2024-12-09 04:11:14,771 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 04:11:15,083 Running on GPU
2024-12-09 04:11:18,419 Found 6 citations for tools or databases
2024-12-09 04:11:18,419 Query 1/1: TRIM4_RAB39B (length 713)
2024-12-09 04:11:18,696 Sleeping for 6s. Reason: PENDING
2024-12-09 04:11:24,956 Sleeping for 6s. Reason: PENDING
2024-12-09 04:11:31,212 Sleeping for 10s. Reason: PENDING
2024-12-09 04:11:41,474 Sleeping for 10s. Reason: PENDING
2024-12-09 04:11:51,730 Sleeping for 6s. Reason: PENDING
2024-12-09 04:11:57,990 Sleeping for 6s. Reason: PENDING
2024-12-09 04:12:04,245 Sleeping for 8s. Reason: PENDING
2024-12-09 04:12:12,505 Sleeping for 9s. Reason: PENDING
2024-12-09 04:12:21,762 Sleeping for 5s. Reason: PENDING
2024-12-09 04:12:27,017 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:12:32,269 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:12:41,523 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:12:51,781 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:12:58,036 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:13:04,290 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:13:10,543 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:13:16,804 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:13:25,065 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:13:31,318 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:13:40,578 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:13:50,843 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:13:56,098 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:14:02,367 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:14:12,625 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:14:17,883 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:14:28,138 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:14:37,429 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:14:45,697 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:14:54,958 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:15:00,222 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:15:06,479 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:15:16,736 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:15:25,995 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:15:31,248 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:15:39,519 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:15:46,781 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:15:53,033 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:16:03,840 Sleeping for 9s. Reason: PENDING
2024-12-09 04:16:13,095 Sleeping for 6s. Reason: PENDING
2024-12-09 04:16:19,350 Sleeping for 6s. Reason: PENDING
2024-12-09 04:16:25,618 Sleeping for 7s. Reason: PENDING
2024-12-09 04:16:32,882 Sleeping for 6s. Reason: PENDING
2024-12-09 04:16:39,136 Sleeping for 8s. Reason: PENDING
2024-12-09 04:16:47,392 Sleeping for 10s. Reason: PENDING
2024-12-09 04:16:57,659 Sleeping for 6s. Reason: PENDING
2024-12-09 04:17:03,915 Sleeping for 5s. Reason: PENDING
2024-12-09 04:17:09,176 Sleeping for 10s. Reason: PENDING
2024-12-09 04:17:19,446 Sleeping for 8s. Reason: PENDING
2024-12-09 04:17:27,701 Sleeping for 7s. Reason: PENDING
2024-12-09 04:17:34,954 Sleeping for 5s. Reason: PENDING
2024-12-09 04:17:40,205 Sleeping for 8s. Reason: PENDING
2024-12-09 04:17:48,468 Sleeping for 7s. Reason: PENDING
2024-12-09 04:17:55,729 Sleeping for 8s. Reason: PENDING
2024-12-09 04:18:03,986 Sleeping for 8s. Reason: PENDING
2024-12-09 04:18:12,242 Sleeping for 10s. Reason: PENDING
2024-12-09 04:18:22,509 Sleeping for 6s. Reason: PENDING
2024-12-09 04:18:28,766 Sleeping for 7s. Reason: PENDING
2024-12-09 04:18:36,031 Sleeping for 9s. Reason: PENDING
2024-12-09 04:18:45,294 Sleeping for 6s. Reason: PENDING
2024-12-09 04:18:51,548 Sleeping for 7s. Reason: PENDING
