2024-12-09 09:04:40,948 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-09 09:04:41,250 Running on GPU 2024-12-09 09:04:41,979 Found 6 citations for tools or databases 2024-12-09 09:04:41,979 Query 1/1: UBE4A_C3orf18 (length 1228) 2024-12-09 09:04:42,245 Sleeping for 7s. Reason: PENDING 2024-12-09 09:04:49,506 Sleeping for 7s. Reason: RUNNING 2024-12-09 09:04:56,767 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:05:05,026 Sleeping for 6s. Reason: RUNNING 2024-12-09 09:05:11,289 Sleeping for 6s. Reason: RUNNING 2024-12-09 09:05:17,547 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:05:25,815 Sleeping for 9s. Reason: RUNNING 2024-12-09 09:05:35,092 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:05:43,348 Sleeping for 5s. Reason: RUNNING 2024-12-09 09:05:48,606 Sleeping for 5s. Reason: RUNNING 2024-12-09 09:05:53,863 Sleeping for 6s. Reason: RUNNING 2024-12-09 09:06:00,120 Sleeping for 6s. Reason: RUNNING 2024-12-09 09:06:06,383 Sleeping for 9s. Reason: RUNNING 2024-12-09 09:06:15,649 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:06:23,914 Sleeping for 6s. Reason: RUNNING 2024-12-09 09:06:30,182 Sleeping for 7s. Reason: RUNNING 2024-12-09 09:06:37,438 Sleeping for 5s. Reason: RUNNING 2024-12-09 09:06:42,690 Sleeping for 6s. Reason: RUNNING 2024-12-09 09:06:48,954 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:06:57,209 Sleeping for 10s. Reason: RUNNING 2024-12-09 09:07:09,201 Sleeping for 5s. Reason: PENDING 2024-12-09 09:07:14,462 Sleeping for 5s. Reason: RUNNING 2024-12-09 09:07:19,720 Sleeping for 10s. Reason: RUNNING 2024-12-09 09:07:29,984 Sleeping for 7s. Reason: RUNNING 2024-12-09 09:07:37,238 Sleeping for 9s. Reason: RUNNING 2024-12-09 09:07:46,494 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:07:54,758 Sleeping for 9s. Reason: RUNNING 2024-12-09 09:08:04,016 Sleeping for 5s. Reason: RUNNING 2024-12-09 09:08:09,270 Sleeping for 8s. Reason: RUNNING 2024-12-09 09:08:17,532 Sleeping for 7s. Reason: RUNNING 2024-12-09 09:08:24,797 Sleeping for 10s. Reason: RUNNING 2024-12-09 09:08:37,711 Setting max_seq=508, max_extra_seq=2048 2024-12-09 09:11:22,365 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.4 pTM=0.735 ipTM=0.249 2024-12-09 09:11:59,326 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.9 pTM=0.743 ipTM=0.258 tol=3.44 2024-12-09 09:12:36,476 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.7 pTM=0.75 ipTM=0.26 tol=5.64 2024-12-09 09:13:13,734 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.1 pTM=0.751 ipTM=0.277 tol=1.57 2024-12-09 09:13:51,000 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.8 pTM=0.749 ipTM=0.289 tol=1.19 2024-12-09 09:14:28,321 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.1 pTM=0.75 ipTM=0.29 tol=0.786 2024-12-09 09:15:05,666 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.2 pTM=0.75 ipTM=0.27 tol=1.17 2024-12-09 09:15:43,022 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.9 pTM=0.748 ipTM=0.261 tol=1.57 2024-12-09 09:16:20,371 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.8 pTM=0.747 ipTM=0.256 tol=1.27 2024-12-09 09:16:57,728 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.8 pTM=0.747 ipTM=0.259 tol=1.79 2024-12-09 09:17:35,093 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.8 pTM=0.747 ipTM=0.257 tol=1.52 2024-12-09 09:18:12,480 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.1 pTM=0.751 ipTM=0.277 tol=1.41 2024-12-09 09:18:49,871 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.9 pTM=0.75 ipTM=0.281 tol=1.36 2024-12-09 09:19:27,280 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.9 pTM=0.749 ipTM=0.266 tol=2.04 2024-12-09 09:20:04,654 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.7 pTM=0.746 ipTM=0.254 tol=1.67 2024-12-09 09:20:42,018 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.2 pTM=0.742 ipTM=0.257 tol=1.32 2024-12-09 09:21:19,433 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.8 pTM=0.746 ipTM=0.25 tol=1.08 2024-12-09 09:21:56,863 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.6 pTM=0.746 ipTM=0.251 tol=1.78 2024-12-09 09:22:34,249 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.2 pTM=0.739 ipTM=0.24 tol=1.26 2024-12-09 09:23:11,641 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.4 pTM=0.742 ipTM=0.25 