2024-12-09 07:19:47,053 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 07:19:47,364 Running on GPU
2024-12-09 07:19:48,465 Found 6 citations for tools or databases
2024-12-09 07:19:48,465 Query 1/1: TULP4_DLG1 (length 2447)
2024-12-09 07:19:48,931 Sleeping for 6s. Reason: PENDING
2024-12-09 07:19:55,184 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:20:03,443 Sleeping for 8s. Reason: RUNNING
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2024-12-09 07:20:21,959 Sleeping for 6s. Reason: RUNNING
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2024-12-09 07:21:01,243 Sleeping for 6s. Reason: RUNNING
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2024-12-09 07:21:33,281 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:21:39,533 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:21:44,782 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:21:55,045 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:22:00,296 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:22:10,556 Sleeping for 7s. Reason: RUNNING
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2024-12-09 07:22:25,064 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:22:31,322 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:22:37,586 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:22:42,845 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:22:48,094 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:22:53,356 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:22:59,622 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:23:04,882 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:23:15,138 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:23:24,403 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:23:30,658 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:23:35,907 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:23:42,169 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:23:52,426 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:24:02,690 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:24:08,945 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:24:14,203 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:24:20,460 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:24:29,716 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:24:36,974 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:24:43,230 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:24:51,490 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:24:59,745 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:04,999 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:10,253 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:15,510 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:25:23,766 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:29,021 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:34,281 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:39,542 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:25:44,799 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:25:52,061 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:26:00,314 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:26:08,704 Sleeping for 7s. Reason: PENDING
2024-12-09 07:26:15,957 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:26:21,213 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:26:26,617 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:26:36,877 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:26:45,139 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:26:54,399 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:27:01,657 Sleeping for 5s. Reason: RUNNING
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2024-12-09 07:27:15,165 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:27:21,422 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:27:26,683 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:27:31,937 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:27:40,204 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:27:46,454 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:27:51,714 Sleeping for 8s. Reason: RUNNING