2024-12-09 04:18:58,803 Sleeping for 6s. Reason: PENDING
2024-12-09 04:19:05,065 Sleeping for 6s. Reason: PENDING
2024-12-09 04:19:11,322 Sleeping for 8s. Reason: PENDING
2024-12-09 04:19:19,577 Sleeping for 7s. Reason: PENDING
2024-12-09 04:19:26,835 Sleeping for 9s. Reason: PENDING
2024-12-09 04:19:36,096 Sleeping for 5s. Reason: PENDING
2024-12-09 04:19:41,353 Sleeping for 8s. Reason: PENDING
2024-12-09 04:19:49,612 Sleeping for 9s. Reason: PENDING
2024-12-09 04:19:58,868 Sleeping for 10s. Reason: PENDING
2024-12-09 04:20:09,127 Sleeping for 7s. Reason: PENDING
2024-12-09 04:20:16,390 Sleeping for 6s. Reason: PENDING
2024-12-09 04:20:22,661 Sleeping for 5s. Reason: PENDING
2024-12-09 04:20:27,917 Sleeping for 10s. Reason: PENDING
2024-12-09 04:20:38,178 Sleeping for 8s. Reason: PENDING
2024-12-09 04:20:46,438 Sleeping for 5s. Reason: PENDING
2024-12-09 04:20:51,692 Sleeping for 10s. Reason: PENDING
2024-12-09 04:21:01,950 Sleeping for 10s. Reason: PENDING
2024-12-09 04:21:12,212 Sleeping for 9s. Reason: PENDING
2024-12-09 04:21:21,475 Sleeping for 8s. Reason: PENDING
2024-12-09 04:21:29,736 Sleeping for 5s. Reason: PENDING
2024-12-09 04:21:34,993 Sleeping for 10s. Reason: PENDING
2024-12-09 04:21:45,255 Sleeping for 8s. Reason: PENDING
2024-12-09 04:21:53,515 Sleeping for 10s. Reason: PENDING
2024-12-09 04:22:03,778 Sleeping for 6s. Reason: PENDING
2024-12-09 04:22:10,029 Sleeping for 5s. Reason: PENDING
2024-12-09 04:22:15,287 Sleeping for 5s. Reason: PENDING
2024-12-09 04:22:20,542 Sleeping for 9s. Reason: PENDING
2024-12-09 04:22:29,803 Sleeping for 10s. Reason: PENDING
2024-12-09 04:22:40,061 Sleeping for 10s. Reason: PENDING
2024-12-09 04:22:50,325 Sleeping for 6s. Reason: PENDING
2024-12-09 04:22:56,582 Sleeping for 9s. Reason: PENDING
2024-12-09 04:23:05,838 Sleeping for 10s. Reason: PENDING
2024-12-09 04:23:16,102 Sleeping for 6s. Reason: PENDING
2024-12-09 04:23:22,356 Sleeping for 10s. Reason: PENDING
2024-12-09 04:23:32,614 Sleeping for 8s. Reason: PENDING
2024-12-09 04:23:40,870 Sleeping for 5s. Reason: PENDING
2024-12-09 04:23:46,123 Sleeping for 5s. Reason: PENDING
2024-12-09 04:23:51,376 Sleeping for 5s. Reason: PENDING
2024-12-09 04:23:56,627 Sleeping for 8s. Reason: PENDING
2024-12-09 04:24:04,881 Sleeping for 7s. Reason: PENDING
2024-12-09 04:24:12,150 Sleeping for 8s. Reason: PENDING
2024-12-09 04:24:20,407 Sleeping for 9s. Reason: PENDING
2024-12-09 04:24:29,671 Sleeping for 7s. Reason: PENDING
2024-12-09 04:24:36,929 Sleeping for 6s. Reason: PENDING
2024-12-09 04:24:43,184 Sleeping for 6s. Reason: PENDING
2024-12-09 04:24:49,437 Sleeping for 9s. Reason: PENDING
2024-12-09 04:24:58,706 Sleeping for 8s. Reason: PENDING
2024-12-09 04:25:06,971 Sleeping for 8s. Reason: PENDING
2024-12-09 04:25:15,236 Sleeping for 10s. Reason: PENDING
2024-12-09 04:25:25,501 Sleeping for 6s. Reason: PENDING
2024-12-09 04:25:31,755 Sleeping for 10s. Reason: PENDING
2024-12-09 04:25:42,022 Sleeping for 6s. Reason: PENDING
2024-12-09 04:25:48,279 Sleeping for 8s. Reason: PENDING
2024-12-09 04:25:56,536 Sleeping for 6s. Reason: PENDING
2024-12-09 04:26:02,803 Sleeping for 8s. Reason: PENDING
2024-12-09 04:26:11,068 Sleeping for 7s. Reason: PENDING
2024-12-09 04:26:18,325 Sleeping for 5s. Reason: PENDING
2024-12-09 04:26:23,590 Sleeping for 6s. Reason: PENDING
2024-12-09 04:26:29,842 Sleeping for 5s. Reason: PENDING
2024-12-09 04:26:35,101 Sleeping for 6s. Reason: PENDING
2024-12-09 04:26:41,362 Sleeping for 10s. Reason: PENDING
2024-12-09 04:26:51,622 Sleeping for 8s. Reason: PENDING
2024-12-09 04:26:59,880 Sleeping for 10s. Reason: PENDING
2024-12-09 04:27:10,134 Sleeping for 9s. Reason: PENDING
2024-12-09 04:27:19,392 Sleeping for 7s. Reason: PENDING
