2024-12-09 08:18:01,931 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 08:18:02,216 Running on GPU
2024-12-09 08:18:06,098 Found 6 citations for tools or databases
2024-12-09 08:18:06,099 Query 1/1: UBE2E3_PECR (length 510)
2024-12-09 08:18:06,384 Sleeping for 5s. Reason: PENDING
2024-12-09 08:18:11,645 Sleeping for 7s. Reason: PENDING
2024-12-09 08:18:18,901 Sleeping for 6s. Reason: PENDING
2024-12-09 08:18:25,160 Sleeping for 8s. Reason: PENDING
2024-12-09 08:18:33,424 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:18:38,675 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:18:43,929 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:18:53,192 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:19:03,479 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:19:09,728 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:19:16,997 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:19:24,255 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:19:29,511 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:19:34,772 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:19:43,034 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:19:53,291 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:20:00,548 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:20:10,809 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:20:20,075 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:20:30,336 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:20:37,592 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:20:46,849 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:20:57,117 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:21:07,399 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:21:13,654 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:21:22,917 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:21:33,177 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:21:41,434 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:21:46,683 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:21:52,943 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:22:03,204 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:22:11,634 Sleeping for 8s. Reason: PENDING
2024-12-09 08:22:19,895 Sleeping for 10s. Reason: PENDING
2024-12-09 08:22:30,168 Sleeping for 10s. Reason: PENDING
2024-12-09 08:22:40,425 Sleeping for 7s. Reason: PENDING
2024-12-09 08:22:47,677 Sleeping for 7s. Reason: PENDING
2024-12-09 08:22:54,936 Sleeping for 7s. Reason: PENDING
2024-12-09 08:23:02,203 Sleeping for 7s. Reason: PENDING
2024-12-09 08:23:09,462 Sleeping for 6s. Reason: PENDING
2024-12-09 08:23:15,718 Sleeping for 10s. Reason: PENDING
2024-12-09 08:23:25,976 Sleeping for 5s. Reason: PENDING
2024-12-09 08:23:31,231 Sleeping for 9s. Reason: PENDING
2024-12-09 08:23:40,631 Sleeping for 8s. Reason: PENDING
2024-12-09 08:23:48,886 Sleeping for 8s. Reason: PENDING
2024-12-09 08:23:57,141 Sleeping for 8s. Reason: PENDING
2024-12-09 08:24:05,406 Sleeping for 6s. Reason: PENDING
2024-12-09 08:24:11,665 Sleeping for 8s. Reason: PENDING
2024-12-09 08:24:19,926 Sleeping for 10s. Reason: PENDING
2024-12-09 08:24:30,189 Sleeping for 6s. Reason: PENDING
2024-12-09 08:24:36,447 Sleeping for 5s. Reason: PENDING
2024-12-09 08:24:41,715 Sleeping for 7s. Reason: PENDING
2024-12-09 08:24:48,971 Sleeping for 5s. Reason: PENDING
2024-12-09 08:24:54,230 Sleeping for 5s. Reason: PENDING
2024-12-09 08:24:59,482 Sleeping for 8s. Reason: PENDING
2024-12-09 08:25:07,745 Sleeping for 9s. Reason: PENDING
2024-12-09 08:25:17,001 Sleeping for 5s. Reason: PENDING
2024-12-09 08:25:22,251 Sleeping for 5s. Reason: PENDING
2024-12-09 08:25:27,523 Sleeping for 5s. Reason: PENDING
2024-12-09 08:25:32,775 Sleeping for 9s. Reason: PENDING
2024-12-09 08:25:42,036 Sleeping for 8s. Reason: PENDING
2024-12-09 08:25:50,304 Sleeping for 7s. Reason: PENDING
2024-12-09 08:25:57,566 Sleeping for 5s. Reason: PENDING
