2024-12-09 05:55:37,401 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 05:55:37,738 Running on GPU
2024-12-09 05:55:40,555 Found 6 citations for tools or databases
2024-12-09 05:55:40,555 Query 1/1: TRIM71_ZNF346 (length 1162)
2024-12-09 05:55:40,914 Sleeping for 9s. Reason: PENDING
2024-12-09 05:55:50,179 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:55:59,441 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:56:08,705 Sleeping for 9s. Reason: RUNNING
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2024-12-09 05:56:33,477 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:56:41,741 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:56:50,999 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:56:56,262 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:57:05,534 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:57:14,794 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:57:20,051 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:57:27,308 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:57:32,562 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:57:42,820 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:57:53,078 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:57:59,337 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:58:04,592 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:58:14,849 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:58:22,108 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:58:27,365 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:58:38,165 Sleeping for 7s. Reason: PENDING
2024-12-09 05:58:45,425 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:58:50,689 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:58:56,949 Sleeping for 8s. Reason: RUNNING
2024-12-09 05:59:05,208 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:59:12,466 Sleeping for 5s. Reason: RUNNING
2024-12-09 05:59:17,719 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:59:24,976 Sleeping for 6s. Reason: RUNNING
2024-12-09 05:59:31,238 Sleeping for 9s. Reason: RUNNING
2024-12-09 05:59:40,499 Sleeping for 10s. Reason: RUNNING
2024-12-09 05:59:50,761 Sleeping for 7s. Reason: RUNNING
2024-12-09 05:59:58,014 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:00:06,269 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:00:21,037 Setting max_seq=508, max_extra_seq=2048
2024-12-09 06:04:08,876 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.2 pTM=0.393 ipTM=0.157
2024-12-09 06:04:43,689 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.1 pTM=0.386 ipTM=0.182 tol=16.1
2024-12-09 06:05:18,688 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65 pTM=0.38 ipTM=0.183 tol=5.43
2024-12-09 06:05:53,705 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.1 pTM=0.382 ipTM=0.178 tol=4.49
2024-12-09 06:06:28,757 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65 pTM=0.378 ipTM=0.182 tol=3.56
2024-12-09 06:07:03,919 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.9 pTM=0.377 ipTM=0.18 tol=2.77
2024-12-09 06:07:39,028 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65 pTM=0.376 ipTM=0.181 tol=2.49
2024-12-09 06:08:14,138 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.3 pTM=0.375 ipTM=0.183 tol=2.59
2024-12-09 06:08:49,256 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.2 pTM=0.372 ipTM=0.182 tol=1.96
2024-12-09 06:09:24,373 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=65.2 pTM=0.373 ipTM=0.182 tol=1.36
2024-12-09 06:09:59,483 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.8 pTM=0.37 ipTM=0.177 tol=1.56
2024-12-09 06:10:34,604 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.6 pTM=0.37 ipTM=0.182 tol=2.07
2024-12-09 06:11:09,718 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.6 pTM=0.371 ipTM=0.184 tol=2.08
2024-12-09 06:11:44,845 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.6 pTM=0.371 ipTM=0.185 tol=3.41
2024-12-09 06:12:19,966 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.6 pTM=0.37 ipTM=0.183 tol=2.15
2024-12-09 06:12:55,103 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.8 pTM=0.369 ipTM=0.185 tol=2.4