2024-12-09 04:27:26,657 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:27:33,914 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:27:39,164 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:27:44,422 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:27:49,838 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:27:59,096 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:28:04,348 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:28:09,605 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:28:15,860 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:28:22,118 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:28:28,373 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:28:33,627 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:28:40,889 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:28:49,143 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:28:55,408 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:29:05,671 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:29:13,927 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:29:26,929 Setting max_seq=508, max_extra_seq=2048
2024-12-09 04:32:28,065 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.7 pTM=0.393 ipTM=0.255
2024-12-09 04:32:38,276 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.4 pTM=0.39 ipTM=0.272 tol=10.6
2024-12-09 04:32:48,502 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.7 pTM=0.385 ipTM=0.235 tol=7.14
2024-12-09 04:32:58,737 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.1 pTM=0.378 ipTM=0.251 tol=6.96
2024-12-09 04:33:08,986 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.2 pTM=0.377 ipTM=0.248 tol=6.4
2024-12-09 04:33:19,231 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.8 pTM=0.387 ipTM=0.241 tol=3.27
2024-12-09 04:33:29,488 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.8 pTM=0.39 ipTM=0.252 tol=1.11
2024-12-09 04:33:39,764 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.1 pTM=0.392 ipTM=0.197 tol=2.73
2024-12-09 04:33:50,044 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70 pTM=0.394 ipTM=0.186 tol=1.8
2024-12-09 04:34:00,334 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.4 pTM=0.399 ipTM=0.176 tol=1.66
2024-12-09 04:34:10,626 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.2 pTM=0.397 ipTM=0.182 tol=1.58
2024-12-09 04:34:20,914 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.5 pTM=0.393 ipTM=0.169 tol=1.62
2024-12-09 04:34:31,217 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.8 pTM=0.398 ipTM=0.188 tol=2.36
2024-12-09 04:34:41,521 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.1 pTM=0.397 ipTM=0.179 tol=1.98
2024-12-09 04:34:51,835 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71 pTM=0.397 ipTM=0.19 tol=1.44
2024-12-09 04:35:02,149 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71 pTM=0.393 ipTM=0.179 tol=1.5
2024-12-09 04:35:12,465 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.4 pTM=0.401 ipTM=0.192 tol=3.12
2024-12-09 04:35:22,785 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.9 pTM=0.393 ipTM=0.169 tol=1.96
2024-12-09 04:35:33,117 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.2 pTM=0.393 ipTM=0.179 tol=1.59
2024-12-09 04:35:43,449 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.9 pTM=0.391 ipTM=0.162 tol=2.31
2024-12-09 04:35:53,779 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.8 pTM=0.396 ipTM=0.183 tol=2.5
2024-12-09 04:36:04,113 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.6 pTM=0.4 ipTM=0.17 tol=1.48
2024-12-09 04:36:14,457 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.9 pTM=0.399 ipTM=0.183 tol=1.35
2024-12-09 04:36:24,794 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.8 pTM=0.399 ipTM=0.179 tol=1.88
2024-12-09 04:36:35,136 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.5 pTM=0.398 ipTM=0.187 tol=1.31
2024-12-09 04:36:45,468 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.4 pTM=0.398 ipTM=0.177 tol=1.17
