2024-12-09 06:09:12,755 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 06:09:13,097 Running on GPU
2024-12-09 06:09:13,944 Found 6 citations for tools or databases
2024-12-09 06:09:13,944 Query 1/1: TRIML2_SRGAP2 (length 1536)
2024-12-09 06:09:14,207 Sleeping for 6s. Reason: PENDING
2024-12-09 06:09:20,462 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:09:30,723 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:09:36,979 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:09:44,234 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:09:54,497 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:10:03,768 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:10:14,027 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:10:23,286 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:10:29,555 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:10:39,815 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:10:50,071 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:11:00,331 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:11:08,589 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:11:17,853 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:11:28,114 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:11:35,378 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:11:45,643 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:11:51,903 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:11:58,164 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:12:03,421 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:12:10,681 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:12:20,946 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:12:28,216 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:12:36,474 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:12:45,731 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:12:54,994 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:13:00,248 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:13:08,510 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:13:14,766 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:13:23,021 Sleeping for 9s. Reason: PENDING
2024-12-09 06:13:32,276 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:13:37,536 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:13:43,947 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:13:54,210 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:14:02,465 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:14:09,722 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:14:19,985 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:14:30,247 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:14:40,507 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:14:47,768 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:14:54,021 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:15:02,284 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:15:10,543 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:15:19,807 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:15:29,064 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:15:39,329 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:15:45,583 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:15:53,838 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:16:00,100 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:16:06,356 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:16:17,896 Setting max_seq=508, max_extra_seq=2048
2024-12-09 06:19:37,343 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.3 pTM=0.344 ipTM=0.192
2024-12-09 06:20:31,756 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.2 pTM=0.378 ipTM=0.275 tol=12.8
2024-12-09 06:21:26,372 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.5 pTM=0.369 ipTM=0.379 tol=16.2
2024-12-09 06:22:21,218 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.8 pTM=0.357 ipTM=0.301 tol=22.3
2024-12-09 06:23:15,969 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.2 pTM=0.355 ipTM=0.304 tol=21.2
2024-12-09 06:24:10,665 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.8 pTM=0.367 ipTM=0.519 tol=8.28
2024-12-09 06:25:05,376 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.8 pTM=0.372 ipTM=0.554 tol=4.24
2024-12-09 06:26:00,144 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.2 pTM=0.368 ipTM=0.564 tol=9.6
