2024-12-09 05:58:15,676 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 05:58:15,970 Running on GPU
2024-12-09 05:58:18,089 Found 6 citations for tools or databases
2024-12-09 05:58:18,089 Query 1/1: TRIM71_ZNF467 (length 1463)
2024-12-09 05:58:18,380 Sleeping for 8s. Reason: PENDING
2024-12-09 05:58:26,641 Sleeping for 8s. Reason: RUNNING
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2024-12-09 06:01:42,010 Sleeping for 9s. Reason: RUNNING
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2024-12-09 06:01:58,529 Sleeping for 5s. Reason: RUNNING
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2024-12-09 06:02:19,308 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:02:26,580 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:02:31,833 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:02:38,912 Sleeping for 7s. Reason: PENDING
2024-12-09 06:02:46,171 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:02:53,429 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:02:58,687 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:03:05,939 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:03:12,196 Sleeping for 6s. Reason: RUNNING
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2024-12-09 06:03:40,224 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:03:47,479 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:03:57,743 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:04:07,002 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:04:14,260 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:04:24,527 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:04:33,790 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:04:41,043 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:04:51,307 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:04:57,560 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:05:07,819 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:05:13,071 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:05:23,813 Setting max_seq=508, max_extra_seq=2048
2024-12-09 06:09:11,776 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.2 pTM=0.351 ipTM=0.224
2024-12-09 06:10:12,885 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.9 pTM=0.351 ipTM=0.2 tol=10.1
2024-12-09 06:11:14,172 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57 pTM=0.35 ipTM=0.288 tol=7.1
2024-12-09 06:12:15,501 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.8 pTM=0.344 ipTM=0.208 tol=5.28
2024-12-09 06:13:16,852 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.7 pTM=0.341 ipTM=0.214 tol=3.08
2024-12-09 06:14:18,180 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.6 pTM=0.341 ipTM=0.209 tol=2.2
2024-12-09 06:15:19,480 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.7 pTM=0.342 ipTM=0.215 tol=1.98
2024-12-09 06:16:20,820 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.6 pTM=0.341 ipTM=0.197 tol=2.72
2024-12-09 06:17:22,145 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.5 pTM=0.342 ipTM=0.2 tol=3.04
2024-12-09 06:18:23,459 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.4 pTM=0.34 ipTM=0.194 tol=2.91
2024-12-09 06:19:24,693 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.4 pTM=0.339 ipTM=0.2 tol=2.87
2024-12-09 06:20:25,974 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.3 pTM=0.34 ipTM=0.196 tol=3.24
2024-12-09 06:21:27,294 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.4 pTM=0.342 ipTM=0.198 tol=2.65
2024-12-09 06:22:28,679 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.3 pTM=0.341 ipTM=0.196 tol=2.36
2024-12-09 06:23:30,038 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.3 pTM=0.344 ipTM=0.199 tol=1.46
2024-12-09 06:24:31,430 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.4 pTM=0.342 ipTM=0.2 tol=1.6
2024-12-09 06:25:32,840 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.5 pTM=0.343 ipTM=0.2 tol=1.29
2024-12-09 06:26:34,245 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.6 pTM=0.342 ipTM=0.2 tol=1.9
2024-12-09 06:27:35,612 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.5 pTM=0.343 ipTM=0.2 tol=1.41
