2024-12-09 17:37:05,722 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 17:37:06,040 Running on GPU
2024-12-09 17:37:10,670 Found 6 citations for tools or databases
2024-12-09 17:37:10,670 Query 1/1: UBR7_CELA3B (length 695)
2024-12-09 17:37:10,985 Sleeping for 6s. Reason: PENDING
2024-12-09 17:37:17,245 Sleeping for 5s. Reason: PENDING
2024-12-09 17:37:22,499 Sleeping for 8s. Reason: PENDING
2024-12-09 17:37:30,759 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:37:36,018 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:37:46,272 Sleeping for 9s. Reason: RUNNING
2024-12-09 17:37:55,530 Sleeping for 7s. Reason: RUNNING
2024-12-09 17:38:02,793 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:38:13,056 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:38:18,311 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:38:28,566 Sleeping for 7s. Reason: RUNNING
2024-12-09 17:38:35,834 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:38:41,086 Sleeping for 9s. Reason: RUNNING
2024-12-09 17:38:50,345 Sleeping for 6s. Reason: RUNNING
2024-12-09 17:38:56,607 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:39:01,870 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:39:12,122 Sleeping for 6s. Reason: RUNNING
2024-12-09 17:39:18,381 Sleeping for 6s. Reason: RUNNING
2024-12-09 17:39:24,640 Sleeping for 7s. Reason: RUNNING
2024-12-09 17:39:31,905 Sleeping for 9s. Reason: RUNNING
2024-12-09 17:39:41,156 Sleeping for 6s. Reason: RUNNING
2024-12-09 17:39:47,411 Sleeping for 8s. Reason: RUNNING
2024-12-09 17:39:55,671 Sleeping for 7s. Reason: RUNNING
2024-12-09 17:40:04,750 Sleeping for 6s. Reason: PENDING
2024-12-09 17:40:11,008 Sleeping for 10s. Reason: PENDING
2024-12-09 17:40:21,265 Sleeping for 9s. Reason: PENDING
2024-12-09 17:40:30,524 Sleeping for 5s. Reason: PENDING
2024-12-09 17:40:35,776 Sleeping for 8s. Reason: PENDING
2024-12-09 17:40:44,038 Sleeping for 8s. Reason: PENDING
2024-12-09 17:40:52,296 Sleeping for 7s. Reason: PENDING
2024-12-09 17:40:59,557 Sleeping for 6s. Reason: PENDING
2024-12-09 17:41:05,816 Sleeping for 9s. Reason: PENDING
2024-12-09 17:41:15,083 Sleeping for 8s. Reason: PENDING
2024-12-09 17:41:23,347 Sleeping for 9s. Reason: PENDING
2024-12-09 17:41:32,611 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:41:37,866 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:41:48,134 Sleeping for 6s. Reason: RUNNING
2024-12-09 17:41:54,385 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:41:59,647 Sleeping for 9s. Reason: RUNNING
2024-12-09 17:42:08,907 Sleeping for 9s. Reason: RUNNING
2024-12-09 17:42:18,165 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:42:28,426 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:42:33,681 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:42:38,942 Sleeping for 6s. Reason: RUNNING
2024-12-09 17:42:45,197 Sleeping for 5s. Reason: RUNNING
2024-12-09 17:42:50,459 Sleeping for 7s. Reason: RUNNING
2024-12-09 17:42:57,714 Sleeping for 10s. Reason: RUNNING
2024-12-09 17:43:10,921 Setting max_seq=508, max_extra_seq=2048
2024-12-09 17:45:56,946 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.4 pTM=0.425 ipTM=0.15
2024-12-09 17:46:06,537 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.7 pTM=0.432 ipTM=0.204 tol=10.9
2024-12-09 17:46:16,134 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.9 pTM=0.432 ipTM=0.273 tol=10.6
2024-12-09 17:46:25,745 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.9 pTM=0.433 ipTM=0.272 tol=4.98
2024-12-09 17:46:35,363 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.3 pTM=0.432 ipTM=0.279 tol=4.28
2024-12-09 17:46:44,980 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.4 pTM=0.434 ipTM=0.303 tol=3.69
2024-12-09 17:46:54,601 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.5 pTM=0.432 ipTM=0.284 tol=4.24
2024-12-09 17:47:04,254 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.6 pTM=0.435 ipTM=0.248 tol=3.28
2024-12-09 17:47:13,903 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.8 pTM=0.432 ipTM=0.266 tol=5.61
2024-12-09 17:47:23,559 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.2 pTM=0.434 ipTM=0.337 tol=3.74
2024-12-09 17:47:33,223 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.8 pTM=0.433 ipTM=0.278 tol=2.42