2024-12-09 06:26:55,030 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.2 pTM=0.361 ipTM=0.553 tol=23.5
2024-12-09 06:27:49,891 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.2 pTM=0.356 ipTM=0.543 tol=16.9
2024-12-09 06:28:44,744 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.6 pTM=0.356 ipTM=0.544 tol=14.7
2024-12-09 06:29:39,550 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.3 pTM=0.355 ipTM=0.558 tol=8.87
2024-12-09 06:30:34,373 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.4 pTM=0.357 ipTM=0.546 tol=5.62
2024-12-09 06:31:29,217 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.2 pTM=0.354 ipTM=0.54 tol=3.79
2024-12-09 06:32:24,051 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.2 pTM=0.357 ipTM=0.555 tol=3.88
2024-12-09 06:33:18,906 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.4 pTM=0.354 ipTM=0.547 tol=5.57
2024-12-09 06:34:13,738 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.2 pTM=0.356 ipTM=0.553 tol=4.62
2024-12-09 06:35:08,553 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.2 pTM=0.356 ipTM=0.535 tol=6.56
2024-12-09 06:36:03,359 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=63.2 pTM=0.359 ipTM=0.548 tol=4.3
2024-12-09 06:36:58,182 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.4 pTM=0.357 ipTM=0.551 tol=6.69
2024-12-09 06:37:52,973 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.2 pTM=0.358 ipTM=0.562 tol=3.88
2024-12-09 06:38:47,794 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.3 pTM=0.362 ipTM=0.579 tol=6.89
2024-12-09 06:39:42,630 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.4 pTM=0.361 ipTM=0.578 tol=6.78
2024-12-09 06:40:37,477 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.4 pTM=0.359 ipTM=0.567 tol=6.48
2024-12-09 06:41:32,319 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.9 pTM=0.357 ipTM=0.544 tol=15
2024-12-09 06:42:27,161 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.1 pTM=0.358 ipTM=0.545 tol=11.3
2024-12-09 06:43:21,983 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.3 pTM=0.364 ipTM=0.565 tol=6.12
2024-12-09 06:44:16,730 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.2 pTM=0.424 ipTM=0.598 tol=4.86
2024-12-09 06:45:11,493 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.4 pTM=0.392 ipTM=0.56 tol=3.01
2024-12-09 06:46:06,259 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.7 pTM=0.392 ipTM=0.565 tol=2.85
2024-12-09 06:47:01,022 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.9 pTM=0.401 ipTM=0.559 tol=2.47
2024-12-09 06:47:01,023 alphafold2_multimer_v3_model_1_seed_000 took 1836.6s (30 recycles)
2024-12-09 06:47:57,646 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.3 pTM=0.344 ipTM=0.18
2024-12-09 06:48:52,515 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.6 pTM=0.346 ipTM=0.181 tol=13.1
2024-12-09 06:49:47,478 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.4 pTM=0.424 ipTM=0.66 tol=27.3
2024-12-09 06:50:42,440 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56 pTM=0.372 ipTM=0.354 tol=17.7
2024-12-09 06:51:37,329 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.3 pTM=0.394 ipTM=0.456 tol=18.3
2024-12-09 06:52:32,224 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.9 pTM=0.377 ipTM=0.391 tol=8.49
2024-12-09 06:53:27,217 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.2 pTM=0.373 ipTM=0.36 tol=17.1
2024-12-09 06:54:22,211 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.4 pTM=0.389 ipTM=0.47 tol=8.84
2024-12-09 06:55:17,255 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64 pTM=0.367 ipTM=0.319 tol=7.66
2024-12-09 06:56:12,304 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.1 pTM=0.369 ipTM=0.35 tol=6.98
2024-12-09 06:57:07,334 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.1 pTM=0.363 ipTM=0.304 tol=6.85
2024-12-09 06:58:02,402 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.6 pTM=0.36 ipTM=0.306 tol=7.82
2024-12-09 06:58:57,424 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.2 pTM=0.383 ipTM=0.423 tol=7.48
2024-12-09 06:59:52,452 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.8 pTM=0.364 ipTM=0.273 tol=5.5
2024-12-09 07:00:47,513 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.2 pTM=0.361 ipTM=0.259 tol=14.7
2024-12-09 07:01:42,509 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.1 pTM=0.376 ipTM=0.341 tol=10.5