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2024-12-09 07:28:09,238 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:28:18,494 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:28:27,749 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:28:35,002 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:28:43,257 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:28:53,514 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:29:01,771 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:29:10,025 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:29:15,276 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:29:21,533 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:29:27,786 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:29:34,044 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:29:40,294 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:29:50,564 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:29:56,819 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:30:02,073 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:30:12,341 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:30:22,601 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:30:29,858 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:30:37,110 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:30:43,368 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:30:57,985 Setting max_seq=508, max_extra_seq=2048
2024-12-09 07:38:39,375 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.1 pTM=0.394 ipTM=0.247
2024-12-09 07:43:20,179 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.8 pTM=0.409 ipTM=0.259 tol=23
2024-12-09 07:48:00,984 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.4 pTM=0.406 ipTM=0.281 tol=18.7
2024-12-09 07:52:41,772 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.2 pTM=0.406 ipTM=0.274 tol=20.9
2024-12-09 07:57:22,694 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=45.5 pTM=0.403 ipTM=0.272 tol=16.7
2024-12-09 08:02:03,479 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45.7 pTM=0.405 ipTM=0.268 tol=11.8
2024-12-09 08:06:44,277 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45.8 pTM=0.405 ipTM=0.267 tol=8.2
2024-12-09 08:11:25,152 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.9 pTM=0.405 ipTM=0.269 tol=8.73
2024-12-09 08:16:06,025 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.6 pTM=0.405 ipTM=0.269 tol=7.57
2024-12-09 08:20:46,780 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.9 pTM=0.405 ipTM=0.27 tol=6.77
2024-12-09 08:25:27,591 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.6 pTM=0.405 ipTM=0.27 tol=6.96
2024-12-09 08:30:08,340 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=45.7 pTM=0.405 ipTM=0.269 tol=7.52
2024-12-09 08:34:49,215 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.8 pTM=0.405 ipTM=0.265 tol=6.96
2024-12-09 08:39:30,013 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.8 pTM=0.404 ipTM=0.258 tol=6.14
2024-12-09 08:44:10,744 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=45.6 pTM=0.405 ipTM=0.254 tol=7.87
2024-12-09 08:48:51,517 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45.7 pTM=0.404 ipTM=0.256 tol=5.96
2024-12-09 08:53:32,311 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.9 pTM=0.404 ipTM=0.245 tol=5.82
2024-12-09 08:58:12,964 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.6 pTM=0.404 ipTM=0.245 tol=5.99
2024-12-09 09:02:53,867 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.7 pTM=0.405 ipTM=0.249 tol=8
2024-12-09 09:07:34,739 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.7 pTM=0.407 ipTM=0.251 tol=13.6
2024-12-09 09:12:15,648 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.9 pTM=0.405 ipTM=0.249 tol=12
2024-12-09 09:16:56,485 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.7 pTM=0.406 ipTM=0.248 tol=8.28
2024-12-09 09:21:37,379 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.6 pTM=0.406 ipTM=0.248 tol=8.53
2024-12-09 09:26:18,211 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45.2 pTM=0.405 ipTM=0.248 tol=16.9
2024-12-09 09:30:59,123 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.6 pTM=0.407 ipTM=0.251 tol=12
2024-12-09 09:35:39,960 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.8 pTM=0.404 ipTM=0.243 tol=8.16
2024-12-09 09:40:20,777 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45.7 pTM=0.406 ipTM=0.248 tol=12.2
2024-12-09 09:45:01,584 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.7 pTM=0.405 ipTM=0.246 tol=7.92
2024-12-09 09:49:42,456 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.9 pTM=0.406 ipTM=0.249 tol=7.65
2024-12-09 09:54:23,276 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.8 pTM=0.406 ipTM=0.248 tol=7.45
2024-12-09 09:59:04,082 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.8 pTM=0.407 ipTM=0.251 tol=8.45
2024-12-09 09:59:04,085 alphafold2_multimer_v3_model_1_seed_000 took 8881.1s (30 recycles)
2024-12-09 10:03:48,156 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.1 pTM=0.407 ipTM=0.25
2024-12-09 10:08:29,150 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48 pTM=0.41 ipTM=0.243 tol=20
2024-12-09 10:13:10,112 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.2 pTM=0.41 ipTM=0.287 tol=18.6
2024-12-09 10:17:51,178 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.5 pTM=0.409 ipTM=0.276 tol=12.7
