2024-12-09 04:22:09,740 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 04:22:10,142 Running on GPU
2024-12-09 04:22:12,669 Found 6 citations for tools or databases
2024-12-09 04:22:12,669 Query 1/1: TRIM65_PDDC1 (length 737)
2024-12-09 04:22:17,795 Setting max_seq=508, max_extra_seq=2048
2024-12-09 04:26:03,037 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.8 pTM=0.35 ipTM=0.125
2024-12-09 04:26:17,213 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.2 pTM=0.355 ipTM=0.135 tol=13.9
2024-12-09 04:26:31,408 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.6 pTM=0.354 ipTM=0.145 tol=6.37
2024-12-09 04:26:45,604 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.8 pTM=0.363 ipTM=0.182 tol=5.52
2024-12-09 04:26:59,797 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.2 pTM=0.363 ipTM=0.186 tol=3.38
2024-12-09 04:27:13,999 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.2 pTM=0.358 ipTM=0.168 tol=4.33
2024-12-09 04:27:28,211 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.1 pTM=0.362 ipTM=0.182 tol=3.15
2024-12-09 04:27:42,410 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.2 pTM=0.359 ipTM=0.177 tol=3.47
2024-12-09 04:27:56,614 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.8 pTM=0.366 ipTM=0.21 tol=2.45
2024-12-09 04:28:10,816 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.2 pTM=0.357 ipTM=0.169 tol=1.77
2024-12-09 04:28:25,022 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.2 pTM=0.356 ipTM=0.168 tol=1.5
2024-12-09 04:28:39,235 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.1 pTM=0.359 ipTM=0.18 tol=2.17
2024-12-09 04:28:53,481 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77 pTM=0.359 ipTM=0.182 tol=1.32
2024-12-09 04:29:07,710 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.9 pTM=0.359 ipTM=0.182 tol=1.21
2024-12-09 04:29:21,927 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.9 pTM=0.363 ipTM=0.188 tol=1.59
2024-12-09 04:29:36,139 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.5 pTM=0.362 ipTM=0.195 tol=2.08
2024-12-09 04:29:50,355 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.4 pTM=0.364 ipTM=0.194 tol=1.38
2024-12-09 04:30:04,578 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.2 pTM=0.363 ipTM=0.191 tol=1.96
2024-12-09 04:30:18,815 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.2 pTM=0.365 ipTM=0.188 tol=1.38
2024-12-09 04:30:33,032 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.7 pTM=0.36 ipTM=0.181 tol=1.41
2024-12-09 04:30:47,261 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.8 pTM=0.361 ipTM=0.187 tol=1.01
2024-12-09 04:31:01,478 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.6 pTM=0.359 ipTM=0.186 tol=2.29
2024-12-09 04:31:15,696 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.2 pTM=0.365 ipTM=0.2 tol=1.35
2024-12-09 04:31:29,943 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77 pTM=0.363 ipTM=0.188 tol=1.34
2024-12-09 04:31:44,169 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.8 pTM=0.359 ipTM=0.179 tol=1.07
2024-12-09 04:31:58,387 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.6 pTM=0.361 ipTM=0.189 tol=1.16
2024-12-09 04:32:12,609 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.3 pTM=0.365 ipTM=0.196 tol=1.25
2024-12-09 04:32:26,834 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77 pTM=0.363 ipTM=0.189 tol=1.42
2024-12-09 04:32:41,066 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77 pTM=0.361 ipTM=0.183 tol=1.15
2024-12-09 04:32:55,302 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.9 pTM=0.362 ipTM=0.199 tol=2.3
2024-12-09 04:33:09,533 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.9 pTM=0.366 ipTM=0.203 tol=1.46
2024-12-09 04:33:09,533 alphafold2_multimer_v3_model_1_seed_000 took 644.9s (30 recycles)
2024-12-09 04:33:24,191 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76 pTM=0.363 ipTM=0.171
2024-12-09 04:33:38,465 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.8 pTM=0.378 ipTM=0.184 tol=14
2024-12-09 04:33:52,747 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.6 pTM=0.373 ipTM=0.219 tol=4.18
2024-12-09 04:34:07,032 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.9 pTM=0.369 ipTM=0.201 tol=3.46
2024-12-09 04:34:21,309 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.8 pTM=0.369 ipTM=0.212 tol=1.47
2024-12-09 04:34:35,587 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.9 pTM=0.37 ipTM=0.209 tol=1.43
2024-12-09 04:34:49,871 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.9 pTM=0.371 ipTM=0.215 tol=1.14
2024-12-09 04:35:04,140 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.1 pTM=0.372 ipTM=0.213 tol=1.49