2024-12-09 06:13:30,243 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.8 pTM=0.369 ipTM=0.186 tol=2.14
2024-12-09 06:14:05,377 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.6 pTM=0.366 ipTM=0.181 tol=2.51
2024-12-09 06:14:40,528 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.8 pTM=0.367 ipTM=0.188 tol=2.35
2024-12-09 06:15:15,647 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.6 pTM=0.371 ipTM=0.182 tol=3.07
2024-12-09 06:15:50,759 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.5 pTM=0.369 ipTM=0.182 tol=2.89
2024-12-09 06:16:25,911 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.9 pTM=0.37 ipTM=0.183 tol=2.31
2024-12-09 06:17:01,064 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.8 pTM=0.366 ipTM=0.187 tol=1.95
2024-12-09 06:17:36,255 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.9 pTM=0.367 ipTM=0.182 tol=1.87
2024-12-09 06:18:11,410 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=65 pTM=0.371 ipTM=0.185 tol=3.31
2024-12-09 06:18:46,576 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=65.1 pTM=0.369 ipTM=0.182 tol=3.27
2024-12-09 06:19:21,719 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.2 pTM=0.368 ipTM=0.182 tol=1.8
2024-12-09 06:19:56,861 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=65 pTM=0.369 ipTM=0.181 tol=3.85
2024-12-09 06:20:32,011 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.9 pTM=0.372 ipTM=0.184 tol=3.62
2024-12-09 06:21:07,157 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.8 pTM=0.369 ipTM=0.183 tol=2.07
2024-12-09 06:21:42,287 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.8 pTM=0.375 ipTM=0.184 tol=2.46
2024-12-09 06:21:42,288 alphafold2_multimer_v3_model_1_seed_000 took 1274.6s (30 recycles)
2024-12-09 06:22:18,523 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.7 pTM=0.396 ipTM=0.178
2024-12-09 06:22:53,701 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.4 pTM=0.398 ipTM=0.192 tol=20.7
2024-12-09 06:23:28,920 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.2 pTM=0.403 ipTM=0.181 tol=5.59
2024-12-09 06:24:04,173 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.8 pTM=0.403 ipTM=0.177 tol=3.54
2024-12-09 06:24:39,412 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.1 pTM=0.408 ipTM=0.179 tol=2.46
2024-12-09 06:25:14,640 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67 pTM=0.408 ipTM=0.179 tol=2.63
2024-12-09 06:25:49,882 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.1 pTM=0.409 ipTM=0.179 tol=1.95
2024-12-09 06:26:25,112 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.4 pTM=0.41 ipTM=0.181 tol=1.63
2024-12-09 06:27:00,363 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.3 pTM=0.409 ipTM=0.183 tol=2.16
2024-12-09 06:27:35,601 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.2 pTM=0.409 ipTM=0.18 tol=3.03
2024-12-09 06:28:10,826 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.3 pTM=0.407 ipTM=0.178 tol=3.1
2024-12-09 06:28:46,069 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.1 pTM=0.407 ipTM=0.18 tol=2.19
2024-12-09 06:29:21,301 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.1 pTM=0.408 ipTM=0.18 tol=2.6
2024-12-09 06:29:56,547 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.1 pTM=0.409 ipTM=0.182 tol=1.74
2024-12-09 06:30:31,787 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67 pTM=0.41 ipTM=0.181 tol=4.04
2024-12-09 06:31:07,026 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.9 pTM=0.409 ipTM=0.185 tol=3.06
2024-12-09 06:31:42,257 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.9 pTM=0.407 ipTM=0.18 tol=2.42
2024-12-09 06:32:17,482 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.7 pTM=0.402 ipTM=0.181 tol=1.93
2024-12-09 06:32:52,722 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.8 pTM=0.406 ipTM=0.184 tol=2.07
2024-12-09 06:33:27,974 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.7 pTM=0.408 ipTM=0.187 tol=1.58
2024-12-09 06:34:03,192 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.7 pTM=0.407 ipTM=0.184 tol=3.65
2024-12-09 06:34:38,408 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.9 pTM=0.408 ipTM=0.182 tol=2.63