tol=1.87 2024-12-09 09:23:49,064 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.4 pTM=0.744 ipTM=0.239 tol=1.03 2024-12-09 09:24:26,503 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.6 pTM=0.748 ipTM=0.256 tol=2.1 2024-12-09 09:25:03,902 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.3 pTM=0.742 ipTM=0.247 tol=1.56 2024-12-09 09:25:41,287 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.3 pTM=0.744 ipTM=0.262 tol=1.55 2024-12-09 09:26:18,661 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.2 pTM=0.744 ipTM=0.255 tol=1.3 2024-12-09 09:26:56,096 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.6 pTM=0.748 ipTM=0.26 tol=1.63 2024-12-09 09:27:33,489 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.2 pTM=0.742 ipTM=0.251 tol=1.83 2024-12-09 09:28:10,870 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.1 pTM=0.74 ipTM=0.237 tol=2.07 2024-12-09 09:28:48,254 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.9 pTM=0.738 ipTM=0.234 tol=3.09 2024-12-09 09:29:25,673 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.4 pTM=0.743 ipTM=0.233 tol=2.67 2024-12-09 09:30:03,057 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.4 pTM=0.741 ipTM=0.245 tol=1.89 2024-12-09 09:30:03,058 alphafold2_multimer_v3_model_1_seed_000 took 1280.4s (30 recycles) 2024-12-09 09:30:41,375 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.9 pTM=0.736 ipTM=0.266 2024-12-09 09:31:18,708 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.2 pTM=0.744 ipTM=0.275 tol=3.85 2024-12-09 09:31:56,080 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.1 pTM=0.752 ipTM=0.293 tol=1.74 2024-12-09 09:32:33,445 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=77.5 pTM=0.756 ipTM=0.314 tol=1.59 2024-12-09 09:33:10,828 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=77.8 pTM=0.757 ipTM=0.327 tol=0.829 2024-12-09 09:33:48,207 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=77.5 pTM=0.753 ipTM=0.317 tol=0.758 2024-12-09 09:34:25,627 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77.7 pTM=0.755 ipTM=0.312 tol=1.29 2024-12-09 09:35:03,063 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.6 pTM=0.754 ipTM=0.304 tol=0.9 2024-12-09 09:35:40,482 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.6 pTM=0.755 ipTM=0.31 tol=1.3 2024-12-09 09:36:17,895 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77.6 pTM=0.753 ipTM=0.313 tol=0.783 2024-12-09 09:36:55,292 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.7 pTM=0.755 ipTM=0.314 tol=0.521 2024-12-09 09:37:32,630 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.5 pTM=0.754 ipTM=0.31 tol=0.953 2024-12-09 09:38:09,974 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.4 pTM=0.754 ipTM=0.317 tol=1.25 2024-12-09 09:38:47,343 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.5 pTM=0.754 ipTM=0.312 tol=0.736 2024-12-09 09:39:24,733 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.6 pTM=0.756 ipTM=0.304 tol=0.713 2024-12-09 09:40:02,125 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=77.5 pTM=0.753 ipTM=0.299 tol=0.459 2024-12-09 09:40:02,126 alphafold2_multimer_v3_model_2_seed_000 took 598.2s (15 recycles) 2024-12-09 09:40:40,353 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=75.6 pTM=0.739 ipTM=0.256 2024-12-09 09:41:17,757 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.5 pTM=0.746 ipTM=0.253 tol=5.38 2024-12-09 09:41:55,165 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77.1 pTM=0.753 ipTM=0.262 tol=3.84 2024-12-09 09:42:32,580 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.2 pTM=0.755 ipTM=0.268 tol=2.54 2024-12-09 09:43:09,987 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.3 pTM=0.755 ipTM=0.29 tol=2.89 2024-12-09 09:43:47,383 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.2 pTM=0.753 ipTM=0.292 tol=1.53 2024-12-09 09:44:24,808 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77.1 pTM=0.753 ipTM=0.269 tol=1.79 2024-12-09 09:45:02,226 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.9 pTM=0.751 ipTM=0.262 tol=1.33 2024-12-09 09:45:39,693 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.4 pTM=0.757 ipTM=0.266 tol=2.53 2024-12-09 09:46:17,122 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.9 pTM=0.751 ipTM=0.26 tol=3.8 2024-12-09 09:46:54,548 