2024-12-09 17:47:42,899 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.1 pTM=0.436 ipTM=0.248 tol=1.83
2024-12-09 17:47:52,575 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.5 pTM=0.435 ipTM=0.286 tol=3.08
2024-12-09 17:48:02,253 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67 pTM=0.435 ipTM=0.285 tol=2.6
2024-12-09 17:48:11,929 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.4 pTM=0.433 ipTM=0.247 tol=1.73
2024-12-09 17:48:21,608 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67 pTM=0.436 ipTM=0.265 tol=2.17
2024-12-09 17:48:31,282 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.5 pTM=0.435 ipTM=0.26 tol=1.54
2024-12-09 17:48:40,969 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.9 pTM=0.433 ipTM=0.247 tol=2.37
2024-12-09 17:48:50,641 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.4 pTM=0.435 ipTM=0.208 tol=3.52
2024-12-09 17:49:00,329 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.5 pTM=0.435 ipTM=0.241 tol=2.18
2024-12-09 17:49:10,006 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.1 pTM=0.435 ipTM=0.219 tol=2.3
2024-12-09 17:49:19,685 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.434 ipTM=0.157 tol=2.03
2024-12-09 17:49:29,368 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.1 pTM=0.434 ipTM=0.161 tol=4.5
2024-12-09 17:49:39,053 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.7 pTM=0.436 ipTM=0.161 tol=3.44
2024-12-09 17:49:48,729 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.4 pTM=0.434 ipTM=0.161 tol=2.88
2024-12-09 17:49:58,408 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.5 pTM=0.438 ipTM=0.208 tol=3.8
2024-12-09 17:50:08,086 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67 pTM=0.435 ipTM=0.166 tol=4.13
2024-12-09 17:50:17,780 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.6 pTM=0.435 ipTM=0.161 tol=3.51
2024-12-09 17:50:27,449 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.8 pTM=0.435 ipTM=0.164 tol=4.86
2024-12-09 17:50:37,137 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.5 pTM=0.435 ipTM=0.203 tol=3.43
2024-12-09 17:50:46,806 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.5 pTM=0.435 ipTM=0.163 tol=3.95
2024-12-09 17:50:46,807 alphafold2_multimer_v3_model_1_seed_000 took 450.6s (30 recycles)
2024-12-09 17:50:56,792 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.4 pTM=0.431 ipTM=0.169
2024-12-09 17:51:06,500 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.6 pTM=0.43 ipTM=0.154 tol=8.58
2024-12-09 17:51:16,202 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.7 pTM=0.429 ipTM=0.145 tol=5.45
2024-12-09 17:51:25,901 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.8 pTM=0.429 ipTM=0.199 tol=5.11
2024-12-09 17:51:35,588 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.9 pTM=0.432 ipTM=0.148 tol=2.63
2024-12-09 17:51:45,285 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.9 pTM=0.432 ipTM=0.197 tol=5.56
2024-12-09 17:51:54,988 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.1 pTM=0.436 ipTM=0.532 tol=3.42
2024-12-09 17:52:04,674 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.6 pTM=0.441 ipTM=0.625 tol=2.13
2024-12-09 17:52:14,366 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70 pTM=0.448 ipTM=0.631 tol=2.04
2024-12-09 17:52:24,050 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.9 pTM=0.446 ipTM=0.633 tol=1.18
2024-12-09 17:52:33,730 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.2 pTM=0.453 ipTM=0.618 tol=3.24
2024-12-09 17:52:43,387 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.9 pTM=0.45 ipTM=0.619 tol=3.12
2024-12-09 17:52:53,058 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.2 pTM=0.454 ipTM=0.607 tol=1.64
2024-12-09 17:53:02,715 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.9 pTM=0.452 ipTM=0.607 tol=3.61
2024-12-09 17:53:12,390 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.1 pTM=0.452 ipTM=0.596 tol=2.11
2024-12-09 17:53:22,053 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.9 pTM=0.451 ipTM=0.613 tol=2.75
2024-12-09 17:53:31,711 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.2 pTM=0.454 ipTM=0.601 tol=1.77
2024-12-09 17:53:41,357 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.2 pTM=0.451 ipTM=0.609 tol=2.04