2024-12-09 06:35:13,618 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.9 pTM=0.406 ipTM=0.182 tol=1.49
2024-12-09 06:35:48,848 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.8 pTM=0.407 ipTM=0.182 tol=1.76
2024-12-09 06:36:24,055 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.8 pTM=0.408 ipTM=0.182 tol=2.86
2024-12-09 06:36:59,257 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.9 pTM=0.409 ipTM=0.183 tol=2.1
2024-12-09 06:37:34,488 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.1 pTM=0.406 ipTM=0.183 tol=2.6
2024-12-09 06:38:09,688 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.9 pTM=0.407 ipTM=0.18 tol=2.25
2024-12-09 06:38:44,912 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.412 ipTM=0.18 tol=1.54
2024-12-09 06:39:20,139 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.9 pTM=0.41 ipTM=0.18 tol=2.15
2024-12-09 06:39:55,371 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.8 pTM=0.413 ipTM=0.181 tol=2.82
2024-12-09 06:39:55,372 alphafold2_multimer_v3_model_2_seed_000 took 1092.0s (30 recycles)
2024-12-09 06:40:31,661 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63 pTM=0.403 ipTM=0.177
2024-12-09 06:41:06,925 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.1 pTM=0.403 ipTM=0.211 tol=28.8
2024-12-09 06:41:42,184 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.8 pTM=0.399 ipTM=0.194 tol=6.64
2024-12-09 06:42:17,416 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.8 pTM=0.405 ipTM=0.217 tol=4.24
2024-12-09 06:42:52,657 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.401 ipTM=0.193 tol=3.22
2024-12-09 06:43:27,890 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.7 pTM=0.404 ipTM=0.213 tol=3.01
2024-12-09 06:44:03,119 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.7 pTM=0.41 ipTM=0.212 tol=3
2024-12-09 06:44:38,352 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.8 pTM=0.415 ipTM=0.223 tol=2.21
2024-12-09 06:45:13,605 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64 pTM=0.417 ipTM=0.219 tol=2.35
2024-12-09 06:45:48,843 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64 pTM=0.414 ipTM=0.216 tol=1.86
2024-12-09 06:46:24,083 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.8 pTM=0.408 ipTM=0.215 tol=1.57
2024-12-09 06:46:59,313 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.8 pTM=0.406 ipTM=0.219 tol=2.72
2024-12-09 06:47:34,530 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.7 pTM=0.405 ipTM=0.216 tol=2.71
2024-12-09 06:48:09,775 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.1 pTM=0.409 ipTM=0.218 tol=1.61
2024-12-09 06:48:45,006 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.8 pTM=0.404 ipTM=0.214 tol=2.31
2024-12-09 06:49:20,228 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.8 pTM=0.405 ipTM=0.218 tol=3.11
2024-12-09 06:49:55,447 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.7 pTM=0.401 ipTM=0.207 tol=2.08
2024-12-09 06:50:30,668 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.8 pTM=0.399 ipTM=0.209 tol=1.96
2024-12-09 06:51:05,893 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.8 pTM=0.4 ipTM=0.21 tol=2.31
2024-12-09 06:51:41,085 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.7 pTM=0.402 ipTM=0.216 tol=2.3
2024-12-09 06:52:16,291 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.5 pTM=0.402 ipTM=0.21 tol=2.26
2024-12-09 06:52:51,499 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.7 pTM=0.403 ipTM=0.215 tol=2.65
2024-12-09 06:53:26,751 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.6 pTM=0.399 ipTM=0.211 tol=2.16
2024-12-09 06:54:01,969 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.8 pTM=0.405 ipTM=0.22 tol=2.8
2024-12-09 06:54:37,209 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.8 pTM=0.405 ipTM=0.207 tol=1.73
2024-12-09 06:55:12,430 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.8 pTM=0.405 ipTM=0.211 tol=1.75
2024-12-09 06:55:47,665 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.7 pTM=0.399 ipTM=0.199 tol=2.67
2024-12-09 06:56:22,879 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64 pTM=0.405 ipTM=0.205 tol=1.81