2024-12-09 06:28:36,982 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.6 pTM=0.344 ipTM=0.201 tol=1.64
2024-12-09 06:29:38,355 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56 pTM=0.342 ipTM=0.2 tol=1.54
2024-12-09 06:30:39,722 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.3 pTM=0.342 ipTM=0.202 tol=1.06
2024-12-09 06:31:41,067 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.3 pTM=0.34 ipTM=0.2 tol=1.11
2024-12-09 06:32:42,429 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.2 pTM=0.343 ipTM=0.201 tol=1.87
2024-12-09 06:33:43,776 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.4 pTM=0.342 ipTM=0.199 tol=1.42
2024-12-09 06:34:45,099 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.3 pTM=0.344 ipTM=0.203 tol=1.92
2024-12-09 06:35:46,419 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.8 pTM=0.34 ipTM=0.199 tol=1.79
2024-12-09 06:36:47,728 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.6 pTM=0.342 ipTM=0.201 tol=1.36
2024-12-09 06:37:49,041 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.7 pTM=0.341 ipTM=0.197 tol=1.32
2024-12-09 06:38:50,359 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.4 pTM=0.344 ipTM=0.203 tol=1.01
2024-12-09 06:39:51,748 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.6 pTM=0.341 ipTM=0.198 tol=1.91
2024-12-09 06:39:51,750 alphafold2_multimer_v3_model_1_seed_000 took 2063.1s (30 recycles)
2024-12-09 06:40:54,465 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.7 pTM=0.35 ipTM=0.205
2024-12-09 06:41:55,931 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.5 pTM=0.358 ipTM=0.193 tol=25.3
2024-12-09 06:42:57,401 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.4 pTM=0.363 ipTM=0.19 tol=7.99
2024-12-09 06:43:58,882 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.3 pTM=0.362 ipTM=0.195 tol=5.34
2024-12-09 06:45:00,348 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.5 pTM=0.361 ipTM=0.192 tol=3.21
2024-12-09 06:46:01,819 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.6 pTM=0.362 ipTM=0.193 tol=3.06
2024-12-09 06:47:03,255 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.5 pTM=0.365 ipTM=0.192 tol=3.41
2024-12-09 06:48:04,712 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.6 pTM=0.365 ipTM=0.196 tol=2.35
2024-12-09 06:49:06,167 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.5 pTM=0.365 ipTM=0.19 tol=2.51
2024-12-09 06:50:07,628 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.6 pTM=0.363 ipTM=0.194 tol=1.87
2024-12-09 06:51:09,091 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.8 pTM=0.36 ipTM=0.189 tol=1.99
2024-12-09 06:52:10,550 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.7 pTM=0.362 ipTM=0.204 tol=1.94
2024-12-09 06:53:11,933 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.7 pTM=0.362 ipTM=0.188 tol=2.59
2024-12-09 06:54:13,364 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.7 pTM=0.362 ipTM=0.201 tol=2.53
2024-12-09 06:55:14,809 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.8 pTM=0.363 ipTM=0.193 tol=2.14
2024-12-09 06:56:16,305 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.8 pTM=0.36 ipTM=0.201 tol=2.01
2024-12-09 06:57:17,785 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.8 pTM=0.362 ipTM=0.189 tol=2.27
2024-12-09 06:58:19,254 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.7 pTM=0.359 ipTM=0.194 tol=2.33
2024-12-09 06:59:20,734 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.7 pTM=0.36 ipTM=0.187 tol=5.19
2024-12-09 07:00:22,199 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.7 pTM=0.363 ipTM=0.195 tol=5.14
2024-12-09 07:01:23,627 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.7 pTM=0.361 ipTM=0.19 tol=2.7
2024-12-09 07:02:25,065 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.8 pTM=0.363 ipTM=0.197 tol=2.49
2024-12-09 07:03:26,492 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.8 pTM=0.36 ipTM=0.191 tol=2.67
2024-12-09 07:04:27,898 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.8 pTM=0.361 ipTM=0.202 tol=2.44
