2024-12-09 04:34:51,836 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 04:34:52,149 Running on GPU
2024-12-09 04:34:55,300 Found 6 citations for tools or databases
2024-12-09 04:34:55,300 Query 1/1: TRIM68_AHDC1 (length 2088)
2024-12-09 04:34:55,572 Sleeping for 6s. Reason: PENDING
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2024-12-09 04:35:59,633 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:36:06,889 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:36:16,152 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:36:24,411 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:36:32,666 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:36:40,927 Sleeping for 9s. Reason: RUNNING
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2024-12-09 04:37:00,448 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:37:08,710 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:37:18,974 Sleeping for 10s. Reason: RUNNING
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2024-12-09 04:37:46,756 Sleeping for 7s. Reason: RUNNING
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2024-12-09 04:38:03,276 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:38:11,535 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:38:22,313 Sleeping for 8s. Reason: PENDING
2024-12-09 04:38:30,576 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:38:35,828 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:38:46,094 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:38:51,348 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:38:59,609 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:39:06,866 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:39:17,133 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:39:25,389 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:39:35,649 Sleeping for 5s. Reason: RUNNING
2024-12-09 04:39:40,903 Sleeping for 7s. Reason: RUNNING
2024-12-09 04:39:48,156 Sleeping for 10s. Reason: RUNNING
2024-12-09 04:39:58,410 Sleeping for 9s. Reason: RUNNING
2024-12-09 04:40:08,019 Sleeping for 6s. Reason: RUNNING
2024-12-09 04:40:14,285 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:40:22,550 Sleeping for 8s. Reason: RUNNING
2024-12-09 04:40:34,303 Setting max_seq=508, max_extra_seq=2048
2024-12-09 04:45:30,943 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=34.7 pTM=0.331 ipTM=0.288
2024-12-09 04:48:25,172 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=34.8 pTM=0.327 ipTM=0.426 tol=14.8
2024-12-09 04:51:19,579 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=33.8 pTM=0.327 ipTM=0.39 tol=13.1
2024-12-09 04:54:14,069 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=34 pTM=0.323 ipTM=0.376 tol=10.1
2024-12-09 04:57:08,601 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.8 pTM=0.323 ipTM=0.386 tol=10.6
2024-12-09 05:00:03,105 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=33.9 pTM=0.323 ipTM=0.356 tol=7.66
2024-12-09 05:02:57,573 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=34.1 pTM=0.324 ipTM=0.358 tol=5.8
2024-12-09 05:05:52,075 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=34.2 pTM=0.324 ipTM=0.374 tol=6.07
2024-12-09 05:08:46,584 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=34.1 pTM=0.325 ipTM=0.366 tol=9.59
2024-12-09 05:11:41,070 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=34.3 pTM=0.324 ipTM=0.365 tol=8.2
2024-12-09 05:14:35,567 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=34.3 pTM=0.325 ipTM=0.383 tol=4.99
2024-12-09 05:17:30,064 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=34.2 pTM=0.324 ipTM=0.392 tol=4.71
2024-12-09 05:20:24,597 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=34.3 pTM=0.323 ipTM=0.393 tol=3.74
2024-12-09 05:23:19,098 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=34.2 pTM=0.323 ipTM=0.396 tol=3.73
2024-12-09 05:26:13,552 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=34.4 pTM=0.323 ipTM=0.377 tol=3.65
2024-12-09 05:29:08,061 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=34.1 pTM=0.323 ipTM=0.374 tol=5.82
2024-12-09 05:32:02,610 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=34.2 pTM=0.323 ipTM=0.392 tol=6.43