2024-12-09 04:35:18,415 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79 pTM=0.374 ipTM=0.215 tol=2.38
2024-12-09 04:35:32,699 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.4 pTM=0.373 ipTM=0.213 tol=2.15
2024-12-09 04:35:46,985 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.4 pTM=0.375 ipTM=0.224 tol=1.52
2024-12-09 04:36:01,275 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.3 pTM=0.37 ipTM=0.207 tol=2.01
2024-12-09 04:36:15,548 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=79.3 pTM=0.373 ipTM=0.221 tol=1.56
2024-12-09 04:36:29,819 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.9 pTM=0.369 ipTM=0.206 tol=1.72
2024-12-09 04:36:44,095 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79.3 pTM=0.374 ipTM=0.219 tol=2.96
2024-12-09 04:36:58,373 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.8 pTM=0.37 ipTM=0.201 tol=3.27
2024-12-09 04:37:12,643 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.5 pTM=0.375 ipTM=0.217 tol=2.21
2024-12-09 04:37:26,906 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.5 pTM=0.374 ipTM=0.209 tol=1.43
2024-12-09 04:37:41,179 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.7 pTM=0.38 ipTM=0.22 tol=1.91
2024-12-09 04:37:55,438 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.5 pTM=0.38 ipTM=0.216 tol=1.08
2024-12-09 04:38:09,695 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.6 pTM=0.378 ipTM=0.219 tol=1.13
2024-12-09 04:38:23,948 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=79.3 pTM=0.374 ipTM=0.216 tol=2.13
2024-12-09 04:38:38,197 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=79.4 pTM=0.37 ipTM=0.201 tol=1.45
2024-12-09 04:38:52,483 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=79.7 pTM=0.378 ipTM=0.216 tol=3.16
2024-12-09 04:39:06,742 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79.4 pTM=0.375 ipTM=0.201 tol=1.74
2024-12-09 04:39:20,998 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=79.2 pTM=0.376 ipTM=0.219 tol=1.75
2024-12-09 04:39:35,244 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=79.9 pTM=0.379 ipTM=0.212 tol=1.25
2024-12-09 04:39:49,494 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=79.4 pTM=0.378 ipTM=0.214 tol=1.09
2024-12-09 04:40:03,759 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=79.5 pTM=0.377 ipTM=0.202 tol=0.919
2024-12-09 04:40:18,031 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=79.6 pTM=0.375 ipTM=0.215 tol=1.58
2024-12-09 04:40:32,288 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=79.3 pTM=0.375 ipTM=0.212 tol=0.78
2024-12-09 04:40:32,289 alphafold2_multimer_v3_model_2_seed_000 took 442.3s (30 recycles)
2024-12-09 04:40:46,972 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77 pTM=0.358 ipTM=0.134
2024-12-09 04:41:01,226 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.5 pTM=0.372 ipTM=0.197 tol=21.5
2024-12-09 04:41:15,477 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.9 pTM=0.378 ipTM=0.168 tol=7.36
2024-12-09 04:41:29,737 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.9 pTM=0.385 ipTM=0.201 tol=4.91
2024-12-09 04:41:43,993 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.7 pTM=0.387 ipTM=0.209 tol=3.97
2024-12-09 04:41:58,228 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.6 pTM=0.394 ipTM=0.226 tol=3.13
2024-12-09 04:42:12,459 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77.8 pTM=0.401 ipTM=0.241 tol=3.62
2024-12-09 04:42:26,698 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.7 pTM=0.397 ipTM=0.24 tol=2.12
2024-12-09 04:42:40,934 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.9 pTM=0.403 ipTM=0.248 tol=3.08
2024-12-09 04:42:55,178 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.9 pTM=0.397 ipTM=0.24 tol=2.69
2024-12-09 04:43:09,416 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.6 pTM=0.397 ipTM=0.238 tol=2.3
2024-12-09 04:43:23,663 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.6 pTM=0.397 ipTM=0.236 tol=3.01
2024-12-09 04:43:37,894 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.7 pTM=0.396 ipTM=0.229 tol=3.13
2024-12-09 04:43:52,138 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.3 pTM=0.39 ipTM=0.224 tol=4.21
2024-12-09 04:44:06,388 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.8 pTM=0.393 ipTM=0.219 tol=2.8
2024-12-09 04:44:20,635 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.5 pTM=0.394 ipTM=0.229 tol=2.09
2024-12-09 04:44:34,880 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78 pTM=0.398 ipTM=0.228 tol=2.91
2024-12-09 04:44:49,133 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.1 pTM=0.393 ipTM=0.219 tol=3.41
2024-12-09 04:45:03,380 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.9 pTM=0.397 ipTM=0.224 tol=3.43
