2024-12-09 06:04:53,953 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 06:04:54,250 Running on GPU
2024-12-09 06:04:56,523 Found 6 citations for tools or databases
2024-12-09 06:04:56,524 Query 1/1: TRIM74_DTNBP1 (length 601)
2024-12-09 06:04:56,802 Sleeping for 9s. Reason: PENDING
2024-12-09 06:05:06,064 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:05:14,321 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:05:24,941 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:05:33,197 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:05:43,460 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:05:48,714 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:05:54,969 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:06:00,225 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:06:09,490 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:06:16,743 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:06:25,001 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:06:34,256 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:06:42,511 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:06:53,228 Sleeping for 6s. Reason: PENDING
2024-12-09 06:06:59,482 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:07:06,742 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:07:13,996 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:07:20,249 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:07:29,512 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:07:39,721 Setting max_seq=508, max_extra_seq=2048
2024-12-09 06:10:32,996 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.9 pTM=0.243 ipTM=0.121
2024-12-09 06:10:40,285 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.1 pTM=0.26 ipTM=0.23 tol=52.2
2024-12-09 06:10:47,601 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.2 pTM=0.231 ipTM=0.0985 tol=16.6
2024-12-09 06:10:54,899 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.2 pTM=0.299 ipTM=0.227 tol=49.9
2024-12-09 06:11:02,196 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.6 pTM=0.263 ipTM=0.205 tol=49.6
2024-12-09 06:11:09,495 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.8 pTM=0.236 ipTM=0.105 tol=10.8
2024-12-09 06:11:16,787 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.9 pTM=0.25 ipTM=0.126 tol=7.61
2024-12-09 06:11:24,096 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.1 pTM=0.279 ipTM=0.212 tol=54.4
2024-12-09 06:11:31,404 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.2 pTM=0.286 ipTM=0.216 tol=5.57
2024-12-09 06:11:38,713 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.6 pTM=0.255 ipTM=0.141 tol=6.98
2024-12-09 06:11:46,030 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.6 pTM=0.264 ipTM=0.155 tol=3.7
2024-12-09 06:11:53,359 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.9 pTM=0.247 ipTM=0.124 tol=3.98
2024-12-09 06:12:00,692 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.9 pTM=0.245 ipTM=0.165 tol=50.4
2024-12-09 06:12:08,036 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.7 pTM=0.249 ipTM=0.136 tol=50.1
2024-12-09 06:12:15,365 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.1 pTM=0.262 ipTM=0.16 tol=4.13
2024-12-09 06:12:22,735 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.5 pTM=0.226 ipTM=0.101 tol=39.7
2024-12-09 06:12:30,069 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.2 pTM=0.281 ipTM=0.259 tol=28.5
2024-12-09 06:12:37,406 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.3 pTM=0.243 ipTM=0.152 tol=7.95
2024-12-09 06:12:44,769 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.9 pTM=0.225 ipTM=0.0986 tol=14.3
2024-12-09 06:12:52,121 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.5 pTM=0.234 ipTM=0.111 tol=41.3
2024-12-09 06:12:59,461 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.1 pTM=0.245 ipTM=0.128 tol=6.62
2024-12-09 06:13:06,801 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.1 pTM=0.252 ipTM=0.14 tol=7.75
2024-12-09 06:13:14,152 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.6 pTM=0.234 ipTM=0.105 tol=10.9
2024-12-09 06:13:21,496 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.2 pTM=0.253 ipTM=0.135 tol=7.67
2024-12-09 06:13:28,838 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.1 pTM=0.236 ipTM=0.107 tol=5.57
2024-12-09 06:13:36,197 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.5 pTM=0.241 ipTM=0.107 tol=7.09
2024-12-09 06:13:43,535 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.9 pTM=0.247 ipTM=0.132 tol=3.09
2024-12-09 06:13:50,913 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.4 pTM=0.227 ipTM=0.102 tol=19.3
2024-12-09 06:13:58,285 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.6 pTM=0.238 ipTM=0.109 tol=17.5
2024-12-09 06:14:05,649 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.9 pTM=0.243 ipTM=0.127 tol=6.66
2024-12-09 06:14:13,011 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.3 pTM=0.234 ipTM=0.0992 tol=7.52
