2024-12-09 05:46:51,378 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 05:46:51,725 Running on GPU
2024-12-09 05:46:54,839 Found 6 citations for tools or databases
2024-12-09 05:46:54,839 Query 1/1: TRIM71_SURF6 (length 1229)
2024-12-09 05:46:55,119 Sleeping for 7s. Reason: PENDING
2024-12-09 05:47:02,374 Sleeping for 9s. Reason: RUNNING
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2024-12-09 05:47:58,194 Sleeping for 6s. Reason: RUNNING
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2024-12-09 05:48:30,225 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:48:35,846 Sleeping for 6s. Reason: RUNNING
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2024-12-09 05:48:52,364 Sleeping for 7s. Reason: RUNNING
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2024-12-09 05:49:18,150 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:49:33,953 Sleeping for 5s. Reason: PENDING
2024-12-09 05:49:39,224 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:49:47,484 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:49:53,737 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:50:01,001 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:50:08,267 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:50:16,523 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:50:22,785 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:50:30,055 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:50:38,312 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:50:48,570 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:50:56,838 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:51:09,831 Setting max_seq=508, max_extra_seq=2048
2024-12-09 05:55:28,813 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.1 pTM=0.377 ipTM=0.17
2024-12-09 05:56:09,115 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.374 ipTM=0.183 tol=9.05
2024-12-09 05:56:49,583 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.1 pTM=0.369 ipTM=0.272 tol=4.63
2024-12-09 05:57:30,181 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.4 pTM=0.363 ipTM=0.189 tol=2.76
2024-12-09 05:58:10,841 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.2 pTM=0.367 ipTM=0.19 tol=2.33
2024-12-09 05:58:51,547 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.2 pTM=0.366 ipTM=0.193 tol=2.24
2024-12-09 05:59:32,315 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64 pTM=0.365 ipTM=0.187 tol=2.26
2024-12-09 06:00:13,030 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.2 pTM=0.365 ipTM=0.191 tol=1.92
2024-12-09 06:00:53,768 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.1 pTM=0.363 ipTM=0.182 tol=2.11
2024-12-09 06:01:34,528 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.1 pTM=0.362 ipTM=0.193 tol=1.62
2024-12-09 06:02:15,338 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.1 pTM=0.362 ipTM=0.197 tol=2.33
2024-12-09 06:02:56,140 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.9 pTM=0.359 ipTM=0.185 tol=2.61
2024-12-09 06:03:36,996 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.4 pTM=0.365 ipTM=0.205 tol=2.77
2024-12-09 06:04:17,781 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.2 pTM=0.359 ipTM=0.186 tol=4.5
2024-12-09 06:04:58,496 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.7 pTM=0.359 ipTM=0.207 tol=3.84
2024-12-09 06:05:39,279 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.8 pTM=0.359 ipTM=0.216 tol=2
2024-12-09 06:06:19,959 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.9 pTM=0.363 ipTM=0.209 tol=2.25
2024-12-09 06:07:00,639 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.6 pTM=0.364 ipTM=0.22 tol=2.57
2024-12-09 06:07:41,325 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.8 pTM=0.363 ipTM=0.221 tol=3.32
2024-12-09 06:08:21,987 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.8 pTM=0.361 ipTM=0.218 tol=2.84
2024-12-09 06:09:02,662 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.4 pTM=0.361 ipTM=0.22 tol=3.8
