2024-12-09 07:39:25,979 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 07:39:26,330 Running on GPU
2024-12-09 07:39:30,024 Found 6 citations for tools or databases
2024-12-09 07:39:30,024 Query 1/1: UBAC1_ELAC2 (length 1231)
2024-12-09 07:39:30,310 Sleeping for 8s. Reason: PENDING
2024-12-09 07:39:38,569 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:39:43,825 Sleeping for 5s. Reason: RUNNING
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2024-12-09 07:40:01,592 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:40:06,845 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:40:14,106 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:40:22,364 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:40:28,618 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:40:35,876 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:40:43,132 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:40:48,392 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:40:56,647 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:41:05,901 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:41:16,176 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:41:21,427 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:41:29,683 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:41:38,944 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:41:44,198 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:41:55,125 Sleeping for 8s. Reason: PENDING
2024-12-09 07:42:03,392 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:42:10,650 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:42:16,909 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:42:23,166 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:42:32,427 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:42:41,690 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:42:47,945 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:42:57,205 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:43:06,471 Sleeping for 8s. Reason: RUNNING
2024-12-09 07:43:14,730 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:43:20,987 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:43:31,556 Setting max_seq=508, max_extra_seq=2048
2024-12-09 07:46:49,885 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.5 pTM=0.66 ipTM=0.392
2024-12-09 07:47:27,893 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.6 pTM=0.647 ipTM=0.25 tol=5.38
2024-12-09 07:48:06,141 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.3 pTM=0.652 ipTM=0.269 tol=2.42
2024-12-09 07:48:44,568 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.8 pTM=0.646 ipTM=0.252 tol=1.37
2024-12-09 07:49:23,111 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.6 pTM=0.647 ipTM=0.255 tol=1.58
2024-12-09 07:50:01,661 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.8 pTM=0.643 ipTM=0.246 tol=1.71
2024-12-09 07:50:40,210 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.5 pTM=0.645 ipTM=0.251 tol=1.94
2024-12-09 07:51:18,796 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.8 pTM=0.643 ipTM=0.246 tol=2.57
2024-12-09 07:51:57,376 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.9 pTM=0.645 ipTM=0.246 tol=1.69
2024-12-09 07:52:35,947 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.8 pTM=0.643 ipTM=0.248 tol=1.05
2024-12-09 07:53:14,522 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.6 pTM=0.643 ipTM=0.247 tol=1.15
2024-12-09 07:53:53,110 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.7 pTM=0.642 ipTM=0.246 tol=1.13
2024-12-09 07:54:31,676 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.6 pTM=0.641 ipTM=0.24 tol=1.11
2024-12-09 07:55:10,261 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.5 pTM=0.641 ipTM=0.245 tol=1.02
2024-12-09 07:55:48,841 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.6 pTM=0.642 ipTM=0.239 tol=0.935
2024-12-09 07:56:27,440 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.7 pTM=0.644 ipTM=0.265 tol=1.31
2024-12-09 07:57:06,032 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.6 pTM=0.641 ipTM=0.239 tol=1.38
