2024-12-09 09:37:48,915 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 09:37:49,210 Running on GPU
2024-12-09 09:37:52,884 Found 6 citations for tools or databases
2024-12-09 09:37:52,884 Query 1/1: UBE4A_FGFR2 (length 1887)
2024-12-09 09:37:53,172 Sleeping for 9s. Reason: PENDING
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2024-12-09 09:42:15,126 Sleeping for 6s. Reason: RUNNING
2024-12-09 09:42:21,379 Sleeping for 5s. Reason: RUNNING
2024-12-09 09:42:26,644 Sleeping for 9s. Reason: RUNNING
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2024-12-09 09:42:43,172 Sleeping for 9s. Reason: RUNNING
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2024-12-09 09:44:05,772 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:44:14,036 Sleeping for 9s. Reason: RUNNING
2024-12-09 09:44:23,300 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:44:33,980 Sleeping for 6s. Reason: PENDING
2024-12-09 09:44:40,234 Sleeping for 9s. Reason: RUNNING
2024-12-09 09:44:49,496 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:44:57,755 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:45:08,015 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:45:16,276 Sleeping for 10s. Reason: RUNNING
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2024-12-09 09:45:35,798 Sleeping for 7s. Reason: RUNNING
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2024-12-09 09:46:24,346 Sleeping for 5s. Reason: RUNNING
2024-12-09 09:46:29,608 Sleeping for 6s. Reason: RUNNING
2024-12-09 09:46:35,872 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:46:46,133 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:46:56,393 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:47:06,657 Sleeping for 7s. Reason: RUNNING
2024-12-09 09:47:13,914 Sleeping for 6s. Reason: RUNNING
2024-12-09 09:47:20,174 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:47:28,432 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:47:38,703 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:47:48,965 Sleeping for 9s. Reason: RUNNING
2024-12-09 09:47:58,229 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:48:08,493 Sleeping for 7s. Reason: RUNNING
2024-12-09 09:48:15,756 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:48:26,016 Sleeping for 6s. Reason: RUNNING
2024-12-09 09:48:39,254 Setting max_seq=508, max_extra_seq=2048
2024-12-09 09:53:42,338 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.5 pTM=0.547 ipTM=0.213
2024-12-09 09:55:56,200 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.6 pTM=0.565 ipTM=0.336 tol=12.6
2024-12-09 09:58:10,123 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.2 pTM=0.567 ipTM=0.355 tol=4.65
2024-12-09 10:00:24,105 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.562 ipTM=0.406 tol=5.43
2024-12-09 10:02:38,056 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.4 pTM=0.566 ipTM=0.365 tol=4.66
2024-12-09 10:04:51,995 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69 pTM=0.573 ipTM=0.373 tol=3.81
2024-12-09 10:07:05,986 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.7 pTM=0.57 ipTM=0.301 tol=2.89
2024-12-09 10:09:20,018 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.1 pTM=0.57 ipTM=0.299 tol=3.64
2024-12-09 10:11:33,998 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69 pTM=0.572 ipTM=0.277 tol=2.69
2024-12-09 10:13:48,013 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.1 pTM=0.569 ipTM=0.272 tol=2.53
2024-12-09 10:16:02,026 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.9 pTM=0.569 ipTM=0.288 tol=1.59
2024-12-09 10:18:16,062 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.9 pTM=0.571 ipTM=0.274 tol=1.97
2024-12-09 10:20:30,013 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.8 pTM=0.57 ipTM=0.284 tol=1.47
2024-12-09 10:22:43,969 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69 pTM=0.569 ipTM=0.285 tol=1.88
2024-12-09 10:24:57,952 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.8 pTM=0.568 ipTM=0.283 tol=2.31
2024-12-09 10:27:11,978 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=68.7 pTM=0.567 ipTM=0.279 tol=1.95
