2024-12-09 06:06:14,074 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 06:06:14,367 Running on GPU
2024-12-09 06:06:16,368 Found 6 citations for tools or databases
2024-12-09 06:06:16,369 Query 1/1: TRIM8_CDSN (length 1080)
2024-12-09 06:06:16,661 Sleeping for 10s. Reason: PENDING
2024-12-09 06:06:26,916 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:06:34,175 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:06:40,428 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:06:48,687 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:06:58,960 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:07:06,215 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:07:15,475 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:07:25,743 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:07:32,005 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:07:39,263 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:07:45,532 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:07:50,786 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:07:59,044 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:08:05,301 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:08:13,557 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:08:19,822 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:08:29,089 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:08:36,991 Sleeping for 6s. Reason: PENDING
2024-12-09 06:08:43,245 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:08:51,506 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:08:56,759 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:09:06,168 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:09:14,435 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:09:20,689 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:09:26,950 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:09:36,210 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:09:41,465 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:09:46,728 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:09:56,393 Setting max_seq=508, max_extra_seq=1759
2024-12-09 06:12:20,389 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=37.8 pTM=0.264 ipTM=0.141
2024-12-09 06:12:42,644 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=39.2 pTM=0.276 ipTM=0.136 tol=13.4
2024-12-09 06:13:04,987 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.2 pTM=0.277 ipTM=0.141 tol=11.5
2024-12-09 06:13:27,416 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=39.3 pTM=0.277 ipTM=0.142 tol=8.29
2024-12-09 06:13:49,910 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.5 pTM=0.276 ipTM=0.145 tol=11.6
2024-12-09 06:14:12,420 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=39.6 pTM=0.274 ipTM=0.143 tol=9.97
2024-12-09 06:14:34,953 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=39.6 pTM=0.275 ipTM=0.145 tol=10.4
2024-12-09 06:14:57,496 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.5 pTM=0.273 ipTM=0.144 tol=6.2
2024-12-09 06:15:20,043 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=39.5 pTM=0.273 ipTM=0.145 tol=4.59
2024-12-09 06:15:42,595 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=39.6 pTM=0.273 ipTM=0.144 tol=3.46
2024-12-09 06:16:05,151 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39.6 pTM=0.274 ipTM=0.146 tol=3.08
2024-12-09 06:16:27,714 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.7 pTM=0.275 ipTM=0.145 tol=2.75
2024-12-09 06:16:50,288 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39.6 pTM=0.273 ipTM=0.146 tol=1.86
2024-12-09 06:17:12,868 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=39.6 pTM=0.272 ipTM=0.145 tol=2.15
2024-12-09 06:17:35,432 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=39.6 pTM=0.274 ipTM=0.146 tol=1.94
2024-12-09 06:17:58,019 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=39.7 pTM=0.275 ipTM=0.146 tol=2.85
2024-12-09 06:18:20,559 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39.7 pTM=0.274 ipTM=0.146 tol=2.02
2024-12-09 06:18:43,100 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=39.6 pTM=0.273 ipTM=0.146 tol=2.19
