49
2024-12-09 03:42:31,799 alphafold2_multimer_v3_model_1_seed_000 took 508.3s (30 recycles)
2024-12-09 03:42:44,064 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.9 pTM=0.344 ipTM=0.158
2024-12-09 03:42:55,968 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.2 pTM=0.327 ipTM=0.142 tol=11.9
2024-12-09 03:43:07,892 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.4 pTM=0.33 ipTM=0.146 tol=11.2
2024-12-09 03:43:19,818 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.4 pTM=0.319 ipTM=0.127 tol=7.3
2024-12-09 03:43:31,759 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.6 pTM=0.328 ipTM=0.133 tol=7
2024-12-09 03:43:43,682 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.6 pTM=0.324 ipTM=0.139 tol=6.13
2024-12-09 03:43:55,599 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60 pTM=0.322 ipTM=0.139 tol=5.19
2024-12-09 03:44:07,529 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.9 pTM=0.321 ipTM=0.141 tol=3.04
2024-12-09 03:44:19,466 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.2 pTM=0.321 ipTM=0.14 tol=1.84
2024-12-09 03:44:31,401 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.7 pTM=0.324 ipTM=0.138 tol=2.68
2024-12-09 03:44:43,325 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.4 pTM=0.322 ipTM=0.155 tol=3.31
2024-12-09 03:44:55,249 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.9 pTM=0.319 ipTM=0.158 tol=5.91
2024-12-09 03:45:07,184 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.318 ipTM=0.152 tol=5.02
2024-12-09 03:45:19,112 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.1 pTM=0.328 ipTM=0.163 tol=5.56
2024-12-09 03:45:31,011 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.9 pTM=0.362 ipTM=0.152 tol=6.35
2024-12-09 03:45:42,950 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.3 pTM=0.38 ipTM=0.151 tol=2.84
2024-12-09 03:45:54,854 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.4 pTM=0.391 ipTM=0.158 tol=4.04
2024-12-09 03:46:06,752 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.8 pTM=0.396 ipTM=0.166 tol=3.46
2024-12-09 03:46:18,668 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.8 pTM=0.396 ipTM=0.161 tol=2.92
2024-12-09 03:46:30,563 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.8 pTM=0.394 ipTM=0.171 tol=4.26
2024-12-09 03:46:42,478 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.1 pTM=0.404 ipTM=0.169 tol=3.58
2024-12-09 03:46:54,373 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62 pTM=0.405 ipTM=0.164 tol=3.04
2024-12-09 03:47:06,280 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62 pTM=0.407 ipTM=0.159 tol=3.74
2024-12-09 03:47:18,168 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62 pTM=0.407 ipTM=0.159 tol=2.23
2024-12-09 03:47:30,072 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.9 pTM=0.41 ipTM=0.164 tol=1.92
2024-12-09 03:47:41,978 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.6 pTM=0.411 ipTM=0.158 tol=2.85
2024-12-09 03:47:53,874 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.6 pTM=0.401 ipTM=0.161 tol=4.98
2024-12-09 03:48:05,775 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.6 pTM=0.406 ipTM=0.16 tol=2.82
2024-12-09 03:48:17,679 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.8 pTM=0.409 ipTM=0.16 tol=1.65
2024-12-09 03:48:29,560 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.8 pTM=0.407 ipTM=0.159 tol=1.65
2024-12-09 03:48:41,464 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.407 ipTM=0.16 tol=1.15
2024-12-09 03:48:41,465 alphafold2_multimer_v3_model_2_seed_000 took 369.3s (30 recycles)
2024-12-09 03:48:53,772 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.6 pTM=0.322 ipTM=0.159
2024-12-09 03:49:05,713 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.1 pTM=0.319 ipTM=0.26 tol=15
2024-12-09 03:49:17,663 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.7 pTM=0.316 ipTM=0.168 tol=8.24
2024-12-09 03:49:29,605 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.323 ipTM=0.161 tol=6.12
2024-12-09 03:49:41,540 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.9 pTM=0.327 ipTM=0.164 tol=3.3
2024-12-09 03:49:53,447 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.8 pTM=0.348 ipTM=0.154 tol=4.52
2024-12-09 03:50:05,354 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.3 pTM=0.378 ipTM=0.154 tol=2.82
2024-12-09 03:50:17,266 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.3 pTM=0.383 ipTM=0.154 tol=1.18
2024-12-09 03:50:29,183 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.6 pTM=0.39 ipTM=0.158 tol=1.07
2024-12-09 03:50:41,107 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.4 pTM=0.391 ipTM=0.155 tol=2.74
2024-12-09 03:50:53,005 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.7 pTM=0.39 ipTM=0.157 tol=1.88
2024-12-09 03:51:04,934 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.7 pTM=0.396 ipTM=0.156 tol=1.61
2024-12-09 03:51:16,847 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.8 pTM=0.401 ipTM=0.154 tol=3.84