2024-12-09 08:26:02,822 Sleeping for 9s. Reason: PENDING
2024-12-09 08:26:12,090 Sleeping for 10s. Reason: PENDING
2024-12-09 08:26:22,357 Sleeping for 9s. Reason: PENDING
2024-12-09 08:26:31,626 Sleeping for 10s. Reason: PENDING
2024-12-09 08:26:41,898 Sleeping for 8s. Reason: PENDING
2024-12-09 08:26:50,151 Sleeping for 6s. Reason: PENDING
2024-12-09 08:26:56,404 Sleeping for 7s. Reason: PENDING
2024-12-09 08:27:03,664 Sleeping for 9s. Reason: PENDING
2024-12-09 08:27:12,921 Sleeping for 8s. Reason: PENDING
2024-12-09 08:27:21,184 Sleeping for 9s. Reason: PENDING
2024-12-09 08:27:30,442 Sleeping for 6s. Reason: PENDING
2024-12-09 08:27:36,705 Sleeping for 5s. Reason: PENDING
2024-12-09 08:27:41,957 Sleeping for 5s. Reason: PENDING
2024-12-09 08:27:47,211 Sleeping for 7s. Reason: PENDING
2024-12-09 08:27:54,475 Sleeping for 9s. Reason: PENDING
2024-12-09 08:28:03,729 Sleeping for 10s. Reason: PENDING
2024-12-09 08:28:13,991 Sleeping for 5s. Reason: PENDING
2024-12-09 08:28:19,247 Sleeping for 9s. Reason: PENDING
2024-12-09 08:28:28,506 Sleeping for 7s. Reason: PENDING
2024-12-09 08:28:35,765 Sleeping for 6s. Reason: PENDING
2024-12-09 08:28:42,022 Sleeping for 5s. Reason: PENDING
2024-12-09 08:28:47,282 Sleeping for 8s. Reason: PENDING
2024-12-09 08:28:55,538 Sleeping for 6s. Reason: PENDING
2024-12-09 08:29:01,794 Sleeping for 10s. Reason: PENDING
2024-12-09 08:29:12,047 Sleeping for 10s. Reason: PENDING
2024-12-09 08:29:22,313 Sleeping for 8s. Reason: PENDING
2024-12-09 08:29:30,568 Sleeping for 5s. Reason: PENDING
2024-12-09 08:29:35,813 Sleeping for 8s. Reason: PENDING
2024-12-09 08:29:44,068 Sleeping for 5s. Reason: PENDING
2024-12-09 08:29:49,316 Sleeping for 8s. Reason: PENDING
2024-12-09 08:29:57,571 Sleeping for 10s. Reason: PENDING
2024-12-09 08:30:07,832 Sleeping for 9s. Reason: PENDING
2024-12-09 08:30:17,100 Sleeping for 6s. Reason: PENDING
2024-12-09 08:30:23,356 Sleeping for 5s. Reason: PENDING
2024-12-09 08:30:28,614 Sleeping for 10s. Reason: PENDING
2024-12-09 08:30:38,875 Sleeping for 6s. Reason: PENDING
2024-12-09 08:30:45,127 Sleeping for 7s. Reason: PENDING
2024-12-09 08:30:52,386 Sleeping for 9s. Reason: PENDING
2024-12-09 08:31:01,649 Sleeping for 9s. Reason: PENDING
2024-12-09 08:31:10,907 Sleeping for 9s. Reason: PENDING
2024-12-09 08:31:20,170 Sleeping for 9s. Reason: PENDING
2024-12-09 08:31:29,440 Sleeping for 9s. Reason: PENDING
2024-12-09 08:31:38,697 Sleeping for 10s. Reason: PENDING
2024-12-09 08:31:48,957 Sleeping for 6s. Reason: PENDING
2024-12-09 08:31:55,217 Sleeping for 5s. Reason: PENDING
2024-12-09 08:32:00,469 Sleeping for 7s. Reason: PENDING
2024-12-09 08:32:07,723 Sleeping for 7s. Reason: PENDING
2024-12-09 08:32:14,979 Sleeping for 9s. Reason: PENDING
2024-12-09 08:32:24,236 Sleeping for 9s. Reason: PENDING
2024-12-09 08:32:33,502 Sleeping for 9s. Reason: PENDING
2024-12-09 08:32:42,764 Sleeping for 8s. Reason: PENDING
2024-12-09 08:32:51,018 Sleeping for 8s. Reason: PENDING
2024-12-09 08:32:59,289 Sleeping for 5s. Reason: PENDING
2024-12-09 08:33:04,548 Sleeping for 5s. Reason: PENDING
2024-12-09 08:33:09,801 Sleeping for 7s. Reason: PENDING
2024-12-09 08:33:17,054 Sleeping for 6s. Reason: PENDING
2024-12-09 08:33:23,308 Sleeping for 8s. Reason: PENDING
2024-12-09 08:33:31,562 Sleeping for 6s. Reason: PENDING
2024-12-09 08:33:37,818 Sleeping for 8s. Reason: PENDING
2024-12-09 08:33:46,073 Sleeping for 10s. Reason: PENDING
2024-12-09 08:33:56,334 Sleeping for 10s. Reason: PENDING
2024-12-09 08:34:06,589 Sleeping for 6s. Reason: PENDING
2024-12-09 08:34:12,850 Sleeping for 6s. Reason: PENDING
2024-12-09 08:34:19,108 Sleeping for 10s. Reason: PENDING
2024-12-09 08:34:29,372 Sleeping for 7s. Reason: PENDING
2024-12-09 08:34:36,646 Sleeping for 7s. Reason: PENDING
2024-12-09 08:34:43,901 Sleeping for 8s. Reason: PENDING
2024-12-09 08:34:52,156 Sleeping for 6s. Reason: PENDING
2024-12-09 08:34:58,415 Sleeping for 5s. Reason: PENDING
