2024-12-09 19:08:25,524 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 19:08:25,835 Running on GPU
2024-12-09 19:08:29,632 Found 6 citations for tools or databases
2024-12-09 19:08:29,632 Query 1/1: UHRF1_KPNA1 (length 1331)
2024-12-09 19:08:29,918 Sleeping for 9s. Reason: PENDING
2024-12-09 19:08:39,189 Sleeping for 5s. Reason: RUNNING
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2024-12-09 19:09:36,024 Sleeping for 6s. Reason: RUNNING
2024-12-09 19:09:42,281 Sleeping for 9s. Reason: RUNNING
2024-12-09 19:09:51,538 Sleeping for 6s. Reason: RUNNING
2024-12-09 19:09:57,797 Sleeping for 7s. Reason: RUNNING
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2024-12-09 19:10:12,322 Sleeping for 10s. Reason: RUNNING
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2024-12-09 19:10:29,842 Sleeping for 6s. Reason: RUNNING
2024-12-09 19:10:36,097 Sleeping for 5s. Reason: RUNNING
2024-12-09 19:10:41,358 Sleeping for 10s. Reason: RUNNING
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2024-12-09 19:11:08,130 Sleeping for 9s. Reason: RUNNING
2024-12-09 19:11:17,395 Sleeping for 7s. Reason: RUNNING
2024-12-09 19:11:24,651 Sleeping for 10s. Reason: RUNNING
2024-12-09 19:11:34,911 Sleeping for 8s. Reason: RUNNING
2024-12-09 19:11:55,517 Sleeping for 8s. Reason: PENDING
2024-12-09 19:12:03,775 Sleeping for 10s. Reason: RUNNING
2024-12-09 19:12:14,036 Sleeping for 10s. Reason: RUNNING
2024-12-09 19:12:24,295 Sleeping for 7s. Reason: RUNNING
2024-12-09 19:12:31,549 Sleeping for 5s. Reason: RUNNING
2024-12-09 19:12:36,807 Sleeping for 6s. Reason: RUNNING
2024-12-09 19:12:43,069 Sleeping for 7s. Reason: RUNNING
2024-12-09 19:12:50,334 Sleeping for 10s. Reason: RUNNING
2024-12-09 19:13:00,591 Sleeping for 6s. Reason: RUNNING
2024-12-09 19:13:06,865 Sleeping for 10s. Reason: RUNNING
2024-12-09 19:13:17,123 Sleeping for 5s. Reason: RUNNING
2024-12-09 19:13:22,380 Sleeping for 7s. Reason: RUNNING
2024-12-09 19:13:29,634 Sleeping for 8s. Reason: RUNNING
2024-12-09 19:13:37,894 Sleeping for 5s. Reason: RUNNING
2024-12-09 19:13:43,162 Sleeping for 9s. Reason: RUNNING
2024-12-09 19:13:52,430 Sleeping for 8s. Reason: RUNNING
2024-12-09 19:14:06,493 Setting max_seq=508, max_extra_seq=2048
2024-12-09 19:17:32,228 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71 pTM=0.422 ipTM=0.202
2024-12-09 19:18:18,959 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.6 pTM=0.415 ipTM=0.176 tol=10.8
2024-12-09 19:19:05,926 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.4 pTM=0.412 ipTM=0.163 tol=7.86
2024-12-09 19:19:53,054 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.4 pTM=0.409 ipTM=0.173 tol=5.88
2024-12-09 19:20:40,269 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.8 pTM=0.413 ipTM=0.27 tol=5.13
2024-12-09 19:21:27,533 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.1 pTM=0.419 ipTM=0.261 tol=6.2
2024-12-09 19:22:14,853 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.9 pTM=0.414 ipTM=0.292 tol=5.28
2024-12-09 19:23:02,110 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.7 pTM=0.418 ipTM=0.261 tol=4.8
2024-12-09 19:23:49,382 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.1 pTM=0.412 ipTM=0.245 tol=3.29
2024-12-09 19:24:36,672 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.2 pTM=0.419 ipTM=0.269 tol=2.85
2024-12-09 19:25:23,994 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.2 pTM=0.414 ipTM=0.24 tol=3.31
2024-12-09 19:26:11,320 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.3 pTM=0.419 ipTM=0.26 tol=2.77
2024-12-09 19:26:58,718 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.4 pTM=0.413 ipTM=0.225 tol=4.11
2024-12-09 19:27:46,062 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.1 pTM=0.418 ipTM=0.3 tol=4.04