2024-12-09 07:57:44,613 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.7 pTM=0.641 ipTM=0.244 tol=1.3
2024-12-09 07:58:23,218 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.5 pTM=0.64 ipTM=0.237 tol=1.11
2024-12-09 07:59:01,834 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.8 pTM=0.641 ipTM=0.241 tol=1.39
2024-12-09 07:59:40,455 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.6 pTM=0.641 ipTM=0.238 tol=1.25
2024-12-09 08:00:19,064 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.6 pTM=0.64 ipTM=0.245 tol=1.53
2024-12-09 08:00:57,639 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.4 pTM=0.64 ipTM=0.239 tol=1.39
2024-12-09 08:01:36,230 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.4 pTM=0.639 ipTM=0.243 tol=1.47
2024-12-09 08:02:14,819 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.6 pTM=0.64 ipTM=0.24 tol=1.39
2024-12-09 08:02:53,386 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.8 pTM=0.642 ipTM=0.25 tol=1.31
2024-12-09 08:03:31,978 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.5 pTM=0.641 ipTM=0.237 tol=1.46
2024-12-09 08:04:10,553 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.8 pTM=0.646 ipTM=0.273 tol=1.37
2024-12-09 08:04:49,114 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.6 pTM=0.641 ipTM=0.246 tol=1.29
2024-12-09 08:05:27,698 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.8 pTM=0.641 ipTM=0.245 tol=1.32
2024-12-09 08:06:06,287 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.6 pTM=0.641 ipTM=0.238 tol=0.847
2024-12-09 08:06:06,288 alphafold2_multimer_v3_model_1_seed_000 took 1349.6s (30 recycles)
2024-12-09 08:06:45,722 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.8 pTM=0.65 ipTM=0.355
2024-12-09 08:07:24,352 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.6 pTM=0.653 ipTM=0.29 tol=4.31
2024-12-09 08:08:02,967 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.2 pTM=0.642 ipTM=0.247 tol=2.38
2024-12-09 08:08:41,592 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.6 pTM=0.643 ipTM=0.25 tol=1.25
2024-12-09 08:09:20,269 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.5 pTM=0.644 ipTM=0.259 tol=1.22
2024-12-09 08:09:58,888 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.6 pTM=0.642 ipTM=0.248 tol=1.07
2024-12-09 08:10:37,523 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.6 pTM=0.645 ipTM=0.263 tol=0.725
2024-12-09 08:11:16,166 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.5 pTM=0.643 ipTM=0.252 tol=0.999
2024-12-09 08:11:54,811 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.6 pTM=0.642 ipTM=0.246 tol=0.887
2024-12-09 08:12:33,480 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.4 pTM=0.643 ipTM=0.253 tol=0.798
2024-12-09 08:13:12,136 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.4 pTM=0.644 ipTM=0.268 tol=1.71
2024-12-09 08:13:50,772 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.4 pTM=0.641 ipTM=0.247 tol=1.33
2024-12-09 08:14:29,369 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.5 pTM=0.641 ipTM=0.247 tol=1.53
2024-12-09 08:15:07,979 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.4 pTM=0.642 ipTM=0.252 tol=1.53
2024-12-09 08:15:46,605 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.3 pTM=0.64 ipTM=0.245 tol=1.12
2024-12-09 08:16:25,238 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.5 pTM=0.641 ipTM=0.25 tol=1.36
2024-12-09 08:17:03,877 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.8 pTM=0.64 ipTM=0.246 tol=1.45
2024-12-09 08:17:42,510 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.8 pTM=0.64 ipTM=0.246 tol=1.09
2024-12-09 08:18:21,175 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.5 pTM=0.639 ipTM=0.244 tol=1.39
2024-12-09 08:18:59,813 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.4 pTM=0.64 ipTM=0.244 tol=1.19
2024-12-09 08:19:38,428 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.7 pTM=0.639 ipTM=0.241 tol=1.18
2024-12-09 08:20:17,010 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.8 pTM=0.64 ipTM=0.257 tol=1.41
2024-12-09 08:20:55,573 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.7 pTM=0.64 ipTM=0.256 tol=1.25