2024-12-09 06:56:58,111 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.8 pTM=0.404 ipTM=0.202 tol=1.46
2024-12-09 06:57:33,316 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.8 pTM=0.404 ipTM=0.215 tol=1.84
2024-12-09 06:58:08,559 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.6 pTM=0.402 ipTM=0.201 tol=2.77
2024-12-09 06:58:08,560 alphafold2_multimer_v3_model_3_seed_000 took 1092.1s (30 recycles)
2024-12-09 06:58:44,989 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.3 pTM=0.4 ipTM=0.193
2024-12-09 06:59:20,340 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.9 pTM=0.386 ipTM=0.186 tol=27.2
2024-12-09 06:59:55,638 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.4 pTM=0.385 ipTM=0.176 tol=7.38
2024-12-09 07:00:30,925 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.5 pTM=0.39 ipTM=0.163 tol=5.42
2024-12-09 07:01:06,202 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.2 pTM=0.392 ipTM=0.177 tol=6.6
2024-12-09 07:01:41,487 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.2 pTM=0.393 ipTM=0.168 tol=5.84
2024-12-09 07:02:16,775 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.4 pTM=0.395 ipTM=0.166 tol=2.65
2024-12-09 07:02:52,055 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.4 pTM=0.396 ipTM=0.175 tol=2.05
2024-12-09 07:03:27,363 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.4 pTM=0.394 ipTM=0.171 tol=1.55
2024-12-09 07:04:02,643 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.6 pTM=0.395 ipTM=0.164 tol=2.05
2024-12-09 07:04:37,922 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.5 pTM=0.393 ipTM=0.164 tol=1.19
2024-12-09 07:05:13,205 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.6 pTM=0.394 ipTM=0.162 tol=2.61
2024-12-09 07:05:48,507 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.1 pTM=0.392 ipTM=0.171 tol=3.42
2024-12-09 07:06:23,802 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.3 pTM=0.391 ipTM=0.172 tol=2.4
2024-12-09 07:06:59,103 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.5 pTM=0.394 ipTM=0.167 tol=1.94
2024-12-09 07:07:34,376 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.7 pTM=0.392 ipTM=0.157 tol=3.16
2024-12-09 07:08:09,646 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.7 pTM=0.394 ipTM=0.163 tol=3.16
2024-12-09 07:08:44,926 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.6 pTM=0.389 ipTM=0.162 tol=3.1
2024-12-09 07:09:20,205 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.8 pTM=0.396 ipTM=0.169 tol=3.64
2024-12-09 07:09:55,475 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.6 pTM=0.398 ipTM=0.168 tol=2.58
2024-12-09 07:10:30,725 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.6 pTM=0.399 ipTM=0.161 tol=4.06
2024-12-09 07:11:05,985 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.8 pTM=0.403 ipTM=0.172 tol=3.16
2024-12-09 07:11:41,263 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.6 pTM=0.397 ipTM=0.167 tol=1.94
2024-12-09 07:12:16,524 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.6 pTM=0.399 ipTM=0.163 tol=3.15
2024-12-09 07:12:51,779 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.5 pTM=0.402 ipTM=0.173 tol=4.02
2024-12-09 07:13:27,042 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.7 pTM=0.398 ipTM=0.162 tol=2.75
2024-12-09 07:14:02,313 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.7 pTM=0.399 ipTM=0.169 tol=2.16
2024-12-09 07:14:37,570 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.8 pTM=0.397 ipTM=0.155 tol=3.42
2024-12-09 07:15:12,832 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.8 pTM=0.404 ipTM=0.167 tol=3.89
2024-12-09 07:15:48,107 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.6 pTM=0.398 ipTM=0.162 tol=3.62
2024-12-09 07:16:23,423 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.8 pTM=0.406 ipTM=0.159 tol=4.2
2024-12-09 07:16:23,424 alphafold2_multimer_v3_model_4_seed_000 took 1093.8s (30 recycles)
2024-12-09 07:16:59,774 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.9 pTM=0.399 ipTM=0.169
2024-12-09 07:17:35,085 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.2 pTM=0.393 ipTM=0.169 tol=9.52
