2024-12-09 07:54:17,882 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 07:54:18,253 Running on GPU
2024-12-09 07:54:22,289 Found 6 citations for tools or databases
2024-12-09 07:54:22,289 Query 1/1: UBAC1_NMS (length 558)
2024-12-09 07:54:22,563 Sleeping for 7s. Reason: PENDING
2024-12-09 07:54:29,819 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:54:39,074 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:54:49,333 Sleeping for 6s. Reason: RUNNING
2024-12-09 07:54:55,591 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:55:04,849 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:55:12,105 Sleeping for 5s. Reason: RUNNING
2024-12-09 07:55:17,359 Sleeping for 7s. Reason: RUNNING
2024-12-09 07:55:25,729 Sleeping for 7s. Reason: PENDING
2024-12-09 07:55:32,985 Sleeping for 9s. Reason: RUNNING
2024-12-09 07:55:42,249 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:55:52,511 Sleeping for 10s. Reason: RUNNING
2024-12-09 07:56:04,086 Setting max_seq=508, max_extra_seq=2048
2024-12-09 07:59:18,568 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.9 pTM=0.367 ipTM=0.131
2024-12-09 07:59:27,495 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.5 pTM=0.355 ipTM=0.146 tol=6.42
2024-12-09 07:59:36,421 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50 pTM=0.354 ipTM=0.164 tol=4.45
2024-12-09 07:59:45,340 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.1 pTM=0.363 ipTM=0.17 tol=2.43
2024-12-09 07:59:54,266 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.5 pTM=0.364 ipTM=0.174 tol=2.01
2024-12-09 08:00:03,184 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.2 pTM=0.36 ipTM=0.19 tol=2.03
2024-12-09 08:00:12,106 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.2 pTM=0.369 ipTM=0.202 tol=1.46
2024-12-09 08:00:21,027 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.7 pTM=0.364 ipTM=0.202 tol=1.72
2024-12-09 08:00:29,954 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.5 pTM=0.374 ipTM=0.207 tol=1.18
2024-12-09 08:00:38,875 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.3 pTM=0.376 ipTM=0.208 tol=1.56
2024-12-09 08:00:47,799 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.9 pTM=0.37 ipTM=0.207 tol=1.21
2024-12-09 08:00:56,732 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.3 pTM=0.379 ipTM=0.218 tol=1.09
2024-12-09 08:01:05,664 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.377 ipTM=0.216 tol=1.42
2024-12-09 08:01:14,585 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.4 pTM=0.373 ipTM=0.221 tol=1.42
2024-12-09 08:01:23,518 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53 pTM=0.375 ipTM=0.208 tol=1.26
2024-12-09 08:01:32,445 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.6 pTM=0.381 ipTM=0.227 tol=1.07
2024-12-09 08:01:41,371 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54 pTM=0.389 ipTM=0.232 tol=1.37
2024-12-09 08:01:50,297 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.2 pTM=0.387 ipTM=0.239 tol=1.47
2024-12-09 08:01:59,235 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.9 pTM=0.388 ipTM=0.239 tol=1.65
2024-12-09 08:02:08,159 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.3 pTM=0.394 ipTM=0.248 tol=0.863
2024-12-09 08:02:17,078 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.3 pTM=0.393 ipTM=0.244 tol=0.988
2024-12-09 08:02:26,010 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.6 pTM=0.394 ipTM=0.244 tol=0.696
2024-12-09 08:02:34,943 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.8 pTM=0.388 ipTM=0.242 tol=0.95
2024-12-09 08:02:43,877 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.7 pTM=0.402 ipTM=0.254 tol=1.12
2024-12-09 08:02:52,815 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.2 pTM=0.398 ipTM=0.25 tol=0.79
2024-12-09 08:03:01,763 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.1 pTM=0.398 ipTM=0.253 tol=0.828
2024-12-09 08:03:10,711 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.2 pTM=0.399 ipTM=0.252 tol=0.76
2024-12-09 08:03:19,647 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.5 pTM=0.394 ipTM=0.248 tol=0.902
2024-12-09 08:03:28,585 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.4 pTM=0.394 ipTM=0.247 tol=0.77
2024-12-09 08:03:37,533 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54 pTM=0.397 ipTM=0.25 tol=0.617
2024-12-09 08:03:46,472 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.8 pTM=0.397 ipTM=0.25 tol=0.875
2024-12-09 08:03:46,472 alphafold2_multimer_v3_model_1_seed_000 took 457.0s (30 recycles)
2024-12-09 08:03:55,686 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.4 pTM=0.384 ipTM=0.161
2024-12-09 08:04:04,649 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.2 pTM=0.401 ipTM=0.195 tol=6.94
2024-12-09 08:04:13,611 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.2 pTM=0.413 ipTM=0.232 tol=4.91