2024-12-09 08:21:34,114 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.8 pTM=0.639 ipTM=0.241 tol=1.14
2024-12-09 08:22:12,678 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.8 pTM=0.639 ipTM=0.243 tol=1.48
2024-12-09 08:22:51,307 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.8 pTM=0.642 ipTM=0.26 tol=1.34
2024-12-09 08:23:29,962 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.3 pTM=0.641 ipTM=0.253 tol=1.38
2024-12-09 08:24:08,595 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.6 pTM=0.641 ipTM=0.249 tol=1.29
2024-12-09 08:24:47,190 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.6 pTM=0.642 ipTM=0.259 tol=0.718
2024-12-09 08:25:25,811 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.6 pTM=0.642 ipTM=0.259 tol=0.892
2024-12-09 08:26:04,413 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.6 pTM=0.642 ipTM=0.254 tol=0.681
2024-12-09 08:26:04,414 alphafold2_multimer_v3_model_2_seed_000 took 1197.2s (30 recycles)
2024-12-09 08:26:43,909 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=69.5 pTM=0.645 ipTM=0.323
2024-12-09 08:27:22,634 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.8 pTM=0.652 ipTM=0.272 tol=3.47
2024-12-09 08:28:01,322 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.1 pTM=0.642 ipTM=0.251 tol=1.64
2024-12-09 08:28:39,995 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.1 pTM=0.647 ipTM=0.269 tol=1.93
2024-12-09 08:29:18,666 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.4 pTM=0.651 ipTM=0.302 tol=1.34
2024-12-09 08:29:57,351 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71 pTM=0.642 ipTM=0.246 tol=0.852
2024-12-09 08:30:36,066 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.9 pTM=0.645 ipTM=0.256 tol=0.722
2024-12-09 08:31:14,730 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.3 pTM=0.648 ipTM=0.278 tol=0.807
2024-12-09 08:31:53,420 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.9 pTM=0.643 ipTM=0.25 tol=1.05
2024-12-09 08:32:32,089 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71 pTM=0.65 ipTM=0.285 tol=0.957
2024-12-09 08:33:10,776 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.9 pTM=0.643 ipTM=0.249 tol=0.841
2024-12-09 08:33:49,464 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.1 pTM=0.649 ipTM=0.289 tol=0.767
2024-12-09 08:34:28,143 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.8 pTM=0.642 ipTM=0.246 tol=1.16
2024-12-09 08:35:06,810 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.9 pTM=0.643 ipTM=0.249 tol=0.999
2024-12-09 08:35:45,506 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.9 pTM=0.639 ipTM=0.237 tol=1.39
2024-12-09 08:36:24,128 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.2 pTM=0.651 ipTM=0.271 tol=1.64
2024-12-09 08:37:02,761 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.1 pTM=0.639 ipTM=0.242 tol=3.01
2024-12-09 08:37:41,335 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.2 pTM=0.645 ipTM=0.258 tol=2.65
2024-12-09 08:38:19,908 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.4 pTM=0.646 ipTM=0.271 tol=1.15
2024-12-09 08:38:58,509 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.1 pTM=0.639 ipTM=0.24 tol=1.99
2024-12-09 08:39:37,119 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71 pTM=0.645 ipTM=0.258 tol=1.62
2024-12-09 08:40:15,725 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.9 pTM=0.635 ipTM=0.231 tol=1.66
2024-12-09 08:40:54,320 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.1 pTM=0.646 ipTM=0.264 tol=2
2024-12-09 08:41:32,973 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71 pTM=0.635 ipTM=0.228 tol=2.53
2024-12-09 08:42:11,650 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71 pTM=0.642 ipTM=0.245 tol=2.01
2024-12-09 08:42:50,344 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.7 pTM=0.634 ipTM=0.224 tol=1.46
2024-12-09 08:43:28,979 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.9 pTM=0.642 ipTM=0.248 tol=1.91
2024-12-09 08:44:07,585 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.9 pTM=0.635 ipTM=0.229 tol=0.959