2024-12-09 06:09:43,297 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.4 pTM=0.361 ipTM=0.223 tol=4.26
2024-12-09 06:10:23,945 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.6 pTM=0.36 ipTM=0.228 tol=2.46
2024-12-09 06:11:04,601 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.4 pTM=0.361 ipTM=0.229 tol=3.26
2024-12-09 06:11:45,258 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.4 pTM=0.363 ipTM=0.236 tol=4.95
2024-12-09 06:12:25,922 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.4 pTM=0.36 ipTM=0.222 tol=2.07
2024-12-09 06:13:06,606 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.6 pTM=0.361 ipTM=0.227 tol=2.92
2024-12-09 06:13:47,275 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.2 pTM=0.362 ipTM=0.228 tol=3.31
2024-12-09 06:14:27,916 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.3 pTM=0.359 ipTM=0.227 tol=3.29
2024-12-09 06:15:08,559 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.5 pTM=0.364 ipTM=0.229 tol=2.3
2024-12-09 06:15:49,211 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.7 pTM=0.365 ipTM=0.227 tol=2.08
2024-12-09 06:15:49,212 alphafold2_multimer_v3_model_1_seed_000 took 1472.2s (30 recycles)
2024-12-09 06:16:31,130 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.8 pTM=0.365 ipTM=0.157
2024-12-09 06:17:11,889 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.4 pTM=0.375 ipTM=0.163 tol=26.3
2024-12-09 06:17:52,643 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.9 pTM=0.378 ipTM=0.174 tol=7.82
2024-12-09 06:18:33,443 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.6 pTM=0.379 ipTM=0.178 tol=7.77
2024-12-09 06:19:14,206 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.8 pTM=0.383 ipTM=0.257 tol=7.93
2024-12-09 06:19:54,957 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.9 pTM=0.386 ipTM=0.272 tol=4.53
2024-12-09 06:20:35,705 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.2 pTM=0.384 ipTM=0.27 tol=3.15
2024-12-09 06:21:16,433 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.2 pTM=0.387 ipTM=0.269 tol=1.87
2024-12-09 06:21:57,137 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.2 pTM=0.387 ipTM=0.266 tol=1.49
2024-12-09 06:22:37,859 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.2 pTM=0.383 ipTM=0.263 tol=1.98
2024-12-09 06:23:18,592 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.1 pTM=0.38 ipTM=0.259 tol=1.86
2024-12-09 06:23:59,338 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.2 pTM=0.382 ipTM=0.263 tol=1.35
2024-12-09 06:24:40,098 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.5 pTM=0.385 ipTM=0.273 tol=1.19
2024-12-09 06:25:20,823 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.2 pTM=0.382 ipTM=0.262 tol=1.71
2024-12-09 06:26:01,537 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.2 pTM=0.383 ipTM=0.265 tol=1.42
2024-12-09 06:26:42,248 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.1 pTM=0.382 ipTM=0.259 tol=1.82
2024-12-09 06:27:22,952 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.2 pTM=0.384 ipTM=0.259 tol=0.909
2024-12-09 06:28:03,660 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.2 pTM=0.385 ipTM=0.265 tol=1.02
2024-12-09 06:28:44,400 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.4 pTM=0.381 ipTM=0.267 tol=1.97
2024-12-09 06:29:25,099 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.2 pTM=0.381 ipTM=0.259 tol=1.63
2024-12-09 06:30:05,816 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.2 pTM=0.378 ipTM=0.265 tol=1.44
2024-12-09 06:30:46,521 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.2 pTM=0.378 ipTM=0.263 tol=1.52
2024-12-09 06:31:27,240 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.4 pTM=0.379 ipTM=0.269 tol=1.7
2024-12-09 06:32:07,946 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.4 pTM=0.382 ipTM=0.268 tol=1.22
2024-12-09 06:32:48,654 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.2 pTM=0.378 ipTM=0.264 tol=1.75
2024-12-09 06:33:29,388 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.2 pTM=0.382 ipTM=0.265 tol=1.12