2024-12-09 08:35:03,677 Sleeping for 8s. Reason: PENDING
2024-12-09 08:35:11,931 Sleeping for 7s. Reason: PENDING
2024-12-09 08:35:19,192 Sleeping for 10s. Reason: PENDING
2024-12-09 08:35:29,456 Sleeping for 5s. Reason: PENDING
2024-12-09 08:35:34,710 Sleeping for 7s. Reason: PENDING
2024-12-09 08:35:41,973 Sleeping for 6s. Reason: PENDING
2024-12-09 08:35:48,230 Sleeping for 10s. Reason: PENDING
2024-12-09 08:35:58,491 Sleeping for 5s. Reason: PENDING
2024-12-09 08:36:03,746 Sleeping for 5s. Reason: PENDING
2024-12-09 08:36:08,996 Sleeping for 6s. Reason: PENDING
2024-12-09 08:36:15,256 Sleeping for 9s. Reason: PENDING
2024-12-09 08:36:24,508 Sleeping for 7s. Reason: PENDING
2024-12-09 08:36:31,767 Sleeping for 7s. Reason: PENDING
2024-12-09 08:36:39,023 Sleeping for 8s. Reason: PENDING
2024-12-09 08:36:47,285 Sleeping for 8s. Reason: PENDING
2024-12-09 08:36:55,547 Sleeping for 7s. Reason: PENDING
2024-12-09 08:37:02,806 Sleeping for 9s. Reason: PENDING
2024-12-09 08:37:12,066 Sleeping for 6s. Reason: PENDING
2024-12-09 08:37:18,324 Sleeping for 6s. Reason: PENDING
2024-12-09 08:37:24,576 Sleeping for 9s. Reason: PENDING
2024-12-09 08:37:33,831 Sleeping for 5s. Reason: PENDING
2024-12-09 08:37:39,090 Sleeping for 5s. Reason: PENDING
2024-12-09 08:37:44,355 Sleeping for 10s. Reason: PENDING
2024-12-09 08:37:54,618 Sleeping for 7s. Reason: PENDING
2024-12-09 08:38:01,886 Sleeping for 8s. Reason: PENDING
2024-12-09 08:38:10,155 Sleeping for 7s. Reason: PENDING
2024-12-09 08:38:17,423 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:38:25,684 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:38:34,946 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:38:40,199 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:38:46,455 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:38:51,711 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:38:56,964 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:39:03,219 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:39:09,473 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:39:18,728 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:39:26,133 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:39:34,391 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:39:39,648 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:39:49,924 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:39:58,184 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:40:07,443 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:40:17,698 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:40:24,952 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:40:32,206 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:40:37,467 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:40:42,723 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:40:52,977 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:41:01,237 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:41:10,496 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:41:19,766 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:41:25,024 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:41:32,281 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:41:44,241 Setting max_seq=508, max_extra_seq=2048
2024-12-09 08:44:13,401 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=80.4 pTM=0.575 ipTM=0.182
2024-12-09 08:44:19,081 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79 pTM=0.558 ipTM=0.13 tol=7.21
2024-12-09 08:44:24,749 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.1 pTM=0.548 ipTM=0.117 tol=5.45
2024-12-09 08:44:30,422 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.3 pTM=0.546 ipTM=0.119 tol=4.11
2024-12-09 08:44:36,093 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.9 pTM=0.543 ipTM=0.124 tol=1.93
2024-12-09 08:44:41,780 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.1 pTM=0.597 ipTM=0.134 tol=9.45