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77 pTM=0.751 ipTM=0.259 tol=1.83 2024-12-09 09:47:31,986 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.2 pTM=0.751 ipTM=0.257 tol=1.92 2024-12-09 09:48:09,430 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.7 pTM=0.757 ipTM=0.261 tol=1.5 2024-12-09 09:48:46,832 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.4 pTM=0.752 ipTM=0.256 tol=0.971 2024-12-09 09:49:24,229 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.6 pTM=0.755 ipTM=0.253 tol=0.66 2024-12-09 09:50:01,614 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.4 pTM=0.752 ipTM=0.256 tol=0.452 2024-12-09 09:50:01,615 alphafold2_multimer_v3_model_3_seed_000 took 598.6s (15 recycles) 2024-12-09 09:50:39,971 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.8 pTM=0.758 ipTM=0.283 2024-12-09 09:51:17,469 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.6 pTM=0.761 ipTM=0.249 tol=2.81 2024-12-09 09:51:54,998 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.1 pTM=0.762 ipTM=0.25 tol=5.62 2024-12-09 09:52:32,465 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.6 pTM=0.764 ipTM=0.328 tol=2.17 2024-12-09 09:53:09,861 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.9 pTM=0.76 ipTM=0.274 tol=3.25 2024-12-09 09:53:47,317 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.8 pTM=0.757 ipTM=0.255 tol=3.48 2024-12-09 09:54:24,795 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.3 pTM=0.762 ipTM=0.316 tol=1.55 2024-12-09 09:55:02,242 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.9 pTM=0.756 ipTM=0.259 tol=1.29 2024-12-09 09:55:39,653 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.8 pTM=0.754 ipTM=0.248 tol=0.913 2024-12-09 09:56:17,073 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.9 pTM=0.754 ipTM=0.278 tol=1.31 2024-12-09 09:56:54,463 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.9 pTM=0.758 ipTM=0.264 tol=2.24 2024-12-09 09:57:31,926 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.3 pTM=0.761 ipTM=0.263 tol=2.19 2024-12-09 09:58:09,334 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.1 pTM=0.756 ipTM=0.266 tol=1.28 2024-12-09 09:58:46,805 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.3 pTM=0.759 ipTM=0.259 tol=1.08 2024-12-09 09:59:24,267 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.2 pTM=0.759 ipTM=0.261 tol=1.08 2024-12-09 10:00:01,739 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.2 pTM=0.755 ipTM=0.261 tol=1.3 2024-12-09 10:00:39,216 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.2 pTM=0.757 ipTM=0.269 tol=0.824 2024-12-09 10:01:16,647 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.9 pTM=0.757 ipTM=0.259 tol=2.1 2024-12-09 10:01:54,103 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.6 pTM=0.754 ipTM=0.254 tol=2.34 2024-12-09 10:02:31,512 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.7 pTM=0.753 ipTM=0.26 tol=0.993 2024-12-09 10:03:08,974 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.1 pTM=0.76 ipTM=0.267 tol=0.656 2024-12-09 10:03:46,447 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.2 pTM=0.76 ipTM=0.261 tol=0.788 2024-12-09 10:04:23,854 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.8 pTM=0.759 ipTM=0.254 tol=2.39 2024-12-09 10:05:01,297 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.9 pTM=0.756 ipTM=0.268 tol=2.71 2024-12-09 10:05:38,729 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.9 pTM=0.756 ipTM=0.264 tol=1.2 2024-12-09 10:06:16,226 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.7 pTM=0.763 ipTM=0.266 tol=1.27 2024-12-09 10:06:53,642 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.9 pTM=0.752 ipTM=0.255 tol=0.747 2024-12-09 10:07:31,072 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.9 pTM=0.751 ipTM=0.26 tol=1.19 2024-12-09 10:08:08,479 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78 pTM=0.759 ipTM=0.268 tol=2.73 2024-12-09 10:08:45,908 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.8 pTM=0.755 ipTM=0.264 tol=2.51 2024-12-09 10:09:23,339 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.8 pTM=0.753 ipTM=0.261 tol=0.895 2024-12-09 10:09:23,340 alphafold2_multimer_v3_model_4_seed_000 took 1160.8s (30 recycles) 2024-12-09 10:10:01,735 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.8 