2024-12-09 05:28:25,789 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 05:28:26,094 Running on GPU
2024-12-09 05:28:28,323 Found 6 citations for tools or databases
2024-12-09 05:28:28,323 Query 1/1: TRIM71_RPL19 (length 1064)
2024-12-09 05:28:28,586 Sleeping for 5s. Reason: PENDING
2024-12-09 05:28:33,851 Sleeping for 5s. Reason: PENDING
2024-12-09 05:28:39,111 Sleeping for 8s. Reason: PENDING
2024-12-09 05:28:47,372 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:28:57,633 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:29:06,893 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:29:15,153 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:29:23,413 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:29:30,675 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:29:36,928 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:29:46,193 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:29:53,456 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:30:00,713 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:30:05,969 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:30:16,228 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:30:21,483 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:30:31,739 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:30:41,996 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:30:51,257 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:30:58,512 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:31:09,030 Sleeping for 10s. Reason: PENDING
2024-12-09 05:31:19,300 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:31:28,563 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:31:35,819 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:31:44,091 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:31:50,357 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:31:56,621 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:32:03,890 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:32:13,153 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:32:21,407 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:32:30,669 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:32:43,032 Setting max_seq=508, max_extra_seq=2048
2024-12-09 05:34:59,012 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.6 pTM=0.413 ipTM=0.23
2024-12-09 05:35:20,657 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.8 pTM=0.399 ipTM=0.217 tol=11.6
2024-12-09 05:35:42,403 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.7 pTM=0.397 ipTM=0.219 tol=5.61
2024-12-09 05:36:04,254 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.4 pTM=0.401 ipTM=0.229 tol=3.24
2024-12-09 05:36:26,184 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.1 pTM=0.399 ipTM=0.212 tol=2.53
2024-12-09 05:36:48,159 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.1 pTM=0.397 ipTM=0.226 tol=2.28
2024-12-09 05:37:10,116 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.2 pTM=0.396 ipTM=0.214 tol=1.44
2024-12-09 05:37:32,090 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.5 pTM=0.395 ipTM=0.217 tol=1.54
2024-12-09 05:37:54,059 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.2 pTM=0.397 ipTM=0.216 tol=2.14
2024-12-09 05:38:16,032 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.4 pTM=0.4 ipTM=0.216 tol=1.28
2024-12-09 05:38:38,027 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.2 pTM=0.396 ipTM=0.206 tol=1.85
2024-12-09 05:39:00,017 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71 pTM=0.395 ipTM=0.214 tol=2.29
2024-12-09 05:39:21,996 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.1 pTM=0.395 ipTM=0.204 tol=2
2024-12-09 05:39:44,016 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.3 pTM=0.396 ipTM=0.219 tol=2.47
2024-12-09 05:40:06,006 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.1 pTM=0.394 ipTM=0.208 tol=1.61
2024-12-09 05:40:27,969 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.2 pTM=0.396 ipTM=0.217 tol=1.92
2024-12-09 05:40:49,990 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.4 pTM=0.398 ipTM=0.206 tol=2.03