2024-12-09 06:19:05,677 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=39.6 pTM=0.274 ipTM=0.147 tol=2.6
2024-12-09 06:19:28,241 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39.9 pTM=0.275 ipTM=0.146 tol=7.13
2024-12-09 06:19:50,829 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.8 pTM=0.276 ipTM=0.147 tol=6.96
2024-12-09 06:20:13,399 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.7 pTM=0.275 ipTM=0.147 tol=4.28
2024-12-09 06:20:35,955 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.7 pTM=0.273 ipTM=0.148 tol=2.95
2024-12-09 06:20:58,501 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.7 pTM=0.275 ipTM=0.148 tol=2.98
2024-12-09 06:21:21,085 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.7 pTM=0.275 ipTM=0.15 tol=2.46
2024-12-09 06:21:43,691 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.7 pTM=0.275 ipTM=0.149 tol=2.3
2024-12-09 06:22:06,300 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.6 pTM=0.273 ipTM=0.149 tol=7.38
2024-12-09 06:22:28,907 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.5 pTM=0.274 ipTM=0.149 tol=7.14
2024-12-09 06:22:51,544 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39.7 pTM=0.275 ipTM=0.149 tol=5.24
2024-12-09 06:23:14,146 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.5 pTM=0.274 ipTM=0.149 tol=3.55
2024-12-09 06:23:36,772 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.6 pTM=0.275 ipTM=0.149 tol=3.37
2024-12-09 06:23:36,773 alphafold2_multimer_v3_model_1_seed_000 took 815.2s (30 recycles)
2024-12-09 06:24:00,001 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=38.2 pTM=0.279 ipTM=0.153
2024-12-09 06:24:22,564 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=39.9 pTM=0.295 ipTM=0.165 tol=17
2024-12-09 06:24:45,138 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.2 pTM=0.298 ipTM=0.17 tol=13.8
2024-12-09 06:25:07,697 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40 pTM=0.302 ipTM=0.175 tol=8.45
2024-12-09 06:25:30,235 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=40 pTM=0.302 ipTM=0.172 tol=6.21
2024-12-09 06:25:52,732 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40 pTM=0.302 ipTM=0.172 tol=5.77
2024-12-09 06:26:15,237 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=40.1 pTM=0.3 ipTM=0.169 tol=7.09
2024-12-09 06:26:37,737 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=39.6 pTM=0.298 ipTM=0.171 tol=6.01
2024-12-09 06:27:00,225 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=39.8 pTM=0.297 ipTM=0.168 tol=6.3
2024-12-09 06:27:22,718 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=39.8 pTM=0.298 ipTM=0.17 tol=5.43
2024-12-09 06:27:45,216 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=40 pTM=0.297 ipTM=0.169 tol=9.2
2024-12-09 06:28:07,687 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=40.1 pTM=0.299 ipTM=0.17 tol=8.79
2024-12-09 06:28:30,175 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=40.2 pTM=0.298 ipTM=0.168 tol=7.42
2024-12-09 06:28:52,651 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=40.1 pTM=0.298 ipTM=0.169 tol=5.07
2024-12-09 06:29:15,160 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=40.2 pTM=0.296 ipTM=0.168 tol=8.27
2024-12-09 06:29:37,656 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=40.2 pTM=0.298 ipTM=0.17 tol=4.68
2024-12-09 06:30:00,149 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=39.4 pTM=0.296 ipTM=0.167 tol=15.9
2024-12-09 06:30:22,651 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.1 pTM=0.297 ipTM=0.168 tol=13.7
2024-12-09 06:30:45,136 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=40.2 pTM=0.297 ipTM=0.167 tol=6.4
2024-12-09 06:31:07,615 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=40.3 pTM=0.297 ipTM=0.168 tol=6.86
2024-12-09 06:31:30,110 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=40.3 pTM=0.298 ipTM=0.167 tol=8.22
2024-12-09 06:31:52,622 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40.2 pTM=0.297 ipTM=0.168 tol=9.32
2024-12-09 06:32:15,083 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.3 pTM=0.297 ipTM=0.17 tol=7.23
2024-12-09 06:32:37,561 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=40.3 pTM=0.299 ipTM=0.173 tol=7.06