2024-12-09 05:34:57,174 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=34.1 pTM=0.323 ipTM=0.372 tol=5.93
2024-12-09 05:37:51,752 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=34.3 pTM=0.322 ipTM=0.37 tol=5.41
2024-12-09 05:40:46,278 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=34.2 pTM=0.322 ipTM=0.408 tol=3.8
2024-12-09 05:43:40,815 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=34 pTM=0.323 ipTM=0.394 tol=6.59
2024-12-09 05:46:35,370 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=34.2 pTM=0.323 ipTM=0.409 tol=6.05
2024-12-09 05:49:29,885 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=34 pTM=0.324 ipTM=0.407 tol=4.12
2024-12-09 05:52:24,377 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=34.3 pTM=0.324 ipTM=0.391 tol=5.32
2024-12-09 05:55:18,837 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=34.2 pTM=0.322 ipTM=0.404 tol=4.95
2024-12-09 05:58:13,309 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=34.5 pTM=0.322 ipTM=0.401 tol=9.95
2024-12-09 06:01:07,768 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=34.3 pTM=0.322 ipTM=0.39 tol=8.62
2024-12-09 06:04:02,240 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=34.3 pTM=0.323 ipTM=0.397 tol=4.29
2024-12-09 06:06:56,698 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=34.2 pTM=0.323 ipTM=0.401 tol=3.71
2024-12-09 06:09:51,211 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=34.2 pTM=0.323 ipTM=0.389 tol=3.5
2024-12-09 06:12:45,694 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=34.3 pTM=0.324 ipTM=0.404 tol=8.34
2024-12-09 06:12:45,696 alphafold2_multimer_v3_model_1_seed_000 took 5526.2s (30 recycles)
2024-12-09 06:15:42,523 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=33.8 pTM=0.334 ipTM=0.208
2024-12-09 06:18:36,931 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=34.3 pTM=0.341 ipTM=0.214 tol=15
2024-12-09 06:21:31,471 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.6 pTM=0.336 ipTM=0.207 tol=14.7
2024-12-09 06:24:26,033 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=33.8 pTM=0.333 ipTM=0.205 tol=15.4
2024-12-09 06:27:20,717 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.6 pTM=0.331 ipTM=0.243 tol=17.3
2024-12-09 06:30:15,279 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=33.8 pTM=0.333 ipTM=0.256 tol=13.6
2024-12-09 06:33:09,880 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=33.6 pTM=0.334 ipTM=0.252 tol=11.5
2024-12-09 06:36:04,544 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=33.5 pTM=0.332 ipTM=0.258 tol=10.1
2024-12-09 06:38:59,208 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=33.6 pTM=0.333 ipTM=0.266 tol=9.71
2024-12-09 06:41:53,887 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=33.8 pTM=0.332 ipTM=0.26 tol=12.7
2024-12-09 06:44:48,525 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=33.6 pTM=0.332 ipTM=0.258 tol=15.3
2024-12-09 06:47:43,180 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=33.6 pTM=0.334 ipTM=0.277 tol=9.95
2024-12-09 06:50:37,780 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=33.6 pTM=0.333 ipTM=0.264 tol=10.4
2024-12-09 06:53:32,414 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=33.5 pTM=0.333 ipTM=0.261 tol=9.55
2024-12-09 06:56:26,994 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=33.6 pTM=0.333 ipTM=0.254 tol=9.09
2024-12-09 06:59:21,691 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=33.6 pTM=0.332 ipTM=0.26 tol=9.64
2024-12-09 07:02:16,326 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=33.8 pTM=0.333 ipTM=0.261 tol=11.8
2024-12-09 07:05:10,961 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=33.6 pTM=0.334 ipTM=0.271 tol=10.4
2024-12-09 07:08:05,564 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=33.7 pTM=0.333 ipTM=0.26 tol=8.88
2024-12-09 07:11:00,211 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=33.5 pTM=0.334 ipTM=0.272 tol=9.14
2024-12-09 07:13:54,838 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=33.6 pTM=0.335 ipTM=0.263 tol=9.27
2024-12-09 07:16:49,437 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=33.6 pTM=0.335 ipTM=0.274 tol=8.84
2024-12-09 07:19:44,034 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=33.7 pTM=0.334 ipTM=0.269 tol=9.72
