2024-12-09 06:19:38,519 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 06:19:38,818 Running on GPU
2024-12-09 06:19:41,354 Found 6 citations for tools or databases
2024-12-09 06:19:41,354 Query 1/1: TRPC4AP_KDM4D (length 1320)
2024-12-09 06:19:41,617 Sleeping for 6s. Reason: PENDING
2024-12-09 06:19:47,876 Sleeping for 8s. Reason: PENDING
2024-12-09 06:19:56,134 Sleeping for 6s. Reason: PENDING
2024-12-09 06:20:02,390 Sleeping for 7s. Reason: PENDING
2024-12-09 06:20:09,645 Sleeping for 7s. Reason: PENDING
2024-12-09 06:20:16,899 Sleeping for 9s. Reason: PENDING
2024-12-09 06:20:26,158 Sleeping for 5s. Reason: PENDING
2024-12-09 06:20:31,407 Sleeping for 7s. Reason: PENDING
2024-12-09 06:20:38,665 Sleeping for 8s. Reason: PENDING
2024-12-09 06:20:46,923 Sleeping for 6s. Reason: PENDING
2024-12-09 06:20:53,176 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:21:01,429 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:21:10,688 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:21:15,941 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:21:21,191 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:21:28,444 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:21:38,713 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:21:46,982 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:21:55,245 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:22:02,507 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:22:09,769 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:22:16,023 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:22:24,282 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:22:30,536 Sleeping for 8s. Reason: RUNNING
2024-12-09 06:22:40,337 Sleeping for 6s. Reason: PENDING
2024-12-09 06:22:46,593 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:22:52,851 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:22:59,103 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:23:09,367 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:23:14,619 Sleeping for 6s. Reason: RUNNING
2024-12-09 06:23:20,871 Sleeping for 7s. Reason: RUNNING
2024-12-09 06:23:28,129 Sleeping for 9s. Reason: RUNNING
2024-12-09 06:23:37,390 Sleeping for 5s. Reason: RUNNING
2024-12-09 06:23:42,649 Sleeping for 10s. Reason: RUNNING
2024-12-09 06:23:55,141 Setting max_seq=508, max_extra_seq=2048
2024-12-09 06:26:33,323 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70 pTM=0.544 ipTM=0.182
2024-12-09 06:27:17,216 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.4 pTM=0.562 ipTM=0.193 tol=12.5
2024-12-09 06:28:01,218 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.9 pTM=0.562 ipTM=0.209 tol=7.54
2024-12-09 06:28:45,330 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.9 pTM=0.565 ipTM=0.208 tol=5.46
2024-12-09 06:29:29,461 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.8 pTM=0.564 ipTM=0.217 tol=4.64
2024-12-09 06:30:13,673 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.8 pTM=0.566 ipTM=0.212 tol=1.79
2024-12-09 06:30:57,846 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.8 pTM=0.564 ipTM=0.214 tol=3.12
2024-12-09 06:31:42,047 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.9 pTM=0.564 ipTM=0.221 tol=1.61
2024-12-09 06:32:26,242 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.9 pTM=0.563 ipTM=0.221 tol=1.18
2024-12-09 06:33:10,435 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71 pTM=0.563 ipTM=0.22 tol=1.67
2024-12-09 06:33:54,608 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.1 pTM=0.564 ipTM=0.224 tol=1.63
2024-12-09 06:34:38,817 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.9 pTM=0.563 ipTM=0.218 tol=1.82
2024-12-09 06:35:22,977 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71 pTM=0.562 ipTM=0.22 tol=1.16
2024-12-09 06:36:07,157 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.8 pTM=0.56 ipTM=0.213 tol=1.07
2024-12-09 06:36:51,336 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.9 pTM=0.564 ipTM=0.214 tol=2.44
2024-12-09 06:37:35,524 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.9 pTM=0.561 ipTM=0.208 tol=3.13