2024-12-09 06:33:00,034 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=40.4 pTM=0.299 ipTM=0.172 tol=5.79
2024-12-09 06:33:22,483 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=40.2 pTM=0.299 ipTM=0.172 tol=3.39
2024-12-09 06:33:44,942 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=40.2 pTM=0.296 ipTM=0.171 tol=3.19
2024-12-09 06:34:07,401 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.3 pTM=0.299 ipTM=0.173 tol=3.34
2024-12-09 06:34:29,852 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=40.4 pTM=0.301 ipTM=0.173 tol=3.48
2024-12-09 06:34:52,312 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=40.2 pTM=0.299 ipTM=0.173 tol=3.59
2024-12-09 06:35:14,798 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40.3 pTM=0.299 ipTM=0.172 tol=3.7
2024-12-09 06:35:14,798 alphafold2_multimer_v3_model_2_seed_000 took 697.3s (30 recycles)
2024-12-09 06:35:38,166 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=36.5 pTM=0.277 ipTM=0.144
2024-12-09 06:36:00,874 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=37.6 pTM=0.289 ipTM=0.148 tol=28.2
2024-12-09 06:36:23,600 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38.2 pTM=0.302 ipTM=0.152 tol=16.4
2024-12-09 06:36:46,288 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=38.6 pTM=0.304 ipTM=0.156 tol=11.1
2024-12-09 06:37:08,967 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=38.9 pTM=0.304 ipTM=0.156 tol=7.82
2024-12-09 06:37:31,617 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=38.9 pTM=0.304 ipTM=0.161 tol=13.8
2024-12-09 06:37:54,254 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=38.9 pTM=0.306 ipTM=0.16 tol=7.72
2024-12-09 06:38:16,858 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=38.8 pTM=0.305 ipTM=0.161 tol=10.9
2024-12-09 06:38:39,488 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=38.8 pTM=0.304 ipTM=0.161 tol=10.2
2024-12-09 06:39:02,131 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=38.8 pTM=0.304 ipTM=0.162 tol=10.1
2024-12-09 06:39:24,772 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=38.8 pTM=0.304 ipTM=0.161 tol=9.34
2024-12-09 06:39:47,406 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=38.9 pTM=0.308 ipTM=0.166 tol=12.4
2024-12-09 06:40:10,040 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=38.9 pTM=0.305 ipTM=0.163 tol=8.95
2024-12-09 06:40:32,668 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=38.8 pTM=0.305 ipTM=0.164 tol=8.63
2024-12-09 06:40:55,300 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=38.9 pTM=0.306 ipTM=0.166 tol=8.05
2024-12-09 06:41:17,911 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=39 pTM=0.307 ipTM=0.168 tol=12.9
2024-12-09 06:41:40,603 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=38.8 pTM=0.306 ipTM=0.166 tol=9.45
2024-12-09 06:42:03,284 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=38.9 pTM=0.307 ipTM=0.169 tol=7.7
2024-12-09 06:42:25,979 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=38.8 pTM=0.306 ipTM=0.166 tol=5.97
2024-12-09 06:42:48,665 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=38.9 pTM=0.308 ipTM=0.169 tol=3
2024-12-09 06:43:11,360 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=38.9 pTM=0.307 ipTM=0.166 tol=9.48
2024-12-09 06:43:34,082 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=38.8 pTM=0.305 ipTM=0.164 tol=8.2
2024-12-09 06:43:56,790 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=38.8 pTM=0.305 ipTM=0.164 tol=6.87
2024-12-09 06:44:19,518 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=38.9 pTM=0.306 ipTM=0.168 tol=7.95
2024-12-09 06:44:42,244 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=39.1 pTM=0.307 ipTM=0.166 tol=13
2024-12-09 06:45:04,961 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=39.1 pTM=0.306 ipTM=0.165 tol=11.5
2024-12-09 06:45:27,683 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=38.8 pTM=0.304 ipTM=0.163 tol=3.69
2024-12-09 06:45:50,408 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=38.8 pTM=0.307 ipTM=0.167 tol=13.4
2024-12-09 06:46:13,108 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=38.9 pTM=0.308 ipTM=0.168 tol=10.8