2024-12-09 08:44:46,216 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71 pTM=0.646 ipTM=0.262 tol=1.37
2024-12-09 08:45:24,881 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.9 pTM=0.635 ipTM=0.229 tol=1.04
2024-12-09 08:46:03,533 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71 pTM=0.643 ipTM=0.25 tol=1.1
2024-12-09 08:46:03,534 alphafold2_multimer_v3_model_3_seed_000 took 1198.2s (30 recycles)
2024-12-09 08:46:43,006 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.3 pTM=0.664 ipTM=0.479
2024-12-09 08:47:21,643 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.9 pTM=0.641 ipTM=0.255 tol=6.02
2024-12-09 08:48:00,246 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.5 pTM=0.641 ipTM=0.246 tol=4.76
2024-12-09 08:48:38,836 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=70.8 pTM=0.644 ipTM=0.255 tol=3.77
2024-12-09 08:49:17,437 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.4 pTM=0.64 ipTM=0.234 tol=3.16
2024-12-09 08:49:56,066 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.6 pTM=0.64 ipTM=0.24 tol=3.25
2024-12-09 08:50:34,719 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.4 pTM=0.639 ipTM=0.232 tol=1.89
2024-12-09 08:51:13,361 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.4 pTM=0.638 ipTM=0.234 tol=1.56
2024-12-09 08:51:51,996 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.6 pTM=0.64 ipTM=0.233 tol=2.05
2024-12-09 08:52:30,626 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.4 pTM=0.638 ipTM=0.234 tol=2.19
2024-12-09 08:53:09,254 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.7 pTM=0.639 ipTM=0.231 tol=2.75
2024-12-09 08:53:47,895 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.6 pTM=0.638 ipTM=0.229 tol=2.24
2024-12-09 08:54:26,553 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.8 pTM=0.639 ipTM=0.23 tol=1.68
2024-12-09 08:55:05,161 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.5 pTM=0.637 ipTM=0.225 tol=1.56
2024-12-09 08:55:43,777 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.5 pTM=0.638 ipTM=0.226 tol=1.6
2024-12-09 08:56:22,401 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.3 pTM=0.637 ipTM=0.23 tol=1.56
2024-12-09 08:57:00,999 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.4 pTM=0.635 ipTM=0.222 tol=1.63
2024-12-09 08:57:39,589 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.4 pTM=0.635 ipTM=0.224 tol=1.3
2024-12-09 08:58:18,199 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.2 pTM=0.636 ipTM=0.222 tol=3.13
2024-12-09 08:58:56,781 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.3 pTM=0.635 ipTM=0.224 tol=2.33
2024-12-09 08:59:35,368 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.4 pTM=0.635 ipTM=0.223 tol=2.63
2024-12-09 09:00:13,937 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.3 pTM=0.634 ipTM=0.225 tol=1.8
2024-12-09 09:00:52,522 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.4 pTM=0.635 ipTM=0.224 tol=2.08
2024-12-09 09:01:31,150 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.635 ipTM=0.222 tol=1.91
2024-12-09 09:02:09,777 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.6 pTM=0.636 ipTM=0.22 tol=1.88
2024-12-09 09:02:48,412 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.3 pTM=0.635 ipTM=0.221 tol=1.48
2024-12-09 09:03:27,036 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.636 ipTM=0.22 tol=1.55
2024-12-09 09:04:05,669 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.2 pTM=0.636 ipTM=0.228 tol=2.73
2024-12-09 09:04:44,329 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.5 pTM=0.636 ipTM=0.223 tol=2.28
2024-12-09 09:05:22,953 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.1 pTM=0.635 ipTM=0.229 tol=3.02
2024-12-09 09:06:01,601 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.4 pTM=0.637 ipTM=0.228 tol=1.87
2024-12-09 09:06:01,603 alphafold2_multimer_v3_model_4_seed_000 took 1197.2s (30 recycles)
2024-12-09 09:06:41,021 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.6 pTM=0.646 ipTM=0.438
2024-12-09 09:07:19,680 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.9 pTM=0.644 ipTM=0.254 tol=5.76
2024-12-09 09:07:58,302 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.2 pTM=0.64 ipTM=0.246 tol=2.1