2024-12-09 19:28:33,363 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.1 pTM=0.42 ipTM=0.462 tol=5.25
2024-12-09 19:29:20,636 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.2 pTM=0.425 ipTM=0.506 tol=2.63
2024-12-09 19:30:07,919 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.5 pTM=0.423 ipTM=0.512 tol=3.54
2024-12-09 19:30:55,196 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.5 pTM=0.423 ipTM=0.504 tol=2.41
2024-12-09 19:31:42,500 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.6 pTM=0.423 ipTM=0.515 tol=2.23
2024-12-09 19:32:29,792 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.6 pTM=0.423 ipTM=0.506 tol=1.65
2024-12-09 19:33:17,085 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.6 pTM=0.423 ipTM=0.508 tol=1.4
2024-12-09 19:34:04,414 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.6 pTM=0.424 ipTM=0.508 tol=1.06
2024-12-09 19:34:51,763 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.3 pTM=0.426 ipTM=0.524 tol=1.22
2024-12-09 19:35:39,093 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.2 pTM=0.427 ipTM=0.522 tol=1.25
2024-12-09 19:36:26,405 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73 pTM=0.427 ipTM=0.515 tol=1.38
2024-12-09 19:37:13,714 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.8 pTM=0.425 ipTM=0.51 tol=1.19
2024-12-09 19:38:01,021 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.1 pTM=0.424 ipTM=0.503 tol=1.1
2024-12-09 19:38:48,324 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.1 pTM=0.425 ipTM=0.504 tol=1.87
2024-12-09 19:39:35,593 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.9 pTM=0.426 ipTM=0.524 tol=1.45
2024-12-09 19:40:22,878 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.9 pTM=0.425 ipTM=0.529 tol=1.48
2024-12-09 19:41:10,137 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.2 pTM=0.426 ipTM=0.534 tol=1.81
2024-12-09 19:41:10,138 alphafold2_multimer_v3_model_1_seed_000 took 1618.6s (30 recycles)
2024-12-09 19:41:58,461 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.6 pTM=0.436 ipTM=0.207
2024-12-09 19:42:45,814 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.6 pTM=0.416 ipTM=0.174 tol=5.79
2024-12-09 19:43:33,184 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.4 pTM=0.413 ipTM=0.171 tol=3.62
2024-12-09 19:44:20,556 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=74.4 pTM=0.412 ipTM=0.172 tol=4.16
2024-12-09 19:45:07,984 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=74.6 pTM=0.409 ipTM=0.234 tol=7.18
2024-12-09 19:45:55,369 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.1 pTM=0.416 ipTM=0.464 tol=7.16
2024-12-09 19:46:42,822 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.9 pTM=0.417 ipTM=0.475 tol=5.64
2024-12-09 19:47:30,179 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.4 pTM=0.42 ipTM=0.506 tol=9.03
2024-12-09 19:48:17,543 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.1 pTM=0.42 ipTM=0.494 tol=7.93
2024-12-09 19:49:04,920 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.4 pTM=0.422 ipTM=0.502 tol=1.41
2024-12-09 19:49:52,294 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.6 pTM=0.424 ipTM=0.5 tol=1.75
2024-12-09 19:50:39,662 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.1 pTM=0.423 ipTM=0.5 tol=1.82
2024-12-09 19:51:27,005 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.3 pTM=0.424 ipTM=0.493 tol=1.67
2024-12-09 19:52:14,350 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.3 pTM=0.425 ipTM=0.496 tol=1.42
2024-12-09 19:53:01,672 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.3 pTM=0.423 ipTM=0.483 tol=1.3
2024-12-09 19:53:49,035 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.8 pTM=0.424 ipTM=0.489 tol=2.54
