2024-12-09 16:34:20,858 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 16:34:21,174 Running on GPU
2024-12-09 16:34:24,983 Found 6 citations for tools or databases
2024-12-09 16:34:24,983 Query 1/1: UBR3_EGFL7 (length 2161)
2024-12-09 16:34:25,281 Sleeping for 10s. Reason: PENDING
2024-12-09 16:34:35,547 Sleeping for 8s. Reason: RUNNING
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2024-12-09 16:38:27,707 Sleeping for 5s. Reason: RUNNING
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2024-12-09 16:38:39,214 Sleeping for 6s. Reason: RUNNING
2024-12-09 16:38:45,471 Sleeping for 10s. Reason: RUNNING
2024-12-09 16:38:55,732 Sleeping for 9s. Reason: RUNNING
2024-12-09 16:39:04,999 Sleeping for 5s. Reason: RUNNING
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2024-12-09 16:39:45,924 Sleeping for 7s. Reason: PENDING
2024-12-09 16:39:53,178 Sleeping for 7s. Reason: RUNNING
2024-12-09 16:40:00,445 Sleeping for 7s. Reason: RUNNING
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2024-12-09 16:40:51,274 Sleeping for 6s. Reason: RUNNING
2024-12-09 16:40:57,543 Sleeping for 6s. Reason: RUNNING
2024-12-09 16:41:03,800 Sleeping for 8s. Reason: RUNNING
2024-12-09 16:41:12,063 Sleeping for 5s. Reason: RUNNING
2024-12-09 16:41:17,329 Sleeping for 5s. Reason: RUNNING
2024-12-09 16:41:22,591 Sleeping for 7s. Reason: RUNNING
2024-12-09 16:41:29,846 Sleeping for 5s. Reason: RUNNING
2024-12-09 16:41:35,098 Sleeping for 9s. Reason: RUNNING
2024-12-09 16:41:44,353 Sleeping for 7s. Reason: RUNNING
2024-12-09 16:41:51,612 Sleeping for 9s. Reason: RUNNING
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2024-12-09 16:42:06,121 Sleeping for 8s. Reason: RUNNING
2024-12-09 16:42:18,346 Setting max_seq=508, max_extra_seq=2048
2024-12-09 16:48:40,702 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.4 pTM=0.718 ipTM=0.214
2024-12-09 16:51:55,615 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.9 pTM=0.732 ipTM=0.28 tol=14.9
2024-12-09 16:55:10,506 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.8 pTM=0.734 ipTM=0.289 tol=2.26
2024-12-09 16:58:25,393 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.4 pTM=0.736 ipTM=0.293 tol=2.64
2024-12-09 17:01:40,266 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=73.6 pTM=0.735 ipTM=0.284 tol=3.42
2024-12-09 17:04:55,147 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.6 pTM=0.737 ipTM=0.278 tol=4.8
2024-12-09 17:08:10,034 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.8 pTM=0.736 ipTM=0.322 tol=1.51
2024-12-09 17:11:24,948 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.736 ipTM=0.326 tol=1.3
2024-12-09 17:14:39,878 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.8 pTM=0.734 ipTM=0.359 tol=1.08
2024-12-09 17:17:54,785 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.8 pTM=0.738 ipTM=0.301 tol=0.871
2024-12-09 17:21:09,700 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.1 pTM=0.74 ipTM=0.293 tol=0.979
2024-12-09 17:24:24,624 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.9 pTM=0.734 ipTM=0.307 tol=1.16
2024-12-09 17:27:39,546 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.1 pTM=0.739 ipTM=0.31 tol=0.762
2024-12-09 17:30:54,432 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.8 pTM=0.735 ipTM=0.315 tol=0.93
2024-12-09 17:34:09,316 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.9 pTM=0.736 ipTM=0.297 tol=0.607
2024-12-09 17:37:24,211 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.1 pTM=0.739 ipTM=0.316 tol=1.09
2024-12-09 17:40:39,084 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74 pTM=0.739 ipTM=0.346 tol=1.09
2024-12-09 17:43:53,916 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.9 pTM=0.736 ipTM=0.316 tol=0.825
2024-12-09 17:47:08,771 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.1 pTM=0.737 ipTM=0.315 tol=1.22
2024-12-09 17:50:23,634 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.9 pTM=0.737 ipTM=0.298 tol=1.35
2024-12-09 17:53:38,481 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.9 pTM=0.738 ipTM=0.298 tol=0.844