2024-12-09 07:18:10,375 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.9 pTM=0.39 ipTM=0.163 tol=5.83
2024-12-09 07:18:45,662 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.8 pTM=0.396 ipTM=0.164 tol=4.46
2024-12-09 07:19:20,934 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.2 pTM=0.396 ipTM=0.171 tol=5.43
2024-12-09 07:19:56,205 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.2 pTM=0.396 ipTM=0.175 tol=5.68
2024-12-09 07:20:31,492 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.3 pTM=0.396 ipTM=0.177 tol=4.09
2024-12-09 07:21:06,788 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.8 pTM=0.394 ipTM=0.168 tol=4.73
2024-12-09 07:21:42,081 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.1 pTM=0.397 ipTM=0.166 tol=3.28
2024-12-09 07:22:17,341 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.1 pTM=0.391 ipTM=0.159 tol=2.57
2024-12-09 07:22:52,584 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.1 pTM=0.389 ipTM=0.157 tol=4.16
2024-12-09 07:23:27,831 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64 pTM=0.388 ipTM=0.159 tol=1.95
2024-12-09 07:24:03,078 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.8 pTM=0.391 ipTM=0.161 tol=3.75
2024-12-09 07:24:38,346 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.2 pTM=0.392 ipTM=0.163 tol=4.46
2024-12-09 07:25:13,611 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.1 pTM=0.39 ipTM=0.16 tol=2.01
2024-12-09 07:25:48,878 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.2 pTM=0.391 ipTM=0.16 tol=2.98
2024-12-09 07:26:24,137 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.4 pTM=0.384 ipTM=0.161 tol=2.07
2024-12-09 07:26:59,400 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.6 pTM=0.386 ipTM=0.16 tol=2.99
2024-12-09 07:27:34,661 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.8 pTM=0.388 ipTM=0.16 tol=1.43
2024-12-09 07:28:09,933 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.5 pTM=0.388 ipTM=0.162 tol=2.65
2024-12-09 07:28:45,179 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.4 pTM=0.385 ipTM=0.157 tol=2.3
2024-12-09 07:29:20,463 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.6 pTM=0.387 ipTM=0.159 tol=1.81
2024-12-09 07:29:55,731 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.6 pTM=0.382 ipTM=0.157 tol=1.42
2024-12-09 07:30:31,003 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.6 pTM=0.385 ipTM=0.155 tol=0.992
2024-12-09 07:31:06,271 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.4 pTM=0.385 ipTM=0.153 tol=1.58
2024-12-09 07:31:41,532 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.7 pTM=0.385 ipTM=0.155 tol=2.19
2024-12-09 07:32:16,797 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.7 pTM=0.385 ipTM=0.154 tol=2.68
2024-12-09 07:32:52,063 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.7 pTM=0.387 ipTM=0.153 tol=3.27
2024-12-09 07:33:27,332 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.6 pTM=0.387 ipTM=0.159 tol=2.98
2024-12-09 07:34:02,612 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.5 pTM=0.383 ipTM=0.157 tol=1.89
2024-12-09 07:34:37,902 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.3 pTM=0.388 ipTM=0.158 tol=2.61
2024-12-09 07:34:37,903 alphafold2_multimer_v3_model_5_seed_000 took 1093.4s (30 recycles)
2024-12-09 07:34:38,948 reranking models by 'multimer' metric
2024-12-09 07:34:42,218 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 07:38:38,141 Relaxation took 239.2s
2024-12-09 07:38:38,141 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.6 pTM=0.402 ipTM=0.201
2024-12-09 07:41:37,778 Relaxation took 179.6s
2024-12-09 07:41:37,779 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.8 pTM=0.413 ipTM=0.181
2024-12-09 07:43:40,073 Relaxation took 122.3s
2024-12-09 07:43:40,073 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.8 pTM=0.375 ipTM=0.184
2024-12-09 07:47:04,758 Relaxation took 204.7s
2024-12-09 07:47:04,758 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.8 pTM=0.406 ipTM=0.159
2024-12-09 07:48:46,572 Relaxation took 101.8s
2024-12-09 07:48:46,572 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.3 pTM=0.388 ipTM=0.158
2024-12-09 07:48:49,499 Done