2024-12-09 07:05:29,288 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.6 pTM=0.362 ipTM=0.191 tol=2.23
2024-12-09 07:06:30,678 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.7 pTM=0.362 ipTM=0.202 tol=3.04
2024-12-09 07:07:32,131 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59 pTM=0.36 ipTM=0.193 tol=3.88
2024-12-09 07:08:33,575 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.2 pTM=0.363 ipTM=0.203 tol=3.47
2024-12-09 07:09:35,036 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.2 pTM=0.362 ipTM=0.196 tol=2.85
2024-12-09 07:10:36,502 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.2 pTM=0.364 ipTM=0.205 tol=2.18
2024-12-09 07:11:37,965 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.3 pTM=0.363 ipTM=0.193 tol=2.73
2024-12-09 07:11:37,967 alphafold2_multimer_v3_model_2_seed_000 took 1904.9s (30 recycles)
2024-12-09 07:12:40,942 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.2 pTM=0.354 ipTM=0.305
2024-12-09 07:13:42,586 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.7 pTM=0.356 ipTM=0.208 tol=25
2024-12-09 07:14:44,213 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.3 pTM=0.363 ipTM=0.229 tol=10.4
2024-12-09 07:15:45,870 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.5 pTM=0.36 ipTM=0.213 tol=4.78
2024-12-09 07:16:47,504 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.9 pTM=0.362 ipTM=0.21 tol=4.68
2024-12-09 07:17:49,139 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.8 pTM=0.362 ipTM=0.218 tol=3.49
2024-12-09 07:18:50,749 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56 pTM=0.363 ipTM=0.229 tol=3.49
2024-12-09 07:19:52,374 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56 pTM=0.361 ipTM=0.209 tol=3.52
2024-12-09 07:20:54,024 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56 pTM=0.363 ipTM=0.232 tol=4.29
2024-12-09 07:21:55,705 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56 pTM=0.358 ipTM=0.207 tol=4.7
2024-12-09 07:22:57,338 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56 pTM=0.357 ipTM=0.218 tol=6.21
2024-12-09 07:23:58,959 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.9 pTM=0.358 ipTM=0.223 tol=3.08
2024-12-09 07:25:00,574 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.1 pTM=0.357 ipTM=0.2 tol=3.12
2024-12-09 07:26:02,198 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.2 pTM=0.363 ipTM=0.251 tol=2.78
2024-12-09 07:27:03,832 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.2 pTM=0.359 ipTM=0.212 tol=2.51
2024-12-09 07:28:05,468 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.9 pTM=0.358 ipTM=0.226 tol=2.18
2024-12-09 07:29:07,109 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56 pTM=0.358 ipTM=0.206 tol=2.39
2024-12-09 07:30:08,744 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.8 pTM=0.357 ipTM=0.216 tol=2.09
2024-12-09 07:31:10,380 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56 pTM=0.357 ipTM=0.209 tol=1.68
2024-12-09 07:32:11,995 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.9 pTM=0.359 ipTM=0.222 tol=2.36
2024-12-09 07:33:13,591 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.9 pTM=0.358 ipTM=0.208 tol=2.42
2024-12-09 07:34:15,204 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.8 pTM=0.356 ipTM=0.224 tol=2.25
2024-12-09 07:35:16,804 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56 pTM=0.356 ipTM=0.208 tol=2.32
2024-12-09 07:36:18,400 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.8 pTM=0.353 ipTM=0.22 tol=2.29
2024-12-09 07:37:20,009 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56 pTM=0.354 ipTM=0.21 tol=1.88
2024-12-09 07:38:21,627 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.8 pTM=0.353 ipTM=0.211 tol=2.47
2024-12-09 07:39:23,244 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.2 pTM=0.354 ipTM=0.21 tol=1.61
2024-12-09 07:40:24,849 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56 pTM=0.355 ipTM=0.218 tol=1.63
2024-12-09 07:41:26,455 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56 pTM=0.357 ipTM=0.21 tol=1.86