2024-12-09 17:53:51,028 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.2 pTM=0.454 ipTM=0.591 tol=1.49
2024-12-09 17:54:00,676 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.9 pTM=0.45 ipTM=0.597 tol=1.56
2024-12-09 17:54:10,344 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.1 pTM=0.451 ipTM=0.59 tol=1.03
2024-12-09 17:54:19,989 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.8 pTM=0.45 ipTM=0.604 tol=1.03
2024-12-09 17:54:29,649 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.1 pTM=0.453 ipTM=0.601 tol=1.15
2024-12-09 17:54:39,307 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.2 pTM=0.454 ipTM=0.609 tol=1.1
2024-12-09 17:54:48,961 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.2 pTM=0.453 ipTM=0.59 tol=0.817
2024-12-09 17:54:58,618 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.2 pTM=0.453 ipTM=0.601 tol=1.45
2024-12-09 17:55:08,280 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.3 pTM=0.455 ipTM=0.603 tol=2.76
2024-12-09 17:55:17,929 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.1 pTM=0.453 ipTM=0.6 tol=2.79
2024-12-09 17:55:27,587 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70 pTM=0.451 ipTM=0.595 tol=2.1
2024-12-09 17:55:37,244 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.9 pTM=0.452 ipTM=0.608 tol=2.13
2024-12-09 17:55:46,901 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.7 pTM=0.449 ipTM=0.598 tol=1.85
2024-12-09 17:55:46,902 alphafold2_multimer_v3_model_2_seed_000 took 299.8s (30 recycles)
2024-12-09 17:55:56,929 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.6 pTM=0.434 ipTM=0.158
2024-12-09 17:56:06,633 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.7 pTM=0.43 ipTM=0.226 tol=15.3
2024-12-09 17:56:16,342 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66 pTM=0.433 ipTM=0.209 tol=11.9
2024-12-09 17:56:26,054 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.1 pTM=0.428 ipTM=0.33 tol=7.64
2024-12-09 17:56:35,771 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.1 pTM=0.43 ipTM=0.281 tol=7.28
2024-12-09 17:56:45,485 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.2 pTM=0.428 ipTM=0.218 tol=3.9
2024-12-09 17:56:55,187 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.3 pTM=0.427 ipTM=0.244 tol=5.34
2024-12-09 17:57:04,896 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.9 pTM=0.425 ipTM=0.144 tol=6.57
2024-12-09 17:57:14,597 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.1 pTM=0.427 ipTM=0.266 tol=4.54
2024-12-09 17:57:24,298 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.1 pTM=0.427 ipTM=0.266 tol=1.92
2024-12-09 17:57:34,004 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.6 pTM=0.429 ipTM=0.173 tol=7.05
2024-12-09 17:57:43,707 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.1 pTM=0.427 ipTM=0.283 tol=6.46
2024-12-09 17:57:53,401 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.8 pTM=0.428 ipTM=0.303 tol=6.86
2024-12-09 17:58:03,094 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.5 pTM=0.43 ipTM=0.279 tol=9.33
2024-12-09 17:58:12,785 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.9 pTM=0.428 ipTM=0.373 tol=4.68
2024-12-09 17:58:22,484 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.7 pTM=0.426 ipTM=0.376 tol=3.39
2024-12-09 17:58:32,175 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.8 pTM=0.426 ipTM=0.345 tol=2.27
2024-12-09 17:58:41,870 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.7 pTM=0.427 ipTM=0.343 tol=1.98
2024-12-09 17:58:51,572 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.6 pTM=0.423 ipTM=0.291 tol=5.96
2024-12-09 17:59:01,264 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.2 pTM=0.425 ipTM=0.309 tol=5.02
2024-12-09 17:59:10,959 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.4 pTM=0.425 ipTM=0.307 tol=4.84
2024-12-09 17:59:20,663 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.4 pTM=0.424 ipTM=0.263 tol=4.85
2024-12-09 17:59:30,357 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.3 pTM=0.422 ipTM=0.149 tol=5.42
2024-12-09 17:59:40,063 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.6 pTM=0.423 ipTM=0.145 tol=6.71
2024-12-09 17:59:49,768 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.5 pTM=0.426 ipTM=0.408 tol=9.31