2024-12-09 03:51:28,764 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.8 pTM=0.401 ipTM=0.143 tol=3.04
2024-12-09 03:51:40,686 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61 pTM=0.407 ipTM=0.147 tol=2.48
2024-12-09 03:51:52,612 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.7 pTM=0.399 ipTM=0.141 tol=2.19
2024-12-09 03:52:04,539 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.9 pTM=0.402 ipTM=0.143 tol=2.05
2024-12-09 03:52:16,444 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.1 pTM=0.407 ipTM=0.142 tol=1.86
2024-12-09 03:52:28,345 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.2 pTM=0.405 ipTM=0.16 tol=2.42
2024-12-09 03:52:40,246 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.8 pTM=0.397 ipTM=0.156 tol=3.32
2024-12-09 03:52:52,149 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.5 pTM=0.405 ipTM=0.181 tol=1.8
2024-12-09 03:53:04,059 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.1 pTM=0.405 ipTM=0.209 tol=2.44
2024-12-09 03:53:15,977 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.2 pTM=0.408 ipTM=0.169 tol=3.93
2024-12-09 03:53:27,885 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.3 pTM=0.41 ipTM=0.186 tol=1.9
2024-12-09 03:53:39,807 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.1 pTM=0.407 ipTM=0.196 tol=1.52
2024-12-09 03:53:51,723 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.1 pTM=0.404 ipTM=0.19 tol=1.37
2024-12-09 03:54:03,613 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.8 pTM=0.397 ipTM=0.208 tol=3.35
2024-12-09 03:54:15,516 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.7 pTM=0.398 ipTM=0.212 tol=2.23
2024-12-09 03:54:27,426 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.1 pTM=0.405 ipTM=0.185 tol=1.61
2024-12-09 03:54:39,330 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.8 pTM=0.404 ipTM=0.197 tol=1.26
2024-12-09 03:54:51,242 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.9 pTM=0.4 ipTM=0.192 tol=1.79
2024-12-09 03:54:51,243 alphafold2_multimer_v3_model_3_seed_000 took 369.4s (30 recycles)
2024-12-09 03:55:03,550 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.2 pTM=0.315 ipTM=0.172
2024-12-09 03:55:15,485 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.5 pTM=0.32 ipTM=0.168 tol=10.3
2024-12-09 03:55:27,414 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.1 pTM=0.311 ipTM=0.169 tol=7.23
2024-12-09 03:55:39,341 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.5 pTM=0.309 ipTM=0.168 tol=12.8
2024-12-09 03:55:51,257 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.3 pTM=0.308 ipTM=0.175 tol=5.78
2024-12-09 03:56:03,164 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.3 pTM=0.311 ipTM=0.182 tol=4.9
2024-12-09 03:56:15,071 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.6 pTM=0.311 ipTM=0.165 tol=6.02
2024-12-09 03:56:26,993 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.1 pTM=0.31 ipTM=0.173 tol=4.21
2024-12-09 03:56:38,898 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57 pTM=0.309 ipTM=0.183 tol=3.27
2024-12-09 03:56:50,818 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.2 pTM=0.311 ipTM=0.188 tol=6.06
2024-12-09 03:57:02,734 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.9 pTM=0.313 ipTM=0.19 tol=2.94
2024-12-09 03:57:14,638 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.5 pTM=0.316 ipTM=0.2 tol=4.52
2024-12-09 03:57:26,544 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58 pTM=0.317 ipTM=0.196 tol=2.43
2024-12-09 03:57:38,452 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.9 pTM=0.315 ipTM=0.193 tol=4.83
2024-12-09 03:57:50,358 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.2 pTM=0.317 ipTM=0.203 tol=3.67
2024-12-09 03:58:02,249 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.8 pTM=0.313 ipTM=0.194 tol=1.3
2024-12-09 03:58:14,155 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.2 pTM=0.316 ipTM=0.193 tol=2.08
2024-12-09 03:58:26,053 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.3 pTM=0.317 ipTM=0.189 tol=2.16
2024-12-09 03:58:37,941 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.8 pTM=0.33 ipTM=0.198 tol=2.58
2024-12-09 03:58:49,821 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.2 pTM=0.349 ipTM=0.201 tol=5.27
2024-12-09 03:59:01,704 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.9 pTM=0.373 ipTM=0.193 tol=4.36
2024-12-09 03:59:13,570 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.2 pTM=0.386 ipTM=0.192 tol=2.3
2024-12-09 03:59:25,452 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.5 pTM=0.397 ipTM=0.198 tol=4.17
2024-12-09 03:59:37,334 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.2 pTM=0.401 ipTM=0.196 tol=3.36
2024-12-09 03:59:49,222 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.3 pTM=0.402 ipTM=0.193 tol=2.36
2024-12-09 04:00:01,121 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.4 pTM=0.401 ipTM=0.195 tol=2.77
