2024-12-09 03:56:46,582 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 03:56:46,883 Running on GPU
2024-12-09 03:56:48,913 Found 6 citations for tools or databases
2024-12-09 03:56:48,913 Query 1/1: TRIM4_LTBR (length 935)
2024-12-09 03:56:49,187 Sleeping for 7s. Reason: PENDING
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2024-12-09 03:59:29,663 Sleeping for 5s. Reason: RUNNING
2024-12-09 03:59:34,915 Sleeping for 8s. Reason: RUNNING
2024-12-09 03:59:43,184 Sleeping for 10s. Reason: RUNNING
2024-12-09 03:59:53,447 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:00:00,702 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:00:06,965 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:00:14,227 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:00:19,483 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:00:29,738 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:00:37,403 Sleeping for 9s. Reason: PENDING
2024-12-09 04:00:46,672 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:00:52,929 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:01:02,186 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:01:12,447 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:01:21,701 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:01:27,967 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:01:38,228 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:01:43,487 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:01:49,743 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:01:55,002 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:02:05,263 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:02:12,520 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:02:24,047 Setting max_seq=508, max_extra_seq=2048
2024-12-09 04:05:21,443 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.7 pTM=0.334 ipTM=0.137
2024-12-09 04:05:41,411 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.8 pTM=0.361 ipTM=0.131 tol=18.1
2024-12-09 04:06:01,464 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62 pTM=0.361 ipTM=0.138 tol=12.6
2024-12-09 04:06:21,579 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.353 ipTM=0.133 tol=12.3
2024-12-09 04:06:41,727 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.3 pTM=0.352 ipTM=0.138 tol=6.2
2024-12-09 04:07:01,886 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.2 pTM=0.35 ipTM=0.137 tol=4.21
2024-12-09 04:07:22,070 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62 pTM=0.349 ipTM=0.138 tol=4.5
2024-12-09 04:07:42,287 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.2 pTM=0.345 ipTM=0.134 tol=4.39
2024-12-09 04:08:02,529 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.2 pTM=0.347 ipTM=0.133 tol=4.65
2024-12-09 04:08:22,804 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.2 pTM=0.348 ipTM=0.13 tol=8.81
2024-12-09 04:08:43,073 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.3 pTM=0.354 ipTM=0.131 tol=5.71
2024-12-09 04:09:03,358 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.5 pTM=0.352 ipTM=0.131 tol=1.94
2024-12-09 04:09:23,625 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.5 pTM=0.351 ipTM=0.133 tol=2.66
2024-12-09 04:09:43,910 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.7 pTM=0.351 ipTM=0.133 tol=3.93
2024-12-09 04:10:04,198 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.3 pTM=0.35 ipTM=0.133 tol=3.82
2024-12-09 04:10:24,532 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.4 pTM=0.352 ipTM=0.131 tol=3.27
2024-12-09 04:10:44,833 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.5 pTM=0.351 ipTM=0.131 tol=4.02
2024-12-09 04:11:05,154 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.6 pTM=0.352 ipTM=0.13 tol=5.63
2024-12-09 04:11:25,450 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.2 pTM=0.352 ipTM=0.131 tol=3.6
2024-12-09 04:11:45,769 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.8 pTM=0.351 ipTM=0.133 tol=10.7
2024-12-09 04:12:06,077 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.5 pTM=0.355 ipTM=0.131 tol=7.95
2024-12-09 04:12:26,401 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.4 pTM=0.354 ipTM=0.132 tol=3.97
2024-12-09 04:12:46,721 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.4 pTM=0.353 ipTM=0.133 tol=4.14
2024-12-09 04:13:07,058 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.4 pTM=0.353 ipTM=0.132 tol=4.79
2024-12-09 04:13:27,359 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.4 pTM=0.354 ipTM=0.132 tol=4.65
2024-12-09 04:13:47,661 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.1 pTM=0.35 ipTM=0.133 tol=3.86
2024-12-09 04:14:08,003 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.2 pTM=0.351 ipTM=0.133 tol=4.35
2024-12-09 04:14:28,336 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.2 pTM=0.35 ipTM=0.135 tol=4.85
2024-12-09 04:14:48,662 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.4 pTM=0.352 ipTM=0.134 tol=5.23
2024-12-09 04:15:08,972 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.2 pTM=0.352 ipTM=0.134 tol=3.47
