2024-12-09 09:57:52,763 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 09:57:53,086 Running on GPU
2024-12-09 09:57:57,019 Found 6 citations for tools or databases
2024-12-09 09:57:57,020 Query 1/1: UBOX5_EMILIN1 (length 1557)
2024-12-09 09:57:57,318 Sleeping for 10s. Reason: PENDING
2024-12-09 09:58:07,588 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:58:15,849 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:58:26,105 Sleeping for 6s. Reason: RUNNING
2024-12-09 09:58:32,374 Sleeping for 7s. Reason: RUNNING
2024-12-09 09:58:39,640 Sleeping for 7s. Reason: RUNNING
2024-12-09 09:58:46,897 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:58:57,156 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:59:07,417 Sleeping for 6s. Reason: RUNNING
2024-12-09 09:59:13,678 Sleeping for 10s. Reason: RUNNING
2024-12-09 09:59:23,943 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:59:32,209 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:59:40,472 Sleeping for 8s. Reason: RUNNING
2024-12-09 09:59:48,730 Sleeping for 5s. Reason: RUNNING
2024-12-09 09:59:53,987 Sleeping for 7s. Reason: RUNNING
2024-12-09 10:00:01,237 Sleeping for 7s. Reason: RUNNING
2024-12-09 10:00:09,280 Sleeping for 6s. Reason: PENDING
2024-12-09 10:00:15,533 Sleeping for 6s. Reason: RUNNING
2024-12-09 10:00:21,796 Sleeping for 8s. Reason: RUNNING
2024-12-09 10:00:30,059 Sleeping for 6s. Reason: RUNNING
2024-12-09 10:00:36,326 Sleeping for 7s. Reason: RUNNING
2024-12-09 10:00:43,584 Sleeping for 7s. Reason: RUNNING
2024-12-09 10:00:50,844 Sleeping for 9s. Reason: RUNNING
2024-12-09 10:01:00,102 Sleeping for 7s. Reason: RUNNING
2024-12-09 10:01:07,361 Sleeping for 6s. Reason: RUNNING
2024-12-09 10:01:13,613 Sleeping for 6s. Reason: RUNNING
2024-12-09 10:01:19,881 Sleeping for 8s. Reason: RUNNING
2024-12-09 10:01:28,141 Sleeping for 10s. Reason: RUNNING
2024-12-09 10:01:41,795 Setting max_seq=508, max_extra_seq=2048
2024-12-09 10:05:50,356 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.2 pTM=0.294 ipTM=0.248
2024-12-09 10:07:03,149 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=42 pTM=0.281 ipTM=0.184 tol=15.9
2024-12-09 10:08:16,015 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=41.8 pTM=0.305 ipTM=0.311 tol=10.6
2024-12-09 10:09:28,876 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42 pTM=0.305 ipTM=0.289 tol=5.71
2024-12-09 10:10:41,785 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=41.9 pTM=0.299 ipTM=0.265 tol=3.57
2024-12-09 10:11:54,666 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42 pTM=0.299 ipTM=0.274 tol=3.38
2024-12-09 10:13:07,569 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.9 pTM=0.292 ipTM=0.245 tol=2.46
2024-12-09 10:14:20,467 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.9 pTM=0.284 ipTM=0.254 tol=3.05
2024-12-09 10:15:33,412 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.9 pTM=0.279 ipTM=0.258 tol=2.46
2024-12-09 10:16:46,353 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.9 pTM=0.278 ipTM=0.264 tol=2.75
2024-12-09 10:17:59,308 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.1 pTM=0.276 ipTM=0.26 tol=3.64
2024-12-09 10:19:12,243 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.5 pTM=0.276 ipTM=0.26 tol=7.61
2024-12-09 10:20:25,139 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.8 pTM=0.276 ipTM=0.279 tol=5.05
2024-12-09 10:21:38,050 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.1 pTM=0.276 ipTM=0.277 tol=3.61
2024-12-09 10:22:50,951 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.1 pTM=0.277 ipTM=0.279 tol=2.54
2024-12-09 10:24:03,865 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42 pTM=0.278 ipTM=0.285 tol=3.28
2024-12-09 10:25:16,748 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.9 pTM=0.28 ipTM=0.295 tol=2.97
2024-12-09 10:26:29,661 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.3 pTM=0.278 ipTM=0.291 tol=2.25
2024-12-09 10:27:42,582 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.4 pTM=0.277 ipTM=0.281 tol=2.26