2024-12-09 04:45:17,623 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78 pTM=0.398 ipTM=0.229 tol=2.25
2024-12-09 04:45:31,873 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.8 pTM=0.393 ipTM=0.225 tol=2.8
2024-12-09 04:45:46,107 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.9 pTM=0.395 ipTM=0.231 tol=3.15
2024-12-09 04:46:00,352 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78 pTM=0.395 ipTM=0.228 tol=2.71
2024-12-09 04:46:14,593 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.9 pTM=0.397 ipTM=0.236 tol=1.76
2024-12-09 04:46:28,829 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.6 pTM=0.397 ipTM=0.236 tol=2.24
2024-12-09 04:46:43,082 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.6 pTM=0.397 ipTM=0.236 tol=2.38
2024-12-09 04:46:57,328 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.8 pTM=0.4 ipTM=0.235 tol=2.36
2024-12-09 04:47:11,583 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.9 pTM=0.392 ipTM=0.216 tol=5.01
2024-12-09 04:47:25,832 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.7 pTM=0.393 ipTM=0.22 tol=2.45
2024-12-09 04:47:40,075 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.8 pTM=0.395 ipTM=0.217 tol=2.96
2024-12-09 04:47:54,318 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.7 pTM=0.395 ipTM=0.223 tol=1.91
2024-12-09 04:47:54,319 alphafold2_multimer_v3_model_3_seed_000 took 441.6s (30 recycles)
2024-12-09 04:48:09,002 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=78.3 pTM=0.393 ipTM=0.144
2024-12-09 04:48:23,235 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.5 pTM=0.418 ipTM=0.314 tol=28.7
2024-12-09 04:48:37,501 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.9 pTM=0.377 ipTM=0.204 tol=4.58
2024-12-09 04:48:51,794 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.2 pTM=0.381 ipTM=0.216 tol=5.62
2024-12-09 04:49:06,071 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.1 pTM=0.386 ipTM=0.244 tol=5.18
2024-12-09 04:49:20,330 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.8 pTM=0.384 ipTM=0.236 tol=4.61
2024-12-09 04:49:34,594 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.9 pTM=0.385 ipTM=0.242 tol=3.01
2024-12-09 04:49:48,863 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77 pTM=0.384 ipTM=0.24 tol=1.46
2024-12-09 04:50:03,129 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.6 pTM=0.386 ipTM=0.251 tol=2.72
2024-12-09 04:50:17,392 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.8 pTM=0.388 ipTM=0.255 tol=2.2
2024-12-09 04:50:31,644 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.9 pTM=0.391 ipTM=0.269 tol=2.36
2024-12-09 04:50:45,904 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.5 pTM=0.386 ipTM=0.262 tol=2.82
2024-12-09 04:51:00,153 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.6 pTM=0.385 ipTM=0.258 tol=2.62
2024-12-09 04:51:14,401 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.2 pTM=0.385 ipTM=0.252 tol=3.23
2024-12-09 04:51:28,661 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.8 pTM=0.383 ipTM=0.245 tol=2.29
2024-12-09 04:51:42,923 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.6 pTM=0.385 ipTM=0.248 tol=2.54
2024-12-09 04:51:57,201 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.1 pTM=0.385 ipTM=0.235 tol=1.94
2024-12-09 04:52:11,467 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.8 pTM=0.384 ipTM=0.246 tol=1.73
2024-12-09 04:52:25,726 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.7 pTM=0.388 ipTM=0.256 tol=2.45
2024-12-09 04:52:39,987 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=76.7 pTM=0.386 ipTM=0.244 tol=2.01
2024-12-09 04:52:54,251 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.6 pTM=0.384 ipTM=0.249 tol=1.62
2024-12-09 04:53:08,513 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=76.6 pTM=0.385 ipTM=0.248 tol=1.74
2024-12-09 04:53:22,770 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.6 pTM=0.387 ipTM=0.254 tol=2.76
2024-12-09 04:53:37,018 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.9 pTM=0.39 ipTM=0.258 tol=2.6
2024-12-09 04:53:51,271 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.8 pTM=0.389 ipTM=0.259 tol=1.38
2024-12-09 04:54:05,527 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.2 pTM=0.384 ipTM=0.248 tol=2.05
2024-12-09 04:54:19,778 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=76.4 pTM=0.388 ipTM=0.255 tol=2.52
2024-12-09 04:54:34,023 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.6 pTM=0.389 ipTM=0.254 tol=2.49
2024-12-09 04:54:48,270 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.5 pTM=0.386 ipTM=0.25 tol=1.08
