2024-12-09 05:07:22,782 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 05:07:23,081 Running on GPU
2024-12-09 05:07:25,333 Found 6 citations for tools or databases
2024-12-09 05:07:25,333 Query 1/1: TRIM68_RBM38 (length 724)
2024-12-09 05:07:25,617 Sleeping for 5s. Reason: PENDING
2024-12-09 05:07:30,878 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:07:36,135 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:07:45,392 Sleeping for 8s. Reason: RUNNING
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2024-12-09 05:08:03,916 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:08:13,177 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:08:22,445 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:08:27,698 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:08:32,958 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:08:39,220 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:08:48,477 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:08:53,727 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:09:02,983 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:09:08,239 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:09:18,502 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:09:23,763 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:09:30,024 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:09:38,289 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:09:44,542 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:09:49,794 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:09:56,057 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:10:05,318 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:10:13,577 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:10:21,845 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:10:32,103 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:10:41,366 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:10:48,620 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:10:53,879 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:10:59,133 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:11:04,391 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:11:09,645 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:11:15,898 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:11:22,159 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:11:28,418 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:11:33,672 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:11:45,029 Sleeping for 8s. Reason: PENDING
2024-12-09 05:11:53,289 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:12:03,555 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:12:08,815 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:12:15,079 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:12:20,335 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:12:28,598 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:12:36,855 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:12:47,131 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:12:57,401 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:13:07,661 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:13:16,927 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:13:27,191 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:13:40,613 Setting max_seq=508, max_extra_seq=2048
2024-12-09 05:16:34,484 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.7 pTM=0.512 ipTM=0.21
2024-12-09 05:16:47,973 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.1 pTM=0.508 ipTM=0.23 tol=6.8
2024-12-09 05:17:01,469 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.501 ipTM=0.263 tol=5.54
2024-12-09 05:17:14,964 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.4 pTM=0.503 ipTM=0.248 tol=3.57
2024-12-09 05:17:28,460 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.9 pTM=0.503 ipTM=0.263 tol=3.98
2024-12-09 05:17:41,964 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.4 pTM=0.501 ipTM=0.23 tol=3.07
2024-12-09 05:17:55,468 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.3 pTM=0.503 ipTM=0.241 tol=6.24
2024-12-09 05:18:08,987 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.8 pTM=0.503 ipTM=0.23 tol=5.32
2024-12-09 05:18:22,503 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.4 pTM=0.504 ipTM=0.254 tol=4.93