2024-12-09 10:22:32,138 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.2 pTM=0.408 ipTM=0.269 tol=10.8
2024-12-09 10:27:13,264 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.4 pTM=0.406 ipTM=0.262 tol=9.59
2024-12-09 10:31:54,315 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.3 pTM=0.405 ipTM=0.261 tol=8.23
2024-12-09 10:36:35,376 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.4 pTM=0.404 ipTM=0.258 tol=8.3
2024-12-09 10:41:16,470 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.4 pTM=0.404 ipTM=0.256 tol=7.54
2024-12-09 10:45:57,535 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.4 pTM=0.404 ipTM=0.259 tol=6.31
2024-12-09 10:50:38,570 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.5 pTM=0.405 ipTM=0.259 tol=6.61
2024-12-09 10:55:19,609 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.6 pTM=0.406 ipTM=0.259 tol=10.9
2024-12-09 11:00:00,779 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.7 pTM=0.406 ipTM=0.261 tol=8.27
2024-12-09 11:04:41,899 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.6 pTM=0.406 ipTM=0.262 tol=8.31
2024-12-09 11:09:23,078 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.6 pTM=0.406 ipTM=0.263 tol=6.88
2024-12-09 11:14:04,253 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.5 pTM=0.405 ipTM=0.261 tol=6.41
2024-12-09 11:18:45,391 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.7 pTM=0.406 ipTM=0.26 tol=9.62
2024-12-09 11:23:26,471 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.5 pTM=0.406 ipTM=0.259 tol=10.1
2024-12-09 11:28:07,623 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.5 pTM=0.406 ipTM=0.265 tol=9.32
2024-12-09 11:32:48,710 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.5 pTM=0.406 ipTM=0.263 tol=10.7
2024-12-09 11:37:29,854 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.5 pTM=0.405 ipTM=0.266 tol=10.6
2024-12-09 11:42:11,018 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.6 pTM=0.406 ipTM=0.268 tol=11.2
2024-12-09 11:46:52,140 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.5 pTM=0.405 ipTM=0.264 tol=9.13
2024-12-09 11:51:33,202 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.5 pTM=0.406 ipTM=0.27 tol=8.52
2024-12-09 11:56:14,267 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.6 pTM=0.406 ipTM=0.269 tol=5.04
2024-12-09 12:00:55,369 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.6 pTM=0.408 ipTM=0.27 tol=7.12
2024-12-09 12:05:36,421 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.6 pTM=0.407 ipTM=0.271 tol=6.48
2024-12-09 12:10:17,554 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.5 pTM=0.407 ipTM=0.271 tol=6.35
2024-12-09 12:14:58,655 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.6 pTM=0.408 ipTM=0.268 tol=7.6
2024-12-09 12:19:39,612 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.5 pTM=0.409 ipTM=0.269 tol=9.19
2024-12-09 12:24:20,635 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.5 pTM=0.409 ipTM=0.266 tol=8.15
2024-12-09 12:24:20,638 alphafold2_multimer_v3_model_2_seed_000 took 8713.1s (30 recycles)
2024-12-09 12:29:05,425 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45 pTM=0.401 ipTM=0.282
2024-12-09 12:33:47,149 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.3 pTM=0.404 ipTM=0.227 tol=20.8
2024-12-09 12:38:28,801 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47 pTM=0.402 ipTM=0.228 tol=19.7
2024-12-09 12:43:10,528 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.2 pTM=0.401 ipTM=0.227 tol=17.1
2024-12-09 12:47:52,092 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.9 pTM=0.403 ipTM=0.228 tol=12.8
2024-12-09 12:52:33,647 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.1 pTM=0.403 ipTM=0.241 tol=19.1
2024-12-09 12:57:15,253 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47 pTM=0.405 ipTM=0.248 tol=18
2024-12-09 13:01:56,910 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.1 pTM=0.403 ipTM=0.234 tol=18
2024-12-09 13:06:38,546 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47 pTM=0.404 ipTM=0.233 tol=14.3
2024-12-09 13:11:20,198 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.4 pTM=0.403 ipTM=0.255 tol=15.7
2024-12-09 13:16:01,837 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=47.3 pTM=0.403 ipTM=0.256 tol=8.05
2024-12-09 13:20:43,505 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.3 pTM=0.402 ipTM=0.219 tol=12.9
2024-12-09 13:25:25,312 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.4 pTM=0.401 ipTM=0.256 tol=18.3
2024-12-09 13:30:07,055 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=47.3 pTM=0.4 ipTM=0.253 tol=18.2
2024-12-09 13:34:48,770 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.1 pTM=0.401 ipTM=0.219 tol=15.1
2024-12-09 13:39:30,448 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.2 pTM=0.401 ipTM=0.255 tol=11.2