2024-12-09 06:46:35,837 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=38.9 pTM=0.309 ipTM=0.169 tol=12
2024-12-09 06:46:58,549 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=38.9 pTM=0.307 ipTM=0.166 tol=9.52
2024-12-09 06:46:58,550 alphafold2_multimer_v3_model_3_seed_000 took 703.0s (30 recycles)
2024-12-09 06:47:21,879 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=37.5 pTM=0.311 ipTM=0.227
2024-12-09 06:47:44,427 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.2 pTM=0.312 ipTM=0.171 tol=17.6
2024-12-09 06:48:06,965 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.3 pTM=0.314 ipTM=0.178 tol=16.3
2024-12-09 06:48:29,509 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.4 pTM=0.312 ipTM=0.175 tol=7.75
2024-12-09 06:48:52,051 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.8 pTM=0.315 ipTM=0.181 tol=7.37
2024-12-09 06:49:14,587 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.6 pTM=0.315 ipTM=0.178 tol=4.65
2024-12-09 06:49:37,117 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39.7 pTM=0.317 ipTM=0.183 tol=3.81
2024-12-09 06:49:59,646 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.4 pTM=0.315 ipTM=0.18 tol=3.23
2024-12-09 06:50:22,168 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.4 pTM=0.316 ipTM=0.182 tol=8.22
2024-12-09 06:50:44,691 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39.4 pTM=0.313 ipTM=0.18 tol=7.59
2024-12-09 06:51:07,198 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.6 pTM=0.315 ipTM=0.181 tol=5.47
2024-12-09 06:51:29,717 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.6 pTM=0.316 ipTM=0.18 tol=6.41
2024-12-09 06:51:52,238 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.5 pTM=0.311 ipTM=0.182 tol=4.52
2024-12-09 06:52:14,758 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.3 pTM=0.311 ipTM=0.179 tol=5.95
2024-12-09 06:52:37,301 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.5 pTM=0.314 ipTM=0.183 tol=8.32
2024-12-09 06:52:59,815 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=39.6 pTM=0.316 ipTM=0.182 tol=4.87
2024-12-09 06:53:22,325 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.4 pTM=0.311 ipTM=0.182 tol=7.98
2024-12-09 06:53:44,842 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.4 pTM=0.314 ipTM=0.181 tol=5.99
2024-12-09 06:54:07,383 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.5 pTM=0.311 ipTM=0.18 tol=9.63
2024-12-09 06:54:29,922 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.5 pTM=0.316 ipTM=0.18 tol=5.59
2024-12-09 06:54:52,488 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.7 pTM=0.315 ipTM=0.178 tol=3.24
2024-12-09 06:55:15,053 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39.4 pTM=0.313 ipTM=0.177 tol=11.8
2024-12-09 06:55:37,645 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=39.3 pTM=0.311 ipTM=0.177 tol=9.62
2024-12-09 06:56:00,240 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.6 pTM=0.315 ipTM=0.177 tol=8.25
2024-12-09 06:56:22,818 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.5 pTM=0.313 ipTM=0.176 tol=8.3
2024-12-09 06:56:45,385 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.7 pTM=0.314 ipTM=0.175 tol=7.43
2024-12-09 06:57:07,958 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.4 pTM=0.312 ipTM=0.176 tol=3.33
2024-12-09 06:57:30,499 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.6 pTM=0.314 ipTM=0.178 tol=4.13
2024-12-09 06:57:53,006 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.7 pTM=0.315 ipTM=0.179 tol=8.68
2024-12-09 06:58:15,525 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.6 pTM=0.314 ipTM=0.177 tol=7.71
2024-12-09 06:58:38,069 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39.6 pTM=0.313 ipTM=0.177 tol=7.85
2024-12-09 06:58:38,070 alphafold2_multimer_v3_model_4_seed_000 took 698.8s (30 recycles)
2024-12-09 06:59:01,468 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=37 pTM=0.275 ipTM=0.142
2024-12-09 06:59:24,176 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38.3 pTM=0.29 ipTM=0.141 tol=17.4
2024-12-09 06:59:46,905 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=39.2 pTM=0.293 ipTM=0.148 tol=14.5