2024-12-09 05:18:36,028 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.505 ipTM=0.248 tol=2.55
2024-12-09 05:18:49,548 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.2 pTM=0.501 ipTM=0.255 tol=3.9
2024-12-09 05:19:03,090 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.4 pTM=0.498 ipTM=0.239 tol=4.62
2024-12-09 05:19:16,611 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.2 pTM=0.498 ipTM=0.255 tol=4.86
2024-12-09 05:19:30,143 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.5 pTM=0.5 ipTM=0.23 tol=4.84
2024-12-09 05:19:43,672 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.501 ipTM=0.256 tol=3.21
2024-12-09 05:19:57,195 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.1 pTM=0.498 ipTM=0.231 tol=3.21
2024-12-09 05:20:10,721 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.3 pTM=0.502 ipTM=0.248 tol=2.45
2024-12-09 05:20:24,263 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.1 pTM=0.5 ipTM=0.228 tol=2.54
2024-12-09 05:20:37,785 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.2 pTM=0.5 ipTM=0.245 tol=2.88
2024-12-09 05:20:51,317 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.4 pTM=0.5 ipTM=0.226 tol=3.71
2024-12-09 05:21:04,838 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.1 pTM=0.497 ipTM=0.247 tol=4.57
2024-12-09 05:21:18,375 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.8 pTM=0.497 ipTM=0.221 tol=3.87
2024-12-09 05:21:31,901 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.2 pTM=0.494 ipTM=0.243 tol=4.91
2024-12-09 05:21:45,427 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.4 pTM=0.502 ipTM=0.226 tol=5.31
2024-12-09 05:21:58,961 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.4 pTM=0.496 ipTM=0.246 tol=3.86
2024-12-09 05:22:12,494 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.3 pTM=0.494 ipTM=0.219 tol=4.27
2024-12-09 05:22:26,027 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.2 pTM=0.502 ipTM=0.249 tol=4.02
2024-12-09 05:22:39,564 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.6 pTM=0.499 ipTM=0.228 tol=4.56
2024-12-09 05:22:53,096 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66 pTM=0.495 ipTM=0.239 tol=5.97
2024-12-09 05:23:06,654 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.6 pTM=0.499 ipTM=0.22 tol=4.59
2024-12-09 05:23:20,241 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.2 pTM=0.495 ipTM=0.251 tol=3.85
2024-12-09 05:23:20,242 alphafold2_multimer_v3_model_1_seed_000 took 573.1s (30 recycles)
2024-12-09 05:23:34,304 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65 pTM=0.519 ipTM=0.166
2024-12-09 05:23:47,938 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.5 pTM=0.516 ipTM=0.152 tol=7.08
2024-12-09 05:24:01,592 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.6 pTM=0.514 ipTM=0.217 tol=8.44
2024-12-09 05:24:15,257 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.8 pTM=0.511 ipTM=0.192 tol=4
2024-12-09 05:24:28,905 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67 pTM=0.51 ipTM=0.159 tol=4.98
2024-12-09 05:24:42,531 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67 pTM=0.514 ipTM=0.204 tol=3.38
2024-12-09 05:24:56,155 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.4 pTM=0.514 ipTM=0.213 tol=2.91
2024-12-09 05:25:09,775 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.4 pTM=0.517 ipTM=0.221 tol=2.46
2024-12-09 05:25:23,366 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.3 pTM=0.516 ipTM=0.241 tol=2.37
2024-12-09 05:25:36,950 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.2 pTM=0.521 ipTM=0.273 tol=4.05
2024-12-09 05:25:50,531 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.2 pTM=0.519 ipTM=0.259 tol=3.6
2024-12-09 05:26:04,132 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.3 pTM=0.523 ipTM=0.262 tol=3.28
2024-12-09 05:26:17,708 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.7 pTM=0.524 ipTM=0.272 tol=2.84
2024-12-09 05:26:31,274 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.4 pTM=0.52 ipTM=0.252 tol=3.53
2024-12-09 05:26:44,873 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.5 pTM=0.52 ipTM=0.271 tol=2.05
2024-12-09 05:26:58,453 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.4 pTM=0.521 ipTM=0.277 tol=3.71
