2024-12-09 08:33:00,049 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 08:33:00,368 Running on GPU
2024-12-09 08:33:02,141 Found 6 citations for tools or databases
2024-12-09 08:33:02,141 Query 1/1: UBE3A_TRPV5 (length 1604)
2024-12-09 08:33:02,416 Sleeping for 7s. Reason: PENDING
2024-12-09 08:33:09,681 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:33:16,940 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:33:23,192 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:33:33,459 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:33:40,718 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:33:49,975 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:33:58,230 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:34:06,494 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:34:13,758 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:34:20,015 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:34:27,269 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:34:32,524 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:34:38,777 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:34:44,037 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:34:53,301 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:35:01,562 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:35:10,829 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:35:21,087 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:35:28,344 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:35:34,596 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:35:41,858 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:35:49,113 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:35:56,374 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:36:01,628 Sleeping for 9s. Reason: RUNNING
2024-12-09 08:36:10,888 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:36:21,151 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:36:28,406 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:36:34,667 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:36:39,930 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:36:49,124 Sleeping for 8s. Reason: PENDING
2024-12-09 08:36:57,377 Sleeping for 6s. Reason: PENDING
2024-12-09 08:37:03,637 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:37:09,893 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:37:15,153 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:37:21,410 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:37:26,669 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:37:34,929 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:37:43,184 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:37:50,448 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:37:58,714 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:38:05,967 Sleeping for 8s. Reason: RUNNING
2024-12-09 08:38:14,233 Sleeping for 6s. Reason: RUNNING
2024-12-09 08:38:20,488 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:38:27,750 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:38:38,011 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:38:45,270 Sleeping for 5s. Reason: RUNNING
2024-12-09 08:38:50,528 Sleeping for 10s. Reason: RUNNING
2024-12-09 08:39:00,788 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:39:08,049 Sleeping for 7s. Reason: RUNNING
2024-12-09 08:39:19,826 Setting max_seq=508, max_extra_seq=2048
2024-12-09 08:42:52,881 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.3 pTM=0.462 ipTM=0.185
2024-12-09 08:44:11,939 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.8 pTM=0.472 ipTM=0.194 tol=8.48
2024-12-09 08:45:31,150 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.7 pTM=0.477 ipTM=0.191 tol=3.08
2024-12-09 08:46:50,444 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.1 pTM=0.476 ipTM=0.191 tol=1.72
2024-12-09 08:48:09,724 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.9 pTM=0.473 ipTM=0.192 tol=1.56
2024-12-09 08:49:28,985 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.8 pTM=0.469 ipTM=0.188 tol=1.64
2024-12-09 08:50:48,215 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.9 pTM=0.469 ipTM=0.191 tol=2.1
2024-12-09 08:52:07,455 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.468 ipTM=0.188 tol=1.86
2024-12-09 08:53:26,680 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.1 pTM=0.472 ipTM=0.191 tol=2.32
