2024-12-09 14:08:01,928 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 14:08:03,574 Running on GPU
2024-12-09 14:08:08,447 Found 6 citations for tools or databases
2024-12-09 14:08:08,447 Query 1/1: UBR1_SULF2 (length 2619)
2024-12-09 14:08:08,780 Sleeping for 9s. Reason: PENDING
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2024-12-09 14:10:03,716 Sleeping for 6s. Reason: RUNNING
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2024-12-09 14:11:00,954 Sleeping for 8s. Reason: RUNNING
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2024-12-09 14:11:40,291 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:11:48,552 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:11:56,817 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:12:02,076 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:12:08,337 Sleeping for 10s. Reason: RUNNING
2024-12-09 14:12:18,598 Sleeping for 10s. Reason: RUNNING
2024-12-09 14:12:28,863 Sleeping for 9s. Reason: RUNNING
2024-12-09 14:12:38,130 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:12:44,394 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:12:51,663 Sleeping for 9s. Reason: RUNNING
2024-12-09 14:13:00,928 Sleeping for 10s. Reason: RUNNING
2024-12-09 14:13:13,272 Sleeping for 5s. Reason: PENDING
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2024-12-09 14:13:51,829 Sleeping for 5s. Reason: PENDING
2024-12-09 14:13:57,093 Sleeping for 10s. Reason: PENDING
2024-12-09 14:14:07,353 Sleeping for 10s. Reason: PENDING
2024-12-09 14:14:17,613 Sleeping for 7s. Reason: PENDING
2024-12-09 14:14:24,878 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:14:30,133 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:14:37,398 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:14:45,667 Sleeping for 9s. Reason: RUNNING
2024-12-09 14:14:54,933 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:15:00,187 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:15:06,451 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:15:13,720 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:15:18,977 Sleeping for 9s. Reason: RUNNING
2024-12-09 14:15:28,238 Sleeping for 6s. Reason: RUNNING
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2024-12-09 14:15:40,777 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:15:48,043 Sleeping for 7s. Reason: RUNNING
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2024-12-09 14:16:10,833 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:16:19,096 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:16:26,352 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:16:34,613 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:16:40,873 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:16:47,139 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:16:54,396 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:16:59,653 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:17:05,911 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:17:11,176 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:17:17,431 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:17:24,692 Sleeping for 5s. Reason: RUNNING
2024-12-09 14:17:29,953 Sleeping for 6s. Reason: RUNNING
2024-12-09 14:17:36,238 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:17:44,494 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:17:52,751 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:18:00,008 Sleeping for 8s. Reason: RUNNING
2024-12-09 14:18:08,271 Sleeping for 7s. Reason: RUNNING
2024-12-09 14:18:24,575 Setting max_seq=508, max_extra_seq=2048
2024-12-09 14:27:02,938 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.1 pTM=0.645 ipTM=0.272
2024-12-09 14:30:52,285 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.9 pTM=0.653 ipTM=0.285 tol=7.96
2024-12-09 14:34:41,474 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.2 pTM=0.657 ipTM=0.33 tol=4.47
2024-12-09 14:38:30,569 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.3 pTM=0.655 ipTM=0.3 tol=3.27
2024-12-09 14:42:19,344 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.6 pTM=0.663 ipTM=0.341 tol=3.37
2024-12-09 14:46:08,175 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.8 pTM=0.665 ipTM=0.332 tol=2.31
2024-12-09 14:49:57,024 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.1 pTM=0.665 ipTM=0.38 tol=1.52
2024-12-09 14:53:45,807 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76 pTM=0.668 ipTM=0.335 tol=1.59
2024-12-09 14:57:34,726 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.3 pTM=0.671 ipTM=0.398 tol=1.13
2024-12-09 15:01:23,728 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.5 pTM=0.674 ipTM=0.357 tol=1.16
2024-12-09 15:05:12,695 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.5 pTM=0.674 ipTM=0.358 tol=0.799
2024-12-09 15:09:01,797 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=76.3 pTM=0.671 ipTM=0.362 tol=0.69
2024-12-09 15:12:51,030 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76.4 pTM=0.671 ipTM=0.456 tol=0.887