2024-12-09 05:27:12,017 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.6 pTM=0.523 ipTM=0.264 tol=1.96
2024-12-09 05:27:25,580 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.7 pTM=0.527 ipTM=0.255 tol=1.67
2024-12-09 05:27:39,148 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.4 pTM=0.522 ipTM=0.235 tol=1.18
2024-12-09 05:27:52,727 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.6 pTM=0.525 ipTM=0.228 tol=1.37
2024-12-09 05:28:06,300 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.4 pTM=0.522 ipTM=0.225 tol=2.11
2024-12-09 05:28:19,880 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.7 pTM=0.528 ipTM=0.218 tol=2.58
2024-12-09 05:28:33,449 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.6 pTM=0.525 ipTM=0.214 tol=3.01
2024-12-09 05:28:46,999 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.8 pTM=0.528 ipTM=0.201 tol=2.37
2024-12-09 05:29:00,565 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.7 pTM=0.525 ipTM=0.187 tol=2.54
2024-12-09 05:29:14,165 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.6 pTM=0.522 ipTM=0.165 tol=1.34
2024-12-09 05:29:27,742 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.5 pTM=0.524 ipTM=0.161 tol=1.38
2024-12-09 05:29:41,293 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.6 pTM=0.525 ipTM=0.17 tol=2.64
2024-12-09 05:29:54,845 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.2 pTM=0.521 ipTM=0.155 tol=2.69
2024-12-09 05:30:08,439 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.8 pTM=0.524 ipTM=0.156 tol=3.2
2024-12-09 05:30:22,003 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.4 pTM=0.521 ipTM=0.164 tol=2.9
2024-12-09 05:30:22,003 alphafold2_multimer_v3_model_2_seed_000 took 421.3s (30 recycles)
2024-12-09 05:30:36,018 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.9 pTM=0.524 ipTM=0.155
2024-12-09 05:30:49,648 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.8 pTM=0.531 ipTM=0.285 tol=12.5
2024-12-09 05:31:03,256 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.2 pTM=0.533 ipTM=0.187 tol=10.7
2024-12-09 05:31:16,841 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.533 ipTM=0.199 tol=4.14
2024-12-09 05:31:30,438 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.1 pTM=0.532 ipTM=0.224 tol=7.95
2024-12-09 05:31:44,031 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.8 pTM=0.533 ipTM=0.191 tol=6.32
2024-12-09 05:31:57,645 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.3 pTM=0.53 ipTM=0.207 tol=5.39
2024-12-09 05:32:11,257 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.3 pTM=0.532 ipTM=0.196 tol=6.03
2024-12-09 05:32:24,873 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.6 pTM=0.535 ipTM=0.211 tol=5.59
2024-12-09 05:32:38,484 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.3 pTM=0.534 ipTM=0.219 tol=5.92
2024-12-09 05:32:52,093 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.6 pTM=0.534 ipTM=0.216 tol=2.99
2024-12-09 05:33:05,708 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.5 pTM=0.535 ipTM=0.224 tol=3.48
2024-12-09 05:33:19,322 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.6 pTM=0.535 ipTM=0.222 tol=3.87
2024-12-09 05:33:32,937 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.6 pTM=0.532 ipTM=0.231 tol=3.67
2024-12-09 05:33:46,529 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.6 pTM=0.534 ipTM=0.224 tol=4.85
2024-12-09 05:34:00,118 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.2 pTM=0.531 ipTM=0.22 tol=4.91
2024-12-09 05:34:13,749 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.6 pTM=0.533 ipTM=0.223 tol=3.63
2024-12-09 05:34:27,352 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.2 pTM=0.533 ipTM=0.22 tol=3.18
2024-12-09 05:34:40,948 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.6 pTM=0.535 ipTM=0.221 tol=4
2024-12-09 05:34:54,545 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.3 pTM=0.533 ipTM=0.219 tol=3
2024-12-09 05:35:08,160 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.4 pTM=0.533 ipTM=0.216 tol=3.75
2024-12-09 05:35:21,761 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.5 pTM=0.536 ipTM=0.222 tol=5.25
2024-12-09 05:35:35,355 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.6 pTM=0.533 ipTM=0.21 tol=5.79
2024-12-09 05:35:48,958 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.4 pTM=0.532 ipTM=0.223 tol=4.49