2024-12-09 06:38:19,673 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.9 pTM=0.563 ipTM=0.212 tol=2.91
2024-12-09 06:39:03,862 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.9 pTM=0.561 ipTM=0.217 tol=3.3
2024-12-09 06:39:48,063 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71 pTM=0.564 ipTM=0.219 tol=4.5
2024-12-09 06:40:32,245 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.9 pTM=0.559 ipTM=0.219 tol=4.04
2024-12-09 06:41:16,428 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.6 pTM=0.562 ipTM=0.213 tol=1.78
2024-12-09 06:42:00,607 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.8 pTM=0.558 ipTM=0.208 tol=1.3
2024-12-09 06:42:44,811 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.8 pTM=0.559 ipTM=0.208 tol=1.49
2024-12-09 06:43:29,032 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.9 pTM=0.561 ipTM=0.208 tol=1.62
2024-12-09 06:44:13,194 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.8 pTM=0.56 ipTM=0.208 tol=1.92
2024-12-09 06:44:57,414 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.9 pTM=0.561 ipTM=0.204 tol=4.73
2024-12-09 06:45:41,602 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.8 pTM=0.562 ipTM=0.211 tol=3.85
2024-12-09 06:46:25,763 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.7 pTM=0.558 ipTM=0.205 tol=2.64
2024-12-09 06:47:09,922 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.7 pTM=0.562 ipTM=0.212 tol=3.56
2024-12-09 06:47:54,087 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.8 pTM=0.559 ipTM=0.207 tol=2.58
2024-12-09 06:48:38,252 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.7 pTM=0.561 ipTM=0.21 tol=3.88
2024-12-09 06:48:38,253 alphafold2_multimer_v3_model_1_seed_000 took 1478.2s (30 recycles)
2024-12-09 06:49:23,576 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.2 pTM=0.567 ipTM=0.204
2024-12-09 06:50:07,856 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.6 pTM=0.559 ipTM=0.202 tol=8.16
2024-12-09 06:50:52,150 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.1 pTM=0.567 ipTM=0.197 tol=5.11
2024-12-09 06:51:36,381 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.9 pTM=0.561 ipTM=0.202 tol=4.5
2024-12-09 06:52:20,592 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.9 pTM=0.558 ipTM=0.203 tol=2.95
2024-12-09 06:53:04,831 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.1 pTM=0.562 ipTM=0.209 tol=6.3
2024-12-09 06:53:49,076 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.2 pTM=0.559 ipTM=0.203 tol=3.8
2024-12-09 06:54:33,312 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.1 pTM=0.56 ipTM=0.206 tol=2.92
2024-12-09 06:55:17,552 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.1 pTM=0.56 ipTM=0.206 tol=1.65
2024-12-09 06:56:01,840 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.2 pTM=0.561 ipTM=0.204 tol=2.81
2024-12-09 06:56:46,139 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.1 pTM=0.559 ipTM=0.2 tol=4.51
2024-12-09 06:57:30,445 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.2 pTM=0.559 ipTM=0.201 tol=8.54
2024-12-09 06:58:14,755 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.3 pTM=0.56 ipTM=0.201 tol=2.28
2024-12-09 06:58:59,036 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71 pTM=0.559 ipTM=0.202 tol=2.65
2024-12-09 06:59:43,341 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.2 pTM=0.56 ipTM=0.203 tol=3.08
2024-12-09 07:00:27,623 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.1 pTM=0.557 ipTM=0.202 tol=3.95
2024-12-09 07:01:11,906 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.1 pTM=0.56 ipTM=0.207 tol=8.4
2024-12-09 07:01:56,214 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71 pTM=0.557 ipTM=0.202 tol=2.15
2024-12-09 07:02:40,499 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.2 pTM=0.562 ipTM=0.207 tol=1.02
2024-12-09 07:03:24,730 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.9 pTM=0.557 ipTM=0.201 tol=1.9
2024-12-09 07:04:08,941 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.8 pTM=0.558 ipTM=0.202 tol=3.07
2024-12-09 07:04:53,155 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.8 pTM=0.555 ipTM=0.197 tol=2.16