2024-12-09 10:28:55,491 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.3 pTM=0.275 ipTM=0.266 tol=1.83
2024-12-09 10:30:08,401 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.5 pTM=0.276 ipTM=0.267 tol=1.59
2024-12-09 10:31:21,316 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.4 pTM=0.276 ipTM=0.271 tol=1.91
2024-12-09 10:32:34,229 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.3 pTM=0.276 ipTM=0.271 tol=2
2024-12-09 10:33:47,144 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.4 pTM=0.275 ipTM=0.266 tol=1.31
2024-12-09 10:35:00,049 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42 pTM=0.275 ipTM=0.265 tol=1.52
2024-12-09 10:36:12,962 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.6 pTM=0.276 ipTM=0.27 tol=11.5
2024-12-09 10:37:25,844 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.3 pTM=0.279 ipTM=0.272 tol=5.77
2024-12-09 10:38:38,713 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42 pTM=0.28 ipTM=0.279 tol=4.2
2024-12-09 10:39:51,612 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.1 pTM=0.279 ipTM=0.271 tol=3.02
2024-12-09 10:41:04,499 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.2 pTM=0.28 ipTM=0.28 tol=2.68
2024-12-09 10:42:17,410 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.9 pTM=0.279 ipTM=0.275 tol=1.92
2024-12-09 10:42:17,412 alphafold2_multimer_v3_model_1_seed_000 took 2429.5s (30 recycles)
2024-12-09 10:43:31,881 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.9 pTM=0.296 ipTM=0.196
2024-12-09 10:44:44,992 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.1 pTM=0.277 ipTM=0.177 tol=16.4
2024-12-09 10:45:58,126 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.8 pTM=0.277 ipTM=0.179 tol=13.3
2024-12-09 10:47:11,260 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45 pTM=0.274 ipTM=0.187 tol=11.6
2024-12-09 10:48:24,382 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.2 pTM=0.276 ipTM=0.182 tol=6.48
2024-12-09 10:49:37,463 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46 pTM=0.277 ipTM=0.195 tol=7.28
2024-12-09 10:50:50,563 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.7 pTM=0.277 ipTM=0.184 tol=5.97
2024-12-09 10:52:03,637 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.9 pTM=0.277 ipTM=0.189 tol=6.02
2024-12-09 10:53:16,721 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46 pTM=0.278 ipTM=0.188 tol=4.18
2024-12-09 10:54:29,805 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.4 pTM=0.28 ipTM=0.222 tol=4.18
2024-12-09 10:55:42,892 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.3 pTM=0.28 ipTM=0.244 tol=5.32
2024-12-09 10:56:55,969 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.4 pTM=0.281 ipTM=0.255 tol=4.74
2024-12-09 10:58:09,017 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.4 pTM=0.281 ipTM=0.264 tol=3.47
2024-12-09 10:59:22,049 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.1 pTM=0.281 ipTM=0.276 tol=3.72
2024-12-09 11:00:35,071 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.4 pTM=0.282 ipTM=0.282 tol=3.26
2024-12-09 11:01:48,089 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.4 pTM=0.283 ipTM=0.277 tol=5.66
2024-12-09 11:03:01,145 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.1 pTM=0.284 ipTM=0.286 tol=5.86
2024-12-09 11:04:14,191 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.6 pTM=0.284 ipTM=0.291 tol=5.09
2024-12-09 11:05:27,242 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.5 pTM=0.283 ipTM=0.282 tol=4.95
2024-12-09 11:06:40,277 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=45.5 pTM=0.284 ipTM=0.267 tol=5.87
2024-12-09 11:07:53,350 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.8 pTM=0.282 ipTM=0.266 tol=5.23
2024-12-09 11:09:06,375 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.7 pTM=0.283 ipTM=0.275 tol=6.99
2024-12-09 11:10:19,420 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.9 pTM=0.283 ipTM=0.279 tol=3.66
2024-12-09 11:11:32,482 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.7 pTM=0.282 ipTM=0.277 tol=3.86
2024-12-09 11:12:45,539 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46.8 pTM=0.282 ipTM=0.274 tol=2.2