2024-12-09 05:36:02,583 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.5 pTM=0.532 ipTM=0.215 tol=3.56
2024-12-09 05:36:16,185 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.4 pTM=0.532 ipTM=0.225 tol=3.8
2024-12-09 05:36:29,784 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.4 pTM=0.531 ipTM=0.211 tol=5.44
2024-12-09 05:36:43,386 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.4 pTM=0.53 ipTM=0.219 tol=4.71
2024-12-09 05:36:56,997 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.1 pTM=0.528 ipTM=0.208 tol=3.64
2024-12-09 05:37:10,642 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.2 pTM=0.53 ipTM=0.225 tol=4.78
2024-12-09 05:37:24,277 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.2 pTM=0.53 ipTM=0.211 tol=3.12
2024-12-09 05:37:24,278 alphafold2_multimer_v3_model_3_seed_000 took 421.8s (30 recycles)
2024-12-09 05:37:38,360 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.7 pTM=0.527 ipTM=0.197
2024-12-09 05:37:52,000 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.8 pTM=0.537 ipTM=0.198 tol=10.5
2024-12-09 05:38:05,641 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.52 ipTM=0.275 tol=9.41
2024-12-09 05:38:19,276 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.7 pTM=0.518 ipTM=0.248 tol=4.94
2024-12-09 05:38:32,898 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.6 pTM=0.523 ipTM=0.221 tol=4.34
2024-12-09 05:38:46,494 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.6 pTM=0.521 ipTM=0.233 tol=3.69
2024-12-09 05:39:00,079 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.8 pTM=0.524 ipTM=0.223 tol=2.47
2024-12-09 05:39:13,671 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.8 pTM=0.521 ipTM=0.234 tol=2.81
2024-12-09 05:39:27,312 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.6 pTM=0.521 ipTM=0.23 tol=2.38
2024-12-09 05:39:40,911 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.6 pTM=0.52 ipTM=0.259 tol=3.29
2024-12-09 05:39:54,492 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.52 ipTM=0.23 tol=2.4
2024-12-09 05:40:08,116 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.8 pTM=0.52 ipTM=0.245 tol=2.44
2024-12-09 05:40:21,712 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.6 pTM=0.518 ipTM=0.234 tol=2.19
2024-12-09 05:40:35,333 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.8 pTM=0.52 ipTM=0.237 tol=2.31
2024-12-09 05:40:48,936 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.5 pTM=0.518 ipTM=0.241 tol=2.94
2024-12-09 05:41:02,559 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.5 pTM=0.517 ipTM=0.232 tol=3.32
2024-12-09 05:41:16,161 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.4 pTM=0.52 ipTM=0.198 tol=2.5
2024-12-09 05:41:29,747 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.6 pTM=0.52 ipTM=0.215 tol=2.92
2024-12-09 05:41:43,383 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.6 pTM=0.521 ipTM=0.221 tol=1.69
2024-12-09 05:41:56,994 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.4 pTM=0.519 ipTM=0.221 tol=2.23
2024-12-09 05:42:10,591 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.2 pTM=0.519 ipTM=0.219 tol=2.16
2024-12-09 05:42:24,195 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.6 pTM=0.525 ipTM=0.231 tol=2.74
2024-12-09 05:42:37,820 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.4 pTM=0.527 ipTM=0.247 tol=3.48
2024-12-09 05:42:51,437 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.7 pTM=0.528 ipTM=0.259 tol=2.45
2024-12-09 05:43:05,060 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.527 ipTM=0.243 tol=4.02
2024-12-09 05:43:18,684 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.4 pTM=0.532 ipTM=0.26 tol=3.34
2024-12-09 05:43:32,305 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.1 pTM=0.53 ipTM=0.249 tol=1.44
2024-12-09 05:43:45,911 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.4 pTM=0.53 ipTM=0.261 tol=1.79
2024-12-09 05:43:59,511 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.8 pTM=0.527 ipTM=0.252 tol=2.2
2024-12-09 05:44:13,119 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.8 pTM=0.521 ipTM=0.234 tol=4.69
2024-12-09 05:44:26,733 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.6 pTM=0.521 ipTM=0.233 tol=2.2
2024-12-09 05:44:26,734 alphafold2_multimer_v3_model_4_seed_000 took 422.0s (30 recycles)