2024-12-09 07:22:38,673 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=33.7 pTM=0.335 ipTM=0.273 tol=7.92
2024-12-09 07:25:33,350 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=33.6 pTM=0.333 ipTM=0.262 tol=9.68
2024-12-09 07:28:27,962 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=33.6 pTM=0.333 ipTM=0.268 tol=8.12
2024-12-09 07:31:22,617 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=33.7 pTM=0.333 ipTM=0.267 tol=8.61
2024-12-09 07:34:17,249 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=33.7 pTM=0.333 ipTM=0.268 tol=6.91
2024-12-09 07:37:11,855 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=33.7 pTM=0.335 ipTM=0.27 tol=8.4
2024-12-09 07:40:06,418 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=33.6 pTM=0.333 ipTM=0.271 tol=8.15
2024-12-09 07:43:01,028 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=33.7 pTM=0.335 ipTM=0.267 tol=7.09
2024-12-09 07:43:01,031 alphafold2_multimer_v3_model_2_seed_000 took 5412.8s (30 recycles)
2024-12-09 07:45:59,007 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=31.5 pTM=0.326 ipTM=0.259
2024-12-09 07:48:54,793 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=31.5 pTM=0.327 ipTM=0.356 tol=26.6
2024-12-09 07:51:50,660 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=31.4 pTM=0.329 ipTM=0.369 tol=17.5
2024-12-09 07:54:46,593 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=31.7 pTM=0.33 ipTM=0.392 tol=15.6
2024-12-09 07:57:42,553 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=31.8 pTM=0.33 ipTM=0.396 tol=10.5
2024-12-09 08:00:38,566 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=31.8 pTM=0.331 ipTM=0.396 tol=8.09
2024-12-09 08:03:34,550 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=31.9 pTM=0.332 ipTM=0.401 tol=7.54
2024-12-09 08:06:30,570 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=31.9 pTM=0.331 ipTM=0.411 tol=6.86
2024-12-09 08:09:26,571 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=31.9 pTM=0.332 ipTM=0.416 tol=5.85
2024-12-09 08:12:22,559 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=32 pTM=0.331 ipTM=0.41 tol=7.02
2024-12-09 08:15:18,505 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=32 pTM=0.333 ipTM=0.418 tol=6.84
2024-12-09 08:18:14,534 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=31.9 pTM=0.331 ipTM=0.43 tol=6.03
2024-12-09 08:21:10,469 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=32 pTM=0.331 ipTM=0.447 tol=5.88
2024-12-09 08:24:06,408 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=32.1 pTM=0.332 ipTM=0.443 tol=5.73
2024-12-09 08:27:02,270 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=32.1 pTM=0.333 ipTM=0.458 tol=5.07
2024-12-09 08:29:58,140 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=32.1 pTM=0.333 ipTM=0.443 tol=6.76
2024-12-09 08:32:54,035 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=32.2 pTM=0.333 ipTM=0.444 tol=7.46
2024-12-09 08:35:49,895 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=32.2 pTM=0.333 ipTM=0.449 tol=5.54
2024-12-09 08:38:45,748 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=32.4 pTM=0.333 ipTM=0.463 tol=5.61
2024-12-09 08:41:41,669 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=32.4 pTM=0.333 ipTM=0.468 tol=5.91
2024-12-09 08:44:37,560 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=32.3 pTM=0.333 ipTM=0.463 tol=5.41
2024-12-09 08:47:33,444 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=32.3 pTM=0.332 ipTM=0.464 tol=6.14
2024-12-09 08:50:29,326 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=32.5 pTM=0.332 ipTM=0.472 tol=7.85
2024-12-09 08:53:25,221 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=32.4 pTM=0.332 ipTM=0.464 tol=15.3
2024-12-09 08:56:21,110 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=32.2 pTM=0.33 ipTM=0.462 tol=10.7
2024-12-09 08:59:16,943 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=32.3 pTM=0.332 ipTM=0.463 tol=7.2
2024-12-09 09:02:12,837 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=32.4 pTM=0.332 ipTM=0.47 tol=7.91
2024-12-09 09:05:08,756 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=32.4 pTM=0.333 ipTM=0.475 tol=12