2024-12-09 05:41:12,008 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.2 pTM=0.398 ipTM=0.21 tol=1.98
2024-12-09 05:41:34,010 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.1 pTM=0.4 ipTM=0.208 tol=2.23
2024-12-09 05:41:56,047 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.2 pTM=0.4 ipTM=0.217 tol=2.14
2024-12-09 05:42:18,097 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.1 pTM=0.397 ipTM=0.209 tol=2.36
2024-12-09 05:42:40,163 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.1 pTM=0.398 ipTM=0.211 tol=1.62
2024-12-09 05:43:02,204 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.1 pTM=0.399 ipTM=0.204 tol=2.29
2024-12-09 05:43:24,229 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.9 pTM=0.396 ipTM=0.214 tol=1.52
2024-12-09 05:43:46,268 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.2 pTM=0.4 ipTM=0.213 tol=2.14
2024-12-09 05:44:08,341 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71 pTM=0.403 ipTM=0.224 tol=1.19
2024-12-09 05:44:30,414 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.9 pTM=0.4 ipTM=0.208 tol=1.96
2024-12-09 05:44:52,466 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.7 pTM=0.396 ipTM=0.205 tol=1.48
2024-12-09 05:45:14,510 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.2 pTM=0.401 ipTM=0.206 tol=2.33
2024-12-09 05:45:36,556 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.8 pTM=0.398 ipTM=0.216 tol=2.74
2024-12-09 05:45:58,602 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.7 pTM=0.393 ipTM=0.212 tol=1.96
2024-12-09 05:45:58,603 alphafold2_multimer_v3_model_1_seed_000 took 790.6s (30 recycles)
2024-12-09 05:46:21,384 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.7 pTM=0.412 ipTM=0.248
2024-12-09 05:46:43,491 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.4 pTM=0.406 ipTM=0.186 tol=22.6
2024-12-09 05:47:05,566 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.7 pTM=0.406 ipTM=0.171 tol=5.22
2024-12-09 05:47:27,663 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.6 pTM=0.408 ipTM=0.173 tol=6.3
2024-12-09 05:47:49,733 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.4 pTM=0.409 ipTM=0.169 tol=4.31
2024-12-09 05:48:11,796 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.1 pTM=0.411 ipTM=0.178 tol=4.76
2024-12-09 05:48:33,898 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.1 pTM=0.413 ipTM=0.178 tol=2.77
2024-12-09 05:48:55,987 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.4 pTM=0.413 ipTM=0.18 tol=2.02
2024-12-09 05:49:18,132 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.2 pTM=0.413 ipTM=0.178 tol=2.32
2024-12-09 05:49:40,270 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.2 pTM=0.414 ipTM=0.174 tol=2.56
2024-12-09 05:50:02,402 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.2 pTM=0.414 ipTM=0.177 tol=2.92
2024-12-09 05:50:24,539 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.2 pTM=0.413 ipTM=0.175 tol=2.27
2024-12-09 05:50:46,648 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.4 pTM=0.413 ipTM=0.173 tol=1.33
2024-12-09 05:51:08,768 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.3 pTM=0.413 ipTM=0.174 tol=0.957
2024-12-09 05:51:30,899 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.2 pTM=0.415 ipTM=0.173 tol=0.614
2024-12-09 05:51:53,006 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.2 pTM=0.416 ipTM=0.182 tol=2.3
2024-12-09 05:52:15,122 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.2 pTM=0.416 ipTM=0.179 tol=1.73
2024-12-09 05:52:37,254 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.4 pTM=0.418 ipTM=0.176 tol=1.7
2024-12-09 05:52:59,363 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.2 pTM=0.416 ipTM=0.173 tol=1.95
2024-12-09 05:53:21,406 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.4 pTM=0.418 ipTM=0.179 tol=1.26
2024-12-09 05:53:43,467 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.1 pTM=0.413 ipTM=0.18 tol=1.94
2024-12-09 05:54:05,514 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.2 pTM=0.416 ipTM=0.178 tol=0.981
2024-12-09 05:54:27,583 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.2 pTM=0.415 ipTM=0.174 tol=0.753