2024-12-09 05:44:40,807 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.7 pTM=0.522 ipTM=0.314
2024-12-09 05:44:54,448 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.4 pTM=0.529 ipTM=0.194 tol=7.35
2024-12-09 05:45:08,069 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.5 pTM=0.522 ipTM=0.203 tol=7.09
2024-12-09 05:45:21,705 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.1 pTM=0.523 ipTM=0.225 tol=4.15
2024-12-09 05:45:35,313 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.9 pTM=0.523 ipTM=0.196 tol=3.89
2024-12-09 05:45:48,931 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66 pTM=0.527 ipTM=0.232 tol=3.3
2024-12-09 05:46:02,595 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.4 pTM=0.531 ipTM=0.183 tol=4.08
2024-12-09 05:46:16,229 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.2 pTM=0.53 ipTM=0.209 tol=5.23
2024-12-09 05:46:29,843 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.53 ipTM=0.209 tol=4.12
2024-12-09 05:46:43,450 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.2 pTM=0.526 ipTM=0.243 tol=2.61
2024-12-09 05:46:57,069 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.2 pTM=0.528 ipTM=0.2 tol=3
2024-12-09 05:47:10,688 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.3 pTM=0.527 ipTM=0.267 tol=3.33
2024-12-09 05:47:24,302 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.2 pTM=0.53 ipTM=0.21 tol=4.63
2024-12-09 05:47:37,906 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.9 pTM=0.529 ipTM=0.238 tol=2.63
2024-12-09 05:47:51,509 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.1 pTM=0.529 ipTM=0.204 tol=2.68
2024-12-09 05:48:05,141 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66 pTM=0.528 ipTM=0.258 tol=5.36
2024-12-09 05:48:18,757 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.2 pTM=0.528 ipTM=0.209 tol=5.7
2024-12-09 05:48:32,353 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.1 pTM=0.531 ipTM=0.241 tol=2.2
2024-12-09 05:48:45,953 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.2 pTM=0.529 ipTM=0.217 tol=1.82
2024-12-09 05:48:59,551 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.1 pTM=0.53 ipTM=0.241 tol=1.74
2024-12-09 05:49:13,179 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.2 pTM=0.53 ipTM=0.22 tol=2.27
2024-12-09 05:49:26,802 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.3 pTM=0.532 ipTM=0.231 tol=3.27
2024-12-09 05:49:40,418 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.2 pTM=0.53 ipTM=0.215 tol=2.86
2024-12-09 05:49:54,037 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.1 pTM=0.53 ipTM=0.217 tol=4.09
2024-12-09 05:50:07,651 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.9 pTM=0.53 ipTM=0.208 tol=3.76
2024-12-09 05:50:21,282 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.4 pTM=0.53 ipTM=0.219 tol=3.91
2024-12-09 05:50:34,906 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.1 pTM=0.53 ipTM=0.206 tol=3.81
2024-12-09 05:50:48,522 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.3 pTM=0.529 ipTM=0.22 tol=4.47
2024-12-09 05:51:02,135 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.8 pTM=0.527 ipTM=0.203 tol=3.16
2024-12-09 05:51:15,776 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.2 pTM=0.528 ipTM=0.245 tol=3.02
2024-12-09 05:51:29,401 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.1 pTM=0.529 ipTM=0.198 tol=4.35
2024-12-09 05:51:29,401 alphafold2_multimer_v3_model_5_seed_000 took 422.2s (30 recycles)
2024-12-09 05:51:29,830 reranking models by 'multimer' metric
2024-12-09 05:51:31,514 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 05:52:04,524 Relaxation took 34.7s
2024-12-09 05:52:04,524 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.2 pTM=0.495 ipTM=0.251
2024-12-09 05:52:46,834 Relaxation took 42.3s
2024-12-09 05:52:46,835 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.6 pTM=0.521 ipTM=0.233
2024-12-09 05:53:37,956 Relaxation took 51.1s
2024-12-09 05:53:37,956 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.2 pTM=0.53 ipTM=0.211
2024-12-09 05:54:31,167 Relaxation took 53.2s
2024-12-09 05:54:31,167 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.1 pTM=0.529 ipTM=0.198
2024-12-09 05:55:08,227 Relaxation took 37.1s
2024-12-09 05:55:08,228 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.4 pTM=0.521 ipTM=0.164
2024-12-09 05:55:10,068 Done