2024-12-09 13:44:12,090 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=47.4 pTM=0.401 ipTM=0.264 tol=13.1
2024-12-09 13:48:53,673 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.1 pTM=0.401 ipTM=0.245 tol=11.5
2024-12-09 13:53:35,436 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.3 pTM=0.401 ipTM=0.263 tol=12.4
2024-12-09 13:58:17,110 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=47.2 pTM=0.402 ipTM=0.239 tol=9.87
2024-12-09 14:02:58,702 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=47.2 pTM=0.402 ipTM=0.258 tol=12.4
2024-12-09 14:07:40,323 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=47.5 pTM=0.401 ipTM=0.267 tol=12.5
2024-12-09 14:12:21,990 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=47.1 pTM=0.401 ipTM=0.228 tol=13.1
2024-12-09 14:17:03,605 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=47.3 pTM=0.4 ipTM=0.26 tol=14.6
2024-12-09 14:21:45,174 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.9 pTM=0.402 ipTM=0.229 tol=15
2024-12-09 14:26:26,797 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=47.1 pTM=0.401 ipTM=0.216 tol=17
2024-12-09 14:31:08,538 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.9 pTM=0.401 ipTM=0.241 tol=16.6
2024-12-09 14:35:50,322 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=47.2 pTM=0.401 ipTM=0.265 tol=15.1
2024-12-09 14:40:32,076 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=47.2 pTM=0.402 ipTM=0.219 tol=14.3
2024-12-09 14:45:13,739 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.2 pTM=0.402 ipTM=0.235 tol=9.65
2024-12-09 14:49:55,323 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=47.4 pTM=0.402 ipTM=0.273 tol=10.7
2024-12-09 14:49:55,326 alphafold2_multimer_v3_model_3_seed_000 took 8731.3s (30 recycles)
2024-12-09 14:54:40,322 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.8 pTM=0.398 ipTM=0.235
2024-12-09 14:59:22,208 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.8 pTM=0.403 ipTM=0.27 tol=19.4
2024-12-09 15:04:04,088 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46 pTM=0.403 ipTM=0.275 tol=18.6
2024-12-09 15:08:45,894 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.6 pTM=0.41 ipTM=0.274 tol=13.2
2024-12-09 15:13:27,945 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.4 pTM=0.404 ipTM=0.269 tol=10.9
2024-12-09 15:18:10,058 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.1 pTM=0.402 ipTM=0.261 tol=8.75
2024-12-09 15:22:52,112 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.1 pTM=0.402 ipTM=0.265 tol=9.16
2024-12-09 15:27:34,206 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.4 pTM=0.404 ipTM=0.263 tol=8.24
2024-12-09 15:32:16,424 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.7 pTM=0.408 ipTM=0.267 tol=7.36
2024-12-09 15:36:58,491 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.5 pTM=0.405 ipTM=0.267 tol=6.7
2024-12-09 15:41:40,604 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.4 pTM=0.403 ipTM=0.269 tol=7.53
2024-12-09 15:46:22,734 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.4 pTM=0.402 ipTM=0.266 tol=12.3
2024-12-09 15:51:04,822 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.4 pTM=0.403 ipTM=0.26 tol=12.4
2024-12-09 15:55:46,957 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.4 pTM=0.403 ipTM=0.259 tol=8.8
2024-12-09 16:00:29,123 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.6 pTM=0.404 ipTM=0.262 tol=9.42
2024-12-09 16:05:11,248 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.3 pTM=0.403 ipTM=0.259 tol=9.12
2024-12-09 16:09:53,406 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.5 pTM=0.402 ipTM=0.263 tol=7.68
2024-12-09 16:14:35,521 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.5 pTM=0.403 ipTM=0.26 tol=7.04
2024-12-09 16:19:17,534 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.4 pTM=0.406 ipTM=0.266 tol=11.9
2024-12-09 16:23:59,424 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.2 pTM=0.405 ipTM=0.266 tol=11.7
2024-12-09 16:28:41,541 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.1 pTM=0.402 ipTM=0.266 tol=8.33
2024-12-09 16:33:23,599 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.2 pTM=0.406 ipTM=0.264 tol=9.79
2024-12-09 16:38:05,650 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.5 pTM=0.413 ipTM=0.268 tol=7.82
2024-12-09 16:42:47,732 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.5 pTM=0.408 ipTM=0.26 tol=6.48
2024-12-09 16:47:29,804 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.3 pTM=0.404 ipTM=0.264 tol=8.21
2024-12-09 16:52:11,766 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.5 pTM=0.405 ipTM=0.28 tol=12.5
2024-12-09 16:56:53,815 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.7 pTM=0.406 ipTM=0.285 tol=7.71
2024-12-09 17:01:35,857 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.6 pTM=0.406 ipTM=0.286 tol=9.71