2024-12-09 06:14:13,011 alphafold2_multimer_v3_model_1_seed_000 took 388.3s (30 recycles)
2024-12-09 06:14:20,585 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.8 pTM=0.256 ipTM=0.13
2024-12-09 06:14:27,905 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.8 pTM=0.283 ipTM=0.204 tol=11.6
2024-12-09 06:14:35,234 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.7 pTM=0.267 ipTM=0.167 tol=7.79
2024-12-09 06:14:42,572 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.8 pTM=0.264 ipTM=0.164 tol=7.74
2024-12-09 06:14:49,910 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.1 pTM=0.258 ipTM=0.153 tol=2.97
2024-12-09 06:14:57,248 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.9 pTM=0.272 ipTM=0.181 tol=3.89
2024-12-09 06:15:04,593 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.8 pTM=0.255 ipTM=0.154 tol=6.09
2024-12-09 06:15:11,930 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.2 pTM=0.287 ipTM=0.209 tol=5.88
2024-12-09 06:15:19,265 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60 pTM=0.271 ipTM=0.183 tol=3.57
2024-12-09 06:15:26,607 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.4 pTM=0.257 ipTM=0.155 tol=4.21
2024-12-09 06:15:33,942 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.8 pTM=0.273 ipTM=0.192 tol=5.96
2024-12-09 06:15:41,285 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.8 pTM=0.265 ipTM=0.165 tol=5
2024-12-09 06:15:48,639 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.4 pTM=0.254 ipTM=0.141 tol=3.66
2024-12-09 06:15:55,990 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60 pTM=0.254 ipTM=0.143 tol=1.95
2024-12-09 06:16:03,342 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.7 pTM=0.254 ipTM=0.141 tol=1.7
2024-12-09 06:16:10,686 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.8 pTM=0.255 ipTM=0.144 tol=1.65
2024-12-09 06:16:18,030 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.5 pTM=0.271 ipTM=0.176 tol=2.92
2024-12-09 06:16:25,383 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.4 pTM=0.258 ipTM=0.159 tol=4.29
2024-12-09 06:16:32,726 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.6 pTM=0.258 ipTM=0.152 tol=1.96
2024-12-09 06:16:40,070 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.2 pTM=0.253 ipTM=0.141 tol=2.06
2024-12-09 06:16:47,419 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.8 pTM=0.252 ipTM=0.137 tol=2.03
2024-12-09 06:16:54,745 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.6 pTM=0.298 ipTM=0.245 tol=4.86
2024-12-09 06:17:02,093 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.9 pTM=0.266 ipTM=0.172 tol=3.89
2024-12-09 06:17:09,433 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.7 pTM=0.259 ipTM=0.156 tol=4.46
2024-12-09 06:17:16,776 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.8 pTM=0.26 ipTM=0.159 tol=5.06
2024-12-09 06:17:24,115 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.9 pTM=0.267 ipTM=0.168 tol=5.02
2024-12-09 06:17:31,470 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.9 pTM=0.255 ipTM=0.142 tol=4.66
2024-12-09 06:17:38,818 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.2 pTM=0.245 ipTM=0.114 tol=5.43
2024-12-09 06:17:46,154 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.7 pTM=0.3 ipTM=0.23 tol=5.79
2024-12-09 06:17:53,492 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.7 pTM=0.28 ipTM=0.208 tol=7.36
2024-12-09 06:18:00,833 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.2 pTM=0.279 ipTM=0.199 tol=2.76
2024-12-09 06:18:00,833 alphafold2_multimer_v3_model_2_seed_000 took 227.6s (30 recycles)
2024-12-09 06:18:08,460 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.8 pTM=0.245 ipTM=0.112
2024-12-09 06:18:15,876 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.7 pTM=0.245 ipTM=0.0956 tol=24.6
2024-12-09 06:18:23,303 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.6 pTM=0.243 ipTM=0.0938 tol=12
2024-12-09 06:18:30,719 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.2 pTM=0.244 ipTM=0.0982 tol=11.3
2024-12-09 06:18:38,124 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.2 pTM=0.247 ipTM=0.0986 tol=23.7
2024-12-09 06:18:45,544 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.4 pTM=0.244 ipTM=0.101 tol=25.8
2024-12-09 06:18:52,960 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.2 pTM=0.24 ipTM=0.092 tol=14.4
2024-12-09 06:19:00,361 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.2 pTM=0.254 ipTM=0.12 tol=14.1
2024-12-09 06:19:07,769 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.4 pTM=0.243 ipTM=0.0919 tol=23.6
2024-12-09 06:19:15,173 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.1 pTM=0.243 ipTM=0.103 tol=21.2
2024-12-09 06:19:22,590 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55.8 pTM=0.238 ipTM=0.0945 tol=21.2
2024-12-09 06:19:29,984 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.3 pTM=0.265 ipTM=0.141 tol=23.6
2024-12-09 06:19:37,402 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.2 pTM=0.242 ipTM=0.0953 tol=10