2024-12-09 04:55:02,520 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.2 pTM=0.388 ipTM=0.257 tol=1.73
2024-12-09 04:55:16,773 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=76.8 pTM=0.388 ipTM=0.258 tol=1.89
2024-12-09 04:55:16,774 alphafold2_multimer_v3_model_4_seed_000 took 442.0s (30 recycles)
2024-12-09 04:55:31,474 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.8 pTM=0.365 ipTM=0.192
2024-12-09 04:55:45,749 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76.4 pTM=0.36 ipTM=0.17 tol=8.59
2024-12-09 04:56:00,009 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76 pTM=0.374 ipTM=0.235 tol=4.46
2024-12-09 04:56:14,276 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.8 pTM=0.368 ipTM=0.17 tol=3.86
2024-12-09 04:56:28,540 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.4 pTM=0.364 ipTM=0.184 tol=2.54
2024-12-09 04:56:42,804 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.4 pTM=0.363 ipTM=0.184 tol=4.02
2024-12-09 04:56:57,070 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.6 pTM=0.36 ipTM=0.184 tol=3.05
2024-12-09 04:57:11,331 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.7 pTM=0.368 ipTM=0.187 tol=2.95
2024-12-09 04:57:25,602 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.8 pTM=0.362 ipTM=0.185 tol=3.12
2024-12-09 04:57:39,869 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.4 pTM=0.363 ipTM=0.187 tol=3.56
2024-12-09 04:57:54,140 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.5 pTM=0.357 ipTM=0.171 tol=3.72
2024-12-09 04:58:08,411 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.3 pTM=0.361 ipTM=0.19 tol=2.62
2024-12-09 04:58:22,675 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.4 pTM=0.361 ipTM=0.191 tol=2.56
2024-12-09 04:58:36,946 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.3 pTM=0.363 ipTM=0.184 tol=2.67
2024-12-09 04:58:51,213 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=75.4 pTM=0.36 ipTM=0.196 tol=2.84
2024-12-09 04:59:05,483 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.8 pTM=0.363 ipTM=0.192 tol=1.75
2024-12-09 04:59:19,748 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75 pTM=0.365 ipTM=0.212 tol=1.79
2024-12-09 04:59:34,027 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.1 pTM=0.362 ipTM=0.191 tol=3.28
2024-12-09 04:59:48,297 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.2 pTM=0.358 ipTM=0.184 tol=3.01
2024-12-09 05:00:02,554 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.2 pTM=0.361 ipTM=0.185 tol=2.52
2024-12-09 05:00:16,826 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.3 pTM=0.358 ipTM=0.193 tol=2.44
2024-12-09 05:00:31,096 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.2 pTM=0.362 ipTM=0.204 tol=3.92
2024-12-09 05:00:45,373 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.4 pTM=0.359 ipTM=0.196 tol=4.34
2024-12-09 05:00:59,640 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.4 pTM=0.361 ipTM=0.182 tol=2.53
2024-12-09 05:01:13,912 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.1 pTM=0.358 ipTM=0.191 tol=2.03
2024-12-09 05:01:28,173 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.1 pTM=0.361 ipTM=0.194 tol=1.75
2024-12-09 05:01:42,436 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.1 pTM=0.366 ipTM=0.219 tol=3.01
2024-12-09 05:01:56,717 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.4 pTM=0.363 ipTM=0.182 tol=3.09
2024-12-09 05:02:10,977 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.4 pTM=0.359 ipTM=0.185 tol=2.55
2024-12-09 05:02:25,238 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.5 pTM=0.364 ipTM=0.183 tol=1.7
2024-12-09 05:02:39,500 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75.1 pTM=0.365 ipTM=0.205 tol=2.94
2024-12-09 05:02:39,501 alphafold2_multimer_v3_model_5_seed_000 took 442.3s (30 recycles)
2024-12-09 05:02:39,941 reranking models by 'multimer' metric
2024-12-09 05:02:43,166 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 05:03:27,543 Relaxation took 47.6s
2024-12-09 05:03:27,543 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.8 pTM=0.388 ipTM=0.258
2024-12-09 05:03:53,838 Relaxation took 26.3s
2024-12-09 05:03:53,838 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.7 pTM=0.395 ipTM=0.223
2024-12-09 05:05:08,582 Relaxation took 74.7s
2024-12-09 05:05:08,582 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.3 pTM=0.375 ipTM=0.212
2024-12-09 05:06:30,037 Relaxation took 81.5s
2024-12-09 05:06:30,037 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.1 pTM=0.365 ipTM=0.205
2024-12-09 05:07:12,230 Relaxation took 42.2s
2024-12-09 05:07:12,230 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.9 pTM=0.366 ipTM=0.203
2024-12-09 05:07:13,791 Done