2024-12-09 04:36:55,810 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.6 pTM=0.398 ipTM=0.185 tol=1.55
2024-12-09 04:37:06,149 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.1 pTM=0.396 ipTM=0.17 tol=2.15
2024-12-09 04:37:16,484 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.8 pTM=0.393 ipTM=0.182 tol=0.906
2024-12-09 04:37:26,820 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.8 pTM=0.392 ipTM=0.167 tol=1.7
2024-12-09 04:37:37,161 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.8 pTM=0.394 ipTM=0.183 tol=1.32
2024-12-09 04:37:37,162 alphafold2_multimer_v3_model_1_seed_000 took 485.1s (30 recycles)
2024-12-09 04:37:47,845 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.3 pTM=0.387 ipTM=0.247
2024-12-09 04:37:58,206 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.2 pTM=0.409 ipTM=0.291 tol=14.6
2024-12-09 04:38:08,539 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.8 pTM=0.423 ipTM=0.269 tol=8.56
2024-12-09 04:38:18,877 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.9 pTM=0.431 ipTM=0.229 tol=4.68
2024-12-09 04:38:29,212 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.4 pTM=0.436 ipTM=0.208 tol=2.05
2024-12-09 04:38:39,544 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.7 pTM=0.438 ipTM=0.182 tol=0.857
2024-12-09 04:38:49,870 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.6 pTM=0.439 ipTM=0.187 tol=1.03
2024-12-09 04:39:00,201 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.9 pTM=0.444 ipTM=0.166 tol=1.43
2024-12-09 04:39:10,533 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.8 pTM=0.447 ipTM=0.171 tol=1.43
2024-12-09 04:39:20,849 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.9 pTM=0.447 ipTM=0.17 tol=2.47
2024-12-09 04:39:31,178 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.1 pTM=0.442 ipTM=0.161 tol=2.37
2024-12-09 04:39:41,515 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.1 pTM=0.443 ipTM=0.168 tol=1.1
2024-12-09 04:39:51,853 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.1 pTM=0.441 ipTM=0.164 tol=0.734
2024-12-09 04:40:02,186 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.2 pTM=0.449 ipTM=0.177 tol=0.847
2024-12-09 04:40:12,519 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.5 pTM=0.446 ipTM=0.182 tol=1.7
2024-12-09 04:40:22,862 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.5 pTM=0.449 ipTM=0.175 tol=1.14
2024-12-09 04:40:33,194 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.9 pTM=0.444 ipTM=0.169 tol=1.47
2024-12-09 04:40:43,531 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.1 pTM=0.448 ipTM=0.178 tol=1.21
2024-12-09 04:40:53,865 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.2 pTM=0.449 ipTM=0.18 tol=0.668
2024-12-09 04:41:04,200 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.9 pTM=0.447 ipTM=0.181 tol=0.653
2024-12-09 04:41:14,544 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.6 pTM=0.447 ipTM=0.173 tol=1.13
2024-12-09 04:41:24,873 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.1 pTM=0.449 ipTM=0.182 tol=1.25
2024-12-09 04:41:35,214 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.1 pTM=0.45 ipTM=0.186 tol=1.03
2024-12-09 04:41:45,541 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.2 pTM=0.45 ipTM=0.177 tol=1.08
2024-12-09 04:41:55,873 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.9 pTM=0.452 ipTM=0.189 tol=1.09
2024-12-09 04:42:06,204 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.9 pTM=0.452 ipTM=0.187 tol=0.802
2024-12-09 04:42:16,545 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.8 pTM=0.447 ipTM=0.178 tol=1.22
2024-12-09 04:42:26,881 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.9 pTM=0.448 ipTM=0.176 tol=1.4
2024-12-09 04:42:37,218 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.8 pTM=0.45 ipTM=0.183 tol=0.85
2024-12-09 04:42:47,554 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.7 pTM=0.449 ipTM=0.183 tol=0.553