2024-12-09 06:19:44,807 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.2 pTM=0.268 ipTM=0.159 tol=12
2024-12-09 06:19:52,199 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.8 pTM=0.258 ipTM=0.133 tol=5.85
2024-12-09 06:19:59,585 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.8 pTM=0.263 ipTM=0.152 tol=5.86
2024-12-09 06:20:06,996 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.9 pTM=0.248 ipTM=0.107 tol=9.11
2024-12-09 06:20:14,374 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.9 pTM=0.268 ipTM=0.163 tol=7.38
2024-12-09 06:20:21,787 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.4 pTM=0.246 ipTM=0.105 tol=11.2
2024-12-09 06:20:29,172 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.1 pTM=0.262 ipTM=0.141 tol=10.5
2024-12-09 06:20:36,570 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.3 pTM=0.255 ipTM=0.121 tol=4.96
2024-12-09 06:20:43,951 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.5 pTM=0.273 ipTM=0.169 tol=5.8
2024-12-09 06:20:51,367 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54 pTM=0.247 ipTM=0.108 tol=10.1
2024-12-09 06:20:58,758 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.4 pTM=0.264 ipTM=0.144 tol=8.22
2024-12-09 06:21:06,155 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.7 pTM=0.259 ipTM=0.132 tol=8.75
2024-12-09 06:21:13,519 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.5 pTM=0.277 ipTM=0.172 tol=11.9
2024-12-09 06:21:20,903 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.4 pTM=0.251 ipTM=0.118 tol=8.24
2024-12-09 06:21:28,307 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.6 pTM=0.252 ipTM=0.109 tol=9.05
2024-12-09 06:21:35,701 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.4 pTM=0.251 ipTM=0.114 tol=6.78
2024-12-09 06:21:43,100 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.259 ipTM=0.139 tol=4.63
2024-12-09 06:21:50,520 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.1 pTM=0.241 ipTM=0.0969 tol=9.84
2024-12-09 06:21:50,521 alphafold2_multimer_v3_model_3_seed_000 took 229.4s (30 recycles)
2024-12-09 06:21:58,171 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.6 pTM=0.229 ipTM=0.0947
2024-12-09 06:22:05,608 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.3 pTM=0.233 ipTM=0.0838 tol=23.4
2024-12-09 06:22:13,047 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.2 pTM=0.226 ipTM=0.0886 tol=17.8
2024-12-09 06:22:20,483 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.2 pTM=0.223 ipTM=0.0914 tol=23
2024-12-09 06:22:27,940 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.5 pTM=0.222 ipTM=0.0893 tol=17
2024-12-09 06:22:35,351 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.2 pTM=0.228 ipTM=0.103 tol=10.7
2024-12-09 06:22:42,784 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.4 pTM=0.226 ipTM=0.102 tol=9.64
2024-12-09 06:22:50,220 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.3 pTM=0.23 ipTM=0.0886 tol=41.1
2024-12-09 06:22:57,641 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.2 pTM=0.232 ipTM=0.112 tol=36.8
2024-12-09 06:23:05,051 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.3 pTM=0.228 ipTM=0.101 tol=15.7
2024-12-09 06:23:12,478 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.9 pTM=0.229 ipTM=0.0906 tol=11.8
2024-12-09 06:23:19,882 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53 pTM=0.229 ipTM=0.104 tol=5.43
2024-12-09 06:23:27,300 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.4 pTM=0.23 ipTM=0.101 tol=13.6
2024-12-09 06:23:34,736 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.8 pTM=0.228 ipTM=0.0874 tol=19.5
2024-12-09 06:23:42,190 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.6 pTM=0.227 ipTM=0.084 tol=11.4
2024-12-09 06:23:49,625 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.1 pTM=0.229 ipTM=0.0916 tol=36
2024-12-09 06:23:57,042 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53 pTM=0.231 ipTM=0.104 tol=8.06
2024-12-09 06:24:04,482 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.5 pTM=0.223 ipTM=0.0916 tol=12.4
2024-12-09 06:24:11,916 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.2 pTM=0.231 ipTM=0.0995 tol=14.8
2024-12-09 06:24:19,312 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.9 pTM=0.243 ipTM=0.135 tol=9.13
2024-12-09 06:24:26,719 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.8 pTM=0.234 ipTM=0.108 tol=9.99
2024-12-09 06:24:34,109 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.5 pTM=0.252 ipTM=0.158 tol=9.43
2024-12-09 06:24:41,535 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.8 pTM=0.226 ipTM=0.0933 tol=18.4
2024-12-09 06:24:48,979 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.6 pTM=0.224 ipTM=0.0869 tol=20.1
2024-12-09 06:24:56,409 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.4 pTM=0.225 ipTM=0.0966 tol=37.4
2024-12-09 06:25:03,811 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.3 pTM=0.236 ipTM=0.109 tol=6.59