2024-12-09 10:29:26,008 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.9 pTM=0.567 ipTM=0.272 tol=1.95
2024-12-09 10:31:40,026 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.8 pTM=0.565 ipTM=0.258 tol=1.43
2024-12-09 10:33:54,045 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.1 pTM=0.568 ipTM=0.275 tol=1.68
2024-12-09 10:36:08,026 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.1 pTM=0.57 ipTM=0.274 tol=1.23
2024-12-09 10:38:21,956 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.9 pTM=0.57 ipTM=0.283 tol=1.91
2024-12-09 10:40:35,955 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.9 pTM=0.567 ipTM=0.28 tol=1.84
2024-12-09 10:42:49,944 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.1 pTM=0.571 ipTM=0.288 tol=1.49
2024-12-09 10:45:03,974 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.9 pTM=0.567 ipTM=0.27 tol=2.9
2024-12-09 10:47:18,001 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.1 pTM=0.568 ipTM=0.273 tol=1.94
2024-12-09 10:49:32,036 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69 pTM=0.565 ipTM=0.274 tol=2.63
2024-12-09 10:51:46,062 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.1 pTM=0.564 ipTM=0.278 tol=2.35
2024-12-09 10:54:00,100 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.2 pTM=0.565 ipTM=0.296 tol=2.89
2024-12-09 10:56:14,187 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.4 pTM=0.561 ipTM=0.268 tol=3.8
2024-12-09 10:58:28,251 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.9 pTM=0.56 ipTM=0.278 tol=3.82
2024-12-09 11:00:42,279 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69 pTM=0.561 ipTM=0.284 tol=1.92
2024-12-09 11:00:42,281 alphafold2_multimer_v3_model_1_seed_000 took 4317.7s (30 recycles)
2024-12-09 11:02:58,648 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.4 pTM=0.562 ipTM=0.226
2024-12-09 11:05:13,014 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70 pTM=0.568 ipTM=0.266 tol=6.46
2024-12-09 11:07:27,430 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.6 pTM=0.571 ipTM=0.329 tol=5.71
2024-12-09 11:09:41,772 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71 pTM=0.576 ipTM=0.315 tol=17.6
2024-12-09 11:11:56,213 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.9 pTM=0.568 ipTM=0.295 tol=16.1
2024-12-09 11:14:10,698 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.4 pTM=0.566 ipTM=0.271 tol=5.51
2024-12-09 11:16:25,206 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.6 pTM=0.559 ipTM=0.232 tol=8.6
2024-12-09 11:18:39,705 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.4 pTM=0.558 ipTM=0.211 tol=6.19
2024-12-09 11:20:54,170 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.8 pTM=0.559 ipTM=0.216 tol=5.48
2024-12-09 11:23:08,714 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.7 pTM=0.558 ipTM=0.205 tol=6.32
2024-12-09 11:25:23,201 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.7 pTM=0.557 ipTM=0.198 tol=5.13
2024-12-09 11:27:37,794 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=71.4 pTM=0.559 ipTM=0.199 tol=7.69
2024-12-09 11:29:52,250 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.5 pTM=0.56 ipTM=0.206 tol=3.38
2024-12-09 11:32:06,682 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.5 pTM=0.56 ipTM=0.214 tol=2.14
2024-12-09 11:34:21,067 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.5 pTM=0.562 ipTM=0.236 tol=2.21
2024-12-09 11:36:35,517 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.3 pTM=0.561 ipTM=0.218 tol=1.5
2024-12-09 11:38:49,994 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.7 pTM=0.561 ipTM=0.208 tol=3.66
2024-12-09 11:41:04,426 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.7 pTM=0.562 ipTM=0.225 tol=3.98
2024-12-09 11:43:18,891 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.4 pTM=0.561 ipTM=0.219 tol=2.52
2024-12-09 11:45:33,374 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=71.5 pTM=0.56 ipTM=0.204 tol=3.29
2024-12-09 11:47:47,846 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.4 pTM=0.56 ipTM=0.201 tol=2.44
2024-12-09 11:50:02,257 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.4 pTM=0.561 ipTM=0.211 tol=2.8