2024-12-09 04:42:57,894 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.7 pTM=0.448 ipTM=0.179 tol=0.793
2024-12-09 04:42:57,894 alphafold2_multimer_v3_model_2_seed_000 took 320.4s (30 recycles)
2024-12-09 04:43:08,568 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.8 pTM=0.378 ipTM=0.208
2024-12-09 04:43:18,931 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=70.9 pTM=0.4 ipTM=0.232 tol=8.96
2024-12-09 04:43:29,265 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.408 ipTM=0.247 tol=5.68
2024-12-09 04:43:39,592 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.1 pTM=0.417 ipTM=0.242 tol=4.2
2024-12-09 04:43:49,923 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.9 pTM=0.422 ipTM=0.222 tol=2.28
2024-12-09 04:44:00,250 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.2 pTM=0.422 ipTM=0.215 tol=2.16
2024-12-09 04:44:10,573 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.9 pTM=0.429 ipTM=0.22 tol=2.36
2024-12-09 04:44:20,901 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.3 pTM=0.429 ipTM=0.193 tol=2.54
2024-12-09 04:44:31,223 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.8 pTM=0.434 ipTM=0.195 tol=3.05
2024-12-09 04:44:41,544 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.2 pTM=0.437 ipTM=0.202 tol=3.4
2024-12-09 04:44:51,864 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69.1 pTM=0.434 ipTM=0.216 tol=1.54
2024-12-09 04:45:02,180 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.2 pTM=0.432 ipTM=0.208 tol=1.92
2024-12-09 04:45:12,509 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.3 pTM=0.434 ipTM=0.215 tol=1.69
2024-12-09 04:45:22,848 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.3 pTM=0.432 ipTM=0.199 tol=2.77
2024-12-09 04:45:33,175 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.1 pTM=0.433 ipTM=0.214 tol=1.8
2024-12-09 04:45:43,501 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.2 pTM=0.433 ipTM=0.21 tol=1.55
2024-12-09 04:45:53,822 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.9 pTM=0.436 ipTM=0.219 tol=1.33
2024-12-09 04:46:04,140 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.6 pTM=0.44 ipTM=0.203 tol=1.03
2024-12-09 04:46:14,468 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.6 pTM=0.435 ipTM=0.23 tol=2.2
2024-12-09 04:46:24,791 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.5 pTM=0.433 ipTM=0.217 tol=1.86
2024-12-09 04:46:35,106 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.9 pTM=0.435 ipTM=0.213 tol=2.47
2024-12-09 04:46:45,435 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.3 pTM=0.436 ipTM=0.216 tol=1.74
2024-12-09 04:46:55,763 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.8 pTM=0.435 ipTM=0.241 tol=2.3
2024-12-09 04:47:06,082 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.6 pTM=0.437 ipTM=0.219 tol=2.1
2024-12-09 04:47:16,405 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.1 pTM=0.431 ipTM=0.217 tol=1.53
2024-12-09 04:47:26,724 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.3 pTM=0.435 ipTM=0.219 tol=1.48
2024-12-09 04:47:37,049 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.3 pTM=0.435 ipTM=0.214 tol=0.705
2024-12-09 04:47:47,366 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.1 pTM=0.435 ipTM=0.21 tol=0.944
2024-12-09 04:47:57,687 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.3 pTM=0.436 ipTM=0.207 tol=1.25
2024-12-09 04:48:08,014 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.4 pTM=0.435 ipTM=0.212 tol=1.48
2024-12-09 04:48:18,333 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.2 pTM=0.434 ipTM=0.212 tol=1.5
2024-12-09 04:48:18,333 alphafold2_multimer_v3_model_3_seed_000 took 320.1s (30 recycles)
2024-12-09 04:48:29,016 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.9 pTM=0.366 ipTM=0.306