2024-12-09 07:05:37,365 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71 pTM=0.559 ipTM=0.202 tol=2.38
2024-12-09 07:06:21,600 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.1 pTM=0.558 ipTM=0.205 tol=5.59
2024-12-09 07:07:05,836 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.9 pTM=0.556 ipTM=0.198 tol=4.27
2024-12-09 07:07:50,093 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.1 pTM=0.559 ipTM=0.203 tol=3.03
2024-12-09 07:08:34,344 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.1 pTM=0.557 ipTM=0.198 tol=4.5
2024-12-09 07:09:18,638 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71 pTM=0.552 ipTM=0.195 tol=6.78
2024-12-09 07:10:02,924 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.1 pTM=0.56 ipTM=0.203 tol=3.01
2024-12-09 07:10:47,168 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71 pTM=0.556 ipTM=0.196 tol=3.28
2024-12-09 07:11:31,412 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.2 pTM=0.561 ipTM=0.203 tol=2.06
2024-12-09 07:11:31,413 alphafold2_multimer_v3_model_2_seed_000 took 1372.1s (30 recycles)
2024-12-09 07:12:16,882 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.2 pTM=0.553 ipTM=0.181
2024-12-09 07:13:01,386 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.5 pTM=0.534 ipTM=0.165 tol=21.7
2024-12-09 07:13:45,736 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.3 pTM=0.567 ipTM=0.224 tol=18.2
2024-12-09 07:14:30,073 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.5 pTM=0.568 ipTM=0.218 tol=6.54
2024-12-09 07:15:14,376 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.8 pTM=0.578 ipTM=0.232 tol=6.68
2024-12-09 07:15:58,705 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.5 pTM=0.566 ipTM=0.217 tol=3.73
2024-12-09 07:16:42,962 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.6 pTM=0.575 ipTM=0.232 tol=4.11
2024-12-09 07:17:27,212 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.6 pTM=0.569 ipTM=0.223 tol=3.92
2024-12-09 07:18:11,462 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.7 pTM=0.58 ipTM=0.244 tol=2.66
2024-12-09 07:18:55,761 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.9 pTM=0.571 ipTM=0.224 tol=3.16
2024-12-09 07:19:40,013 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.8 pTM=0.581 ipTM=0.245 tol=2.35
2024-12-09 07:20:24,331 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.3 pTM=0.572 ipTM=0.223 tol=5.31
2024-12-09 07:21:08,658 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.6 pTM=0.582 ipTM=0.25 tol=5.12
2024-12-09 07:21:53,039 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.6 pTM=0.568 ipTM=0.218 tol=2.87
2024-12-09 07:22:37,313 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.6 pTM=0.584 ipTM=0.254 tol=5.02
2024-12-09 07:23:21,614 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.7 pTM=0.566 ipTM=0.215 tol=4.75
2024-12-09 07:24:05,894 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.5 pTM=0.583 ipTM=0.252 tol=4.39
2024-12-09 07:24:50,205 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.6 pTM=0.565 ipTM=0.212 tol=3.51
2024-12-09 07:25:34,522 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.5 pTM=0.581 ipTM=0.246 tol=3.39
2024-12-09 07:26:18,849 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.4 pTM=0.563 ipTM=0.213 tol=3.51
2024-12-09 07:27:03,161 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.6 pTM=0.582 ipTM=0.246 tol=3.76
2024-12-09 07:27:47,456 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.4 pTM=0.562 ipTM=0.209 tol=4.17
2024-12-09 07:28:31,790 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.7 pTM=0.581 ipTM=0.243 tol=2.84
2024-12-09 07:29:16,081 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.6 pTM=0.566 ipTM=0.217 tol=2.72
2024-12-09 07:30:00,353 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.4 pTM=0.581 ipTM=0.248 tol=3.69
2024-12-09 07:30:44,663 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.4 pTM=0.564 ipTM=0.211 tol=3.17
2024-12-09 07:31:28,899 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.6 pTM=0.586 ipTM=0.257 tol=3.13
2024-12-09 07:32:13,177 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.5 pTM=0.565 ipTM=0.215 tol=2.32