2024-12-09 08:44:47,450 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78 pTM=0.554 ipTM=0.129 tol=5.62
2024-12-09 08:44:53,129 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.4 pTM=0.553 ipTM=0.127 tol=1.63
2024-12-09 08:44:58,814 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.1 pTM=0.547 ipTM=0.128 tol=4.19
2024-12-09 08:45:04,490 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78 pTM=0.549 ipTM=0.13 tol=2.02
2024-12-09 08:45:10,176 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=80.9 pTM=0.595 ipTM=0.143 tol=6.4
2024-12-09 08:45:15,846 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.6 pTM=0.561 ipTM=0.139 tol=6.72
2024-12-09 08:45:21,529 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=78.2 pTM=0.55 ipTM=0.125 tol=5.2
2024-12-09 08:45:27,205 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.2 pTM=0.585 ipTM=0.133 tol=5.64
2024-12-09 08:45:32,886 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.2 pTM=0.552 ipTM=0.124 tol=5.45
2024-12-09 08:45:38,574 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.2 pTM=0.55 ipTM=0.134 tol=2.3
2024-12-09 08:45:44,264 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.9 pTM=0.546 ipTM=0.125 tol=3.23
2024-12-09 08:45:49,958 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=80.2 pTM=0.595 ipTM=0.135 tol=6.85
2024-12-09 08:45:55,640 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.1 pTM=0.554 ipTM=0.121 tol=5.63
2024-12-09 08:46:01,335 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.9 pTM=0.549 ipTM=0.123 tol=2.22
2024-12-09 08:46:07,028 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.9 pTM=0.548 ipTM=0.128 tol=2.29
2024-12-09 08:46:12,721 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.9 pTM=0.552 ipTM=0.141 tol=2.22
2024-12-09 08:46:18,400 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=79.7 pTM=0.577 ipTM=0.127 tol=5.57
2024-12-09 08:46:24,092 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.7 pTM=0.555 ipTM=0.133 tol=2.62
2024-12-09 08:46:29,782 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.9 pTM=0.548 ipTM=0.123 tol=5.72
2024-12-09 08:46:35,461 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=79.8 pTM=0.583 ipTM=0.135 tol=5.83
2024-12-09 08:46:41,154 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=79.4 pTM=0.571 ipTM=0.127 tol=1.51
2024-12-09 08:46:46,848 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.1 pTM=0.553 ipTM=0.127 tol=5.59
2024-12-09 08:46:52,542 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.8 pTM=0.557 ipTM=0.132 tol=2.24
2024-12-09 08:46:58,232 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.8 pTM=0.56 ipTM=0.134 tol=1.15
2024-12-09 08:47:03,922 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=79.1 pTM=0.557 ipTM=0.128 tol=3.21
2024-12-09 08:47:03,923 alphafold2_multimer_v3_model_1_seed_000 took 316.2s (30 recycles)
2024-12-09 08:47:09,806 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=78.9 pTM=0.561 ipTM=0.102
2024-12-09 08:47:15,522 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.6 pTM=0.57 ipTM=0.105 tol=7.27
2024-12-09 08:47:21,221 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80 pTM=0.575 ipTM=0.124 tol=5.57
2024-12-09 08:47:26,920 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.1 pTM=0.58 ipTM=0.12 tol=3.7
2024-12-09 08:47:32,622 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.4 pTM=0.581 ipTM=0.126 tol=3.21
2024-12-09 08:47:38,324 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.4 pTM=0.583 ipTM=0.123 tol=2.18
2024-12-09 08:47:44,039 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.6 pTM=0.583 ipTM=0.121 tol=1.19
2024-12-09 08:47:49,741 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.4 pTM=0.579 ipTM=0.119 tol=1.3
2024-12-09 08:47:55,440 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.8 pTM=0.581 ipTM=0.127 tol=1.08
2024-12-09 08:48:01,137 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.4 pTM=0.581 ipTM=0.121 tol=2.61