2024-12-09 11:52:16,623 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.5 pTM=0.562 ipTM=0.213 tol=1.75
2024-12-09 11:54:30,996 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.4 pTM=0.561 ipTM=0.214 tol=3.27
2024-12-09 11:56:45,366 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.6 pTM=0.562 ipTM=0.21 tol=3
2024-12-09 11:58:59,752 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.5 pTM=0.563 ipTM=0.216 tol=2.58
2024-12-09 12:01:14,124 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.6 pTM=0.562 ipTM=0.21 tol=3.68
2024-12-09 12:03:28,515 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.6 pTM=0.56 ipTM=0.202 tol=3.89
2024-12-09 12:05:42,857 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.3 pTM=0.56 ipTM=0.197 tol=4.99
2024-12-09 12:07:57,218 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.4 pTM=0.562 ipTM=0.205 tol=3.38
2024-12-09 12:10:11,499 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.3 pTM=0.562 ipTM=0.213 tol=2.2
2024-12-09 12:10:11,501 alphafold2_multimer_v3_model_2_seed_000 took 4167.1s (30 recycles)
2024-12-09 12:12:27,760 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.546 ipTM=0.196
2024-12-09 12:14:41,909 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.8 pTM=0.555 ipTM=0.204 tol=8.66
2024-12-09 12:16:56,174 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.5 pTM=0.554 ipTM=0.2 tol=5.92
2024-12-09 12:19:10,301 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.6 pTM=0.559 ipTM=0.234 tol=7.56
2024-12-09 12:21:24,495 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.6 pTM=0.556 ipTM=0.216 tol=3.61
2024-12-09 12:23:38,660 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68.9 pTM=0.56 ipTM=0.231 tol=3.57
2024-12-09 12:25:52,807 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.8 pTM=0.56 ipTM=0.23 tol=3.23
2024-12-09 12:28:06,891 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=69.1 pTM=0.56 ipTM=0.257 tol=2.94
2024-12-09 12:30:20,979 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.1 pTM=0.562 ipTM=0.232 tol=2.22
2024-12-09 12:32:35,074 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.2 pTM=0.559 ipTM=0.215 tol=2.19
2024-12-09 12:34:49,187 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.9 pTM=0.559 ipTM=0.22 tol=2.02
2024-12-09 12:37:03,268 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69 pTM=0.559 ipTM=0.223 tol=1.46
2024-12-09 12:39:17,400 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.8 pTM=0.557 ipTM=0.214 tol=2.21
2024-12-09 12:41:31,478 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.2 pTM=0.559 ipTM=0.219 tol=1.92
2024-12-09 12:43:45,610 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.9 pTM=0.557 ipTM=0.217 tol=1.21
2024-12-09 12:45:59,760 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.9 pTM=0.559 ipTM=0.216 tol=1.29
2024-12-09 12:48:13,929 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.1 pTM=0.558 ipTM=0.216 tol=1.18
2024-12-09 12:50:28,084 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.1 pTM=0.558 ipTM=0.224 tol=1.54
2024-12-09 12:52:42,263 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.1 pTM=0.556 ipTM=0.216 tol=1.52
2024-12-09 12:54:56,395 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.2 pTM=0.556 ipTM=0.212 tol=1.5
2024-12-09 12:57:10,609 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.9 pTM=0.552 ipTM=0.204 tol=4.45
2024-12-09 12:59:24,769 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.4 pTM=0.559 ipTM=0.245 tol=5.31
2024-12-09 13:01:38,914 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.2 pTM=0.56 ipTM=0.258 tol=3.34
2024-12-09 13:03:53,052 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.8 pTM=0.563 ipTM=0.257 tol=2.83
2024-12-09 13:06:07,225 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.4 pTM=0.561 ipTM=0.257 tol=4.41
2024-12-09 13:08:21,381 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.6 pTM=0.564 ipTM=0.254 tol=2.55
2024-12-09 13:10:35,554 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.4 pTM=0.56 ipTM=0.255 tol=2.46
2024-12-09 13:12:49,743 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.4 pTM=0.558 ipTM=0.237 tol=4.72