2024-12-09 11:13:58,618 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.8 pTM=0.283 ipTM=0.278 tol=1.66
2024-12-09 11:15:11,675 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.7 pTM=0.283 ipTM=0.269 tol=3.59
2024-12-09 11:16:24,746 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46.7 pTM=0.283 ipTM=0.286 tol=4.25
2024-12-09 11:17:37,813 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=46.9 pTM=0.283 ipTM=0.279 tol=2.54
2024-12-09 11:18:50,870 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.9 pTM=0.283 ipTM=0.279 tol=2.1
2024-12-09 11:20:03,932 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.7 pTM=0.283 ipTM=0.287 tol=2.93
2024-12-09 11:20:03,933 alphafold2_multimer_v3_model_2_seed_000 took 2265.1s (30 recycles)
2024-12-09 11:21:18,829 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.4 pTM=0.274 ipTM=0.201
2024-12-09 11:22:32,573 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.5 pTM=0.27 ipTM=0.171 tol=23.7
2024-12-09 11:23:46,313 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=42.1 pTM=0.271 ipTM=0.177 tol=16.5
2024-12-09 11:25:00,030 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.7 pTM=0.273 ipTM=0.181 tol=12
2024-12-09 11:26:13,760 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.9 pTM=0.273 ipTM=0.18 tol=7.38
2024-12-09 11:27:27,490 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.7 pTM=0.275 ipTM=0.181 tol=8.81
2024-12-09 11:28:41,217 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.7 pTM=0.274 ipTM=0.181 tol=10
2024-12-09 11:29:54,924 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.6 pTM=0.274 ipTM=0.193 tol=5.19
2024-12-09 11:31:08,644 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.6 pTM=0.274 ipTM=0.206 tol=4.05
2024-12-09 11:32:22,323 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.8 pTM=0.276 ipTM=0.229 tol=6.5
2024-12-09 11:33:36,032 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.8 pTM=0.276 ipTM=0.256 tol=5.94
2024-12-09 11:34:49,729 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.7 pTM=0.276 ipTM=0.25 tol=4.83
2024-12-09 11:36:03,430 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.9 pTM=0.278 ipTM=0.268 tol=5.27
2024-12-09 11:37:17,104 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.9 pTM=0.278 ipTM=0.275 tol=3.3
2024-12-09 11:38:30,796 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42 pTM=0.28 ipTM=0.28 tol=7.75
2024-12-09 11:39:44,481 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=42.1 pTM=0.281 ipTM=0.289 tol=5.01
2024-12-09 11:40:58,151 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.1 pTM=0.282 ipTM=0.297 tol=2.85
2024-12-09 11:42:11,808 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.4 pTM=0.281 ipTM=0.295 tol=2.48
2024-12-09 11:43:25,453 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.3 pTM=0.282 ipTM=0.296 tol=2.64
2024-12-09 11:44:39,077 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.4 pTM=0.283 ipTM=0.29 tol=2.85
2024-12-09 11:45:52,710 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.5 pTM=0.282 ipTM=0.286 tol=2.21
2024-12-09 11:47:06,343 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.4 pTM=0.282 ipTM=0.285 tol=2.36
2024-12-09 11:48:19,996 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.6 pTM=0.281 ipTM=0.288 tol=2.09
2024-12-09 11:49:33,650 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.5 pTM=0.281 ipTM=0.289 tol=1.8
2024-12-09 11:50:47,269 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.2 pTM=0.28 ipTM=0.283 tol=5.14
2024-12-09 11:52:00,886 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.4 pTM=0.282 ipTM=0.292 tol=4.96
2024-12-09 11:53:14,513 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.4 pTM=0.281 ipTM=0.286 tol=2.59
2024-12-09 11:54:28,129 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.5 pTM=0.281 ipTM=0.294 tol=3.71
2024-12-09 11:55:41,742 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.7 pTM=0.281 ipTM=0.295 tol=2.49
2024-12-09 11:56:55,326 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.6 pTM=0.282 ipTM=0.298 tol=2.07