2024-12-09 08:48:06,845 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.9 pTM=0.583 ipTM=0.123 tol=2.92
2024-12-09 08:48:12,539 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.4 pTM=0.583 ipTM=0.125 tol=2.2
2024-12-09 08:48:18,248 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.9 pTM=0.584 ipTM=0.124 tol=2.03
2024-12-09 08:48:23,943 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.3 pTM=0.583 ipTM=0.123 tol=2.29
2024-12-09 08:48:29,649 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.7 pTM=0.584 ipTM=0.123 tol=2.32
2024-12-09 08:48:35,355 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.9 pTM=0.584 ipTM=0.122 tol=3.64
2024-12-09 08:48:41,057 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.7 pTM=0.582 ipTM=0.118 tol=1.48
2024-12-09 08:48:46,762 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.1 pTM=0.583 ipTM=0.123 tol=4.3
2024-12-09 08:48:52,468 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.4 pTM=0.583 ipTM=0.121 tol=1.84
2024-12-09 08:48:58,166 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.3 pTM=0.583 ipTM=0.124 tol=2.63
2024-12-09 08:49:03,871 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.3 pTM=0.581 ipTM=0.129 tol=3.07
2024-12-09 08:49:09,584 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.2 pTM=0.581 ipTM=0.132 tol=2.55
2024-12-09 08:49:15,286 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.2 pTM=0.58 ipTM=0.123 tol=1.98
2024-12-09 08:49:20,989 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.2 pTM=0.58 ipTM=0.119 tol=1.62
2024-12-09 08:49:26,688 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.3 pTM=0.581 ipTM=0.12 tol=1.42
2024-12-09 08:49:32,386 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.4 pTM=0.584 ipTM=0.122 tol=1.17
2024-12-09 08:49:38,079 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.2 pTM=0.581 ipTM=0.117 tol=0.809
2024-12-09 08:49:43,774 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.1 pTM=0.582 ipTM=0.122 tol=1.38
2024-12-09 08:49:49,479 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.4 pTM=0.586 ipTM=0.129 tol=3.06
2024-12-09 08:49:55,171 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.4 pTM=0.583 ipTM=0.121 tol=3.63
2024-12-09 08:50:00,873 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.8 pTM=0.582 ipTM=0.12 tol=2.94
2024-12-09 08:50:00,873 alphafold2_multimer_v3_model_2_seed_000 took 176.8s (30 recycles)
2024-12-09 08:50:06,750 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.4 pTM=0.583 ipTM=0.116
2024-12-09 08:50:12,474 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79.3 pTM=0.576 ipTM=0.0944 tol=12.7
2024-12-09 08:50:18,151 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.8 pTM=0.553 ipTM=0.136 tol=15.5
2024-12-09 08:50:23,837 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.9 pTM=0.543 ipTM=0.103 tol=5.24
2024-12-09 08:50:29,526 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.4 pTM=0.597 ipTM=0.133 tol=8.05
2024-12-09 08:50:35,220 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.6 pTM=0.599 ipTM=0.153 tol=2.91
2024-12-09 08:50:40,908 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.6 pTM=0.596 ipTM=0.15 tol=1.79
2024-12-09 08:50:46,600 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.8 pTM=0.586 ipTM=0.142 tol=2.81
2024-12-09 08:50:52,295 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.2 pTM=0.586 ipTM=0.131 tol=1.81
2024-12-09 08:50:57,976 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.9 pTM=0.582 ipTM=0.139 tol=1.26
2024-12-09 08:51:03,670 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.4 pTM=0.588 ipTM=0.146 tol=1.55
2024-12-09 08:51:09,349 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.3 pTM=0.554 ipTM=0.135 tol=6.22
2024-12-09 08:51:15,032 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.3 pTM=0.552 ipTM=0.114 tol=9.45
2024-12-09 08:51:20,719 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.1 pTM=0.549 ipTM=0.113 tol=5.04