2024-12-09 07:00:09,613 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=39.4 pTM=0.294 ipTM=0.153 tol=10.3
2024-12-09 07:00:32,336 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=39.4 pTM=0.293 ipTM=0.154 tol=10.4
2024-12-09 07:00:55,028 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=39.5 pTM=0.295 ipTM=0.151 tol=9.23
2024-12-09 07:01:17,732 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=39.4 pTM=0.295 ipTM=0.15 tol=6.87
2024-12-09 07:01:40,471 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=39.3 pTM=0.295 ipTM=0.153 tol=6.29
2024-12-09 07:02:03,153 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=39.5 pTM=0.296 ipTM=0.15 tol=4.14
2024-12-09 07:02:25,828 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=39.6 pTM=0.297 ipTM=0.151 tol=4.11
2024-12-09 07:02:48,518 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=39.4 pTM=0.295 ipTM=0.15 tol=5.82
2024-12-09 07:03:11,205 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=39.5 pTM=0.299 ipTM=0.155 tol=13.1
2024-12-09 07:03:33,903 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=39.4 pTM=0.297 ipTM=0.152 tol=9.61
2024-12-09 07:03:56,578 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=39.6 pTM=0.296 ipTM=0.152 tol=6.77
2024-12-09 07:04:19,257 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=39.6 pTM=0.298 ipTM=0.154 tol=4.23
2024-12-09 07:04:41,916 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=39.8 pTM=0.299 ipTM=0.157 tol=4.4
2024-12-09 07:05:04,570 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=39.6 pTM=0.301 ipTM=0.154 tol=4.03
2024-12-09 07:05:27,225 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=39.5 pTM=0.297 ipTM=0.157 tol=4.45
2024-12-09 07:05:49,876 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=39.5 pTM=0.298 ipTM=0.154 tol=3.83
2024-12-09 07:06:12,517 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=39.6 pTM=0.3 ipTM=0.157 tol=3.39
2024-12-09 07:06:35,155 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=39.7 pTM=0.303 ipTM=0.159 tol=3.71
2024-12-09 07:06:57,792 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=39.4 pTM=0.297 ipTM=0.155 tol=3.89
2024-12-09 07:07:20,440 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=39.5 pTM=0.296 ipTM=0.155 tol=4.22
2024-12-09 07:07:43,094 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=39.5 pTM=0.297 ipTM=0.156 tol=6.2
2024-12-09 07:08:05,752 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=39.5 pTM=0.3 ipTM=0.157 tol=5.5
2024-12-09 07:08:28,407 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=39.4 pTM=0.297 ipTM=0.157 tol=3.76
2024-12-09 07:08:51,055 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=39.4 pTM=0.297 ipTM=0.157 tol=3.91
2024-12-09 07:09:13,707 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=39.5 pTM=0.3 ipTM=0.157 tol=3.57
2024-12-09 07:09:36,392 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=39.5 pTM=0.298 ipTM=0.16 tol=10.5
2024-12-09 07:09:59,082 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=39.3 pTM=0.301 ipTM=0.159 tol=6.15
2024-12-09 07:10:21,759 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=39.3 pTM=0.297 ipTM=0.155 tol=4.05
2024-12-09 07:10:21,760 alphafold2_multimer_v3_model_5_seed_000 took 703.0s (30 recycles)
2024-12-09 07:10:22,474 reranking models by 'multimer' metric
2024-12-09 07:10:23,691 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 07:12:14,946 Relaxation took 112.5s
2024-12-09 07:12:14,946 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39.6 pTM=0.313 ipTM=0.177
2024-12-09 07:14:05,493 Relaxation took 110.5s
2024-12-09 07:14:05,493 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40.3 pTM=0.299 ipTM=0.172
2024-12-09 07:15:30,952 Relaxation took 85.5s
2024-12-09 07:15:30,952 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=38.9 pTM=0.307 ipTM=0.166
2024-12-09 07:17:05,749 Relaxation took 94.8s
2024-12-09 07:17:05,749 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=39.3 pTM=0.297 ipTM=0.155
2024-12-09 07:18:34,081 Relaxation took 88.3s
2024-12-09 07:18:34,081 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.6 pTM=0.275 ipTM=0.149
2024-12-09 07:18:36,140 Done