2024-12-09 07:02:37,488 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.2 pTM=0.372 ipTM=0.364 tol=10.6
2024-12-09 07:03:32,505 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.1 pTM=0.371 ipTM=0.359 tol=8.13
2024-12-09 07:04:27,472 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.1 pTM=0.374 ipTM=0.314 tol=6.46
2024-12-09 07:05:22,581 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.7 pTM=0.356 ipTM=0.274 tol=7.47
2024-12-09 07:06:17,585 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.1 pTM=0.377 ipTM=0.365 tol=7.05
2024-12-09 07:07:12,606 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64 pTM=0.365 ipTM=0.282 tol=2.94
2024-12-09 07:08:07,652 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.8 pTM=0.363 ipTM=0.361 tol=9.48
2024-12-09 07:09:02,630 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.5 pTM=0.386 ipTM=0.413 tol=9.43
2024-12-09 07:09:57,670 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.9 pTM=0.362 ipTM=0.269 tol=7.84
2024-12-09 07:10:52,683 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.1 pTM=0.372 ipTM=0.286 tol=6.76
2024-12-09 07:11:47,682 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.2 pTM=0.371 ipTM=0.304 tol=8.52
2024-12-09 07:12:42,674 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.9 pTM=0.365 ipTM=0.381 tol=14.5
2024-12-09 07:13:37,641 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.6 pTM=0.389 ipTM=0.401 tol=10.5
2024-12-09 07:14:32,576 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.4 pTM=0.367 ipTM=0.298 tol=9.13
2024-12-09 07:15:27,519 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.6 pTM=0.39 ipTM=0.395 tol=8.28
2024-12-09 07:15:27,520 alphafold2_multimer_v3_model_2_seed_000 took 1704.7s (30 recycles)
2024-12-09 07:16:24,365 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.2 pTM=0.35 ipTM=0.192
2024-12-09 07:17:19,484 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.2 pTM=0.399 ipTM=0.535 tol=28.8
2024-12-09 07:18:14,516 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.8 pTM=0.366 ipTM=0.295 tol=22.3
2024-12-09 07:19:09,653 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.3 pTM=0.344 ipTM=0.186 tol=21.1
2024-12-09 07:20:04,774 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.6 pTM=0.348 ipTM=0.18 tol=25.8
2024-12-09 07:20:59,811 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.5 pTM=0.362 ipTM=0.225 tol=13
2024-12-09 07:21:54,759 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.5 pTM=0.38 ipTM=0.417 tol=8.83
2024-12-09 07:22:49,775 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.4 pTM=0.355 ipTM=0.194 tol=6.08
2024-12-09 07:23:44,789 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.7 pTM=0.355 ipTM=0.216 tol=21.4
2024-12-09 07:24:39,685 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.1 pTM=0.357 ipTM=0.225 tol=7.03
2024-12-09 07:25:34,572 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.2 pTM=0.354 ipTM=0.219 tol=7.54
2024-12-09 07:26:29,519 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.2 pTM=0.352 ipTM=0.209 tol=6.85
2024-12-09 07:27:24,432 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.2 pTM=0.355 ipTM=0.208 tol=5.91
2024-12-09 07:28:19,373 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.9 pTM=0.352 ipTM=0.192 tol=5.05
2024-12-09 07:29:14,314 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.1 pTM=0.355 ipTM=0.209 tol=4.84
2024-12-09 07:30:09,241 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.3 pTM=0.352 ipTM=0.197 tol=5.16
2024-12-09 07:31:04,171 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59 pTM=0.351 ipTM=0.189 tol=4.65
2024-12-09 07:31:59,085 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.1 pTM=0.356 ipTM=0.215 tol=10.2
2024-12-09 07:32:53,998 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.6 pTM=0.356 ipTM=0.214 tol=8.95
2024-12-09 07:33:48,908 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.4 pTM=0.359 ipTM=0.232 tol=4.91
2024-12-09 07:34:43,812 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.7 pTM=0.359 ipTM=0.237 tol=6.25
2024-12-09 07:35:38,731 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.5 pTM=0.355 ipTM=0.216 tol=7.25
2024-12-09 07:36:33,653 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.2 pTM=0.355 ipTM=0.203 tol=10.2
2024-12-09 07:37:28,690 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.4 pTM=0.348 ipTM=0.179 tol=12.6