2024-12-09 04:15:29,286 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.9 pTM=0.353 ipTM=0.136 tol=5.2
2024-12-09 04:15:29,287 alphafold2_multimer_v3_model_1_seed_000 took 780.4s (30 recycles)
2024-12-09 04:15:50,111 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.2 pTM=0.354 ipTM=0.149
2024-12-09 04:16:10,418 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.2 pTM=0.375 ipTM=0.144 tol=20.7
2024-12-09 04:16:30,714 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.8 pTM=0.375 ipTM=0.149 tol=8.7
2024-12-09 04:16:51,008 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.4 pTM=0.372 ipTM=0.157 tol=10.1
2024-12-09 04:17:11,334 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.4 pTM=0.373 ipTM=0.151 tol=6.65
2024-12-09 04:17:31,659 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.5 pTM=0.375 ipTM=0.144 tol=6.8
2024-12-09 04:17:52,010 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.7 pTM=0.374 ipTM=0.141 tol=4.76
2024-12-09 04:18:12,315 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.8 pTM=0.374 ipTM=0.141 tol=5.5
2024-12-09 04:18:32,639 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62 pTM=0.375 ipTM=0.14 tol=6
2024-12-09 04:18:52,960 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.5 pTM=0.375 ipTM=0.141 tol=9.97
2024-12-09 04:19:13,279 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.3 pTM=0.376 ipTM=0.142 tol=4.36
2024-12-09 04:19:33,584 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.5 pTM=0.375 ipTM=0.141 tol=6.29
2024-12-09 04:19:53,879 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.5 pTM=0.375 ipTM=0.142 tol=3.12
2024-12-09 04:20:14,160 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.8 pTM=0.373 ipTM=0.14 tol=4.12
2024-12-09 04:20:34,426 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.8 pTM=0.373 ipTM=0.139 tol=6.37
2024-12-09 04:20:54,695 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.6 pTM=0.373 ipTM=0.138 tol=5.63
2024-12-09 04:21:14,988 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.1 pTM=0.374 ipTM=0.135 tol=6.22
2024-12-09 04:21:35,274 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.8 pTM=0.372 ipTM=0.138 tol=6.29
2024-12-09 04:21:55,606 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.5 pTM=0.374 ipTM=0.137 tol=11.2
2024-12-09 04:22:15,941 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.6 pTM=0.378 ipTM=0.14 tol=10.5
2024-12-09 04:22:36,282 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.5 pTM=0.38 ipTM=0.139 tol=14.9
2024-12-09 04:22:56,600 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.8 pTM=0.375 ipTM=0.143 tol=6.23
2024-12-09 04:23:16,947 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.3 pTM=0.374 ipTM=0.141 tol=8.73
2024-12-09 04:23:37,305 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.3 pTM=0.376 ipTM=0.14 tol=7.79
2024-12-09 04:23:57,648 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.3 pTM=0.376 ipTM=0.139 tol=6.2
2024-12-09 04:24:17,993 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.9 pTM=0.375 ipTM=0.139 tol=5.87
2024-12-09 04:24:38,349 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.9 pTM=0.375 ipTM=0.138 tol=9.87
2024-12-09 04:24:58,702 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.2 pTM=0.376 ipTM=0.141 tol=5.6
2024-12-09 04:25:19,050 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.1 pTM=0.376 ipTM=0.142 tol=5.13
2024-12-09 04:25:39,410 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.8 pTM=0.377 ipTM=0.144 tol=5.65
2024-12-09 04:25:59,788 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.375 ipTM=0.141 tol=10.1
2024-12-09 04:25:59,789 alphafold2_multimer_v3_model_2_seed_000 took 630.0s (30 recycles)
2024-12-09 04:26:20,720 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.7 pTM=0.318 ipTM=0.151
2024-12-09 04:26:41,115 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.7 pTM=0.36 ipTM=0.141 tol=25.2
2024-12-09 04:27:01,474 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.5 pTM=0.366 ipTM=0.14 tol=9.18
2024-12-09 04:27:21,822 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.9 pTM=0.365 ipTM=0.142 tol=13.1
2024-12-09 04:27:42,177 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.2 pTM=0.368 ipTM=0.14 tol=8.7
2024-12-09 04:28:02,515 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.7 pTM=0.369 ipTM=0.137 tol=6.12
2024-12-09 04:28:22,850 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.1 pTM=0.372 ipTM=0.134 tol=7.45
2024-12-09 04:28:43,197 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.3 pTM=0.372 ipTM=0.133 tol=5.18
2024-12-09 04:29:03,536 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.4 pTM=0.373 ipTM=0.133 tol=6.86
2024-12-09 04:29:23,888 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.4 pTM=0.374 ipTM=0.131 tol=6.39
2024-12-09 04:29:44,238 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.4 pTM=0.376 ipTM=0.133 tol=4.25
2024-12-09 04:30:04,584 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.3 pTM=0.374 ipTM=0.131 tol=4.48