2024-12-09 06:25:11,209 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.2 pTM=0.231 ipTM=0.107 tol=8.98
2024-12-09 06:25:18,580 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55 pTM=0.272 ipTM=0.194 tol=10.3
2024-12-09 06:25:26,006 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.4 pTM=0.225 ipTM=0.0851 tol=11.8
2024-12-09 06:25:33,417 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.8 pTM=0.234 ipTM=0.11 tol=11.4
2024-12-09 06:25:40,844 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.3 pTM=0.224 ipTM=0.0842 tol=6.8
2024-12-09 06:25:40,844 alphafold2_multimer_v3_model_4_seed_000 took 230.1s (30 recycles)
2024-12-09 06:25:48,491 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.8 pTM=0.237 ipTM=0.0888
2024-12-09 06:25:55,893 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.6 pTM=0.242 ipTM=0.107 tol=44.2
2024-12-09 06:26:03,257 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.3 pTM=0.328 ipTM=0.34 tol=45.8
2024-12-09 06:26:10,618 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.1 pTM=0.251 ipTM=0.129 tol=12.6
2024-12-09 06:26:17,992 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55 pTM=0.255 ipTM=0.126 tol=7.59
2024-12-09 06:26:25,388 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.6 pTM=0.24 ipTM=0.0945 tol=10.6
2024-12-09 06:26:32,753 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.3 pTM=0.301 ipTM=0.226 tol=12.2
2024-12-09 06:26:40,119 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.9 pTM=0.25 ipTM=0.112 tol=8.8
2024-12-09 06:26:47,508 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.3 pTM=0.248 ipTM=0.111 tol=10
2024-12-09 06:26:54,876 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.2 pTM=0.304 ipTM=0.241 tol=11.1
2024-12-09 06:27:02,262 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.2 pTM=0.243 ipTM=0.11 tol=8.63
2024-12-09 06:27:09,692 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.9 pTM=0.236 ipTM=0.093 tol=28.8
2024-12-09 06:27:17,108 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53 pTM=0.24 ipTM=0.0966 tol=20.9
2024-12-09 06:27:24,511 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54 pTM=0.255 ipTM=0.13 tol=14
2024-12-09 06:27:31,902 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.7 pTM=0.243 ipTM=0.107 tol=8.18
2024-12-09 06:27:39,260 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.2 pTM=0.323 ipTM=0.295 tol=12.1
2024-12-09 06:27:46,628 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54 pTM=0.249 ipTM=0.131 tol=7.45
2024-12-09 06:27:53,989 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.4 pTM=0.257 ipTM=0.131 tol=6.04
2024-12-09 06:28:01,366 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.3 pTM=0.247 ipTM=0.111 tol=5.14
2024-12-09 06:28:08,765 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.4 pTM=0.247 ipTM=0.111 tol=7.54
2024-12-09 06:28:16,171 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.7 pTM=0.241 ipTM=0.0909 tol=7.38
2024-12-09 06:28:23,596 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53 pTM=0.245 ipTM=0.0922 tol=38.8
2024-12-09 06:28:31,023 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.3 pTM=0.244 ipTM=0.0872 tol=6.37
2024-12-09 06:28:38,438 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.6 pTM=0.239 ipTM=0.0888 tol=11.3
2024-12-09 06:28:45,820 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.9 pTM=0.247 ipTM=0.109 tol=8.95
2024-12-09 06:28:53,202 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.2 pTM=0.241 ipTM=0.0907 tol=41.8
2024-12-09 06:29:00,600 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.7 pTM=0.247 ipTM=0.117 tol=14.3
2024-12-09 06:29:07,999 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.9 pTM=0.243 ipTM=0.0998 tol=9.98
2024-12-09 06:29:15,364 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.3 pTM=0.268 ipTM=0.165 tol=10.5
2024-12-09 06:29:22,737 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.8 pTM=0.247 ipTM=0.113 tol=7.94
2024-12-09 06:29:30,087 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57 pTM=0.312 ipTM=0.268 tol=8.67
2024-12-09 06:29:30,088 alphafold2_multimer_v3_model_5_seed_000 took 229.0s (30 recycles)
2024-12-09 06:29:30,329 reranking models by 'multimer' metric
2024-12-09 06:29:33,338 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 06:30:14,239 Relaxation took 43.9s
2024-12-09 06:30:14,239 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57 pTM=0.312 ipTM=0.268
2024-12-09 06:30:44,705 Relaxation took 30.5s
2024-12-09 06:30:44,706 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.2 pTM=0.279 ipTM=0.199
2024-12-09 06:31:08,091 Relaxation took 23.4s
2024-12-09 06:31:08,091 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.3 pTM=0.234 ipTM=0.0992
2024-12-09 06:31:37,998 Relaxation took 29.9s
2024-12-09 06:31:37,998 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.1 pTM=0.241 ipTM=0.0969
2024-12-09 06:32:10,092 Relaxation took 32.1s
2024-12-09 06:32:10,092 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.3 pTM=0.224 ipTM=0.0842
2024-12-09 06:32:11,203 Done