2024-12-09 07:32:57,412 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.4 pTM=0.585 ipTM=0.253 tol=2.25
2024-12-09 07:33:41,682 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.6 pTM=0.568 ipTM=0.218 tol=2.11
2024-12-09 07:34:25,930 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.6 pTM=0.586 ipTM=0.258 tol=2.08
2024-12-09 07:34:25,931 alphafold2_multimer_v3_model_3_seed_000 took 1373.5s (30 recycles)
2024-12-09 07:35:11,384 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69 pTM=0.571 ipTM=0.197
2024-12-09 07:35:55,779 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.7 pTM=0.565 ipTM=0.188 tol=11.6
2024-12-09 07:36:40,124 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.6 pTM=0.573 ipTM=0.188 tol=8.21
2024-12-09 07:37:24,499 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.7 pTM=0.567 ipTM=0.187 tol=4.81
2024-12-09 07:38:08,872 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.6 pTM=0.568 ipTM=0.19 tol=3.2
2024-12-09 07:38:53,264 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.4 pTM=0.567 ipTM=0.192 tol=3.41
2024-12-09 07:39:37,636 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.4 pTM=0.564 ipTM=0.187 tol=5.46
2024-12-09 07:40:22,047 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.4 pTM=0.565 ipTM=0.191 tol=4.25
2024-12-09 07:41:06,464 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.5 pTM=0.564 ipTM=0.19 tol=2
2024-12-09 07:41:50,877 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.566 ipTM=0.193 tol=3.12
2024-12-09 07:42:35,286 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.4 pTM=0.566 ipTM=0.191 tol=3.07
2024-12-09 07:43:19,677 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.564 ipTM=0.189 tol=3.51
2024-12-09 07:44:04,062 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.4 pTM=0.565 ipTM=0.19 tol=2.78
2024-12-09 07:44:48,404 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.2 pTM=0.563 ipTM=0.192 tol=3.35
2024-12-09 07:45:32,814 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.3 pTM=0.567 ipTM=0.194 tol=3.61
2024-12-09 07:46:17,154 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.1 pTM=0.564 ipTM=0.192 tol=5.08
2024-12-09 07:47:01,541 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.2 pTM=0.567 ipTM=0.198 tol=5.09
2024-12-09 07:47:45,862 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70 pTM=0.562 ipTM=0.192 tol=6.31
2024-12-09 07:48:30,201 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.1 pTM=0.567 ipTM=0.198 tol=4.1
2024-12-09 07:49:14,517 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.9 pTM=0.562 ipTM=0.195 tol=4.29
2024-12-09 07:49:58,866 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70 pTM=0.567 ipTM=0.2 tol=3.23
2024-12-09 07:50:43,203 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70 pTM=0.564 ipTM=0.196 tol=3.78
2024-12-09 07:51:27,575 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.1 pTM=0.567 ipTM=0.196 tol=5.48
2024-12-09 07:52:11,932 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.1 pTM=0.564 ipTM=0.193 tol=5.08
2024-12-09 07:52:56,285 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.1 pTM=0.565 ipTM=0.194 tol=4.47
2024-12-09 07:53:40,611 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.1 pTM=0.561 ipTM=0.188 tol=3.78
2024-12-09 07:54:24,991 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.2 pTM=0.567 ipTM=0.195 tol=3.62
2024-12-09 07:55:09,323 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.8 pTM=0.56 ipTM=0.191 tol=3.73
2024-12-09 07:55:53,661 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.9 pTM=0.565 ipTM=0.195 tol=3.49
2024-12-09 07:56:38,036 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=69.9 pTM=0.562 ipTM=0.192 tol=4.13
2024-12-09 07:57:22,398 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.1 pTM=0.568 ipTM=0.199 tol=4.56
2024-12-09 07:57:22,399 alphafold2_multimer_v3_model_4_seed_000 took 1375.4s (30 recycles)
2024-12-09 07:58:07,843 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.9 pTM=0.546 ipTM=0.181
2024-12-09 07:58:52,244 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.6 pTM=0.554 ipTM=0.189 tol=8.7