2024-12-09 04:30:24,927 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.2 pTM=0.375 ipTM=0.132 tol=3.84
2024-12-09 04:30:45,263 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.4 pTM=0.375 ipTM=0.133 tol=2.48
2024-12-09 04:31:05,598 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.2 pTM=0.375 ipTM=0.133 tol=3.18
2024-12-09 04:31:25,951 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.1 pTM=0.375 ipTM=0.131 tol=3.09
2024-12-09 04:31:46,284 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.2 pTM=0.375 ipTM=0.131 tol=3.65
2024-12-09 04:32:06,645 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.2 pTM=0.375 ipTM=0.131 tol=2.85
2024-12-09 04:32:26,991 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.8 pTM=0.376 ipTM=0.129 tol=6.66
2024-12-09 04:32:47,331 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.8 pTM=0.374 ipTM=0.13 tol=6.46
2024-12-09 04:33:07,663 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59 pTM=0.374 ipTM=0.13 tol=2.23
2024-12-09 04:33:28,002 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.9 pTM=0.374 ipTM=0.13 tol=2.09
2024-12-09 04:33:48,356 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.6 pTM=0.374 ipTM=0.129 tol=2.32
2024-12-09 04:34:08,704 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.9 pTM=0.375 ipTM=0.129 tol=2.08
2024-12-09 04:34:29,049 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59 pTM=0.375 ipTM=0.128 tol=2.87
2024-12-09 04:34:49,390 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59 pTM=0.374 ipTM=0.129 tol=3.62
2024-12-09 04:35:09,733 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.9 pTM=0.374 ipTM=0.129 tol=2.24
2024-12-09 04:35:30,066 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.9 pTM=0.374 ipTM=0.13 tol=2.59
2024-12-09 04:35:50,402 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.1 pTM=0.374 ipTM=0.13 tol=4.36
2024-12-09 04:36:10,743 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.1 pTM=0.375 ipTM=0.133 tol=4.54
2024-12-09 04:36:31,081 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.1 pTM=0.375 ipTM=0.13 tol=3.03
2024-12-09 04:36:31,082 alphafold2_multimer_v3_model_3_seed_000 took 630.7s (30 recycles)
2024-12-09 04:36:51,944 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53 pTM=0.312 ipTM=0.196
2024-12-09 04:37:12,312 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56 pTM=0.339 ipTM=0.144 tol=27.9
2024-12-09 04:37:32,714 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.8 pTM=0.345 ipTM=0.146 tol=23.3
2024-12-09 04:37:53,160 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.4 pTM=0.345 ipTM=0.145 tol=12
2024-12-09 04:38:13,611 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.1 pTM=0.351 ipTM=0.147 tol=16.6
2024-12-09 04:38:34,060 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58 pTM=0.35 ipTM=0.149 tol=16.3
2024-12-09 04:38:54,486 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.4 pTM=0.357 ipTM=0.159 tol=8.33
2024-12-09 04:39:14,945 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.5 pTM=0.351 ipTM=0.14 tol=6.94
2024-12-09 04:39:35,387 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.7 pTM=0.349 ipTM=0.139 tol=11.3
2024-12-09 04:39:55,825 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.2 pTM=0.345 ipTM=0.149 tol=9.28
2024-12-09 04:40:16,244 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.3 pTM=0.36 ipTM=0.16 tol=10.9
2024-12-09 04:40:36,695 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.8 pTM=0.359 ipTM=0.146 tol=8.49
2024-12-09 04:40:57,133 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.7 pTM=0.36 ipTM=0.151 tol=4.77
2024-12-09 04:41:17,560 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.2 pTM=0.354 ipTM=0.147 tol=5.34
2024-12-09 04:41:38,003 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.3 pTM=0.353 ipTM=0.146 tol=4.18
2024-12-09 04:41:58,428 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.3 pTM=0.355 ipTM=0.146 tol=3.64
2024-12-09 04:42:18,863 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.3 pTM=0.354 ipTM=0.147 tol=4.87
2024-12-09 04:42:39,280 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.1 pTM=0.352 ipTM=0.139 tol=9.29
2024-12-09 04:42:59,705 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58 pTM=0.35 ipTM=0.137 tol=5.48
2024-12-09 04:43:20,117 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.2 pTM=0.35 ipTM=0.139 tol=5.54
2024-12-09 04:43:40,523 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.2 pTM=0.353 ipTM=0.138 tol=4.49
2024-12-09 04:44:00,969 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.2 pTM=0.347 ipTM=0.138 tol=15.8
2024-12-09 04:44:21,401 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.3 pTM=0.35 ipTM=0.138 tol=10.8
2024-12-09 04:44:41,801 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.2 pTM=0.354 ipTM=0.139 tol=10.3
2024-12-09 04:45:02,214 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.2 pTM=0.353 ipTM=0.139 tol=9.27
2024-12-09 04:45:22,603 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.7 pTM=0.35 ipTM=0.139 tol=10.2