2024-12-09 06:34:10,094 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.4 pTM=0.379 ipTM=0.263 tol=1.49
2024-12-09 06:34:50,785 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.3 pTM=0.379 ipTM=0.262 tol=1.23
2024-12-09 06:35:31,476 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.2 pTM=0.379 ipTM=0.266 tol=0.983
2024-12-09 06:36:12,165 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.2 pTM=0.38 ipTM=0.267 tol=0.828
2024-12-09 06:36:52,849 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.2 pTM=0.38 ipTM=0.265 tol=0.962
2024-12-09 06:36:52,850 alphafold2_multimer_v3_model_2_seed_000 took 1262.5s (30 recycles)
2024-12-09 06:37:34,926 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.3 pTM=0.343 ipTM=0.142
2024-12-09 06:38:15,784 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.6 pTM=0.37 ipTM=0.169 tol=27.4
2024-12-09 06:38:56,616 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.2 pTM=0.372 ipTM=0.175 tol=10.8
2024-12-09 06:39:37,456 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.3 pTM=0.372 ipTM=0.18 tol=4.12
2024-12-09 06:40:18,289 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.375 ipTM=0.187 tol=3.85
2024-12-09 06:40:59,089 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.4 pTM=0.376 ipTM=0.191 tol=2.1
2024-12-09 06:41:39,891 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.6 pTM=0.378 ipTM=0.186 tol=2
2024-12-09 06:42:20,672 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.5 pTM=0.379 ipTM=0.185 tol=2.32
2024-12-09 06:43:01,465 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.6 pTM=0.382 ipTM=0.183 tol=1.26
2024-12-09 06:43:42,261 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.6 pTM=0.375 ipTM=0.18 tol=1.54
2024-12-09 06:44:23,074 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.1 pTM=0.371 ipTM=0.176 tol=1.43
2024-12-09 06:45:03,892 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.2 pTM=0.37 ipTM=0.182 tol=1.14
2024-12-09 06:45:44,705 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.5 pTM=0.376 ipTM=0.172 tol=1.63
2024-12-09 06:46:25,531 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.3 pTM=0.374 ipTM=0.183 tol=1.37
2024-12-09 06:47:06,341 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.4 pTM=0.375 ipTM=0.174 tol=1.67
2024-12-09 06:47:47,166 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.3 pTM=0.373 ipTM=0.183 tol=1.84
2024-12-09 06:48:27,985 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.3 pTM=0.374 ipTM=0.167 tol=1.61
2024-12-09 06:49:08,806 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.5 pTM=0.375 ipTM=0.174 tol=1.43
2024-12-09 06:49:49,644 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.4 pTM=0.374 ipTM=0.178 tol=1.81
2024-12-09 06:50:30,432 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.2 pTM=0.372 ipTM=0.189 tol=1.6
2024-12-09 06:51:11,217 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.2 pTM=0.37 ipTM=0.177 tol=1.51
2024-12-09 06:51:51,996 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.1 pTM=0.371 ipTM=0.192 tol=1.64
2024-12-09 06:52:32,796 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.3 pTM=0.369 ipTM=0.172 tol=1.87
2024-12-09 06:53:13,587 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.4 pTM=0.372 ipTM=0.186 tol=1.84
2024-12-09 06:53:54,408 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.8 pTM=0.369 ipTM=0.168 tol=2.3
2024-12-09 06:54:35,208 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.2 pTM=0.373 ipTM=0.182 tol=1.69
2024-12-09 06:55:16,029 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.2 pTM=0.37 ipTM=0.172 tol=1.74
2024-12-09 06:55:56,818 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.3 pTM=0.37 ipTM=0.182 tol=1.82
2024-12-09 06:56:37,620 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.2 pTM=0.369 ipTM=0.168 tol=1.89
2024-12-09 06:57:18,431 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.1 pTM=0.369 ipTM=0.18 tol=1.79
2024-12-09 06:57:59,240 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63 pTM=0.369 ipTM=0.165 tol=1.72