2024-12-09 04:00:13,010 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.1 pTM=0.392 ipTM=0.199 tol=4.62
2024-12-09 04:00:24,906 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.9 pTM=0.395 ipTM=0.198 tol=3.24
2024-12-09 04:00:36,799 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.6 pTM=0.402 ipTM=0.194 tol=4.02
2024-12-09 04:00:48,676 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.2 pTM=0.403 ipTM=0.201 tol=3.81
2024-12-09 04:01:00,582 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.6 pTM=0.403 ipTM=0.201 tol=3.52
2024-12-09 04:01:00,583 alphafold2_multimer_v3_model_4_seed_000 took 369.0s (30 recycles)
2024-12-09 04:01:12,889 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.4 pTM=0.323 ipTM=0.126
2024-12-09 04:01:24,823 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.3 pTM=0.318 ipTM=0.169 tol=10
2024-12-09 04:01:36,767 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.4 pTM=0.319 ipTM=0.151 tol=7.58
2024-12-09 04:01:48,685 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.2 pTM=0.32 ipTM=0.152 tol=4.46
2024-12-09 04:02:00,619 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.1 pTM=0.317 ipTM=0.143 tol=6.25
2024-12-09 04:02:12,556 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.1 pTM=0.32 ipTM=0.152 tol=3.87
2024-12-09 04:02:24,475 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58 pTM=0.323 ipTM=0.156 tol=2.29
2024-12-09 04:02:36,409 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.2 pTM=0.325 ipTM=0.152 tol=2.31
2024-12-09 04:02:48,341 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.2 pTM=0.323 ipTM=0.155 tol=1.3
2024-12-09 04:03:00,281 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.9 pTM=0.323 ipTM=0.158 tol=2.43
2024-12-09 04:03:12,207 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.3 pTM=0.323 ipTM=0.145 tol=2.64
2024-12-09 04:03:24,137 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.9 pTM=0.328 ipTM=0.15 tol=2.47
2024-12-09 04:03:36,084 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58 pTM=0.331 ipTM=0.151 tol=2.1
2024-12-09 04:03:48,006 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58 pTM=0.332 ipTM=0.147 tol=2.88
2024-12-09 04:03:59,950 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.6 pTM=0.327 ipTM=0.146 tol=2.61
2024-12-09 04:04:11,894 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.9 pTM=0.327 ipTM=0.15 tol=2.46
2024-12-09 04:04:23,821 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.1 pTM=0.329 ipTM=0.143 tol=3.45
2024-12-09 04:04:35,755 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.1 pTM=0.33 ipTM=0.145 tol=2.04
2024-12-09 04:04:47,675 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.1 pTM=0.33 ipTM=0.143 tol=2.99
2024-12-09 04:04:59,582 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58 pTM=0.333 ipTM=0.14 tol=2.46
2024-12-09 04:05:11,502 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.3 pTM=0.333 ipTM=0.139 tol=1.72
2024-12-09 04:05:23,412 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.4 pTM=0.336 ipTM=0.138 tol=1.12
2024-12-09 04:05:35,335 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.6 pTM=0.341 ipTM=0.135 tol=1.4
2024-12-09 04:05:47,248 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.7 pTM=0.342 ipTM=0.143 tol=1.99
2024-12-09 04:05:59,146 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.3 pTM=0.344 ipTM=0.136 tol=1.68
2024-12-09 04:06:11,048 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.2 pTM=0.345 ipTM=0.13 tol=1.89
2024-12-09 04:06:22,957 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.9 pTM=0.343 ipTM=0.143 tol=2.88
2024-12-09 04:06:34,873 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.2 pTM=0.347 ipTM=0.128 tol=2.03
2024-12-09 04:06:46,789 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.7 pTM=0.347 ipTM=0.13 tol=1.36
2024-12-09 04:06:58,709 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.3 pTM=0.344 ipTM=0.132 tol=1.3
2024-12-09 04:07:10,627 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.3 pTM=0.34 ipTM=0.134 tol=0.946
2024-12-09 04:07:10,628 alphafold2_multimer_v3_model_5_seed_000 took 369.7s (30 recycles)
2024-12-09 04:07:11,002 reranking models by 'multimer' metric
2024-12-09 04:07:13,292 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 04:08:01,555 Relaxation took 50.6s
2024-12-09 04:08:01,555 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.6 pTM=0.403 ipTM=0.201
2024-12-09 04:08:52,333 Relaxation took 50.8s
2024-12-09 04:08:52,334 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.9 pTM=0.4 ipTM=0.192
2024-12-09 04:09:46,799 Relaxation took 54.5s
2024-12-09 04:09:46,799 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.407 ipTM=0.16
2024-12-09 04:10:09,325 Relaxation took 22.5s
2024-12-09 04:10:09,325 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.3 pTM=0.34 ipTM=0.134
2024-12-09 04:10:43,608 Relaxation took 34.3s
2024-12-09 04:10:43,608 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.2 pTM=0.321 ipTM=0.132
2024-12-09 04:10:44,968 Done