2024-12-09 04:48:39,362 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.9 pTM=0.388 ipTM=0.226 tol=9.1
2024-12-09 04:48:49,700 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68 pTM=0.391 ipTM=0.199 tol=9.11
2024-12-09 04:49:00,030 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.6 pTM=0.396 ipTM=0.209 tol=2.61
2024-12-09 04:49:10,328 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.1 pTM=0.41 ipTM=0.188 tol=5.32
2024-12-09 04:49:20,655 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.4 pTM=0.415 ipTM=0.194 tol=2.58
2024-12-09 04:49:30,980 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.5 pTM=0.419 ipTM=0.189 tol=1.85
2024-12-09 04:49:41,294 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.9 pTM=0.416 ipTM=0.191 tol=1.85
2024-12-09 04:49:51,610 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.8 pTM=0.42 ipTM=0.186 tol=2.49
2024-12-09 04:50:01,924 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69 pTM=0.427 ipTM=0.196 tol=1.61
2024-12-09 04:50:12,241 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.7 pTM=0.423 ipTM=0.188 tol=1.17
2024-12-09 04:50:22,566 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.9 pTM=0.424 ipTM=0.194 tol=1.19
2024-12-09 04:50:32,889 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.8 pTM=0.425 ipTM=0.188 tol=1.26
2024-12-09 04:50:43,215 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69 pTM=0.421 ipTM=0.179 tol=1.21
2024-12-09 04:50:53,538 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.6 pTM=0.417 ipTM=0.192 tol=2.07
2024-12-09 04:51:03,871 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.4 pTM=0.415 ipTM=0.183 tol=1.29
2024-12-09 04:51:14,193 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.4 pTM=0.425 ipTM=0.193 tol=3.22
2024-12-09 04:51:24,515 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.9 pTM=0.421 ipTM=0.19 tol=4.39
2024-12-09 04:51:34,834 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.6 pTM=0.417 ipTM=0.212 tol=2.93
2024-12-09 04:51:45,159 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.6 pTM=0.413 ipTM=0.206 tol=2.17
2024-12-09 04:51:55,473 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.6 pTM=0.413 ipTM=0.21 tol=4.81
2024-12-09 04:52:05,782 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.3 pTM=0.411 ipTM=0.234 tol=1.41
2024-12-09 04:52:16,103 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.3 pTM=0.41 ipTM=0.214 tol=2.65
2024-12-09 04:52:26,419 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.6 pTM=0.417 ipTM=0.224 tol=2.55
2024-12-09 04:52:36,735 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.1 pTM=0.412 ipTM=0.199 tol=1.15
2024-12-09 04:52:47,050 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.5 pTM=0.418 ipTM=0.215 tol=0.865
2024-12-09 04:52:57,369 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.2 pTM=0.407 ipTM=0.202 tol=0.922
2024-12-09 04:53:07,683 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.7 pTM=0.409 ipTM=0.214 tol=1.1
2024-12-09 04:53:18,001 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.1 pTM=0.408 ipTM=0.21 tol=0.838
2024-12-09 04:53:28,321 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.9 pTM=0.403 ipTM=0.224 tol=2.12
2024-12-09 04:53:38,636 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=67.8 pTM=0.398 ipTM=0.22 tol=1.19
2024-12-09 04:53:38,636 alphafold2_multimer_v3_model_4_seed_000 took 320.0s (30 recycles)
2024-12-09 04:53:49,299 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.2 pTM=0.396 ipTM=0.244
2024-12-09 04:53:59,638 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.8 pTM=0.405 ipTM=0.22 tol=11.6
2024-12-09 04:54:09,970 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.5 pTM=0.413 ipTM=0.197 tol=7.13
2024-12-09 04:54:20,298 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69 pTM=0.42 ipTM=0.192 tol=2.9
2024-12-09 04:54:30,624 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.7 pTM=0.42 ipTM=0.176 tol=1.65