2024-12-09 09:08:36,923 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70.1 pTM=0.638 ipTM=0.243 tol=1.87
2024-12-09 09:09:15,560 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.2 pTM=0.637 ipTM=0.228 tol=2.04
2024-12-09 09:09:54,214 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.2 pTM=0.636 ipTM=0.232 tol=2.45
2024-12-09 09:10:32,826 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.1 pTM=0.636 ipTM=0.233 tol=2.83
2024-12-09 09:11:11,468 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.1 pTM=0.635 ipTM=0.235 tol=2.34
2024-12-09 09:11:50,109 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.3 pTM=0.636 ipTM=0.231 tol=1.7
2024-12-09 09:12:28,747 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.1 pTM=0.636 ipTM=0.235 tol=1.99
2024-12-09 09:13:07,371 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.1 pTM=0.635 ipTM=0.229 tol=1.74
2024-12-09 09:13:46,030 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.2 pTM=0.634 ipTM=0.23 tol=1.61
2024-12-09 09:14:24,690 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.2 pTM=0.635 ipTM=0.228 tol=1.34
2024-12-09 09:15:03,340 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.1 pTM=0.633 ipTM=0.224 tol=0.896
2024-12-09 09:15:42,016 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.1 pTM=0.634 ipTM=0.229 tol=0.816
2024-12-09 09:16:20,657 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70 pTM=0.633 ipTM=0.23 tol=1.13
2024-12-09 09:16:59,294 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.2 pTM=0.634 ipTM=0.227 tol=1.22
2024-12-09 09:17:37,926 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.2 pTM=0.633 ipTM=0.225 tol=1.38
2024-12-09 09:18:16,541 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.1 pTM=0.633 ipTM=0.226 tol=1.46
2024-12-09 09:18:55,163 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.1 pTM=0.633 ipTM=0.226 tol=1.77
2024-12-09 09:19:33,784 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.1 pTM=0.632 ipTM=0.224 tol=1.53
2024-12-09 09:20:12,424 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.1 pTM=0.633 ipTM=0.229 tol=1.39
2024-12-09 09:20:51,023 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.9 pTM=0.632 ipTM=0.227 tol=1.52
2024-12-09 09:21:29,626 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70 pTM=0.634 ipTM=0.229 tol=1.61
2024-12-09 09:22:08,200 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.2 pTM=0.634 ipTM=0.228 tol=1.2
2024-12-09 09:22:46,799 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.9 pTM=0.633 ipTM=0.227 tol=1.29
2024-12-09 09:23:25,353 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.9 pTM=0.633 ipTM=0.226 tol=1.24
2024-12-09 09:24:03,926 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.9 pTM=0.632 ipTM=0.226 tol=1.39
2024-12-09 09:24:42,519 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.1 pTM=0.633 ipTM=0.228 tol=1.36
2024-12-09 09:25:21,130 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.1 pTM=0.633 ipTM=0.228 tol=1.42
2024-12-09 09:25:59,731 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.1 pTM=0.633 ipTM=0.229 tol=1.48
2024-12-09 09:25:59,732 alphafold2_multimer_v3_model_5_seed_000 took 1197.2s (30 recycles)
2024-12-09 09:26:00,643 reranking models by 'multimer' metric
2024-12-09 09:26:01,767 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 09:28:33,115 Relaxation took 152.5s
2024-12-09 09:28:33,115 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.6 pTM=0.642 ipTM=0.254
2024-12-09 09:30:21,110 Relaxation took 108.0s
2024-12-09 09:30:21,110 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71 pTM=0.643 ipTM=0.25
2024-12-09 09:32:47,711 Relaxation took 146.6s
2024-12-09 09:32:47,711 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.6 pTM=0.641 ipTM=0.238
2024-12-09 09:35:03,726 Relaxation took 136.0s
2024-12-09 09:35:03,726 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.4 pTM=0.637 ipTM=0.228
2024-12-09 09:37:08,510 Relaxation took 124.8s
2024-12-09 09:37:08,510 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.1 pTM=0.633 ipTM=0.229
2024-12-09 09:37:10,960 Done