2024-12-09 19:54:36,348 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.6 pTM=0.425 ipTM=0.505 tol=1.08
2024-12-09 19:55:23,640 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.2 pTM=0.424 ipTM=0.495 tol=0.884
2024-12-09 19:56:10,951 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.5 pTM=0.424 ipTM=0.502 tol=0.683
2024-12-09 19:56:58,262 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.1 pTM=0.423 ipTM=0.493 tol=0.662
2024-12-09 19:57:45,586 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.6 pTM=0.424 ipTM=0.503 tol=0.629
2024-12-09 19:58:32,894 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.3 pTM=0.422 ipTM=0.489 tol=0.775
2024-12-09 19:59:20,231 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75.3 pTM=0.424 ipTM=0.503 tol=0.78
2024-12-09 20:00:07,552 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.4 pTM=0.426 ipTM=0.512 tol=0.538
2024-12-09 20:00:54,828 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75.4 pTM=0.423 ipTM=0.489 tol=0.92
2024-12-09 20:01:42,049 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=75.1 pTM=0.422 ipTM=0.492 tol=0.76
2024-12-09 20:02:29,253 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=75.4 pTM=0.423 ipTM=0.492 tol=1.16
2024-12-09 20:03:16,451 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.6 pTM=0.424 ipTM=0.494 tol=0.662
2024-12-09 20:04:03,684 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.2 pTM=0.424 ipTM=0.509 tol=0.725
2024-12-09 20:04:50,944 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.9 pTM=0.425 ipTM=0.515 tol=7.14
2024-12-09 20:05:38,281 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.4 pTM=0.423 ipTM=0.496 tol=4.58
2024-12-09 20:05:38,283 alphafold2_multimer_v3_model_2_seed_000 took 1467.1s (30 recycles)
2024-12-09 20:06:26,656 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.9 pTM=0.424 ipTM=0.179
2024-12-09 20:07:13,932 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.7 pTM=0.451 ipTM=0.224 tol=15.9
2024-12-09 20:08:01,224 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.2 pTM=0.439 ipTM=0.208 tol=4.17
2024-12-09 20:08:48,509 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=72.9 pTM=0.438 ipTM=0.215 tol=4.33
2024-12-09 20:09:35,792 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.4 pTM=0.426 ipTM=0.188 tol=3.24
2024-12-09 20:10:23,086 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.6 pTM=0.425 ipTM=0.189 tol=2.08
2024-12-09 20:11:10,403 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72.3 pTM=0.418 ipTM=0.173 tol=1.93
2024-12-09 20:11:57,752 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.6 pTM=0.417 ipTM=0.171 tol=4.52
2024-12-09 20:12:45,114 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.4 pTM=0.417 ipTM=0.185 tol=3.79
2024-12-09 20:13:32,534 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.2 pTM=0.418 ipTM=0.171 tol=1.88
2024-12-09 20:14:19,986 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.9 pTM=0.418 ipTM=0.252 tol=2.49
2024-12-09 20:15:07,474 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.1 pTM=0.415 ipTM=0.164 tol=2.76
2024-12-09 20:15:54,938 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.8 pTM=0.413 ipTM=0.162 tol=3.48
2024-12-09 20:16:42,312 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.1 pTM=0.446 ipTM=0.629 tol=18.6
2024-12-09 20:17:29,634 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.6 pTM=0.453 ipTM=0.584 tol=4.23
2024-12-09 20:18:16,890 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.9 pTM=0.461 ipTM=0.591 tol=2.07
2024-12-09 20:19:04,151 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.1 pTM=0.469 ipTM=0.61 tol=1.49
2024-12-09 20:19:51,356 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.1 pTM=0.468 ipTM=0.608 tol=1.51