2024-12-09 06:57:59,241 alphafold2_multimer_v3_model_3_seed_000 took 1265.2s (30 recycles)
2024-12-09 06:58:41,498 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.3 pTM=0.341 ipTM=0.14
2024-12-09 06:59:22,407 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.8 pTM=0.37 ipTM=0.194 tol=28.7
2024-12-09 07:00:03,267 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62 pTM=0.37 ipTM=0.157 tol=15
2024-12-09 07:00:44,122 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.3 pTM=0.368 ipTM=0.151 tol=8.39
2024-12-09 07:01:24,961 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.5 pTM=0.371 ipTM=0.164 tol=6.01
2024-12-09 07:02:05,804 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.6 pTM=0.373 ipTM=0.151 tol=3.9
2024-12-09 07:02:46,636 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.8 pTM=0.373 ipTM=0.155 tol=2.89
2024-12-09 07:03:27,502 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.9 pTM=0.375 ipTM=0.154 tol=5.88
2024-12-09 07:04:08,308 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.9 pTM=0.375 ipTM=0.155 tol=3.17
2024-12-09 07:04:49,136 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63 pTM=0.372 ipTM=0.153 tol=2.49
2024-12-09 07:05:29,998 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.8 pTM=0.371 ipTM=0.154 tol=2.84
2024-12-09 07:06:10,841 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.8 pTM=0.371 ipTM=0.157 tol=2.76
2024-12-09 07:06:51,704 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63 pTM=0.37 ipTM=0.153 tol=2.69
2024-12-09 07:07:32,558 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.7 pTM=0.367 ipTM=0.156 tol=2.35
2024-12-09 07:08:13,406 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.7 pTM=0.367 ipTM=0.148 tol=3.07
2024-12-09 07:08:54,254 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.6 pTM=0.366 ipTM=0.151 tol=2.8
2024-12-09 07:09:35,105 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.9 pTM=0.371 ipTM=0.147 tol=4.16
2024-12-09 07:10:15,959 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.9 pTM=0.371 ipTM=0.16 tol=4.56
2024-12-09 07:10:56,783 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.8 pTM=0.368 ipTM=0.148 tol=3.3
2024-12-09 07:11:37,625 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.5 pTM=0.367 ipTM=0.148 tol=3.95
2024-12-09 07:12:18,457 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.7 pTM=0.368 ipTM=0.15 tol=2.63
2024-12-09 07:12:59,282 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.5 pTM=0.366 ipTM=0.156 tol=2.29
2024-12-09 07:13:40,130 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.9 pTM=0.369 ipTM=0.15 tol=2.68
2024-12-09 07:14:20,942 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.8 pTM=0.374 ipTM=0.152 tol=3.24
2024-12-09 07:15:01,764 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.6 pTM=0.369 ipTM=0.151 tol=2.36
2024-12-09 07:15:42,601 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.8 pTM=0.372 ipTM=0.16 tol=1.76
2024-12-09 07:16:23,494 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.9 pTM=0.368 ipTM=0.152 tol=2.58
2024-12-09 07:17:04,360 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63 pTM=0.368 ipTM=0.152 tol=2.17
2024-12-09 07:17:45,205 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.9 pTM=0.37 ipTM=0.157 tol=2.68
2024-12-09 07:18:26,063 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.8 pTM=0.37 ipTM=0.165 tol=2.76
2024-12-09 07:19:06,913 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.7 pTM=0.368 ipTM=0.151 tol=2.77
2024-12-09 07:19:06,914 alphafold2_multimer_v3_model_4_seed_000 took 1266.5s (30 recycles)
2024-12-09 07:19:48,967 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.9 pTM=0.359 ipTM=0.146
2024-12-09 07:20:29,880 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.5 pTM=0.367 ipTM=0.229 tol=25.9
2024-12-09 07:21:10,725 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.9 pTM=0.371 ipTM=0.198 tol=9.66
2024-12-09 07:21:51,517 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.3 pTM=0.372 ipTM=0.19 tol=6.57