2024-12-09 08:54:45,915 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.8 pTM=0.469 ipTM=0.19 tol=1.62
2024-12-09 08:56:05,088 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.1 pTM=0.473 ipTM=0.193 tol=2.16
2024-12-09 08:57:24,194 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.2 pTM=0.474 ipTM=0.203 tol=1.19
2024-12-09 08:58:43,360 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.2 pTM=0.476 ipTM=0.197 tol=1.53
2024-12-09 09:00:02,571 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.2 pTM=0.475 ipTM=0.194 tol=0.979
2024-12-09 09:01:21,748 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74.2 pTM=0.477 ipTM=0.201 tol=1.73
2024-12-09 09:02:40,939 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74 pTM=0.479 ipTM=0.252 tol=1.47
2024-12-09 09:04:00,135 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74 pTM=0.478 ipTM=0.21 tol=1.65
2024-12-09 09:05:19,381 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.2 pTM=0.476 ipTM=0.209 tol=1.58
2024-12-09 09:06:38,625 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.3 pTM=0.48 ipTM=0.222 tol=1.3
2024-12-09 09:07:57,929 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.2 pTM=0.479 ipTM=0.226 tol=1.28
2024-12-09 09:09:17,183 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.4 pTM=0.482 ipTM=0.221 tol=1.73
2024-12-09 09:10:36,404 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.2 pTM=0.478 ipTM=0.227 tol=1.52
2024-12-09 09:11:55,622 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.1 pTM=0.478 ipTM=0.212 tol=1.31
2024-12-09 09:13:14,848 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.1 pTM=0.477 ipTM=0.242 tol=1.59
2024-12-09 09:14:34,076 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.1 pTM=0.477 ipTM=0.208 tol=1.27
2024-12-09 09:15:53,288 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.2 pTM=0.477 ipTM=0.211 tol=1.22
2024-12-09 09:17:12,474 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.2 pTM=0.475 ipTM=0.202 tol=1.78
2024-12-09 09:18:31,682 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.9 pTM=0.475 ipTM=0.229 tol=2.27
2024-12-09 09:19:50,872 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.9 pTM=0.479 ipTM=0.221 tol=1.08
2024-12-09 09:21:10,071 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74 pTM=0.477 ipTM=0.231 tol=1.12
2024-12-09 09:22:29,297 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.2 pTM=0.479 ipTM=0.22 tol=0.859
2024-12-09 09:22:29,299 alphafold2_multimer_v3_model_1_seed_000 took 2584.2s (30 recycles)
2024-12-09 09:23:50,182 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.8 pTM=0.475 ipTM=0.194
2024-12-09 09:25:09,628 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.7 pTM=0.485 ipTM=0.193 tol=7.93
2024-12-09 09:26:29,047 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.9 pTM=0.481 ipTM=0.193 tol=5.82
2024-12-09 09:27:48,454 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.6 pTM=0.485 ipTM=0.201 tol=3.3
2024-12-09 09:29:07,851 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.6 pTM=0.482 ipTM=0.196 tol=1.63
2024-12-09 09:30:27,281 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.5 pTM=0.48 ipTM=0.195 tol=1.29
2024-12-09 09:31:46,705 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.6 pTM=0.479 ipTM=0.195 tol=1.29
2024-12-09 09:33:06,137 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.6 pTM=0.479 ipTM=0.197 tol=1.03
2024-12-09 09:34:25,570 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.8 pTM=0.48 ipTM=0.198 tol=1.21
2024-12-09 09:35:44,970 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.6 pTM=0.481 ipTM=0.201 tol=1.69
2024-12-09 09:37:04,323 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.7 pTM=0.481 ipTM=0.201 tol=1.2
2024-12-09 09:38:23,659 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.9 pTM=0.483 ipTM=0.198 tol=0.84
2024-12-09 09:39:43,013 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.8 pTM=0.484 ipTM=0.2 tol=0.823
2024-12-09 09:41:02,359 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.6 pTM=0.481 ipTM=0.199 tol=0.995
2024-12-09 09:42:21,738 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.8 pTM=0.483 ipTM=0.198 tol=0.948
2024-12-09 09:43:41,090 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.3 pTM=0.479 ipTM=0.197 tol=1