2024-12-09 17:59:59,477 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.8 pTM=0.425 ipTM=0.225 tol=8.42
2024-12-09 18:00:09,171 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.3 pTM=0.42 ipTM=0.195 tol=7.54
2024-12-09 18:00:18,871 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.5 pTM=0.424 ipTM=0.189 tol=6.54
2024-12-09 18:00:28,562 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.9 pTM=0.422 ipTM=0.145 tol=9.93
2024-12-09 18:00:38,275 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.7 pTM=0.428 ipTM=0.243 tol=6.82
2024-12-09 18:00:47,975 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.2 pTM=0.421 ipTM=0.145 tol=7.48
2024-12-09 18:00:47,975 alphafold2_multimer_v3_model_3_seed_000 took 300.8s (30 recycles)
2024-12-09 18:00:57,988 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.8 pTM=0.45 ipTM=0.211
2024-12-09 18:01:07,702 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.8 pTM=0.441 ipTM=0.551 tol=9.26
2024-12-09 18:01:17,425 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.7 pTM=0.439 ipTM=0.335 tol=4.64
2024-12-09 18:01:27,144 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.2 pTM=0.443 ipTM=0.169 tol=5.67
2024-12-09 18:01:36,876 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.2 pTM=0.438 ipTM=0.502 tol=6.18
2024-12-09 18:01:46,595 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.6 pTM=0.437 ipTM=0.289 tol=2.82
2024-12-09 18:01:56,311 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.3 pTM=0.441 ipTM=0.224 tol=2.84
2024-12-09 18:02:06,036 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.4 pTM=0.439 ipTM=0.408 tol=2.7
2024-12-09 18:02:15,749 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.6 pTM=0.444 ipTM=0.55 tol=3.85
2024-12-09 18:02:25,464 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.7 pTM=0.436 ipTM=0.348 tol=3.9
2024-12-09 18:02:35,185 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.6 pTM=0.45 ipTM=0.626 tol=3.97
2024-12-09 18:02:44,908 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.9 pTM=0.437 ipTM=0.362 tol=3.43
2024-12-09 18:02:54,623 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.9 pTM=0.448 ipTM=0.632 tol=2.92
2024-12-09 18:03:04,333 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.1 pTM=0.435 ipTM=0.343 tol=2.98
2024-12-09 18:03:14,042 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.4 pTM=0.442 ipTM=0.287 tol=2.24
2024-12-09 18:03:23,767 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.3 pTM=0.437 ipTM=0.236 tol=2.21
2024-12-09 18:03:33,479 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.5 pTM=0.442 ipTM=0.285 tol=1.48
2024-12-09 18:03:43,204 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.4 pTM=0.439 ipTM=0.266 tol=2.36
2024-12-09 18:03:52,917 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.7 pTM=0.444 ipTM=0.471 tol=2.55
2024-12-09 18:04:02,627 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.6 pTM=0.435 ipTM=0.429 tol=3.5
2024-12-09 18:04:12,339 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.5 pTM=0.441 ipTM=0.463 tol=2.71
2024-12-09 18:04:22,052 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.4 pTM=0.436 ipTM=0.457 tol=3.79
2024-12-09 18:04:31,744 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.6 pTM=0.444 ipTM=0.444 tol=3.41
2024-12-09 18:04:41,453 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.4 pTM=0.438 ipTM=0.46 tol=5.02
2024-12-09 18:04:51,165 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.8 pTM=0.443 ipTM=0.452 tol=3.6
2024-12-09 18:05:00,862 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.438 ipTM=0.457 tol=3.68
2024-12-09 18:05:10,569 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.6 pTM=0.443 ipTM=0.429 tol=3.02
2024-12-09 18:05:20,272 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.2 pTM=0.437 ipTM=0.44 tol=4.21
2024-12-09 18:05:29,981 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.4 pTM=0.446 ipTM=0.451 tol=3.83
2024-12-09 18:05:39,687 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.436 ipTM=0.427 tol=3.91
2024-12-09 18:05:49,398 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.3 pTM=0.444 ipTM=0.44 tol=4.88
2024-12-09 18:05:49,399 alphafold2_multimer_v3_model_4_seed_000 took 301.1s (30 recycles)
2024-12-09 18:05:59,418 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.3 pTM=0.467 ipTM=0.251