2024-12-09 08:04:22,577 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.7 pTM=0.415 ipTM=0.237 tol=1.98
2024-12-09 08:04:31,533 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58 pTM=0.414 ipTM=0.227 tol=1.78
2024-12-09 08:04:40,501 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.3 pTM=0.416 ipTM=0.235 tol=2.78
2024-12-09 08:04:49,468 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.3 pTM=0.417 ipTM=0.231 tol=2.4
2024-12-09 08:04:58,424 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.2 pTM=0.421 ipTM=0.243 tol=2.74
2024-12-09 08:05:07,385 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.2 pTM=0.42 ipTM=0.238 tol=1.26
2024-12-09 08:05:16,346 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.7 pTM=0.425 ipTM=0.242 tol=1.86
2024-12-09 08:05:25,304 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.3 pTM=0.416 ipTM=0.232 tol=1.75
2024-12-09 08:05:34,261 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.2 pTM=0.418 ipTM=0.233 tol=2.38
2024-12-09 08:05:43,220 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.3 pTM=0.427 ipTM=0.244 tol=2.08
2024-12-09 08:05:52,190 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.8 pTM=0.415 ipTM=0.235 tol=1.75
2024-12-09 08:06:01,162 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58 pTM=0.419 ipTM=0.237 tol=1.06
2024-12-09 08:06:10,129 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.3 pTM=0.422 ipTM=0.237 tol=1.05
2024-12-09 08:06:19,085 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.9 pTM=0.429 ipTM=0.249 tol=1.77
2024-12-09 08:06:28,043 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.4 pTM=0.421 ipTM=0.24 tol=1.56
2024-12-09 08:06:36,998 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.1 pTM=0.422 ipTM=0.242 tol=0.92
2024-12-09 08:06:45,958 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.9 pTM=0.419 ipTM=0.234 tol=1.43
2024-12-09 08:06:54,923 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.3 pTM=0.424 ipTM=0.24 tol=1.45
2024-12-09 08:07:03,897 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.3 pTM=0.421 ipTM=0.238 tol=2.32
2024-12-09 08:07:12,856 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.9 pTM=0.418 ipTM=0.23 tol=1.22
2024-12-09 08:07:21,819 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.8 pTM=0.425 ipTM=0.244 tol=1.32
2024-12-09 08:07:30,776 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.6 pTM=0.426 ipTM=0.248 tol=1.2
2024-12-09 08:07:39,729 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.2 pTM=0.42 ipTM=0.239 tol=0.933
2024-12-09 08:07:48,686 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.7 pTM=0.426 ipTM=0.246 tol=2.17
2024-12-09 08:07:57,641 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.9 pTM=0.417 ipTM=0.235 tol=1.35
2024-12-09 08:08:06,613 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.4 pTM=0.417 ipTM=0.236 tol=0.942
2024-12-09 08:08:15,571 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.4 pTM=0.423 ipTM=0.244 tol=1.01
2024-12-09 08:08:24,531 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.9 pTM=0.421 ipTM=0.244 tol=1.39
2024-12-09 08:08:24,531 alphafold2_multimer_v3_model_2_seed_000 took 277.8s (30 recycles)
2024-12-09 08:08:33,795 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.1 pTM=0.353 ipTM=0.126
2024-12-09 08:08:42,781 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.1 pTM=0.373 ipTM=0.162 tol=13.1
2024-12-09 08:08:51,753 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.6 pTM=0.401 ipTM=0.216 tol=10.2
2024-12-09 08:09:00,715 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.7 pTM=0.408 ipTM=0.227 tol=4.59
2024-12-09 08:09:09,678 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.9 pTM=0.413 ipTM=0.242 tol=2.86
2024-12-09 08:09:18,633 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.5 pTM=0.415 ipTM=0.239 tol=2.08
2024-12-09 08:09:27,596 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.2 pTM=0.421 ipTM=0.25 tol=1.11
2024-12-09 08:09:36,558 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57 pTM=0.423 ipTM=0.25 tol=1.49
2024-12-09 08:09:45,515 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.5 pTM=0.426 ipTM=0.25 tol=1.41
2024-12-09 08:09:54,489 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.5 pTM=0.428 ipTM=0.247 tol=1.42
2024-12-09 08:10:03,446 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.9 pTM=0.424 ipTM=0.255 tol=2.18
2024-12-09 08:10:12,403 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.2 pTM=0.428 ipTM=0.251 tol=1.92
2024-12-09 08:10:21,359 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57 pTM=0.424 ipTM=0.248 tol=1.82
2024-12-09 08:10:30,323 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.8 pTM=0.412 ipTM=0.224 tol=2.03
2024-12-09 08:10:39,303 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57 pTM=0.418 ipTM=0.238 tol=2.52