2024-12-09 09:08:04,645 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=32.4 pTM=0.332 ipTM=0.466 tol=12
2024-12-09 09:11:00,537 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=32.3 pTM=0.333 ipTM=0.465 tol=11.8
2024-12-09 09:13:56,440 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=32.3 pTM=0.332 ipTM=0.47 tol=11.2
2024-12-09 09:13:56,443 alphafold2_multimer_v3_model_3_seed_000 took 5452.9s (30 recycles)
2024-12-09 09:16:54,572 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=30.7 pTM=0.311 ipTM=0.185
2024-12-09 09:19:50,829 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=30.6 pTM=0.316 ipTM=0.237 tol=22.8
2024-12-09 09:22:47,006 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=30.4 pTM=0.32 ipTM=0.253 tol=16.4
2024-12-09 09:25:43,378 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=30.3 pTM=0.318 ipTM=0.27 tol=16
2024-12-09 09:28:39,647 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=30.2 pTM=0.318 ipTM=0.26 tol=14.6
2024-12-09 09:31:35,913 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=30.3 pTM=0.32 ipTM=0.256 tol=15.4
2024-12-09 09:34:32,174 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=30.3 pTM=0.319 ipTM=0.271 tol=12.5
2024-12-09 09:37:28,529 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=30.2 pTM=0.32 ipTM=0.289 tol=14.2
2024-12-09 09:40:24,869 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=30.3 pTM=0.32 ipTM=0.34 tol=14.1
2024-12-09 09:43:21,312 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=30.4 pTM=0.319 ipTM=0.33 tol=11.1
2024-12-09 09:46:17,706 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=30.4 pTM=0.32 ipTM=0.337 tol=12.4
2024-12-09 09:49:14,112 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=30.4 pTM=0.32 ipTM=0.364 tol=10.5
2024-12-09 09:52:10,541 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=30.4 pTM=0.319 ipTM=0.346 tol=13.3
2024-12-09 09:55:06,948 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=30.4 pTM=0.32 ipTM=0.289 tol=13.6
2024-12-09 09:58:03,359 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=30.2 pTM=0.32 ipTM=0.344 tol=13.7
2024-12-09 10:00:59,767 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=30.4 pTM=0.319 ipTM=0.338 tol=14.4
2024-12-09 10:03:56,179 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=30.4 pTM=0.318 ipTM=0.366 tol=11.2
2024-12-09 10:06:52,570 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=30.3 pTM=0.319 ipTM=0.326 tol=10.3
2024-12-09 10:09:48,915 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=30.4 pTM=0.319 ipTM=0.296 tol=12.9
2024-12-09 10:12:45,261 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=30.5 pTM=0.319 ipTM=0.376 tol=9.73
2024-12-09 10:15:41,613 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=30.4 pTM=0.319 ipTM=0.336 tol=11.7
2024-12-09 10:18:37,952 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=30.2 pTM=0.318 ipTM=0.292 tol=9.48
2024-12-09 10:21:34,302 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=30.4 pTM=0.32 ipTM=0.388 tol=8.09
2024-12-09 10:24:30,703 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=30.3 pTM=0.318 ipTM=0.318 tol=9.74
2024-12-09 10:27:27,054 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=30.2 pTM=0.317 ipTM=0.272 tol=10.3
2024-12-09 10:30:23,368 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=30.3 pTM=0.318 ipTM=0.288 tol=11.8
2024-12-09 10:33:19,749 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=30.2 pTM=0.317 ipTM=0.339 tol=11.9
2024-12-09 10:36:16,139 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=30.3 pTM=0.318 ipTM=0.33 tol=11.9
2024-12-09 10:39:12,509 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=30.3 pTM=0.318 ipTM=0.358 tol=9.89
2024-12-09 10:42:08,827 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=30.2 pTM=0.317 ipTM=0.372 tol=11.5
2024-12-09 10:45:05,197 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=30.5 pTM=0.318 ipTM=0.396 tol=9.05
2024-12-09 10:45:05,199 alphafold2_multimer_v3_model_4_seed_000 took 5466.3s (30 recycles)
2024-12-09 10:48:03,356 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.1 pTM=0.322 ipTM=0.314
2024-12-09 10:50:59,684 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=31.3 pTM=0.323 ipTM=0.384 tol=27.9