2024-12-09 18:06:09,158 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.444 ipTM=0.49 tol=17.9
2024-12-09 18:06:18,903 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.5 pTM=0.444 ipTM=0.291 tol=7.78
2024-12-09 18:06:28,671 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.2 pTM=0.433 ipTM=0.157 tol=5.17
2024-12-09 18:06:38,427 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.2 pTM=0.441 ipTM=0.526 tol=4.72
2024-12-09 18:06:48,185 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.8 pTM=0.436 ipTM=0.2 tol=5.48
2024-12-09 18:06:57,950 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.4 pTM=0.44 ipTM=0.165 tol=6.54
2024-12-09 18:07:07,702 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.1 pTM=0.436 ipTM=0.159 tol=3.89
2024-12-09 18:07:17,457 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.7 pTM=0.444 ipTM=0.535 tol=4.94
2024-12-09 18:07:27,211 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.1 pTM=0.438 ipTM=0.284 tol=2.79
2024-12-09 18:07:36,973 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.8 pTM=0.444 ipTM=0.171 tol=2.89
2024-12-09 18:07:46,729 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.6 pTM=0.439 ipTM=0.458 tol=4.14
2024-12-09 18:07:56,475 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.5 pTM=0.442 ipTM=0.197 tol=2.74
2024-12-09 18:08:06,227 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.436 ipTM=0.159 tol=4.25
2024-12-09 18:08:15,985 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.9 pTM=0.442 ipTM=0.169 tol=4.8
2024-12-09 18:08:25,740 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.6 pTM=0.438 ipTM=0.426 tol=5.25
2024-12-09 18:08:35,496 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.8 pTM=0.441 ipTM=0.183 tol=3.96
2024-12-09 18:08:45,252 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.7 pTM=0.434 ipTM=0.157 tol=4.18
2024-12-09 18:08:55,010 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.9 pTM=0.439 ipTM=0.164 tol=3.1
2024-12-09 18:09:04,776 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.7 pTM=0.438 ipTM=0.367 tol=4.91
2024-12-09 18:09:14,528 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.6 pTM=0.44 ipTM=0.184 tol=5.33
2024-12-09 18:09:24,286 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.3 pTM=0.436 ipTM=0.159 tol=7.39
2024-12-09 18:09:34,037 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.7 pTM=0.437 ipTM=0.16 tol=6.02
2024-12-09 18:09:43,795 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.6 pTM=0.436 ipTM=0.18 tol=5.19
2024-12-09 18:09:53,544 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.9 pTM=0.442 ipTM=0.263 tol=4.52
2024-12-09 18:10:03,286 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.5 pTM=0.436 ipTM=0.16 tol=3.73
2024-12-09 18:10:13,039 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.2 pTM=0.445 ipTM=0.23 tol=4.06
2024-12-09 18:10:22,790 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.6 pTM=0.438 ipTM=0.196 tol=2.77
2024-12-09 18:10:32,538 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68 pTM=0.439 ipTM=0.165 tol=3.62
2024-12-09 18:10:42,298 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.2 pTM=0.436 ipTM=0.158 tol=5.48
2024-12-09 18:10:52,046 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.6 pTM=0.434 ipTM=0.154 tol=6.97
2024-12-09 18:10:52,046 alphafold2_multimer_v3_model_5_seed_000 took 302.3s (30 recycles)
2024-12-09 18:10:52,357 reranking models by 'multimer' metric
2024-12-09 18:10:55,725 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 18:11:33,014 Relaxation took 40.7s
2024-12-09 18:11:33,014 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.7 pTM=0.449 ipTM=0.598
2024-12-09 18:12:05,993 Relaxation took 33.0s
2024-12-09 18:12:05,993 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.3 pTM=0.444 ipTM=0.44
2024-12-09 18:12:56,755 Relaxation took 50.8s
2024-12-09 18:12:56,756 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.5 pTM=0.435 ipTM=0.163
2024-12-09 18:13:38,712 Relaxation took 42.0s
2024-12-09 18:13:38,712 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.6 pTM=0.434 ipTM=0.154
2024-12-09 18:14:19,998 Relaxation took 41.3s
2024-12-09 18:14:19,998 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.2 pTM=0.421 ipTM=0.145
2024-12-09 18:14:21,288 Done