2024-12-09 07:22:32,318 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.3 pTM=0.375 ipTM=0.185 tol=4.73
2024-12-09 07:23:13,132 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.2 pTM=0.378 ipTM=0.187 tol=3.04
2024-12-09 07:23:53,927 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.1 pTM=0.376 ipTM=0.185 tol=3.31
2024-12-09 07:24:34,731 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.2 pTM=0.381 ipTM=0.189 tol=3.36
2024-12-09 07:25:15,526 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.2 pTM=0.379 ipTM=0.185 tol=3.71
2024-12-09 07:25:56,324 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.3 pTM=0.375 ipTM=0.185 tol=2.1
2024-12-09 07:26:37,132 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.1 pTM=0.375 ipTM=0.187 tol=2.13
2024-12-09 07:27:17,942 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.1 pTM=0.372 ipTM=0.183 tol=2.09
2024-12-09 07:27:58,763 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.4 pTM=0.379 ipTM=0.185 tol=1.78
2024-12-09 07:28:39,580 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.2 pTM=0.375 ipTM=0.185 tol=2.21
2024-12-09 07:29:20,421 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.3 pTM=0.379 ipTM=0.186 tol=1.86
2024-12-09 07:30:01,224 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.1 pTM=0.37 ipTM=0.181 tol=2.42
2024-12-09 07:30:42,021 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.2 pTM=0.379 ipTM=0.188 tol=2.62
2024-12-09 07:31:22,812 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.2 pTM=0.374 ipTM=0.184 tol=3.62
2024-12-09 07:32:03,604 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.2 pTM=0.377 ipTM=0.189 tol=3.44
2024-12-09 07:32:44,407 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.1 pTM=0.374 ipTM=0.191 tol=3.32
2024-12-09 07:33:25,228 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.1 pTM=0.374 ipTM=0.192 tol=1.41
2024-12-09 07:34:06,055 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.8 pTM=0.37 ipTM=0.19 tol=1.63
2024-12-09 07:34:46,899 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.1 pTM=0.372 ipTM=0.193 tol=2.19
2024-12-09 07:35:27,749 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.1 pTM=0.375 ipTM=0.193 tol=1.61
2024-12-09 07:36:08,596 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.8 pTM=0.371 ipTM=0.197 tol=1.82
2024-12-09 07:36:49,430 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.2 pTM=0.372 ipTM=0.191 tol=4.67
2024-12-09 07:37:30,352 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.3 pTM=0.372 ipTM=0.194 tol=2.66
2024-12-09 07:38:11,194 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.3 pTM=0.37 ipTM=0.19 tol=2.53
2024-12-09 07:38:52,001 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.2 pTM=0.371 ipTM=0.191 tol=4.04
2024-12-09 07:39:32,815 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.2 pTM=0.373 ipTM=0.192 tol=5.1
2024-12-09 07:40:13,643 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.9 pTM=0.369 ipTM=0.189 tol=2.81
2024-12-09 07:40:13,644 alphafold2_multimer_v3_model_5_seed_000 took 1265.6s (30 recycles)
2024-12-09 07:40:14,805 reranking models by 'multimer' metric
2024-12-09 07:40:16,079 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 07:42:39,907 Relaxation took 145.1s
2024-12-09 07:42:39,907 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.2 pTM=0.38 ipTM=0.265
2024-12-09 07:44:42,300 Relaxation took 122.4s
2024-12-09 07:44:42,300 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.7 pTM=0.365 ipTM=0.227
2024-12-09 07:48:09,736 Relaxation took 207.4s
2024-12-09 07:48:09,736 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.9 pTM=0.369 ipTM=0.189
2024-12-09 07:50:40,187 Relaxation took 150.5s
2024-12-09 07:50:40,187 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63 pTM=0.369 ipTM=0.165
2024-12-09 07:53:35,999 Relaxation took 175.8s
2024-12-09 07:53:35,999 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.7 pTM=0.368 ipTM=0.151
2024-12-09 07:53:38,962 Done