2024-12-09 17:06:17,877 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.5 pTM=0.405 ipTM=0.282 tol=11.6
2024-12-09 17:10:59,955 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.5 pTM=0.408 ipTM=0.285 tol=18.3
2024-12-09 17:15:42,057 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.4 pTM=0.406 ipTM=0.282 tol=15.9
2024-12-09 17:15:42,060 alphafold2_multimer_v3_model_4_seed_000 took 8743.3s (30 recycles)
2024-12-09 17:20:26,829 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.4 pTM=0.396 ipTM=0.218
2024-12-09 17:25:08,496 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.5 pTM=0.408 ipTM=0.234 tol=19.9
2024-12-09 17:29:49,973 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.7 pTM=0.403 ipTM=0.23 tol=16.2
2024-12-09 17:34:31,268 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.1 pTM=0.426 ipTM=0.296 tol=16.1
2024-12-09 17:39:12,480 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.2 pTM=0.41 ipTM=0.242 tol=16
2024-12-09 17:43:53,896 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.2 pTM=0.411 ipTM=0.247 tol=15.5
2024-12-09 17:48:35,275 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.2 pTM=0.421 ipTM=0.274 tol=11.8
2024-12-09 17:53:16,682 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.2 pTM=0.413 ipTM=0.247 tol=12.7
2024-12-09 17:57:58,086 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.3 pTM=0.425 ipTM=0.294 tol=11.3
2024-12-09 18:02:39,470 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.4 pTM=0.413 ipTM=0.251 tol=12.1
2024-12-09 18:07:20,872 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.4 pTM=0.414 ipTM=0.251 tol=13.9
2024-12-09 18:12:02,099 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.8 pTM=0.426 ipTM=0.28 tol=10.6
2024-12-09 18:16:43,289 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.4 pTM=0.41 ipTM=0.247 tol=9.63
2024-12-09 18:21:24,528 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.4 pTM=0.419 ipTM=0.261 tol=7.68
2024-12-09 18:26:05,816 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.3 pTM=0.414 ipTM=0.248 tol=7.88
2024-12-09 18:30:47,093 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.2 pTM=0.422 ipTM=0.275 tol=6.95
2024-12-09 18:35:28,395 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.4 pTM=0.413 ipTM=0.251 tol=13.8
2024-12-09 18:40:09,780 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.1 pTM=0.417 ipTM=0.259 tol=13.1
2024-12-09 18:44:51,194 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.1 pTM=0.408 ipTM=0.246 tol=9.52
2024-12-09 18:49:32,524 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.2 pTM=0.415 ipTM=0.252 tol=7.39
2024-12-09 18:54:13,793 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.2 pTM=0.421 ipTM=0.275 tol=6.73
2024-12-09 18:58:55,115 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.3 pTM=0.409 ipTM=0.248 tol=13.6
2024-12-09 19:03:36,630 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.1 pTM=0.411 ipTM=0.247 tol=13.6
2024-12-09 19:08:18,019 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.3 pTM=0.419 ipTM=0.263 tol=11.5
2024-12-09 19:12:59,449 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.3 pTM=0.414 ipTM=0.247 tol=10.5
2024-12-09 19:17:40,793 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.5 pTM=0.416 ipTM=0.257 tol=10.5
2024-12-09 19:22:22,155 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.4 pTM=0.417 ipTM=0.257 tol=9.52
2024-12-09 19:27:03,560 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.3 pTM=0.414 ipTM=0.25 tol=7.94
2024-12-09 19:31:44,939 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.4 pTM=0.419 ipTM=0.266 tol=7.98
2024-12-09 19:36:26,290 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.2 pTM=0.411 ipTM=0.248 tol=13.4
2024-12-09 19:41:07,678 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.2 pTM=0.417 ipTM=0.259 tol=12.9
2024-12-09 19:41:07,681 alphafold2_multimer_v3_model_5_seed_000 took 8722.2s (30 recycles)
2024-12-09 19:41:11,097 reranking models by 'multimer' metric
2024-12-09 19:41:15,416 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 19:52:47,097 Relaxation took 696.0s
2024-12-09 19:52:47,097 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.4 pTM=0.406 ipTM=0.282
2024-12-09 20:00:55,215 Relaxation took 488.1s
2024-12-09 20:00:55,216 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=47.4 pTM=0.402 ipTM=0.273
2024-12-09 20:09:13,279 Relaxation took 498.1s
2024-12-09 20:09:13,279 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.5 pTM=0.409 ipTM=0.266
2024-12-09 20:16:56,435 Relaxation took 463.2s
2024-12-09 20:16:56,435 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.2 pTM=0.417 ipTM=0.259
2024-12-09 20:26:45,057 Relaxation took 588.6s
2024-12-09 20:26:45,057 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.8 pTM=0.407 ipTM=0.251
2024-12-09 20:26:52,499 Done