2024-12-09 08:51:26,396 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.2 pTM=0.549 ipTM=0.113 tol=2.98
2024-12-09 08:51:32,102 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.2 pTM=0.597 ipTM=0.135 tol=6.75
2024-12-09 08:51:37,798 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.6 pTM=0.59 ipTM=0.148 tol=3.71
2024-12-09 08:51:43,488 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.6 pTM=0.573 ipTM=0.151 tol=2.69
2024-12-09 08:51:49,178 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.2 pTM=0.593 ipTM=0.142 tol=1.58
2024-12-09 08:51:54,865 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.8 pTM=0.589 ipTM=0.15 tol=2.91
2024-12-09 08:52:00,548 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.6 pTM=0.555 ipTM=0.136 tol=6.18
2024-12-09 08:52:06,239 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.6 pTM=0.553 ipTM=0.123 tol=4.47
2024-12-09 08:52:11,918 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.4 pTM=0.551 ipTM=0.124 tol=2.15
2024-12-09 08:52:17,595 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.1 pTM=0.585 ipTM=0.125 tol=5.76
2024-12-09 08:52:23,289 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.8 pTM=0.582 ipTM=0.146 tol=3.25
2024-12-09 08:52:28,978 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.8 pTM=0.557 ipTM=0.129 tol=6.14
2024-12-09 08:52:34,657 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.8 pTM=0.554 ipTM=0.124 tol=2.22
2024-12-09 08:52:40,334 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.7 pTM=0.555 ipTM=0.128 tol=0.682
2024-12-09 08:52:46,028 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78 pTM=0.556 ipTM=0.127 tol=0.868
2024-12-09 08:52:51,718 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.8 pTM=0.556 ipTM=0.122 tol=0.948
2024-12-09 08:52:57,402 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.9 pTM=0.555 ipTM=0.123 tol=0.756
2024-12-09 08:52:57,402 alphafold2_multimer_v3_model_3_seed_000 took 176.4s (30 recycles)
2024-12-09 08:53:03,308 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.6 pTM=0.595 ipTM=0.141
2024-12-09 08:53:09,044 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.3 pTM=0.601 ipTM=0.123 tol=9.98
2024-12-09 08:53:14,764 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=79.6 pTM=0.6 ipTM=0.119 tol=8.59
2024-12-09 08:53:20,486 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.9 pTM=0.609 ipTM=0.137 tol=2.06
2024-12-09 08:53:26,207 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.9 pTM=0.61 ipTM=0.139 tol=1.41
2024-12-09 08:53:31,926 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=80.2 pTM=0.613 ipTM=0.141 tol=1.23
2024-12-09 08:53:37,652 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=80.2 pTM=0.611 ipTM=0.136 tol=1.58
2024-12-09 08:53:43,381 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=80.5 pTM=0.609 ipTM=0.131 tol=2.46
2024-12-09 08:53:49,112 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=80.4 pTM=0.608 ipTM=0.129 tol=1.42
2024-12-09 08:53:54,836 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=80.4 pTM=0.608 ipTM=0.129 tol=0.873
2024-12-09 08:54:00,564 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=80.9 pTM=0.608 ipTM=0.131 tol=0.881
2024-12-09 08:54:06,278 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=80.2 pTM=0.607 ipTM=0.131 tol=1.01
2024-12-09 08:54:12,004 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=80.4 pTM=0.606 ipTM=0.124 tol=0.452
2024-12-09 08:54:12,004 alphafold2_multimer_v3_model_4_seed_000 took 74.4s (12 recycles)
2024-12-09 08:54:17,864 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.2 pTM=0.537 ipTM=0.109
2024-12-09 08:54:23,556 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.9 pTM=0.534 ipTM=0.105 tol=3.46
2024-12-09 08:54:29,229 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=77.3 pTM=0.538 ipTM=0.11 tol=6.05
2024-12-09 08:54:34,917 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=78 pTM=0.541 ipTM=0.0986 tol=2.87