2024-12-09 17:56:53,324 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.1 pTM=0.74 ipTM=0.312 tol=0.822
2024-12-09 18:00:08,192 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74 pTM=0.737 ipTM=0.342 tol=1.24
2024-12-09 18:03:23,077 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74 pTM=0.738 ipTM=0.309 tol=1.06
2024-12-09 18:06:37,941 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.9 pTM=0.737 ipTM=0.286 tol=0.865
2024-12-09 18:09:52,781 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.8 pTM=0.736 ipTM=0.333 tol=1.18
2024-12-09 18:13:07,646 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74 pTM=0.737 ipTM=0.327 tol=0.832
2024-12-09 18:16:22,481 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.8 pTM=0.736 ipTM=0.293 tol=0.72
2024-12-09 18:19:37,320 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.9 pTM=0.739 ipTM=0.321 tol=0.704
2024-12-09 18:22:52,168 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74 pTM=0.739 ipTM=0.292 tol=0.766
2024-12-09 18:26:07,055 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.1 pTM=0.742 ipTM=0.312 tol=0.777
2024-12-09 18:26:07,058 alphafold2_multimer_v3_model_1_seed_000 took 6223.4s (30 recycles)
2024-12-09 18:29:24,932 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.7 pTM=0.723 ipTM=0.29
2024-12-09 18:32:40,079 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.2 pTM=0.731 ipTM=0.438 tol=5.87
2024-12-09 18:35:55,186 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.7 pTM=0.731 ipTM=0.337 tol=2.67
2024-12-09 18:39:10,349 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.1 pTM=0.737 ipTM=0.29 tol=3.97
2024-12-09 18:42:25,459 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.4 pTM=0.737 ipTM=0.289 tol=2.4
2024-12-09 18:45:40,550 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.5 pTM=0.739 ipTM=0.296 tol=1.3
2024-12-09 18:48:55,647 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.6 pTM=0.741 ipTM=0.292 tol=0.912
2024-12-09 18:52:10,770 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.6 pTM=0.74 ipTM=0.283 tol=1.6
2024-12-09 18:55:25,896 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.9 pTM=0.741 ipTM=0.288 tol=1.24
2024-12-09 18:58:41,010 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.7 pTM=0.742 ipTM=0.286 tol=1.03
2024-12-09 19:01:56,124 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.9 pTM=0.743 ipTM=0.289 tol=0.993
2024-12-09 19:05:11,211 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.8 pTM=0.741 ipTM=0.286 tol=0.941
2024-12-09 19:08:26,309 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.1 pTM=0.745 ipTM=0.291 tol=0.815
2024-12-09 19:11:41,391 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.8 pTM=0.743 ipTM=0.294 tol=1.15
2024-12-09 19:14:56,480 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.9 pTM=0.744 ipTM=0.292 tol=0.808
2024-12-09 19:18:11,576 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.9 pTM=0.743 ipTM=0.288 tol=0.795
2024-12-09 19:21:26,655 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.9 pTM=0.743 ipTM=0.286 tol=1.16
2024-12-09 19:24:41,726 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.8 pTM=0.743 ipTM=0.289 tol=0.92
2024-12-09 19:27:56,805 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.9 pTM=0.743 ipTM=0.29 tol=0.608
2024-12-09 19:31:11,895 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.9 pTM=0.745 ipTM=0.291 tol=0.616
2024-12-09 19:34:26,959 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.9 pTM=0.744 ipTM=0.293 tol=0.75
2024-12-09 19:37:42,063 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.8 pTM=0.746 ipTM=0.288 tol=0.828
2024-12-09 19:40:57,154 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.8 pTM=0.746 ipTM=0.292 tol=0.613
2024-12-09 19:44:12,246 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.8 pTM=0.746 ipTM=0.297 tol=0.656
2024-12-09 19:47:27,292 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.8 pTM=0.743 ipTM=0.293 tol=0.791