2024-12-09 05:54:49,638 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.9 pTM=0.414 ipTM=0.179 tol=0.921
2024-12-09 05:55:11,718 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.2 pTM=0.418 ipTM=0.179 tol=2.11
2024-12-09 05:55:33,837 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.2 pTM=0.419 ipTM=0.186 tol=1.56
2024-12-09 05:55:55,953 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.4 pTM=0.417 ipTM=0.173 tol=1.38
2024-12-09 05:56:18,070 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.2 pTM=0.417 ipTM=0.179 tol=0.911
2024-12-09 05:56:40,189 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.2 pTM=0.418 ipTM=0.177 tol=1.12
2024-12-09 05:57:02,292 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.1 pTM=0.414 ipTM=0.175 tol=0.947
2024-12-09 05:57:24,410 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73 pTM=0.412 ipTM=0.177 tol=1.03
2024-12-09 05:57:24,411 alphafold2_multimer_v3_model_2_seed_000 took 685.1s (30 recycles)
2024-12-09 05:57:47,320 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.2 pTM=0.405 ipTM=0.232
2024-12-09 05:58:09,487 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.2 pTM=0.421 ipTM=0.245 tol=10.1
2024-12-09 05:58:31,609 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.9 pTM=0.423 ipTM=0.232 tol=6.22
2024-12-09 05:58:53,736 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.4 pTM=0.432 ipTM=0.248 tol=2.68
2024-12-09 05:59:15,863 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.2 pTM=0.432 ipTM=0.239 tol=2.12
2024-12-09 05:59:37,978 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.4 pTM=0.43 ipTM=0.242 tol=2.21
2024-12-09 06:00:00,086 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.4 pTM=0.432 ipTM=0.242 tol=1.32
2024-12-09 06:00:22,151 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.2 pTM=0.429 ipTM=0.233 tol=1.35
2024-12-09 06:00:44,211 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.2 pTM=0.431 ipTM=0.245 tol=1.58
2024-12-09 06:01:06,266 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.2 pTM=0.431 ipTM=0.224 tol=1
2024-12-09 06:01:28,326 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.2 pTM=0.43 ipTM=0.237 tol=1.04
2024-12-09 06:01:50,404 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.4 pTM=0.43 ipTM=0.235 tol=1.32
2024-12-09 06:02:12,455 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.4 pTM=0.431 ipTM=0.232 tol=1.33
2024-12-09 06:02:34,475 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.1 pTM=0.429 ipTM=0.236 tol=1.64
2024-12-09 06:02:56,492 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.1 pTM=0.43 ipTM=0.235 tol=1.05
2024-12-09 06:03:18,533 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.2 pTM=0.428 ipTM=0.233 tol=1.05
2024-12-09 06:03:40,575 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.2 pTM=0.427 ipTM=0.225 tol=1.58
2024-12-09 06:04:02,622 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71 pTM=0.428 ipTM=0.224 tol=1.41
2024-12-09 06:04:24,689 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.1 pTM=0.436 ipTM=0.228 tol=2.1
2024-12-09 06:04:46,711 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.1 pTM=0.436 ipTM=0.224 tol=1.86
2024-12-09 06:05:08,765 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.2 pTM=0.436 ipTM=0.228 tol=0.951
2024-12-09 06:05:30,819 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.3 pTM=0.434 ipTM=0.217 tol=1.17
2024-12-09 06:05:52,892 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.3 pTM=0.437 ipTM=0.226 tol=0.84
2024-12-09 06:06:14,950 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.2 pTM=0.434 ipTM=0.224 tol=0.928
2024-12-09 06:06:37,023 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.1 pTM=0.429 ipTM=0.216 tol=0.954
2024-12-09 06:06:59,102 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.1 pTM=0.434 ipTM=0.223 tol=0.957
2024-12-09 06:07:21,129 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71 pTM=0.433 ipTM=0.219 tol=0.885
2024-12-09 06:07:43,185 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.2 pTM=0.43 ipTM=0.22 tol=0.844