2024-12-09 08:10:48,261 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.1 pTM=0.424 ipTM=0.238 tol=2.11
2024-12-09 08:10:57,218 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.4 pTM=0.425 ipTM=0.25 tol=1.24
2024-12-09 08:11:06,170 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.6 pTM=0.42 ipTM=0.241 tol=1.74
2024-12-09 08:11:15,124 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.6 pTM=0.418 ipTM=0.245 tol=1.38
2024-12-09 08:11:24,078 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.4 pTM=0.421 ipTM=0.24 tol=1.89
2024-12-09 08:11:33,035 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.9 pTM=0.422 ipTM=0.246 tol=1.97
2024-12-09 08:11:41,991 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.7 pTM=0.421 ipTM=0.24 tol=0.927
2024-12-09 08:11:50,948 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.9 pTM=0.421 ipTM=0.251 tol=1.86
2024-12-09 08:11:59,912 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.43 ipTM=0.253 tol=1.21
2024-12-09 08:12:08,874 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.5 pTM=0.427 ipTM=0.255 tol=0.867
2024-12-09 08:12:17,829 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.9 pTM=0.421 ipTM=0.231 tol=1.82
2024-12-09 08:12:26,806 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.5 pTM=0.424 ipTM=0.251 tol=1.87
2024-12-09 08:12:35,766 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.4 pTM=0.418 ipTM=0.243 tol=1.53
2024-12-09 08:12:44,723 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.6 pTM=0.42 ipTM=0.248 tol=1.56
2024-12-09 08:12:53,683 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.4 pTM=0.428 ipTM=0.252 tol=2.13
2024-12-09 08:13:02,643 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.2 pTM=0.425 ipTM=0.253 tol=1.71
2024-12-09 08:13:02,644 alphafold2_multimer_v3_model_3_seed_000 took 277.8s (30 recycles)
2024-12-09 08:13:11,881 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.6 pTM=0.365 ipTM=0.14
2024-12-09 08:13:20,881 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.5 pTM=0.39 ipTM=0.179 tol=8.33
2024-12-09 08:13:29,858 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.5 pTM=0.43 ipTM=0.324 tol=10.9
2024-12-09 08:13:38,832 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.3 pTM=0.426 ipTM=0.291 tol=5.03
2024-12-09 08:13:47,798 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.2 pTM=0.437 ipTM=0.274 tol=4.53
2024-12-09 08:13:56,766 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58 pTM=0.44 ipTM=0.291 tol=2.71
2024-12-09 08:14:05,736 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.8 pTM=0.432 ipTM=0.247 tol=2.52
2024-12-09 08:14:14,710 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.1 pTM=0.435 ipTM=0.255 tol=2.18
2024-12-09 08:14:23,679 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.3 pTM=0.441 ipTM=0.265 tol=2.04
2024-12-09 08:14:32,648 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.8 pTM=0.442 ipTM=0.263 tol=1.51
2024-12-09 08:14:41,614 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.3 pTM=0.433 ipTM=0.249 tol=2.9
2024-12-09 08:14:50,581 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.2 pTM=0.44 ipTM=0.273 tol=2.21
2024-12-09 08:14:59,541 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59 pTM=0.446 ipTM=0.281 tol=2
2024-12-09 08:15:08,506 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.1 pTM=0.441 ipTM=0.278 tol=1.81
2024-12-09 08:15:17,469 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.4 pTM=0.427 ipTM=0.237 tol=1.67
2024-12-09 08:15:26,443 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.3 pTM=0.444 ipTM=0.271 tol=3.88
2024-12-09 08:15:35,414 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.6 pTM=0.448 ipTM=0.321 tol=2.64
2024-12-09 08:15:44,383 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.8 pTM=0.445 ipTM=0.28 tol=2.49
2024-12-09 08:15:53,344 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58 pTM=0.439 ipTM=0.277 tol=2.14
2024-12-09 08:16:02,317 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.2 pTM=0.445 ipTM=0.279 tol=1.78
2024-12-09 08:16:11,281 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.1 pTM=0.439 ipTM=0.27 tol=1.57
2024-12-09 08:16:20,247 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.2 pTM=0.438 ipTM=0.269 tol=2.52
2024-12-09 08:16:29,226 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.9 pTM=0.433 ipTM=0.261 tol=1.8
2024-12-09 08:16:38,199 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.6 pTM=0.446 ipTM=0.267 tol=1.5
2024-12-09 08:16:47,163 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.6 pTM=0.443 ipTM=0.268 tol=1.74
2024-12-09 08:16:56,128 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.8 pTM=0.44 ipTM=0.267 tol=2.32
2024-12-09 08:17:05,102 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59.1 pTM=0.444 ipTM=0.27 tol=4.34
2024-12-09 08:17:14,088 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.2 pTM=0.443 ipTM=0.269 tol=2.77