pTM=0.76 ipTM=0.269 2024-12-09 10:10:39,249 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.1 pTM=0.773 ipTM=0.237 tol=7.33 2024-12-09 10:11:16,796 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.8 pTM=0.76 ipTM=0.228 tol=3.26 2024-12-09 10:11:54,347 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=76.9 pTM=0.759 ipTM=0.222 tol=3.6 2024-12-09 10:12:31,826 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.3 pTM=0.749 ipTM=0.212 tol=2.58 2024-12-09 10:13:09,324 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.8 pTM=0.754 ipTM=0.212 tol=1.29 2024-12-09 10:13:46,859 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.9 pTM=0.755 ipTM=0.206 tol=1.94 2024-12-09 10:14:24,385 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.7 pTM=0.753 ipTM=0.205 tol=2.72 2024-12-09 10:15:01,908 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.9 pTM=0.755 ipTM=0.205 tol=2.64 2024-12-09 10:15:39,448 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.7 pTM=0.752 ipTM=0.195 tol=2.64 2024-12-09 10:16:16,948 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.8 pTM=0.754 ipTM=0.206 tol=2.37 2024-12-09 10:16:54,484 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77 pTM=0.757 ipTM=0.204 tol=2.52 2024-12-09 10:17:31,993 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.7 pTM=0.751 ipTM=0.203 tol=2.62 2024-12-09 10:18:09,500 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.7 pTM=0.751 ipTM=0.198 tol=2.54 2024-12-09 10:18:47,033 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.8 pTM=0.753 ipTM=0.201 tol=2.12 2024-12-09 10:19:24,539 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.8 pTM=0.75 ipTM=0.196 tol=2.72 2024-12-09 10:20:02,049 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.9 pTM=0.751 ipTM=0.197 tol=1.74 2024-12-09 10:20:39,520 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.6 pTM=0.749 ipTM=0.192 tol=3.55 2024-12-09 10:21:17,013 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.6 pTM=0.75 ipTM=0.199 tol=2.1 2024-12-09 10:21:54,491 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.7 pTM=0.752 ipTM=0.194 tol=3 2024-12-09 10:22:32,029 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.7 pTM=0.754 ipTM=0.201 tol=3.03 2024-12-09 10:23:09,610 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.9 pTM=0.753 ipTM=0.197 tol=2.95 2024-12-09 10:23:47,115 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.5 pTM=0.75 ipTM=0.199 tol=1.89 2024-12-09 10:24:24,663 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.7 pTM=0.751 ipTM=0.203 tol=1.35 2024-12-09 10:25:02,212 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.8 pTM=0.752 ipTM=0.2 tol=1.44 2024-12-09 10:25:39,805 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.1 pTM=0.754 ipTM=0.199 tol=2.18 2024-12-09 10:26:17,371 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77 pTM=0.75 ipTM=0.197 tol=1.46 2024-12-09 10:26:54,938 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.7 pTM=0.749 ipTM=0.198 tol=2.29 2024-12-09 10:27:32,460 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.4 pTM=0.746 ipTM=0.2 tol=2.27 2024-12-09 10:28:10,033 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.9 pTM=0.755 ipTM=0.199 tol=3.4 2024-12-09 10:28:47,588 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.6 pTM=0.75 ipTM=0.204 tol=2.73 2024-12-09 10:28:47,589 alphafold2_multimer_v3_model_5_seed_000 took 1163.3s (30 recycles) 2024-12-09 10:28:48,489 reranking models by 'multimer' metric 2024-12-09 10:28:52,715 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-09 10:30:27,136 Relaxation took 98.6s 2024-12-09 10:30:27,136 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.5 pTM=0.753 ipTM=0.299 2024-12-09 10:31:32,055 Relaxation took 64.9s 2024-12-09 10:31:32,055 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.8 pTM=0.753 ipTM=0.261 2024-12-09 10:32:57,825 Relaxation took 85.8s 2024-12-09 10:32:57,825 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.4 pTM=0.752 ipTM=0.256 2024-12-09 10:34:33,462 Relaxation took 95.6s 2024-12-09 10:34:33,462 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.4 pTM=0.741 ipTM=0.245 2024-12-09 10:36:22,069 Relaxation took 108.6s 2024-12-09 10:36:22,069 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.6 pTM=0.75 ipTM=0.204 2024-12-09 10:36:24,402 Done