2024-12-09 06:08:05,185 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71 pTM=0.429 ipTM=0.222 tol=1.14
2024-12-09 06:08:27,246 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.1 pTM=0.428 ipTM=0.207 tol=0.833
2024-12-09 06:08:49,311 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.9 pTM=0.427 ipTM=0.205 tol=1.17
2024-12-09 06:08:49,312 alphafold2_multimer_v3_model_3_seed_000 took 684.2s (30 recycles)
2024-12-09 06:09:12,283 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.9 pTM=0.394 ipTM=0.225
2024-12-09 06:09:34,442 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.7 pTM=0.408 ipTM=0.204 tol=26.5
2024-12-09 06:09:56,571 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.2 pTM=0.413 ipTM=0.202 tol=10.6
2024-12-09 06:10:18,677 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70 pTM=0.422 ipTM=0.216 tol=5.52
2024-12-09 06:10:40,797 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.8 pTM=0.423 ipTM=0.208 tol=4.42
2024-12-09 06:11:02,912 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.9 pTM=0.423 ipTM=0.207 tol=3.6
2024-12-09 06:11:25,000 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.8 pTM=0.422 ipTM=0.196 tol=2.7
2024-12-09 06:11:47,085 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.8 pTM=0.423 ipTM=0.204 tol=1.96
2024-12-09 06:12:09,209 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.7 pTM=0.426 ipTM=0.21 tol=2.84
2024-12-09 06:12:31,308 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.7 pTM=0.426 ipTM=0.2 tol=2.48
2024-12-09 06:12:53,394 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.8 pTM=0.427 ipTM=0.206 tol=2.14
2024-12-09 06:13:15,519 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.424 ipTM=0.202 tol=2.07
2024-12-09 06:13:37,630 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.7 pTM=0.422 ipTM=0.19 tol=2.9
2024-12-09 06:13:59,747 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.425 ipTM=0.2 tol=2.73
2024-12-09 06:14:21,838 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.426 ipTM=0.211 tol=1.76
2024-12-09 06:14:43,918 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.6 pTM=0.422 ipTM=0.192 tol=1.51
2024-12-09 06:15:06,048 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.9 pTM=0.425 ipTM=0.2 tol=1.15
2024-12-09 06:15:28,108 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.6 pTM=0.426 ipTM=0.195 tol=1.4
2024-12-09 06:15:50,186 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.7 pTM=0.427 ipTM=0.196 tol=2.4
2024-12-09 06:16:12,238 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.7 pTM=0.427 ipTM=0.189 tol=2.99
2024-12-09 06:16:34,342 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.7 pTM=0.424 ipTM=0.195 tol=2.84
2024-12-09 06:16:56,422 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.6 pTM=0.423 ipTM=0.191 tol=2.56
2024-12-09 06:17:18,518 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.6 pTM=0.426 ipTM=0.197 tol=1.69
2024-12-09 06:17:40,587 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.2 pTM=0.425 ipTM=0.21 tol=2.93
2024-12-09 06:18:02,658 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.8 pTM=0.426 ipTM=0.201 tol=2.33
2024-12-09 06:18:24,703 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.4 pTM=0.425 ipTM=0.201 tol=1.43
2024-12-09 06:18:46,754 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.6 pTM=0.425 ipTM=0.199 tol=1.42
2024-12-09 06:19:08,832 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.3 pTM=0.421 ipTM=0.195 tol=1.58
2024-12-09 06:19:30,891 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.5 pTM=0.422 ipTM=0.201 tol=1.79
2024-12-09 06:19:52,976 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.2 pTM=0.424 ipTM=0.203 tol=1.21
2024-12-09 06:20:15,070 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.6 pTM=0.422 ipTM=0.202 tol=1.15
2024-12-09 06:20:15,071 alphafold2_multimer_v3_model_4_seed_000 took 685.1s (30 recycles)
2024-12-09 06:20:37,881 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.8 pTM=0.416 ipTM=0.246
2024-12-09 06:20:59,968 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71 pTM=0.413 ipTM=0.267 tol=8.84
2024-12-09 06:21:22,073 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.8 pTM=0.414 ipTM=0.249 tol=6.21