2024-12-09 10:53:56,106 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31.5 pTM=0.324 ipTM=0.378 tol=23
2024-12-09 10:56:52,518 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=31.6 pTM=0.323 ipTM=0.38 tol=17.8
2024-12-09 10:59:48,994 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=31.7 pTM=0.324 ipTM=0.377 tol=20.2
2024-12-09 11:02:45,537 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=31.5 pTM=0.323 ipTM=0.364 tol=14.6
2024-12-09 11:05:41,981 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=31.8 pTM=0.324 ipTM=0.368 tol=18
2024-12-09 11:08:38,483 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=31.7 pTM=0.324 ipTM=0.383 tol=17
2024-12-09 11:11:34,964 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=31.8 pTM=0.325 ipTM=0.378 tol=19.4
2024-12-09 11:14:31,435 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=31.8 pTM=0.324 ipTM=0.38 tol=18.3
2024-12-09 11:17:27,817 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=31.9 pTM=0.325 ipTM=0.38 tol=13.7
2024-12-09 11:20:24,247 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=31.8 pTM=0.326 ipTM=0.399 tol=10.6
2024-12-09 11:23:20,697 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=31.9 pTM=0.326 ipTM=0.416 tol=19.8
2024-12-09 11:26:17,141 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=31.8 pTM=0.325 ipTM=0.417 tol=15.9
2024-12-09 11:29:13,555 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=31.9 pTM=0.325 ipTM=0.43 tol=18.8
2024-12-09 11:32:10,005 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=31.9 pTM=0.325 ipTM=0.429 tol=18.3
2024-12-09 11:35:06,485 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=31.9 pTM=0.324 ipTM=0.417 tol=14.1
2024-12-09 11:38:02,971 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=31.9 pTM=0.325 ipTM=0.434 tol=17.7
2024-12-09 11:40:59,438 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=32 pTM=0.324 ipTM=0.429 tol=12.6
2024-12-09 11:43:55,866 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=32 pTM=0.325 ipTM=0.447 tol=10.4
2024-12-09 11:46:52,288 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=32 pTM=0.326 ipTM=0.44 tol=15.7
2024-12-09 11:49:48,764 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=32 pTM=0.325 ipTM=0.446 tol=15.4
2024-12-09 11:52:45,209 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=32 pTM=0.326 ipTM=0.465 tol=10.6
2024-12-09 11:55:41,593 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=31.9 pTM=0.325 ipTM=0.456 tol=8.57
2024-12-09 11:58:38,013 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=31.9 pTM=0.325 ipTM=0.452 tol=9.68
2024-12-09 12:01:34,407 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=31.9 pTM=0.325 ipTM=0.452 tol=12.2
2024-12-09 12:04:30,870 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=32 pTM=0.326 ipTM=0.467 tol=9.62
2024-12-09 12:07:27,268 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=32 pTM=0.324 ipTM=0.464 tol=15.3
2024-12-09 12:10:23,690 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=32 pTM=0.325 ipTM=0.459 tol=10.2
2024-12-09 12:13:20,166 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=31.8 pTM=0.323 ipTM=0.455 tol=15.1
2024-12-09 12:16:16,607 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=31.9 pTM=0.325 ipTM=0.473 tol=18.6
2024-12-09 12:16:16,610 alphafold2_multimer_v3_model_5_seed_000 took 5468.9s (30 recycles)
2024-12-09 12:16:19,116 reranking models by 'multimer' metric
2024-12-09 12:16:23,207 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 12:21:32,744 Relaxation took 313.6s
2024-12-09 12:21:32,744 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=31.9 pTM=0.325 ipTM=0.473
2024-12-09 12:28:33,916 Relaxation took 421.2s
2024-12-09 12:28:33,916 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=32.3 pTM=0.332 ipTM=0.47
2024-12-09 12:33:49,188 Relaxation took 315.3s
2024-12-09 12:33:49,189 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=34.3 pTM=0.324 ipTM=0.404
2024-12-09 12:40:53,844 Relaxation took 424.7s
2024-12-09 12:40:53,844 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=30.5 pTM=0.318 ipTM=0.396
2024-12-09 12:45:43,379 Relaxation took 289.5s
2024-12-09 12:45:43,379 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=33.7 pTM=0.335 ipTM=0.267
2024-12-09 12:45:48,797 Done