2024-12-09 15:16:39,997 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.2 pTM=0.668 ipTM=0.349 tol=1.22
2024-12-09 15:20:28,920 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.1 pTM=0.667 ipTM=0.4 tol=1.07
2024-12-09 15:24:17,899 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.4 pTM=0.67 ipTM=0.366 tol=1.09
2024-12-09 15:28:06,858 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.6 pTM=0.676 ipTM=0.422 tol=1.27
2024-12-09 15:31:55,504 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.2 pTM=0.667 ipTM=0.375 tol=1.31
2024-12-09 15:35:44,232 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.2 pTM=0.667 ipTM=0.446 tol=1.03
2024-12-09 15:39:33,103 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.2 pTM=0.668 ipTM=0.357 tol=1.12
2024-12-09 15:43:21,856 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.6 pTM=0.674 ipTM=0.428 tol=1.54
2024-12-09 15:47:10,689 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.2 pTM=0.667 ipTM=0.334 tol=1.31
2024-12-09 15:50:59,639 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.4 pTM=0.672 ipTM=0.447 tol=1.05
2024-12-09 15:54:48,596 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.5 pTM=0.675 ipTM=0.387 tol=0.963
2024-12-09 15:58:37,214 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.2 pTM=0.674 ipTM=0.418 tol=0.642
2024-12-09 16:02:25,858 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.4 pTM=0.678 ipTM=0.357 tol=1.09
2024-12-09 16:06:14,627 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.5 pTM=0.677 ipTM=0.404 tol=0.958
2024-12-09 16:10:03,347 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.2 pTM=0.67 ipTM=0.336 tol=0.798
2024-12-09 16:13:52,161 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76.4 pTM=0.672 ipTM=0.433 tol=1
2024-12-09 16:17:41,145 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.5 pTM=0.674 ipTM=0.361 tol=1.07
2024-12-09 16:21:30,182 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.4 pTM=0.674 ipTM=0.436 tol=0.742
2024-12-09 16:21:30,186 alphafold2_multimer_v3_model_1_seed_000 took 7364.3s (30 recycles)
2024-12-09 16:25:25,466 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=73.6 pTM=0.649 ipTM=0.29
2024-12-09 16:29:15,309 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.2 pTM=0.649 ipTM=0.287 tol=9.07
2024-12-09 16:33:04,801 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.2 pTM=0.685 ipTM=0.421 tol=7.66
2024-12-09 16:36:54,230 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.4 pTM=0.681 ipTM=0.421 tol=3.34
2024-12-09 16:40:43,673 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.6 pTM=0.683 ipTM=0.415 tol=1.93
2024-12-09 16:44:33,272 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.8 pTM=0.687 ipTM=0.433 tol=1.38
2024-12-09 16:48:22,824 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.7 pTM=0.682 ipTM=0.414 tol=1.33
2024-12-09 16:52:12,127 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.9 pTM=0.691 ipTM=0.438 tol=2.18
2024-12-09 16:56:01,422 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.9 pTM=0.691 ipTM=0.445 tol=2.54
2024-12-09 16:59:50,745 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77 pTM=0.694 ipTM=0.459 tol=0.914
2024-12-09 17:03:40,168 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.1 pTM=0.701 ipTM=0.479 tol=1.88
2024-12-09 17:07:29,645 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.1 pTM=0.7 ipTM=0.47 tol=0.729
2024-12-09 17:11:18,778 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77 pTM=0.701 ipTM=0.48 tol=0.46
2024-12-09 17:11:18,782 alphafold2_multimer_v3_model_2_seed_000 took 2983.0s (12 recycles)
2024-12-09 17:15:14,368 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.8 pTM=0.621 ipTM=0.243
2024-12-09 17:19:04,267 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74 pTM=0.631 ipTM=0.33 tol=13.1
2024-12-09 17:22:54,072 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.6 pTM=0.635 ipTM=0.394 tol=5.62
2024-12-09 17:26:43,885 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.8 pTM=0.635 ipTM=0.283 tol=3.34
2024-12-09 17:30:33,772 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.1 pTM=0.641 ipTM=0.426 tol=2.26
2024-12-09 17:34:23,613 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.1 pTM=0.642 ipTM=0.285 tol=1.71
2024-12-09 17:38:13,485 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.2 pTM=0.642 ipTM=0.303 tol=2.36
2024-12-09 17:42:03,115 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.4 pTM=0.649 ipTM=0.382 tol=2.71
2024-12-09 17:45:52,708 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.7 pTM=0.657 ipTM=0.311 tol=1.93
2024-12-09 17:49:42,195 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.8 pTM=0.656 ipTM=0.311 tol=0.981
2024-12-09 17:53:31,582 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.9 pTM=0.663 ipTM=0.338 tol=0.918
2024-12-09 17:57:21,111 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.9 pTM=0.659 ipTM=0.44 tol=1.44
2024-12-09 18:01:10,506 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.8 pTM=0.663 ipTM=0.403 tol=1.32