2024-12-09 11:58:08,947 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.5 pTM=0.281 ipTM=0.3 tol=1.96
2024-12-09 11:58:08,949 alphafold2_multimer_v3_model_3_seed_000 took 2283.6s (30 recycles)
2024-12-09 11:59:23,726 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.6 pTM=0.279 ipTM=0.198
2024-12-09 12:00:37,253 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.9 pTM=0.276 ipTM=0.171 tol=20.8
2024-12-09 12:01:50,695 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=40.8 pTM=0.303 ipTM=0.317 tol=18.5
2024-12-09 12:03:04,227 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.4 pTM=0.302 ipTM=0.3 tol=12.5
2024-12-09 12:04:17,709 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.8 pTM=0.297 ipTM=0.284 tol=8.86
2024-12-09 12:05:31,116 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=42.4 pTM=0.298 ipTM=0.286 tol=15.7
2024-12-09 12:06:44,527 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=42 pTM=0.287 ipTM=0.241 tol=9.16
2024-12-09 12:07:57,947 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=42.6 pTM=0.291 ipTM=0.261 tol=5.46
2024-12-09 12:09:11,370 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=42 pTM=0.288 ipTM=0.241 tol=5.74
2024-12-09 12:10:24,849 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.8 pTM=0.293 ipTM=0.271 tol=7.79
2024-12-09 12:11:38,290 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=42.1 pTM=0.287 ipTM=0.237 tol=5.63
2024-12-09 12:12:51,675 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=42.2 pTM=0.294 ipTM=0.271 tol=3.95
2024-12-09 12:14:05,059 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.8 pTM=0.298 ipTM=0.284 tol=5.76
2024-12-09 12:15:18,447 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=42.2 pTM=0.295 ipTM=0.273 tol=5.43
2024-12-09 12:16:31,830 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.1 pTM=0.289 ipTM=0.241 tol=6.12
2024-12-09 12:17:45,221 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=42.2 pTM=0.297 ipTM=0.277 tol=3.82
2024-12-09 12:18:58,571 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=42.2 pTM=0.298 ipTM=0.269 tol=3.7
2024-12-09 12:20:11,980 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=41.9 pTM=0.294 ipTM=0.269 tol=9.88
2024-12-09 12:21:25,408 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.9 pTM=0.285 ipTM=0.226 tol=7.59
2024-12-09 12:22:38,785 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=42.1 pTM=0.289 ipTM=0.25 tol=7.76
2024-12-09 12:23:52,088 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.9 pTM=0.291 ipTM=0.241 tol=4.9
2024-12-09 12:25:05,391 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.8 pTM=0.294 ipTM=0.264 tol=4.03
2024-12-09 12:26:18,751 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=42.1 pTM=0.29 ipTM=0.241 tol=4.27
2024-12-09 12:27:32,113 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=42 pTM=0.289 ipTM=0.249 tol=3.47
2024-12-09 12:28:45,391 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.6 pTM=0.29 ipTM=0.243 tol=9.55
2024-12-09 12:29:58,663 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=41.7 pTM=0.289 ipTM=0.242 tol=4.3
2024-12-09 12:31:12,005 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.5 pTM=0.288 ipTM=0.239 tol=6.73
2024-12-09 12:32:25,316 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=42 pTM=0.29 ipTM=0.249 tol=5.89
2024-12-09 12:33:38,611 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=42 pTM=0.288 ipTM=0.229 tol=5.9
2024-12-09 12:34:51,949 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.8 pTM=0.294 ipTM=0.269 tol=5.92
2024-12-09 12:36:05,269 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=42 pTM=0.294 ipTM=0.253 tol=4.97
2024-12-09 12:36:05,271 alphafold2_multimer_v3_model_4_seed_000 took 2274.9s (30 recycles)
2024-12-09 12:37:20,228 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41.5 pTM=0.275 ipTM=0.171
2024-12-09 12:38:33,791 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.2 pTM=0.276 ipTM=0.173 tol=16.2
2024-12-09 12:39:47,365 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=42 pTM=0.273 ipTM=0.167 tol=13.3