2024-12-09 07:38:23,603 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.2 pTM=0.358 ipTM=0.217 tol=10.9
2024-12-09 07:39:18,477 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.8 pTM=0.355 ipTM=0.209 tol=5.64
2024-12-09 07:40:13,349 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59.6 pTM=0.357 ipTM=0.222 tol=7.54
2024-12-09 07:41:08,303 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59.8 pTM=0.363 ipTM=0.257 tol=5.69
2024-12-09 07:42:03,683 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.2 pTM=0.357 ipTM=0.214 tol=5.82
2024-12-09 07:42:58,841 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=59.6 pTM=0.358 ipTM=0.244 tol=3.94
2024-12-09 07:43:53,831 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.8 pTM=0.359 ipTM=0.239 tol=2.84
2024-12-09 07:43:53,833 alphafold2_multimer_v3_model_3_seed_000 took 1704.5s (30 recycles)
2024-12-09 07:44:50,605 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.5 pTM=0.372 ipTM=0.343
2024-12-09 07:45:45,598 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.9 pTM=0.464 ipTM=0.796 tol=20.7
2024-12-09 07:46:40,583 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.5 pTM=0.411 ipTM=0.574 tol=15.6
2024-12-09 07:47:35,771 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.5 pTM=0.396 ipTM=0.502 tol=8.46
2024-12-09 07:48:30,765 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56 pTM=0.375 ipTM=0.379 tol=10.3
2024-12-09 07:49:25,700 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.5 pTM=0.39 ipTM=0.465 tol=8.27
2024-12-09 07:50:20,803 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56 pTM=0.373 ipTM=0.367 tol=15.4
2024-12-09 07:51:16,003 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.4 pTM=0.383 ipTM=0.48 tol=21.6
2024-12-09 07:52:11,078 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.3 pTM=0.371 ipTM=0.38 tol=19.6
2024-12-09 07:53:06,218 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.8 pTM=0.395 ipTM=0.543 tol=8.49
2024-12-09 07:54:01,208 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.8 pTM=0.371 ipTM=0.393 tol=11.6
2024-12-09 07:54:56,190 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.7 pTM=0.385 ipTM=0.496 tol=7.18
2024-12-09 07:55:51,123 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.8 pTM=0.37 ipTM=0.372 tol=5.74
2024-12-09 07:56:46,095 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.4 pTM=0.378 ipTM=0.454 tol=4.88
2024-12-09 07:57:41,097 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.7 pTM=0.365 ipTM=0.365 tol=4.33
2024-12-09 07:58:36,082 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.6 pTM=0.371 ipTM=0.429 tol=7
2024-12-09 07:59:31,061 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.4 pTM=0.359 ipTM=0.355 tol=4.76
2024-12-09 08:00:26,043 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.4 pTM=0.372 ipTM=0.441 tol=3.94
2024-12-09 08:01:21,026 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.5 pTM=0.365 ipTM=0.383 tol=4.38
2024-12-09 08:02:16,031 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.1 pTM=0.359 ipTM=0.377 tol=3.66
2024-12-09 08:03:11,036 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.4 pTM=0.364 ipTM=0.371 tol=3.7
2024-12-09 08:04:06,029 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.1 pTM=0.356 ipTM=0.323 tol=3.84
2024-12-09 08:05:01,027 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.4 pTM=0.356 ipTM=0.325 tol=5.18
2024-12-09 08:05:56,024 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.2 pTM=0.357 ipTM=0.342 tol=6.23
2024-12-09 08:06:51,058 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.5 pTM=0.36 ipTM=0.327 tol=7.16
2024-12-09 08:07:46,076 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62 pTM=0.358 ipTM=0.313 tol=8.26
2024-12-09 08:08:41,104 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.6 pTM=0.368 ipTM=0.402 tol=7.25
2024-12-09 08:09:36,105 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.1 pTM=0.358 ipTM=0.357 tol=6.15
2024-12-09 08:10:31,133 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.4 pTM=0.362 ipTM=0.375 tol=6.35
2024-12-09 08:11:26,160 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.2 pTM=0.355 ipTM=0.329 tol=5.32
2024-12-09 08:12:21,177 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.7 pTM=0.367 ipTM=0.384 tol=3.29
2024-12-09 08:12:21,178 alphafold2_multimer_v3_model_4_seed_000 took 1705.6s (30 recycles)