2024-12-09 08:54:40,610 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78 pTM=0.542 ipTM=0.101 tol=1.77
2024-12-09 08:54:46,300 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78 pTM=0.54 ipTM=0.0953 tol=7.96
2024-12-09 08:54:51,989 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.7 pTM=0.54 ipTM=0.0961 tol=7.57
2024-12-09 08:54:57,692 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.6 pTM=0.579 ipTM=0.0916 tol=9.24
2024-12-09 08:55:03,394 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.5 pTM=0.578 ipTM=0.102 tol=8.68
2024-12-09 08:55:09,088 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.7 pTM=0.543 ipTM=0.105 tol=6.62
2024-12-09 08:55:14,790 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.4 pTM=0.547 ipTM=0.0966 tol=3.22
2024-12-09 08:55:20,475 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77.7 pTM=0.543 ipTM=0.0986 tol=1.9
2024-12-09 08:55:26,159 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77.7 pTM=0.542 ipTM=0.095 tol=1.82
2024-12-09 08:55:31,848 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=77.7 pTM=0.544 ipTM=0.0974 tol=1.98
2024-12-09 08:55:37,538 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78 pTM=0.546 ipTM=0.0977 tol=1.61
2024-12-09 08:55:43,238 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=77.9 pTM=0.545 ipTM=0.0974 tol=1.65
2024-12-09 08:55:48,924 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.7 pTM=0.541 ipTM=0.101 tol=1.58
2024-12-09 08:55:54,623 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.1 pTM=0.545 ipTM=0.102 tol=1.12
2024-12-09 08:56:00,317 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.4 pTM=0.546 ipTM=0.0986 tol=1.01
2024-12-09 08:56:06,004 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.8 pTM=0.543 ipTM=0.0994 tol=1.65
2024-12-09 08:56:11,688 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.9 pTM=0.546 ipTM=0.104 tol=1.43
2024-12-09 08:56:17,374 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.1 pTM=0.546 ipTM=0.11 tol=1.23
2024-12-09 08:56:23,060 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.1 pTM=0.549 ipTM=0.101 tol=2.19
2024-12-09 08:56:28,744 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78 pTM=0.546 ipTM=0.105 tol=1.99
2024-12-09 08:56:34,441 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.6 pTM=0.55 ipTM=0.0906 tol=9.01
2024-12-09 08:56:40,120 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.4 pTM=0.553 ipTM=0.0959 tol=9.05
2024-12-09 08:56:45,804 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.5 pTM=0.556 ipTM=0.0968 tol=2.41
2024-12-09 08:56:51,494 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.7 pTM=0.558 ipTM=0.097 tol=1.88
2024-12-09 08:56:57,189 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.9 pTM=0.559 ipTM=0.0897 tol=6.96
2024-12-09 08:57:02,876 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.7 pTM=0.557 ipTM=0.0914 tol=8.98
2024-12-09 08:57:08,573 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.9 pTM=0.561 ipTM=0.121 tol=2.39
2024-12-09 08:57:08,574 alphafold2_multimer_v3_model_5_seed_000 took 176.4s (30 recycles)
2024-12-09 08:57:08,748 reranking models by 'multimer' metric
2024-12-09 08:57:10,888 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 08:57:36,164 Relaxation took 27.4s
2024-12-09 08:57:36,164 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.4 pTM=0.606 ipTM=0.124
2024-12-09 08:57:57,750 Relaxation took 21.6s
2024-12-09 08:57:57,751 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.1 pTM=0.557 ipTM=0.128
2024-12-09 08:58:22,416 Relaxation took 24.7s
2024-12-09 08:58:22,416 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.8 pTM=0.582 ipTM=0.12
2024-12-09 08:58:43,185 Relaxation took 20.8s
2024-12-09 08:58:43,185 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.9 pTM=0.561 ipTM=0.121
2024-12-09 08:59:11,767 Relaxation took 28.6s
2024-12-09 08:59:11,767 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.9 pTM=0.555 ipTM=0.123
2024-12-09 08:59:12,814 Done