2024-12-09 07:42:28,059 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56 pTM=0.355 ipTM=0.213 tol=1.94
2024-12-09 07:43:29,680 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56 pTM=0.355 ipTM=0.206 tol=2.16
2024-12-09 07:43:29,682 alphafold2_multimer_v3_model_3_seed_000 took 1910.4s (30 recycles)
2024-12-09 07:44:32,915 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.4 pTM=0.331 ipTM=0.185
2024-12-09 07:45:34,568 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.1 pTM=0.348 ipTM=0.196 tol=25
2024-12-09 07:46:36,241 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.5 pTM=0.353 ipTM=0.199 tol=7.91
2024-12-09 07:47:37,812 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.9 pTM=0.365 ipTM=0.281 tol=7.2
2024-12-09 07:48:39,367 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.4 pTM=0.369 ipTM=0.307 tol=3.71
2024-12-09 07:49:40,896 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.5 pTM=0.374 ipTM=0.325 tol=3.65
2024-12-09 07:50:42,466 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.9 pTM=0.375 ipTM=0.332 tol=2.41
2024-12-09 07:51:43,950 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.5 pTM=0.386 ipTM=0.356 tol=2.86
2024-12-09 07:52:45,430 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.4 pTM=0.386 ipTM=0.358 tol=1.94
2024-12-09 07:53:46,967 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.4 pTM=0.386 ipTM=0.355 tol=1.39
2024-12-09 07:54:48,484 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59.4 pTM=0.386 ipTM=0.358 tol=1.56
2024-12-09 07:55:49,994 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=59.6 pTM=0.389 ipTM=0.367 tol=3.3
2024-12-09 07:56:51,526 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.8 pTM=0.392 ipTM=0.375 tol=1.43
2024-12-09 07:57:53,010 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.7 pTM=0.393 ipTM=0.377 tol=3.14
2024-12-09 07:58:54,545 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.7 pTM=0.392 ipTM=0.374 tol=1.43
2024-12-09 07:59:56,083 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.6 pTM=0.389 ipTM=0.373 tol=1.98
2024-12-09 08:00:57,619 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.8 pTM=0.393 ipTM=0.383 tol=2.15
2024-12-09 08:01:59,132 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59.7 pTM=0.391 ipTM=0.374 tol=3.22
2024-12-09 08:03:00,639 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=59.7 pTM=0.39 ipTM=0.371 tol=3.03
2024-12-09 08:04:02,158 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.8 pTM=0.393 ipTM=0.377 tol=1.59
2024-12-09 08:05:03,683 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59.5 pTM=0.391 ipTM=0.372 tol=1.15
2024-12-09 08:06:05,227 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.6 pTM=0.392 ipTM=0.376 tol=1.42
2024-12-09 08:07:06,778 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.6 pTM=0.39 ipTM=0.374 tol=1.27
2024-12-09 08:08:08,345 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.5 pTM=0.391 ipTM=0.375 tol=3.16
2024-12-09 08:09:09,937 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.8 pTM=0.394 ipTM=0.379 tol=3.01
2024-12-09 08:10:11,502 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.5 pTM=0.392 ipTM=0.377 tol=1.48
2024-12-09 08:11:13,068 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.8 pTM=0.391 ipTM=0.376 tol=1.21
2024-12-09 08:12:14,607 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=59.8 pTM=0.395 ipTM=0.383 tol=1.33
2024-12-09 08:13:16,134 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=59.9 pTM=0.397 ipTM=0.385 tol=1.47
2024-12-09 08:14:17,645 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59.9 pTM=0.401 ipTM=0.389 tol=1.54
2024-12-09 08:15:19,141 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60 pTM=0.4 ipTM=0.388 tol=1.55
2024-12-09 08:15:19,142 alphafold2_multimer_v3_model_4_seed_000 took 1908.2s (30 recycles)
2024-12-09 08:16:22,229 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.2 pTM=0.352 ipTM=0.258
2024-12-09 08:17:23,872 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.9 pTM=0.356 ipTM=0.193 tol=17.7
2024-12-09 08:18:25,510 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.9 pTM=0.36 ipTM=0.192 tol=11.1