2024-12-09 18:05:00,031 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.9 pTM=0.662 ipTM=0.414 tol=0.903
2024-12-09 18:08:49,579 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.8 pTM=0.659 ipTM=0.34 tol=1.64
2024-12-09 18:12:38,696 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.9 pTM=0.663 ipTM=0.44 tol=1.02
2024-12-09 18:16:27,682 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.1 pTM=0.664 ipTM=0.33 tol=1.04
2024-12-09 18:20:16,708 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.8 pTM=0.658 ipTM=0.375 tol=0.875
2024-12-09 18:24:05,634 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.8 pTM=0.658 ipTM=0.345 tol=0.881
2024-12-09 18:27:54,531 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.9 pTM=0.667 ipTM=0.436 tol=0.825
2024-12-09 18:31:43,478 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.8 pTM=0.665 ipTM=0.333 tol=0.829
2024-12-09 18:35:32,340 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.1 pTM=0.669 ipTM=0.393 tol=1.08
2024-12-09 18:39:21,226 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76 pTM=0.668 ipTM=0.355 tol=0.692
2024-12-09 18:43:10,155 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.2 pTM=0.674 ipTM=0.452 tol=0.861
2024-12-09 18:46:59,042 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76 pTM=0.671 ipTM=0.352 tol=0.822
2024-12-09 18:50:48,062 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.1 pTM=0.675 ipTM=0.363 tol=0.748
2024-12-09 18:54:37,246 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.1 pTM=0.677 ipTM=0.378 tol=0.629
2024-12-09 18:58:26,439 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.2 pTM=0.679 ipTM=0.379 tol=0.658
2024-12-09 19:02:15,818 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.2 pTM=0.686 ipTM=0.406 tol=1.01
2024-12-09 19:06:05,114 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.4 pTM=0.692 ipTM=0.429 tol=0.816
2024-12-09 19:09:54,230 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.4 pTM=0.691 ipTM=0.429 tol=1.14
2024-12-09 19:09:54,234 alphafold2_multimer_v3_model_3_seed_000 took 7109.8s (30 recycles)
2024-12-09 19:13:49,646 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.8 pTM=0.649 ipTM=0.274
2024-12-09 19:17:39,329 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.9 pTM=0.666 ipTM=0.312 tol=12.4
2024-12-09 19:21:29,139 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.9 pTM=0.662 ipTM=0.294 tol=4.2
2024-12-09 19:25:18,781 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.5 pTM=0.67 ipTM=0.319 tol=3.28
2024-12-09 19:29:08,428 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.8 pTM=0.677 ipTM=0.344 tol=3.21
2024-12-09 19:32:58,026 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.9 pTM=0.68 ipTM=0.35 tol=1.97
2024-12-09 19:36:47,524 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.2 pTM=0.691 ipTM=0.38 tol=2.82
2024-12-09 19:40:37,165 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.4 pTM=0.698 ipTM=0.398 tol=2.65
2024-12-09 19:44:26,665 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.6 pTM=0.709 ipTM=0.431 tol=2.61
2024-12-09 19:48:16,216 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.6 pTM=0.716 ipTM=0.467 tol=3.73
2024-12-09 19:52:05,706 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.7 pTM=0.724 ipTM=0.494 tol=4.51
2024-12-09 19:55:55,251 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.6 pTM=0.725 ipTM=0.505 tol=2.59
2024-12-09 19:59:44,833 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.8 pTM=0.731 ipTM=0.521 tol=2.8
2024-12-09 20:03:34,159 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.7 pTM=0.734 ipTM=0.539 tol=5.96
2024-12-09 20:07:23,420 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.9 pTM=0.742 ipTM=0.557 tol=3.7
2024-12-09 20:11:12,682 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.9 pTM=0.744 ipTM=0.575 tol=1.85
2024-12-09 20:15:02,001 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.1 pTM=0.749 ipTM=0.589 tol=1.2
2024-12-09 20:18:51,300 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.1 pTM=0.75 ipTM=0.606 tol=1.91
2024-12-09 20:22:40,389 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.1 pTM=0.754 ipTM=0.611 tol=2.34
2024-12-09 20:26:29,412 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.2 pTM=0.757 ipTM=0.627 tol=2.17
2024-12-09 20:30:18,467 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.4 pTM=0.765 ipTM=0.656 tol=0.774
2024-12-09 20:34:07,323 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.4 pTM=0.764 ipTM=0.662 tol=0.664
2024-12-09 20:37:56,200 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.4 pTM=0.766 ipTM=0.674 tol=0.612
2024-12-09 20:41:45,128 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.5 pTM=0.767 ipTM=0.683 tol=0.707
2024-12-09 20:45:34,002 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.5 pTM=0.768 ipTM=0.683 tol=1.71
2024-12-09 20:49:22,858 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.4 pTM=0.767 ipTM=0.684 tol=1.06