2024-12-09 19:50:42,382 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.6 pTM=0.743 ipTM=0.288 tol=0.536
2024-12-09 19:53:57,485 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.8 pTM=0.743 ipTM=0.289 tol=0.621
2024-12-09 19:57:12,574 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.6 pTM=0.744 ipTM=0.287 tol=0.999
2024-12-09 20:00:27,619 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.8 pTM=0.742 ipTM=0.29 tol=0.691
2024-12-09 20:03:42,671 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.7 pTM=0.744 ipTM=0.291 tol=0.656
2024-12-09 20:06:57,740 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.8 pTM=0.745 ipTM=0.294 tol=0.665
2024-12-09 20:06:57,742 alphafold2_multimer_v3_model_2_seed_000 took 6048.0s (30 recycles)
2024-12-09 20:10:15,576 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.1 pTM=0.722 ipTM=0.272
2024-12-09 20:13:30,645 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.4 pTM=0.721 ipTM=0.292 tol=2.91
2024-12-09 20:16:45,739 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.8 pTM=0.726 ipTM=0.28 tol=3.87
2024-12-09 20:20:00,797 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.1 pTM=0.728 ipTM=0.275 tol=5.93
2024-12-09 20:23:15,880 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.3 pTM=0.73 ipTM=0.284 tol=2.38
2024-12-09 20:26:30,956 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.3 pTM=0.732 ipTM=0.286 tol=2.41
2024-12-09 20:29:45,977 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.3 pTM=0.73 ipTM=0.283 tol=1.59
2024-12-09 20:33:00,978 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.6 pTM=0.732 ipTM=0.291 tol=2.37
2024-12-09 20:36:16,049 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.9 pTM=0.736 ipTM=0.307 tol=1.88
2024-12-09 20:39:31,089 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.6 pTM=0.745 ipTM=0.591 tol=4.86
2024-12-09 20:42:46,176 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.9 pTM=0.747 ipTM=0.59 tol=2.71
2024-12-09 20:46:01,226 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.8 pTM=0.746 ipTM=0.578 tol=2.17
2024-12-09 20:49:16,227 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.1 pTM=0.752 ipTM=0.593 tol=3.43
2024-12-09 20:52:31,215 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.6 pTM=0.745 ipTM=0.583 tol=1.34
2024-12-09 20:55:46,211 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.9 pTM=0.75 ipTM=0.595 tol=0.93
2024-12-09 20:59:01,230 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.8 pTM=0.75 ipTM=0.603 tol=1.4
2024-12-09 21:02:16,234 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.1 pTM=0.751 ipTM=0.601 tol=1.49
2024-12-09 21:05:31,240 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.1 pTM=0.752 ipTM=0.611 tol=1.37
2024-12-09 21:08:46,276 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.1 pTM=0.751 ipTM=0.603 tol=0.995
2024-12-09 21:12:01,322 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75 pTM=0.75 ipTM=0.606 tol=1.1
2024-12-09 21:15:16,322 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.1 pTM=0.752 ipTM=0.604 tol=2.1
2024-12-09 21:18:31,363 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.9 pTM=0.75 ipTM=0.61 tol=1.41
2024-12-09 21:21:46,437 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.2 pTM=0.753 ipTM=0.614 tol=2.33
2024-12-09 21:25:01,477 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.2 pTM=0.754 ipTM=0.619 tol=2.88
2024-12-09 21:28:16,449 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.9 pTM=0.75 ipTM=0.614 tol=1.02
2024-12-09 21:31:31,427 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.1 pTM=0.751 ipTM=0.625 tol=2.45
2024-12-09 21:34:46,395 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=75.2 pTM=0.753 ipTM=0.635 tol=1.58
2024-12-09 21:38:01,384 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75 pTM=0.752 ipTM=0.629 tol=0.68
2024-12-09 21:41:16,396 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.1 pTM=0.753 ipTM=0.627 tol=1.57
2024-12-09 21:44:31,443 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.1 pTM=0.752 ipTM=0.623 tol=0.755