2024-12-09 04:45:43,037 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.4 pTM=0.345 ipTM=0.148 tol=11.2
2024-12-09 04:46:03,470 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.5 pTM=0.35 ipTM=0.154 tol=18.8
2024-12-09 04:46:23,889 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.6 pTM=0.354 ipTM=0.15 tol=9.02
2024-12-09 04:46:44,317 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.2 pTM=0.359 ipTM=0.152 tol=7.28
2024-12-09 04:47:04,713 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.2 pTM=0.356 ipTM=0.14 tol=10.5
2024-12-09 04:47:04,714 alphafold2_multimer_v3_model_4_seed_000 took 633.1s (30 recycles)
2024-12-09 04:47:25,594 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.7 pTM=0.347 ipTM=0.282
2024-12-09 04:47:45,982 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.7 pTM=0.363 ipTM=0.15 tol=14.9
2024-12-09 04:48:06,388 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.2 pTM=0.364 ipTM=0.161 tol=13.1
2024-12-09 04:48:26,797 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.1 pTM=0.363 ipTM=0.161 tol=12.1
2024-12-09 04:48:47,198 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.8 pTM=0.365 ipTM=0.156 tol=5.15
2024-12-09 04:49:07,601 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58 pTM=0.362 ipTM=0.153 tol=4.7
2024-12-09 04:49:27,994 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.1 pTM=0.365 ipTM=0.156 tol=3.23
2024-12-09 04:49:48,409 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.8 pTM=0.365 ipTM=0.157 tol=4.06
2024-12-09 04:50:08,802 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.8 pTM=0.364 ipTM=0.156 tol=6.28
2024-12-09 04:50:29,204 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.4 pTM=0.366 ipTM=0.159 tol=5.34
2024-12-09 04:50:49,569 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.8 pTM=0.366 ipTM=0.16 tol=7.2
2024-12-09 04:51:09,938 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.8 pTM=0.367 ipTM=0.16 tol=5.8
2024-12-09 04:51:30,315 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.6 pTM=0.367 ipTM=0.163 tol=6.83
2024-12-09 04:51:50,682 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.7 pTM=0.367 ipTM=0.163 tol=4.82
2024-12-09 04:52:11,047 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.6 pTM=0.366 ipTM=0.163 tol=8.49
2024-12-09 04:52:31,398 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.8 pTM=0.367 ipTM=0.162 tol=5.62
2024-12-09 04:52:51,759 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.2 pTM=0.365 ipTM=0.159 tol=7.04
2024-12-09 04:53:12,129 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.2 pTM=0.365 ipTM=0.157 tol=4.57
2024-12-09 04:53:32,513 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58 pTM=0.363 ipTM=0.156 tol=5.77
2024-12-09 04:53:52,918 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.9 pTM=0.363 ipTM=0.157 tol=7.65
2024-12-09 04:54:13,330 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.6 pTM=0.365 ipTM=0.151 tol=8.9
2024-12-09 04:54:33,744 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.2 pTM=0.365 ipTM=0.149 tol=5.7
2024-12-09 04:54:54,164 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.3 pTM=0.367 ipTM=0.146 tol=5.33
2024-12-09 04:55:14,578 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.4 pTM=0.368 ipTM=0.144 tol=5.03
2024-12-09 04:55:35,013 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.8 pTM=0.37 ipTM=0.143 tol=5.28
2024-12-09 04:55:55,434 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.1 pTM=0.367 ipTM=0.146 tol=6.75
2024-12-09 04:56:15,859 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.5 pTM=0.37 ipTM=0.144 tol=3.66
2024-12-09 04:56:36,272 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.5 pTM=0.372 ipTM=0.146 tol=3.36
2024-12-09 04:56:56,710 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.8 pTM=0.372 ipTM=0.146 tol=5.11
2024-12-09 04:57:17,124 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.4 pTM=0.373 ipTM=0.144 tol=5.06
2024-12-09 04:57:37,539 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.5 pTM=0.374 ipTM=0.145 tol=4.54
2024-12-09 04:57:37,540 alphafold2_multimer_v3_model_5_seed_000 took 632.3s (30 recycles)
2024-12-09 04:57:38,084 reranking models by 'multimer' metric
2024-12-09 04:57:41,428 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 04:59:16,459 Relaxation took 98.4s
2024-12-09 04:59:16,459 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.5 pTM=0.374 ipTM=0.145
2024-12-09 05:00:55,436 Relaxation took 99.0s
2024-12-09 05:00:55,436 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.375 ipTM=0.141
2024-12-09 05:02:27,076 Relaxation took 91.6s
2024-12-09 05:02:27,076 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.2 pTM=0.356 ipTM=0.14
2024-12-09 05:03:32,685 Relaxation took 65.6s
2024-12-09 05:03:32,685 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.9 pTM=0.353 ipTM=0.136
2024-12-09 05:04:56,607 Relaxation took 83.9s
2024-12-09 05:04:56,608 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.1 pTM=0.375 ipTM=0.13
2024-12-09 05:04:58,569 Done