2024-12-09 20:53:11,766 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.6 pTM=0.768 ipTM=0.687 tol=2.19
2024-12-09 20:57:00,747 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.6 pTM=0.769 ipTM=0.689 tol=1.6
2024-12-09 21:00:49,911 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.6 pTM=0.77 ipTM=0.693 tol=1.73
2024-12-09 21:04:39,198 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.6 pTM=0.769 ipTM=0.694 tol=2.18
2024-12-09 21:08:28,544 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.5 pTM=0.769 ipTM=0.692 tol=2.43
2024-12-09 21:08:28,548 alphafold2_multimer_v3_model_4_seed_000 took 7108.7s (30 recycles)
2024-12-09 21:12:24,109 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.8 pTM=0.622 ipTM=0.254
2024-12-09 21:16:14,063 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74 pTM=0.637 ipTM=0.26 tol=7.53
2024-12-09 21:20:04,093 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.2 pTM=0.641 ipTM=0.269 tol=5.12
2024-12-09 21:23:53,962 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.6 pTM=0.645 ipTM=0.278 tol=5.91
2024-12-09 21:27:43,843 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.9 pTM=0.648 ipTM=0.425 tol=3.9
2024-12-09 21:31:33,260 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.4 pTM=0.66 ipTM=0.35 tol=2.81
2024-12-09 21:35:22,616 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.6 pTM=0.663 ipTM=0.393 tol=2.88
2024-12-09 21:39:11,831 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.9 pTM=0.668 ipTM=0.344 tol=2.26
2024-12-09 21:43:00,922 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.8 pTM=0.675 ipTM=0.433 tol=2.16
2024-12-09 21:46:50,054 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.1 pTM=0.682 ipTM=0.387 tol=1.95
2024-12-09 21:50:39,279 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.2 pTM=0.691 ipTM=0.435 tol=1.57
2024-12-09 21:54:28,310 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.4 pTM=0.706 ipTM=0.488 tol=1.92
2024-12-09 21:58:17,456 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.4 pTM=0.718 ipTM=0.533 tol=2.89
2024-12-09 22:02:06,683 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.6 pTM=0.729 ipTM=0.563 tol=2.17
2024-12-09 22:05:56,090 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.7 pTM=0.737 ipTM=0.591 tol=0.913
2024-12-09 22:09:45,518 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.8 pTM=0.743 ipTM=0.613 tol=1.71
2024-12-09 22:13:34,651 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.9 pTM=0.749 ipTM=0.641 tol=2.16
2024-12-09 22:17:23,809 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.9 pTM=0.75 ipTM=0.647 tol=2.75
2024-12-09 22:21:13,047 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.8 pTM=0.751 ipTM=0.653 tol=2
2024-12-09 22:25:02,168 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.1 pTM=0.757 ipTM=0.669 tol=1.58
2024-12-09 22:28:51,402 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77 pTM=0.761 ipTM=0.68 tol=1.35
2024-12-09 22:32:40,698 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77 pTM=0.76 ipTM=0.676 tol=1.81
2024-12-09 22:36:29,738 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.9 pTM=0.761 ipTM=0.683 tol=3.59
2024-12-09 22:40:18,924 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77.1 pTM=0.764 ipTM=0.688 tol=3.2
2024-12-09 22:44:08,212 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77 pTM=0.763 ipTM=0.682 tol=2.04
2024-12-09 22:47:57,345 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77 pTM=0.761 ipTM=0.686 tol=2.29
2024-12-09 22:51:46,589 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77.1 pTM=0.764 ipTM=0.69 tol=1.83
2024-12-09 22:55:35,840 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77.2 pTM=0.763 ipTM=0.686 tol=1.59
2024-12-09 22:59:25,019 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77.2 pTM=0.765 ipTM=0.69 tol=1.27
2024-12-09 23:03:14,293 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.2 pTM=0.766 ipTM=0.693 tol=1.32
2024-12-09 23:07:03,527 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=77.1 pTM=0.765 ipTM=0.691 tol=1.39
2024-12-09 23:07:03,531 alphafold2_multimer_v3_model_5_seed_000 took 7109.4s (30 recycles)
2024-12-09 23:07:09,147 reranking models by 'multimer' metric
2024-12-09 23:07:15,620 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 23:27:56,667 Relaxation took 1247.5s
2024-12-09 23:27:56,667 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.5 pTM=0.769 ipTM=0.692
2024-12-09 23:49:03,163 Relaxation took 1266.5s
2024-12-09 23:49:03,163 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.1 pTM=0.765 ipTM=0.691
2024-12-10 00:01:54,916 Relaxation took 771.8s
2024-12-10 00:01:54,916 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77 pTM=0.701 ipTM=0.48
2024-12-10 00:19:20,032 Relaxation took 1045.1s
2024-12-10 00:19:20,032 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.4 pTM=0.674 ipTM=0.436
2024-12-10 00:32:10,919 Relaxation took 770.9s
2024-12-10 00:32:10,929 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.4 pTM=0.691 ipTM=0.429
2024-12-10 00:32:21,623 Done