2024-12-09 21:47:46,513 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=75.2 pTM=0.755 ipTM=0.629 tol=0.749
2024-12-09 21:47:46,515 alphafold2_multimer_v3_model_3_seed_000 took 6046.1s (30 recycles)
2024-12-09 21:51:04,413 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.1 pTM=0.74 ipTM=0.266
2024-12-09 21:54:19,459 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72 pTM=0.743 ipTM=0.274 tol=10.6
2024-12-09 21:57:34,457 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.4 pTM=0.748 ipTM=0.296 tol=3.91
2024-12-09 22:00:49,478 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.7 pTM=0.751 ipTM=0.308 tol=2.08
2024-12-09 22:04:04,465 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.6 pTM=0.748 ipTM=0.297 tol=3.25
2024-12-09 22:07:19,485 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.8 pTM=0.751 ipTM=0.304 tol=1.5
2024-12-09 22:10:34,460 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.6 pTM=0.748 ipTM=0.303 tol=2.24
2024-12-09 22:13:49,470 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.8 pTM=0.75 ipTM=0.302 tol=2.37
2024-12-09 22:17:04,485 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.8 pTM=0.749 ipTM=0.295 tol=1.69
2024-12-09 22:20:19,488 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.8 pTM=0.749 ipTM=0.312 tol=1.89
2024-12-09 22:23:34,511 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.7 pTM=0.748 ipTM=0.292 tol=2.9
2024-12-09 22:26:49,482 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.7 pTM=0.745 ipTM=0.289 tol=1.7
2024-12-09 22:30:04,517 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.7 pTM=0.746 ipTM=0.289 tol=2.56
2024-12-09 22:33:19,542 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.8 pTM=0.747 ipTM=0.287 tol=3.37
2024-12-09 22:36:34,549 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.8 pTM=0.746 ipTM=0.285 tol=1.52
2024-12-09 22:39:49,556 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.9 pTM=0.746 ipTM=0.285 tol=2.25
2024-12-09 22:43:04,583 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.8 pTM=0.745 ipTM=0.28 tol=3.1
2024-12-09 22:46:19,578 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.8 pTM=0.747 ipTM=0.291 tol=1.89
2024-12-09 22:49:34,589 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.8 pTM=0.745 ipTM=0.292 tol=2.33
2024-12-09 22:52:49,579 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.8 pTM=0.747 ipTM=0.293 tol=2.8
2024-12-09 22:56:04,559 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.8 pTM=0.748 ipTM=0.301 tol=1.7
2024-12-09 22:59:19,642 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73 pTM=0.749 ipTM=0.299 tol=2.54
2024-12-09 23:02:34,673 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.9 pTM=0.748 ipTM=0.298 tol=3.17
2024-12-09 23:05:49,679 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.3 pTM=0.754 ipTM=0.416 tol=3.06
2024-12-09 23:09:04,707 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.7 pTM=0.756 ipTM=0.492 tol=4.89
2024-12-09 23:12:19,727 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.9 pTM=0.757 ipTM=0.518 tol=4.43
2024-12-09 23:15:34,721 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=74 pTM=0.758 ipTM=0.515 tol=1.98
2024-12-09 23:18:49,734 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=74.1 pTM=0.761 ipTM=0.526 tol=2.14
2024-12-09 23:22:04,736 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.1 pTM=0.76 ipTM=0.526 tol=1.48
2024-12-09 23:25:19,763 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.3 pTM=0.762 ipTM=0.534 tol=1.43
2024-12-09 23:28:34,791 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.1 pTM=0.76 ipTM=0.525 tol=1.43
2024-12-09 23:28:34,794 alphafold2_multimer_v3_model_4_seed_000 took 6045.5s (30 recycles)
2024-12-09 23:31:52,616 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71 pTM=0.723 ipTM=0.289
2024-12-09 23:35:07,730 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.9 pTM=0.724 ipTM=0.299 tol=5.15
2024-12-09 23:38:22,865 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.5 pTM=0.729 ipTM=0.335 tol=2.61