2024-12-09 06:21:44,153 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.9 pTM=0.418 ipTM=0.243 tol=3.48
2024-12-09 06:22:06,248 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.8 pTM=0.417 ipTM=0.232 tol=4.03
2024-12-09 06:22:28,370 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.9 pTM=0.416 ipTM=0.226 tol=3.41
2024-12-09 06:22:50,504 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.9 pTM=0.419 ipTM=0.226 tol=2.05
2024-12-09 06:23:12,624 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71 pTM=0.419 ipTM=0.217 tol=2.01
2024-12-09 06:23:34,770 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.8 pTM=0.42 ipTM=0.227 tol=2.22
2024-12-09 06:23:56,885 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71 pTM=0.424 ipTM=0.222 tol=1.7
2024-12-09 06:24:19,029 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.8 pTM=0.418 ipTM=0.215 tol=1.7
2024-12-09 06:24:41,157 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.8 pTM=0.417 ipTM=0.21 tol=2.47
2024-12-09 06:25:03,273 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71 pTM=0.422 ipTM=0.209 tol=2.06
2024-12-09 06:25:25,367 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.8 pTM=0.418 ipTM=0.214 tol=3.08
2024-12-09 06:25:47,414 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.8 pTM=0.422 ipTM=0.223 tol=3.51
2024-12-09 06:26:09,477 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.8 pTM=0.418 ipTM=0.21 tol=2.79
2024-12-09 06:26:31,548 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71 pTM=0.424 ipTM=0.213 tol=1.73
2024-12-09 06:26:53,603 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.6 pTM=0.423 ipTM=0.21 tol=2.3
2024-12-09 06:27:15,673 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.4 pTM=0.428 ipTM=0.215 tol=2.21
2024-12-09 06:27:37,733 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.9 pTM=0.425 ipTM=0.209 tol=1.79
2024-12-09 06:27:59,773 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.5 pTM=0.423 ipTM=0.219 tol=1.95
2024-12-09 06:28:21,799 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.8 pTM=0.423 ipTM=0.212 tol=1.56
2024-12-09 06:28:43,858 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.9 pTM=0.423 ipTM=0.216 tol=1.14
2024-12-09 06:29:05,904 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.8 pTM=0.424 ipTM=0.223 tol=1.99
2024-12-09 06:29:27,993 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.9 pTM=0.424 ipTM=0.22 tol=1.74
2024-12-09 06:29:50,052 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.8 pTM=0.427 ipTM=0.221 tol=1.16
2024-12-09 06:30:12,131 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.8 pTM=0.427 ipTM=0.216 tol=1.74
2024-12-09 06:30:34,174 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.9 pTM=0.425 ipTM=0.218 tol=1.62
2024-12-09 06:30:56,252 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.6 pTM=0.423 ipTM=0.224 tol=1.22
2024-12-09 06:31:18,357 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.8 pTM=0.42 ipTM=0.218 tol=1.48
2024-12-09 06:31:40,433 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.9 pTM=0.421 ipTM=0.216 tol=1.25
2024-12-09 06:31:40,434 alphafold2_multimer_v3_model_5_seed_000 took 684.7s (30 recycles)
2024-12-09 06:31:41,128 reranking models by 'multimer' metric
2024-12-09 06:31:42,392 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 06:33:21,649 Relaxation took 100.5s
2024-12-09 06:33:21,649 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.9 pTM=0.421 ipTM=0.216
2024-12-09 06:35:23,038 Relaxation took 121.4s
2024-12-09 06:35:23,038 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.9 pTM=0.427 ipTM=0.205
2024-12-09 06:37:19,612 Relaxation took 116.6s
2024-12-09 06:37:19,613 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.7 pTM=0.393 ipTM=0.212
2024-12-09 06:39:31,808 Relaxation took 132.2s
2024-12-09 06:39:31,808 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.6 pTM=0.422 ipTM=0.202
2024-12-09 06:40:57,178 Relaxation took 85.4s
2024-12-09 06:40:57,178 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73 pTM=0.412 ipTM=0.177
2024-12-09 06:40:59,232 Done