2024-12-09 13:15:03,911 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=69.4 pTM=0.559 ipTM=0.243 tol=3.51
2024-12-09 13:17:18,093 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.4 pTM=0.561 ipTM=0.237 tol=2.99
2024-12-09 13:19:32,300 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.4 pTM=0.56 ipTM=0.245 tol=2.01
2024-12-09 13:19:32,302 alphafold2_multimer_v3_model_3_seed_000 took 4158.7s (30 recycles)
2024-12-09 13:21:48,950 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.7 pTM=0.571 ipTM=0.248
2024-12-09 13:24:03,375 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.4 pTM=0.57 ipTM=0.218 tol=16.6
2024-12-09 13:26:17,718 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.9 pTM=0.574 ipTM=0.212 tol=7.97
2024-12-09 13:28:32,050 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.8 pTM=0.574 ipTM=0.22 tol=6.09
2024-12-09 13:30:46,271 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70 pTM=0.589 ipTM=0.368 tol=5.05
2024-12-09 13:33:00,554 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.2 pTM=0.577 ipTM=0.245 tol=3.42
2024-12-09 13:35:14,856 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.3 pTM=0.584 ipTM=0.35 tol=5.3
2024-12-09 13:37:29,089 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.6 pTM=0.578 ipTM=0.306 tol=5.95
2024-12-09 13:39:43,295 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.2 pTM=0.58 ipTM=0.247 tol=3.38
2024-12-09 13:41:57,516 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.6 pTM=0.585 ipTM=0.299 tol=2.73
2024-12-09 13:44:11,803 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.1 pTM=0.572 ipTM=0.217 tol=5.24
2024-12-09 13:46:26,013 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69 pTM=0.575 ipTM=0.227 tol=2.87
2024-12-09 13:48:40,248 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69 pTM=0.573 ipTM=0.222 tol=4.16
2024-12-09 13:50:54,473 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.9 pTM=0.574 ipTM=0.224 tol=2.56
2024-12-09 13:53:08,740 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.9 pTM=0.571 ipTM=0.214 tol=4.18
2024-12-09 13:55:22,959 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.1 pTM=0.575 ipTM=0.223 tol=3.82
2024-12-09 13:57:37,249 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.8 pTM=0.571 ipTM=0.215 tol=3.53
2024-12-09 13:59:51,559 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.8 pTM=0.573 ipTM=0.22 tol=3.5
2024-12-09 14:02:05,860 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.9 pTM=0.573 ipTM=0.218 tol=6.29
2024-12-09 14:04:20,200 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.7 pTM=0.574 ipTM=0.221 tol=4.88
2024-12-09 14:06:34,573 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.1 pTM=0.573 ipTM=0.216 tol=4.95
2024-12-09 14:08:48,932 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.1 pTM=0.574 ipTM=0.217 tol=2.8
2024-12-09 14:11:03,237 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.2 pTM=0.576 ipTM=0.218 tol=2.7
2024-12-09 14:13:17,598 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.9 pTM=0.576 ipTM=0.217 tol=2.64
2024-12-09 14:15:31,916 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.1 pTM=0.576 ipTM=0.221 tol=2.11
2024-12-09 14:17:46,255 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69 pTM=0.575 ipTM=0.218 tol=1.58
2024-12-09 14:20:00,554 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.2 pTM=0.576 ipTM=0.217 tol=3.18
2024-12-09 14:22:14,802 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.1 pTM=0.573 ipTM=0.222 tol=6.4
2024-12-09 14:24:29,082 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69 pTM=0.574 ipTM=0.221 tol=2.37
2024-12-09 14:26:43,402 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.9 pTM=0.572 ipTM=0.214 tol=3.05
2024-12-09 14:28:57,658 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.1 pTM=0.576 ipTM=0.226 tol=3.67
2024-12-09 14:28:57,660 alphafold2_multimer_v3_model_4_seed_000 took 4163.1s (30 recycles)
2024-12-09 14:31:14,032 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.3 pTM=0.562 ipTM=0.229
2024-12-09 14:33:28,465 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.6 pTM=0.561 ipTM=0.203 tol=11.7