2024-12-09 04:54:40,950 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.7 pTM=0.428 ipTM=0.183 tol=1.78
2024-12-09 04:54:51,292 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.6 pTM=0.426 ipTM=0.178 tol=1.39
2024-12-09 04:55:01,620 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69 pTM=0.427 ipTM=0.185 tol=3.13
2024-12-09 04:55:11,953 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.8 pTM=0.426 ipTM=0.17 tol=1.92
2024-12-09 04:55:22,280 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.2 pTM=0.428 ipTM=0.186 tol=1.99
2024-12-09 04:55:32,616 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.8 pTM=0.423 ipTM=0.184 tol=1.76
2024-12-09 04:55:42,951 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.2 pTM=0.42 ipTM=0.18 tol=1.58
2024-12-09 04:55:53,288 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69 pTM=0.422 ipTM=0.162 tol=2.09
2024-12-09 04:56:03,631 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.9 pTM=0.422 ipTM=0.157 tol=2.02
2024-12-09 04:56:13,965 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.2 pTM=0.422 ipTM=0.173 tol=1.71
2024-12-09 04:56:24,305 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.8 pTM=0.423 ipTM=0.17 tol=2.31
2024-12-09 04:56:34,631 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.4 pTM=0.423 ipTM=0.167 tol=1.2
2024-12-09 04:56:44,968 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.9 pTM=0.426 ipTM=0.175 tol=1.32
2024-12-09 04:56:55,301 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.8 pTM=0.425 ipTM=0.171 tol=1.35
2024-12-09 04:57:05,628 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.9 pTM=0.423 ipTM=0.181 tol=0.908
2024-12-09 04:57:15,956 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.6 pTM=0.425 ipTM=0.18 tol=1.41
2024-12-09 04:57:26,285 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.8 pTM=0.425 ipTM=0.179 tol=1.81
2024-12-09 04:57:36,614 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.8 pTM=0.423 ipTM=0.166 tol=1.5
2024-12-09 04:57:46,946 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.9 pTM=0.425 ipTM=0.176 tol=1.43
2024-12-09 04:57:57,273 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.8 pTM=0.421 ipTM=0.181 tol=1.75
2024-12-09 04:58:07,597 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.2 pTM=0.425 ipTM=0.182 tol=0.926
2024-12-09 04:58:17,924 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.6 pTM=0.42 ipTM=0.182 tol=1.11
2024-12-09 04:58:28,256 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.4 pTM=0.422 ipTM=0.181 tol=0.905
2024-12-09 04:58:38,589 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.2 pTM=0.418 ipTM=0.177 tol=1.22
2024-12-09 04:58:48,918 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.3 pTM=0.421 ipTM=0.187 tol=1.3
2024-12-09 04:58:59,252 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.4 pTM=0.419 ipTM=0.182 tol=1.07
2024-12-09 04:58:59,253 alphafold2_multimer_v3_model_5_seed_000 took 320.3s (30 recycles)
2024-12-09 04:58:59,580 reranking models by 'multimer' metric
2024-12-09 04:59:00,700 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 05:00:11,066 Relaxation took 71.5s
2024-12-09 05:00:11,066 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=67.8 pTM=0.398 ipTM=0.22
2024-12-09 05:01:03,585 Relaxation took 52.5s
2024-12-09 05:01:03,585 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.2 pTM=0.434 ipTM=0.212
2024-12-09 05:01:47,784 Relaxation took 44.2s
2024-12-09 05:01:47,784 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.7 pTM=0.448 ipTM=0.179
2024-12-09 05:02:36,926 Relaxation took 49.1s
2024-12-09 05:02:36,926 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.4 pTM=0.419 ipTM=0.182
2024-12-09 05:03:31,398 Relaxation took 54.5s
2024-12-09 05:03:31,398 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.8 pTM=0.394 ipTM=0.183
2024-12-09 05:03:32,755 Done