2024-12-09 12:41:00,873 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.2 pTM=0.274 ipTM=0.174 tol=7.76
2024-12-09 12:42:14,355 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.7 pTM=0.274 ipTM=0.176 tol=13
2024-12-09 12:43:27,832 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.4 pTM=0.278 ipTM=0.198 tol=13.2
2024-12-09 12:44:41,314 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.9 pTM=0.28 ipTM=0.226 tol=8.9
2024-12-09 12:45:54,806 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.6 pTM=0.281 ipTM=0.244 tol=10.9
2024-12-09 12:47:08,223 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.8 pTM=0.28 ipTM=0.242 tol=8.67
2024-12-09 12:48:21,668 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.8 pTM=0.281 ipTM=0.254 tol=7.48
2024-12-09 12:49:35,074 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.8 pTM=0.281 ipTM=0.258 tol=5.84
2024-12-09 12:50:48,484 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.1 pTM=0.281 ipTM=0.25 tol=6.13
2024-12-09 12:52:01,832 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43 pTM=0.281 ipTM=0.254 tol=6.68
2024-12-09 12:53:15,167 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.9 pTM=0.28 ipTM=0.242 tol=6.07
2024-12-09 12:54:28,573 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.2 pTM=0.28 ipTM=0.249 tol=5.17
2024-12-09 12:55:41,904 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=43.7 pTM=0.281 ipTM=0.26 tol=5.09
2024-12-09 12:56:55,168 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.7 pTM=0.283 ipTM=0.273 tol=5.14
2024-12-09 12:58:08,538 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.3 pTM=0.281 ipTM=0.271 tol=5.86
2024-12-09 12:59:21,853 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=44.4 pTM=0.281 ipTM=0.265 tol=5.93
2024-12-09 13:00:35,094 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.3 pTM=0.282 ipTM=0.263 tol=4.63
2024-12-09 13:01:48,460 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.1 pTM=0.28 ipTM=0.255 tol=7.61
2024-12-09 13:03:01,809 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.7 pTM=0.281 ipTM=0.259 tol=4.36
2024-12-09 13:04:15,036 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.4 pTM=0.282 ipTM=0.26 tol=7.27
2024-12-09 13:05:28,372 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=43.4 pTM=0.28 ipTM=0.259 tol=6.59
2024-12-09 13:06:41,645 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=44.1 pTM=0.281 ipTM=0.255 tol=6.56
2024-12-09 13:07:54,862 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.1 pTM=0.282 ipTM=0.264 tol=4.36
2024-12-09 13:09:08,222 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.2 pTM=0.28 ipTM=0.261 tol=7.12
2024-12-09 13:10:21,543 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=44 pTM=0.281 ipTM=0.268 tol=5.2
2024-12-09 13:11:34,791 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.1 pTM=0.281 ipTM=0.254 tol=2.99
2024-12-09 13:12:48,158 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43 pTM=0.28 ipTM=0.259 tol=3.8
2024-12-09 13:14:01,445 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.7 pTM=0.281 ipTM=0.256 tol=6.67
2024-12-09 13:14:01,447 alphafold2_multimer_v3_model_5_seed_000 took 2274.7s (30 recycles)
2024-12-09 13:14:02,893 reranking models by 'multimer' metric
2024-12-09 13:14:06,753 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 13:18:11,467 Relaxation took 248.6s
2024-12-09 13:18:11,467 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.5 pTM=0.281 ipTM=0.3
2024-12-09 13:20:42,164 Relaxation took 150.7s
2024-12-09 13:20:42,164 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.7 pTM=0.283 ipTM=0.287
2024-12-09 13:24:33,212 Relaxation took 231.0s
2024-12-09 13:24:33,212 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.9 pTM=0.279 ipTM=0.275
2024-12-09 13:28:06,311 Relaxation took 213.1s
2024-12-09 13:28:06,311 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=42 pTM=0.294 ipTM=0.253
2024-12-09 13:31:34,547 Relaxation took 208.2s
2024-12-09 13:31:34,547 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.7 pTM=0.281 ipTM=0.256
2024-12-09 13:31:37,843 Done