2024-12-09 09:45:00,491 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.5 pTM=0.48 ipTM=0.198 tol=0.872
2024-12-09 09:46:19,931 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.9 pTM=0.481 ipTM=0.197 tol=0.817
2024-12-09 09:47:39,375 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.9 pTM=0.483 ipTM=0.197 tol=0.971
2024-12-09 09:48:58,767 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.8 pTM=0.483 ipTM=0.198 tol=0.791
2024-12-09 09:50:18,159 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.9 pTM=0.48 ipTM=0.198 tol=0.622
2024-12-09 09:51:37,594 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.8 pTM=0.482 ipTM=0.2 tol=0.824
2024-12-09 09:52:57,039 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.9 pTM=0.482 ipTM=0.199 tol=0.983
2024-12-09 09:54:16,490 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.7 pTM=0.48 ipTM=0.198 tol=0.671
2024-12-09 09:55:35,910 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.6 pTM=0.481 ipTM=0.196 tol=0.783
2024-12-09 09:56:55,270 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.8 pTM=0.483 ipTM=0.198 tol=0.802
2024-12-09 09:58:14,610 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.7 pTM=0.48 ipTM=0.197 tol=0.857
2024-12-09 09:59:33,995 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.6 pTM=0.48 ipTM=0.196 tol=1.11
2024-12-09 10:00:53,423 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.5 pTM=0.481 ipTM=0.198 tol=1.31
2024-12-09 10:02:12,837 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.8 pTM=0.482 ipTM=0.199 tol=0.957
2024-12-09 10:03:32,252 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.8 pTM=0.48 ipTM=0.197 tol=1.28
2024-12-09 10:03:32,253 alphafold2_multimer_v3_model_2_seed_000 took 2461.4s (30 recycles)
2024-12-09 10:04:53,203 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.9 pTM=0.468 ipTM=0.184
2024-12-09 10:06:12,601 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.4 pTM=0.463 ipTM=0.191 tol=6.61
2024-12-09 10:07:31,988 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.6 pTM=0.459 ipTM=0.192 tol=3.8
2024-12-09 10:08:51,358 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.7 pTM=0.459 ipTM=0.192 tol=2.85
2024-12-09 10:10:10,760 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.9 pTM=0.461 ipTM=0.189 tol=1.72
2024-12-09 10:11:30,154 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.1 pTM=0.462 ipTM=0.19 tol=1.44
2024-12-09 10:12:49,555 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.1 pTM=0.461 ipTM=0.189 tol=1.98
2024-12-09 10:14:08,969 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.1 pTM=0.461 ipTM=0.188 tol=1.53
2024-12-09 10:15:28,317 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.2 pTM=0.462 ipTM=0.19 tol=3.1
2024-12-09 10:16:47,639 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.3 pTM=0.464 ipTM=0.191 tol=2.46
2024-12-09 10:18:06,987 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=72.3 pTM=0.465 ipTM=0.19 tol=2.6
2024-12-09 10:19:26,307 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.4 pTM=0.466 ipTM=0.189 tol=2.52
2024-12-09 10:20:45,601 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.3 pTM=0.463 ipTM=0.186 tol=2.37
2024-12-09 10:22:04,896 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.2 pTM=0.463 ipTM=0.189 tol=3.2
2024-12-09 10:23:24,286 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72.2 pTM=0.464 ipTM=0.19 tol=3.56
2024-12-09 10:24:43,659 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72 pTM=0.462 ipTM=0.19 tol=2.29
2024-12-09 10:26:03,056 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72.2 pTM=0.464 ipTM=0.191 tol=1.36
2024-12-09 10:27:22,448 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.4 pTM=0.466 ipTM=0.191 tol=1.51
2024-12-09 10:28:41,888 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=72.3 pTM=0.466 ipTM=0.191 tol=1.82
2024-12-09 10:30:01,309 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72.1 pTM=0.464 ipTM=0.19 tol=2.19
2024-12-09 10:31:20,670 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.2 pTM=0.462 ipTM=0.189 tol=2.18
2024-12-09 10:32:40,025 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.3 pTM=0.465 ipTM=0.19 tol=1.49
2024-12-09 10:33:59,392 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.4 pTM=0.467 ipTM=0.189 tol=2.27
2024-12-09 10:35:18,757 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.2 pTM=0.463 ipTM=0.189 tol=1.86