2024-12-09 23:41:37,963 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.9 pTM=0.733 ipTM=0.328 tol=1.75
2024-12-09 23:44:53,056 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.8 pTM=0.732 ipTM=0.292 tol=1.9
2024-12-09 23:48:08,196 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.9 pTM=0.735 ipTM=0.283 tol=2.8
2024-12-09 23:51:23,291 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.9 pTM=0.735 ipTM=0.286 tol=2.01
2024-12-09 23:54:38,430 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.2 pTM=0.738 ipTM=0.282 tol=1.46
2024-12-09 23:57:53,552 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.3 pTM=0.739 ipTM=0.281 tol=1.48
2024-12-10 00:01:08,705 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.3 pTM=0.74 ipTM=0.28 tol=1.11
2024-12-10 00:04:23,818 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.8 pTM=0.746 ipTM=0.509 tol=2.45
2024-12-10 00:07:38,948 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.3 pTM=0.752 ipTM=0.56 tol=4.04
2024-12-10 00:10:54,075 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.4 pTM=0.753 ipTM=0.567 tol=1.25
2024-12-10 00:14:09,153 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.2 pTM=0.752 ipTM=0.573 tol=2.87
2024-12-10 00:17:24,207 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.1 pTM=0.753 ipTM=0.578 tol=1.5
2024-12-10 00:20:39,348 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.2 pTM=0.752 ipTM=0.58 tol=1.78
2024-12-10 00:23:54,482 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.4 pTM=0.755 ipTM=0.593 tol=0.896
2024-12-10 00:27:09,629 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.4 pTM=0.757 ipTM=0.591 tol=0.828
2024-12-10 00:30:24,717 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.4 pTM=0.755 ipTM=0.585 tol=1.2
2024-12-10 00:33:39,818 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.1 pTM=0.752 ipTM=0.585 tol=1.05
2024-12-10 00:36:54,956 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.3 pTM=0.756 ipTM=0.588 tol=1.05
2024-12-10 00:40:10,087 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.4 pTM=0.757 ipTM=0.597 tol=0.735
2024-12-10 00:43:25,200 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.4 pTM=0.756 ipTM=0.598 tol=0.932
2024-12-10 00:46:40,304 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.4 pTM=0.757 ipTM=0.595 tol=0.999
2024-12-10 00:49:55,406 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.3 pTM=0.755 ipTM=0.595 tol=1.04
2024-12-10 00:53:10,487 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.2 pTM=0.754 ipTM=0.588 tol=0.865
2024-12-10 00:56:25,546 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.2 pTM=0.753 ipTM=0.587 tol=0.786
2024-12-10 00:59:40,611 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.2 pTM=0.752 ipTM=0.583 tol=1.23
2024-12-10 01:02:55,674 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.2 pTM=0.752 ipTM=0.588 tol=1.59
2024-12-10 01:06:10,755 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.2 pTM=0.755 ipTM=0.594 tol=1.27
2024-12-10 01:09:25,832 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.3 pTM=0.754 ipTM=0.582 tol=1.33
2024-12-10 01:09:25,835 alphafold2_multimer_v3_model_5_seed_000 took 6048.4s (30 recycles)
2024-12-10 01:09:28,495 reranking models by 'multimer' metric
2024-12-10 01:09:33,003 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 01:13:55,832 Relaxation took 267.3s
2024-12-10 01:13:55,832 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.2 pTM=0.755 ipTM=0.629
2024-12-10 01:20:59,527 Relaxation took 423.7s
2024-12-10 01:20:59,527 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.3 pTM=0.754 ipTM=0.582
2024-12-10 01:27:07,371 Relaxation took 367.8s
2024-12-10 01:27:07,371 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.1 pTM=0.76 ipTM=0.525
2024-12-10 01:34:29,343 Relaxation took 442.0s
2024-12-10 01:34:29,346 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.1 pTM=0.742 ipTM=0.312
2024-12-10 01:42:35,976 Relaxation took 486.6s
2024-12-10 01:42:35,977 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.8 pTM=0.745 ipTM=0.294
2024-12-10 01:42:42,044 Done