2024-12-09 08:17:23,068 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.7 pTM=0.435 ipTM=0.266 tol=2.91
2024-12-09 08:17:32,034 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.4 pTM=0.444 ipTM=0.277 tol=1.94
2024-12-09 08:17:40,995 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.6 pTM=0.437 ipTM=0.262 tol=1.51
2024-12-09 08:17:40,995 alphafold2_multimer_v3_model_4_seed_000 took 278.1s (30 recycles)
2024-12-09 08:17:50,238 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.9 pTM=0.384 ipTM=0.125
2024-12-09 08:17:59,219 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.8 pTM=0.381 ipTM=0.124 tol=5.82
2024-12-09 08:18:08,192 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.6 pTM=0.392 ipTM=0.139 tol=6.29
2024-12-09 08:18:17,147 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.7 pTM=0.398 ipTM=0.137 tol=2.51
2024-12-09 08:18:26,105 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.2 pTM=0.4 ipTM=0.134 tol=1.92
2024-12-09 08:18:35,058 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.7 pTM=0.404 ipTM=0.137 tol=2.14
2024-12-09 08:18:44,017 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.1 pTM=0.404 ipTM=0.139 tol=1.32
2024-12-09 08:18:52,978 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.4 pTM=0.409 ipTM=0.132 tol=2.09
2024-12-09 08:19:01,939 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.3 pTM=0.41 ipTM=0.137 tol=1.38
2024-12-09 08:19:10,900 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.7 pTM=0.413 ipTM=0.132 tol=1.69
2024-12-09 08:19:19,868 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55 pTM=0.411 ipTM=0.142 tol=1.97
2024-12-09 08:19:28,828 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.5 pTM=0.413 ipTM=0.137 tol=1.67
2024-12-09 08:19:37,789 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.6 pTM=0.418 ipTM=0.143 tol=1.79
2024-12-09 08:19:46,746 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.4 pTM=0.416 ipTM=0.133 tol=1.18
2024-12-09 08:19:55,706 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.8 pTM=0.421 ipTM=0.146 tol=1.31
2024-12-09 08:20:04,665 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56 pTM=0.423 ipTM=0.131 tol=2.51
2024-12-09 08:20:13,636 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.3 pTM=0.427 ipTM=0.142 tol=3.15
2024-12-09 08:20:22,589 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56 pTM=0.424 ipTM=0.131 tol=2.47
2024-12-09 08:20:31,538 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.5 pTM=0.424 ipTM=0.146 tol=2.28
2024-12-09 08:20:40,494 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56 pTM=0.427 ipTM=0.142 tol=2.19
2024-12-09 08:20:49,451 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56 pTM=0.431 ipTM=0.157 tol=2.03
2024-12-09 08:20:58,403 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.7 pTM=0.433 ipTM=0.153 tol=3.29
2024-12-09 08:21:07,356 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.1 pTM=0.428 ipTM=0.156 tol=3.03
2024-12-09 08:21:16,307 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.7 pTM=0.432 ipTM=0.15 tol=1
2024-12-09 08:21:25,259 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57 pTM=0.438 ipTM=0.163 tol=1.36
2024-12-09 08:21:34,216 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.8 pTM=0.433 ipTM=0.152 tol=1.43
2024-12-09 08:21:43,171 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57 pTM=0.435 ipTM=0.158 tol=1.26
2024-12-09 08:21:52,121 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.4 pTM=0.429 ipTM=0.15 tol=1.01
2024-12-09 08:22:01,075 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.3 pTM=0.432 ipTM=0.16 tol=0.904
2024-12-09 08:22:10,028 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.1 pTM=0.434 ipTM=0.152 tol=0.745
2024-12-09 08:22:18,981 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57 pTM=0.438 ipTM=0.164 tol=1.29
2024-12-09 08:22:18,982 alphafold2_multimer_v3_model_5_seed_000 took 277.7s (30 recycles)
2024-12-09 08:22:19,246 reranking models by 'multimer' metric
2024-12-09 08:22:22,921 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 08:22:59,694 Relaxation took 40.4s
2024-12-09 08:22:59,694 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.6 pTM=0.437 ipTM=0.262
2024-12-09 08:23:58,062 Relaxation took 58.4s
2024-12-09 08:23:58,062 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.2 pTM=0.425 ipTM=0.253
2024-12-09 08:24:39,510 Relaxation took 41.4s
2024-12-09 08:24:39,510 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.9 pTM=0.421 ipTM=0.244
2024-12-09 08:25:17,333 Relaxation took 37.8s
2024-12-09 08:25:17,333 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.8 pTM=0.397 ipTM=0.25
2024-12-09 08:25:43,378 Relaxation took 26.0s
2024-12-09 08:25:43,378 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57 pTM=0.438 ipTM=0.164
2024-12-09 08:25:44,622 Done