2024-12-09 10:36:38,119 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.2 pTM=0.465 ipTM=0.189 tol=2.25
2024-12-09 10:37:57,453 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.4 pTM=0.469 ipTM=0.19 tol=1.68
2024-12-09 10:39:16,751 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.2 pTM=0.464 ipTM=0.189 tol=2.06
2024-12-09 10:40:36,107 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.4 pTM=0.467 ipTM=0.19 tol=2.63
2024-12-09 10:41:55,503 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.3 pTM=0.465 ipTM=0.188 tol=3.15
2024-12-09 10:43:14,857 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.2 pTM=0.464 ipTM=0.188 tol=3.12
2024-12-09 10:44:34,061 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.4 pTM=0.465 ipTM=0.19 tol=2.79
2024-12-09 10:44:34,062 alphafold2_multimer_v3_model_3_seed_000 took 2460.3s (30 recycles)
2024-12-09 10:45:54,681 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.9 pTM=0.495 ipTM=0.263
2024-12-09 10:47:13,908 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72.2 pTM=0.489 ipTM=0.207 tol=10.3
2024-12-09 10:48:33,189 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.2 pTM=0.477 ipTM=0.199 tol=6.27
2024-12-09 10:49:52,518 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.4 pTM=0.475 ipTM=0.195 tol=3.25
2024-12-09 10:51:11,890 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.6 pTM=0.477 ipTM=0.196 tol=1.28
2024-12-09 10:52:31,374 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.4 pTM=0.475 ipTM=0.195 tol=1.26
2024-12-09 10:53:50,751 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.6 pTM=0.476 ipTM=0.197 tol=1.64
2024-12-09 10:55:10,108 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.2 pTM=0.472 ipTM=0.195 tol=1.69
2024-12-09 10:56:29,482 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.5 pTM=0.474 ipTM=0.197 tol=3.62
2024-12-09 10:57:48,874 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.4 pTM=0.473 ipTM=0.195 tol=3.71
2024-12-09 10:59:08,256 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.8 pTM=0.477 ipTM=0.196 tol=1.83
2024-12-09 11:00:27,682 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.4 pTM=0.473 ipTM=0.195 tol=1.34
2024-12-09 11:01:47,111 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.6 pTM=0.475 ipTM=0.195 tol=1.67
2024-12-09 11:03:06,554 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.1 pTM=0.471 ipTM=0.193 tol=1.64
2024-12-09 11:04:25,915 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.4 pTM=0.474 ipTM=0.198 tol=1.83
2024-12-09 11:05:45,300 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.1 pTM=0.473 ipTM=0.199 tol=2.31
2024-12-09 11:07:04,707 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.4 pTM=0.475 ipTM=0.2 tol=0.944
2024-12-09 11:08:24,153 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.3 pTM=0.473 ipTM=0.196 tol=1.67
2024-12-09 11:09:43,598 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.3 pTM=0.473 ipTM=0.199 tol=1.93
2024-12-09 11:11:03,077 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.2 pTM=0.474 ipTM=0.196 tol=1.29
2024-12-09 11:12:22,542 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.6 pTM=0.473 ipTM=0.196 tol=1.62
2024-12-09 11:13:41,965 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.2 pTM=0.471 ipTM=0.198 tol=1.96
2024-12-09 11:15:01,367 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.5 pTM=0.473 ipTM=0.196 tol=2.04
2024-12-09 11:16:20,775 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.5 pTM=0.473 ipTM=0.194 tol=1.55
2024-12-09 11:17:40,219 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.2 pTM=0.471 ipTM=0.196 tol=2.1
2024-12-09 11:18:59,701 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.4 pTM=0.473 ipTM=0.192 tol=2.45
2024-12-09 11:20:19,021 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.6 pTM=0.475 ipTM=0.192 tol=1.68
2024-12-09 11:21:38,400 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.2 pTM=0.471 ipTM=0.193 tol=1.63
2024-12-09 11:22:57,767 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.2 pTM=0.471 ipTM=0.197 tol=1.31
2024-12-09 11:24:17,121 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.3 pTM=0.471 ipTM=0.194 tol=1.81
2024-12-09 11:25:36,535 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.4 pTM=0.47 ipTM=0.194 tol=1.38
2024-12-09 11:25:36,537 alphafold2_multimer_v3_model_4_seed_000 took 2460.9s (30 recycles)