2024-12-09 07:59:36,623 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.7 pTM=0.55 ipTM=0.178 tol=6.05
2024-12-09 08:00:20,973 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.7 pTM=0.566 ipTM=0.187 tol=4.98
2024-12-09 08:01:05,309 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.6 pTM=0.558 ipTM=0.18 tol=3.62
2024-12-09 08:01:49,625 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.4 pTM=0.566 ipTM=0.198 tol=4.76
2024-12-09 08:02:33,922 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.3 pTM=0.559 ipTM=0.191 tol=4.95
2024-12-09 08:03:18,256 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.4 pTM=0.562 ipTM=0.19 tol=4.15
2024-12-09 08:04:02,593 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.4 pTM=0.561 ipTM=0.19 tol=3.23
2024-12-09 08:04:46,933 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.8 pTM=0.569 ipTM=0.2 tol=6.78
2024-12-09 08:05:31,290 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.7 pTM=0.561 ipTM=0.187 tol=3.2
2024-12-09 08:06:15,647 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.6 pTM=0.567 ipTM=0.197 tol=2.91
2024-12-09 08:07:00,007 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.5 pTM=0.562 ipTM=0.195 tol=2.58
2024-12-09 08:07:44,399 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.6 pTM=0.567 ipTM=0.198 tol=1.58
2024-12-09 08:08:28,774 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.4 pTM=0.564 ipTM=0.197 tol=1.68
2024-12-09 08:09:13,122 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.4 pTM=0.564 ipTM=0.197 tol=0.889
2024-12-09 08:09:57,479 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.4 pTM=0.564 ipTM=0.199 tol=1.09
2024-12-09 08:10:41,819 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.5 pTM=0.567 ipTM=0.2 tol=1.45
2024-12-09 08:11:26,167 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.5 pTM=0.565 ipTM=0.2 tol=1.64
2024-12-09 08:12:10,487 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.3 pTM=0.563 ipTM=0.198 tol=1.7
2024-12-09 08:12:54,833 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.5 pTM=0.564 ipTM=0.193 tol=2.04
2024-12-09 08:13:39,137 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.2 pTM=0.564 ipTM=0.197 tol=1.61
2024-12-09 08:14:23,480 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.6 pTM=0.561 ipTM=0.186 tol=5.55
2024-12-09 08:15:07,793 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.6 pTM=0.568 ipTM=0.201 tol=4.9
2024-12-09 08:15:52,081 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.1 pTM=0.56 ipTM=0.196 tol=2.16
2024-12-09 08:16:36,368 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.4 pTM=0.569 ipTM=0.2 tol=1.62
2024-12-09 08:17:20,702 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.4 pTM=0.564 ipTM=0.199 tol=1.54
2024-12-09 08:18:04,977 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.3 pTM=0.564 ipTM=0.195 tol=1.99
2024-12-09 08:18:49,275 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.2 pTM=0.562 ipTM=0.196 tol=1.92
2024-12-09 08:19:33,574 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.4 pTM=0.565 ipTM=0.195 tol=0.979
2024-12-09 08:20:17,843 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.1 pTM=0.562 ipTM=0.201 tol=1.33
2024-12-09 08:20:17,844 alphafold2_multimer_v3_model_5_seed_000 took 1374.4s (30 recycles)
2024-12-09 08:20:18,883 reranking models by 'multimer' metric
2024-12-09 08:20:22,774 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 08:22:40,119 Relaxation took 141.2s
2024-12-09 08:22:40,120 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.6 pTM=0.586 ipTM=0.258
2024-12-09 08:25:33,777 Relaxation took 173.7s
2024-12-09 08:25:33,777 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.7 pTM=0.561 ipTM=0.21
2024-12-09 08:27:59,427 Relaxation took 145.6s
2024-12-09 08:27:59,428 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.2 pTM=0.561 ipTM=0.203
2024-12-09 08:30:08,346 Relaxation took 128.9s
2024-12-09 08:30:08,346 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.1 pTM=0.562 ipTM=0.201
2024-12-09 08:32:37,472 Relaxation took 149.1s
2024-12-09 08:32:37,472 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.1 pTM=0.568 ipTM=0.199
2024-12-09 08:32:40,124 Done