2024-12-09 08:19:27,153 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.1 pTM=0.359 ipTM=0.193 tol=6.97
2024-12-09 08:20:28,759 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.4 pTM=0.36 ipTM=0.187 tol=4.14
2024-12-09 08:21:30,371 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.3 pTM=0.362 ipTM=0.195 tol=6.95
2024-12-09 08:22:32,024 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.7 pTM=0.359 ipTM=0.19 tol=3.61
2024-12-09 08:23:33,638 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.6 pTM=0.362 ipTM=0.192 tol=3.35
2024-12-09 08:24:35,293 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.9 pTM=0.362 ipTM=0.193 tol=6.68
2024-12-09 08:25:36,928 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.5 pTM=0.356 ipTM=0.191 tol=5.82
2024-12-09 08:26:38,598 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.8 pTM=0.357 ipTM=0.188 tol=5.94
2024-12-09 08:27:40,220 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.6 pTM=0.357 ipTM=0.196 tol=6.3
2024-12-09 08:28:41,839 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.5 pTM=0.355 ipTM=0.186 tol=2.57
2024-12-09 08:29:43,459 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.5 pTM=0.359 ipTM=0.191 tol=2.94
2024-12-09 08:30:45,131 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.6 pTM=0.357 ipTM=0.188 tol=2.81
2024-12-09 08:31:46,747 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.4 pTM=0.354 ipTM=0.196 tol=4.99
2024-12-09 08:32:48,395 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.6 pTM=0.356 ipTM=0.184 tol=2.56
2024-12-09 08:33:50,082 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.5 pTM=0.354 ipTM=0.186 tol=2.3
2024-12-09 08:34:51,754 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.5 pTM=0.356 ipTM=0.184 tol=7.01
2024-12-09 08:35:53,389 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.4 pTM=0.354 ipTM=0.189 tol=2.06
2024-12-09 08:36:55,027 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.5 pTM=0.354 ipTM=0.185 tol=5.6
2024-12-09 08:37:56,662 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.4 pTM=0.352 ipTM=0.193 tol=3.29
2024-12-09 08:38:58,304 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.5 pTM=0.35 ipTM=0.183 tol=6.98
2024-12-09 08:39:59,919 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.4 pTM=0.35 ipTM=0.193 tol=4.62
2024-12-09 08:41:01,531 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.5 pTM=0.352 ipTM=0.185 tol=3.16
2024-12-09 08:42:03,096 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.3 pTM=0.351 ipTM=0.194 tol=3.81
2024-12-09 08:43:04,696 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.7 pTM=0.351 ipTM=0.182 tol=6.13
2024-12-09 08:44:06,312 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.5 pTM=0.352 ipTM=0.199 tol=5.06
2024-12-09 08:45:07,938 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.6 pTM=0.351 ipTM=0.186 tol=2.96
2024-12-09 08:46:09,524 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.6 pTM=0.353 ipTM=0.194 tol=5.74
2024-12-09 08:47:11,148 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.6 pTM=0.354 ipTM=0.184 tol=2.68
2024-12-09 08:47:11,150 alphafold2_multimer_v3_model_5_seed_000 took 1910.6s (30 recycles)
2024-12-09 08:47:12,414 reranking models by 'multimer' metric
2024-12-09 08:47:16,030 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 08:49:59,197 Relaxation took 166.8s
2024-12-09 08:49:59,197 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60 pTM=0.4 ipTM=0.388
2024-12-09 08:53:02,181 Relaxation took 183.0s
2024-12-09 08:53:02,182 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56 pTM=0.355 ipTM=0.206
2024-12-09 08:57:36,063 Relaxation took 273.9s
2024-12-09 08:57:36,063 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.3 pTM=0.363 ipTM=0.193
2024-12-09 09:01:40,402 Relaxation took 244.3s
2024-12-09 09:01:40,402 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.6 pTM=0.341 ipTM=0.198
2024-12-09 09:04:26,451 Relaxation took 166.0s
2024-12-09 09:04:26,451 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.6 pTM=0.354 ipTM=0.184
2024-12-09 09:04:29,638 Done