2024-12-09 11:26:57,399 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.9 pTM=0.469 ipTM=0.187
2024-12-09 11:28:16,697 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.3 pTM=0.481 ipTM=0.192 tol=9.16
2024-12-09 11:29:35,974 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.8 pTM=0.479 ipTM=0.195 tol=3.2
2024-12-09 11:30:55,197 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72 pTM=0.478 ipTM=0.196 tol=2.67
2024-12-09 11:32:14,430 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.2 pTM=0.477 ipTM=0.194 tol=1.8
2024-12-09 11:33:33,682 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.3 pTM=0.479 ipTM=0.195 tol=2.77
2024-12-09 11:34:53,026 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.6 pTM=0.48 ipTM=0.196 tol=1.96
2024-12-09 11:36:12,409 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.5 pTM=0.479 ipTM=0.194 tol=1.2
2024-12-09 11:37:31,764 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.4 pTM=0.477 ipTM=0.196 tol=1.47
2024-12-09 11:38:51,058 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.4 pTM=0.479 ipTM=0.197 tol=1.58
2024-12-09 11:40:10,397 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.8 pTM=0.482 ipTM=0.198 tol=1.62
2024-12-09 11:41:29,716 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.7 pTM=0.482 ipTM=0.195 tol=1.52
2024-12-09 11:42:49,016 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.5 pTM=0.48 ipTM=0.197 tol=1.89
2024-12-09 11:44:08,230 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.2 pTM=0.476 ipTM=0.196 tol=1.04
2024-12-09 11:45:27,482 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.3 pTM=0.477 ipTM=0.197 tol=2.15
2024-12-09 11:46:46,742 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.1 pTM=0.478 ipTM=0.2 tol=1.33
2024-12-09 11:48:05,909 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.1 pTM=0.479 ipTM=0.215 tol=2.54
2024-12-09 11:49:25,138 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.2 pTM=0.476 ipTM=0.199 tol=1.8
2024-12-09 11:50:44,401 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.3 pTM=0.475 ipTM=0.198 tol=1.1
2024-12-09 11:52:03,660 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.9 pTM=0.472 ipTM=0.196 tol=1.25
2024-12-09 11:53:22,991 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.1 pTM=0.471 ipTM=0.196 tol=1.53
2024-12-09 11:54:42,258 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.1 pTM=0.473 ipTM=0.198 tol=2.04
2024-12-09 11:56:01,522 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.2 pTM=0.475 ipTM=0.195 tol=1.56
2024-12-09 11:57:20,751 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.1 pTM=0.471 ipTM=0.194 tol=1.47
2024-12-09 11:58:40,011 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.9 pTM=0.472 ipTM=0.197 tol=1.24
2024-12-09 11:59:59,256 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.2 pTM=0.473 ipTM=0.197 tol=1.55
2024-12-09 12:01:18,510 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.9 pTM=0.471 ipTM=0.196 tol=1.55
2024-12-09 12:02:37,726 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.9 pTM=0.472 ipTM=0.198 tol=1.96
2024-12-09 12:03:56,978 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.9 pTM=0.47 ipTM=0.196 tol=1.44
2024-12-09 12:05:16,229 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.8 pTM=0.468 ipTM=0.194 tol=2.06
2024-12-09 12:06:35,539 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.9 pTM=0.47 ipTM=0.195 tol=2.39
2024-12-09 12:06:35,541 alphafold2_multimer_v3_model_5_seed_000 took 2457.5s (30 recycles)
2024-12-09 12:06:37,065 reranking models by 'multimer' metric
2024-12-09 12:06:40,743 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 12:08:26,122 Relaxation took 109.1s
2024-12-09 12:08:26,122 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.2 pTM=0.479 ipTM=0.22
2024-12-09 12:10:37,253 Relaxation took 131.1s
2024-12-09 12:10:37,253 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.8 pTM=0.48 ipTM=0.197
2024-12-09 12:13:26,388 Relaxation took 169.1s
2024-12-09 12:13:26,388 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.9 pTM=0.47 ipTM=0.195
2024-12-09 12:16:44,941 Relaxation took 198.6s
2024-12-09 12:16:44,942 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.4 pTM=0.47 ipTM=0.194
2024-12-09 12:20:19,159 Relaxation took 214.2s
2024-12-09 12:20:19,160 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.4 pTM=0.465 ipTM=0.19
2024-12-09 12:20:23,043 Done