2024-12-09 08:13:17,853 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.2 pTM=0.414 ipTM=0.581
2024-12-09 08:14:12,805 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.2 pTM=0.445 ipTM=0.736 tol=16.6
2024-12-09 08:15:07,752 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.4 pTM=0.421 ipTM=0.617 tol=25.3
2024-12-09 08:16:02,687 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.2 pTM=0.41 ipTM=0.564 tol=10.8
2024-12-09 08:16:57,630 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.2 pTM=0.402 ipTM=0.508 tol=5.96
2024-12-09 08:17:52,542 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.3 pTM=0.413 ipTM=0.544 tol=11.3
2024-12-09 08:18:47,412 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.6 pTM=0.413 ipTM=0.588 tol=6.37
2024-12-09 08:19:42,270 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.6 pTM=0.407 ipTM=0.554 tol=4.53
2024-12-09 08:20:37,118 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.5 pTM=0.406 ipTM=0.546 tol=3.12
2024-12-09 08:21:31,974 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.2 pTM=0.414 ipTM=0.566 tol=6.3
2024-12-09 08:22:26,878 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.3 pTM=0.407 ipTM=0.551 tol=5.38
2024-12-09 08:23:21,780 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.1 pTM=0.404 ipTM=0.55 tol=6.8
2024-12-09 08:24:16,684 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.3 pTM=0.402 ipTM=0.555 tol=6.8
2024-12-09 08:25:11,588 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.3 pTM=0.403 ipTM=0.552 tol=7.93
2024-12-09 08:26:06,446 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.6 pTM=0.403 ipTM=0.549 tol=5.56
2024-12-09 08:27:01,293 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.6 pTM=0.402 ipTM=0.549 tol=5.98
2024-12-09 08:27:56,167 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.5 pTM=0.401 ipTM=0.542 tol=4.25
2024-12-09 08:28:51,081 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.8 pTM=0.41 ipTM=0.557 tol=4.32
2024-12-09 08:29:45,986 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.7 pTM=0.407 ipTM=0.557 tol=11.3
2024-12-09 08:30:40,868 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.3 pTM=0.398 ipTM=0.545 tol=4.32
2024-12-09 08:31:35,782 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.9 pTM=0.394 ipTM=0.542 tol=4.46
2024-12-09 08:32:30,708 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.6 pTM=0.391 ipTM=0.547 tol=7.12
2024-12-09 08:33:25,635 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.2 pTM=0.39 ipTM=0.535 tol=6.88
2024-12-09 08:34:20,598 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60 pTM=0.39 ipTM=0.535 tol=4.37
2024-12-09 08:35:15,590 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.5 pTM=0.381 ipTM=0.519 tol=6.11
2024-12-09 08:36:10,545 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.8 pTM=0.386 ipTM=0.527 tol=6.18
2024-12-09 08:37:05,490 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.8 pTM=0.382 ipTM=0.531 tol=4.5
2024-12-09 08:38:00,423 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.9 pTM=0.389 ipTM=0.521 tol=6.95
2024-12-09 08:38:55,380 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.8 pTM=0.381 ipTM=0.537 tol=4.32
2024-12-09 08:39:50,322 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.8 pTM=0.405 ipTM=0.543 tol=7.25
2024-12-09 08:40:45,277 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.2 pTM=0.392 ipTM=0.543 tol=4.9
2024-12-09 08:40:45,278 alphafold2_multimer_v3_model_5_seed_000 took 1702.3s (30 recycles)
2024-12-09 08:40:47,069 reranking models by 'multimer' metric
2024-12-09 08:40:51,212 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 08:46:01,014 Relaxation took 313.9s
2024-12-09 08:46:01,014 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.9 pTM=0.401 ipTM=0.559
2024-12-09 08:50:58,385 Relaxation took 297.4s
2024-12-09 08:50:58,385 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.2 pTM=0.392 ipTM=0.543
2024-12-09 08:55:04,101 Relaxation took 245.7s
2024-12-09 08:55:04,102 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.6 pTM=0.39 ipTM=0.395
2024-12-09 08:59:07,031 Relaxation took 242.9s
2024-12-09 08:59:07,032 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.7 pTM=0.367 ipTM=0.384
2024-12-09 09:03:35,326 Relaxation took 268.3s
2024-12-09 09:03:35,326 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.8 pTM=0.359 ipTM=0.239
2024-12-09 09:03:39,299 Done