2024-12-09 14:35:42,778 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.9 pTM=0.563 ipTM=0.217 tol=5.69
2024-12-09 14:37:57,082 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.2 pTM=0.56 ipTM=0.22 tol=6.75
2024-12-09 14:40:11,392 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.4 pTM=0.559 ipTM=0.213 tol=4.63
2024-12-09 14:42:25,743 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.5 pTM=0.56 ipTM=0.215 tol=2.98
2024-12-09 14:44:40,025 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.559 ipTM=0.213 tol=5.39
2024-12-09 14:46:54,363 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.5 pTM=0.559 ipTM=0.208 tol=4.7
2024-12-09 14:49:08,743 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.4 pTM=0.56 ipTM=0.208 tol=2.94
2024-12-09 14:51:23,144 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.6 pTM=0.559 ipTM=0.208 tol=2.98
2024-12-09 14:53:37,514 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.4 pTM=0.557 ipTM=0.208 tol=5.8
2024-12-09 14:55:51,850 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.4 pTM=0.556 ipTM=0.205 tol=2.99
2024-12-09 14:58:06,248 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.2 pTM=0.557 ipTM=0.204 tol=4.23
2024-12-09 15:00:20,653 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.5 pTM=0.557 ipTM=0.206 tol=2.09
2024-12-09 15:02:35,049 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.5 pTM=0.558 ipTM=0.208 tol=1.71
2024-12-09 15:04:49,436 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.4 pTM=0.559 ipTM=0.207 tol=3.87
2024-12-09 15:07:03,798 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.4 pTM=0.558 ipTM=0.207 tol=3.52
2024-12-09 15:09:18,163 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.5 pTM=0.557 ipTM=0.214 tol=4.82
2024-12-09 15:11:32,570 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.4 pTM=0.558 ipTM=0.212 tol=4.18
2024-12-09 15:13:46,934 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.5 pTM=0.559 ipTM=0.211 tol=2.41
2024-12-09 15:16:01,284 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.4 pTM=0.559 ipTM=0.212 tol=4.09
2024-12-09 15:18:15,617 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.6 pTM=0.561 ipTM=0.23 tol=4.19
2024-12-09 15:20:29,935 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.5 pTM=0.563 ipTM=0.266 tol=2.82
2024-12-09 15:22:44,253 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.8 pTM=0.564 ipTM=0.244 tol=5.98
2024-12-09 15:24:58,634 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.8 pTM=0.565 ipTM=0.227 tol=3.78
2024-12-09 15:27:12,991 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.8 pTM=0.563 ipTM=0.227 tol=2.02
2024-12-09 15:29:27,333 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.6 pTM=0.563 ipTM=0.227 tol=2.88
2024-12-09 15:31:41,613 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.8 pTM=0.561 ipTM=0.215 tol=3.07
2024-12-09 15:33:55,870 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.6 pTM=0.563 ipTM=0.217 tol=3.87
2024-12-09 15:36:10,108 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.7 pTM=0.561 ipTM=0.216 tol=2.71
2024-12-09 15:38:24,391 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.8 pTM=0.562 ipTM=0.216 tol=2.85
2024-12-09 15:38:24,393 alphafold2_multimer_v3_model_5_seed_000 took 4164.7s (30 recycles)
2024-12-09 15:38:26,457 reranking models by 'multimer' metric
2024-12-09 15:38:30,752 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 15:42:34,188 Relaxation took 247.7s
2024-12-09 15:42:34,188 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69 pTM=0.561 ipTM=0.284
2024-12-09 15:47:54,027 Relaxation took 319.8s
2024-12-09 15:47:54,027 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.4 pTM=0.56 ipTM=0.245
2024-12-09 15:52:22,387 Relaxation took 268.4s
2024-12-09 15:52:22,388 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.1 pTM=0.576 ipTM=0.226
2024-12-09 15:56:39,351 Relaxation took 257.0s
2024-12-09 15:56:39,351 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.8 pTM=0.562 ipTM=0.216
2024-12-09 16:00:24,890 Relaxation took 225.5s
2024-12-09 16:00:24,890 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.3 pTM=0.562 ipTM=0.213
2024-12-09 16:00:29,637 Done