2024-12-09 20:20:38,568 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.4 pTM=0.475 ipTM=0.625 tol=1.34
2024-12-09 20:21:25,777 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.9 pTM=0.475 ipTM=0.623 tol=1.27
2024-12-09 20:22:13,001 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.1 pTM=0.48 ipTM=0.63 tol=1
2024-12-09 20:23:00,250 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.2 pTM=0.48 ipTM=0.624 tol=0.902
2024-12-09 20:23:47,515 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.2 pTM=0.485 ipTM=0.636 tol=0.76
2024-12-09 20:24:34,801 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.9 pTM=0.482 ipTM=0.633 tol=1.33
2024-12-09 20:25:22,084 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.2 pTM=0.491 ipTM=0.645 tol=1.4
2024-12-09 20:26:09,393 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.8 pTM=0.484 ipTM=0.631 tol=0.929
2024-12-09 20:26:56,689 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.6 pTM=0.494 ipTM=0.643 tol=1.58
2024-12-09 20:27:44,005 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.5 pTM=0.485 ipTM=0.632 tol=1.3
2024-12-09 20:28:31,313 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.8 pTM=0.493 ipTM=0.647 tol=1.09
2024-12-09 20:29:18,600 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.3 pTM=0.484 ipTM=0.633 tol=1.05
2024-12-09 20:30:05,883 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.7 pTM=0.49 ipTM=0.641 tol=1.09
2024-12-09 20:30:05,885 alphafold2_multimer_v3_model_3_seed_000 took 1466.5s (30 recycles)
2024-12-09 20:30:54,198 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.7 pTM=0.436 ipTM=0.222
2024-12-09 20:31:41,569 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=70.8 pTM=0.431 ipTM=0.196 tol=8.18
2024-12-09 20:32:28,967 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.2 pTM=0.416 ipTM=0.174 tol=7.55
2024-12-09 20:33:16,367 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.3 pTM=0.418 ipTM=0.194 tol=5.05
2024-12-09 20:34:03,810 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.7 pTM=0.415 ipTM=0.379 tol=10.1
2024-12-09 20:34:51,234 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.5 pTM=0.415 ipTM=0.29 tol=5.39
2024-12-09 20:35:38,630 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=71.5 pTM=0.417 ipTM=0.335 tol=3.96
2024-12-09 20:36:26,032 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.2 pTM=0.415 ipTM=0.334 tol=2.63
2024-12-09 20:37:13,396 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.5 pTM=0.413 ipTM=0.329 tol=9.7
2024-12-09 20:38:00,847 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.1 pTM=0.416 ipTM=0.344 tol=5.28
2024-12-09 20:38:48,241 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71 pTM=0.419 ipTM=0.359 tol=5.35
2024-12-09 20:39:35,601 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.9 pTM=0.415 ipTM=0.327 tol=3.27
2024-12-09 20:40:22,954 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71.8 pTM=0.415 ipTM=0.36 tol=4.98
2024-12-09 20:41:10,298 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.1 pTM=0.415 ipTM=0.321 tol=5.55
2024-12-09 20:41:57,680 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.9 pTM=0.416 ipTM=0.354 tol=4.36
2024-12-09 20:42:45,087 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.2 pTM=0.416 ipTM=0.319 tol=3.78
2024-12-09 20:43:32,452 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.9 pTM=0.416 ipTM=0.33 tol=4.31
2024-12-09 20:44:19,838 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.3 pTM=0.412 ipTM=0.304 tol=2.29
2024-12-09 20:45:07,224 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=71.2 pTM=0.417 ipTM=0.349 tol=2.4
2024-12-09 20:45:54,612 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.5 pTM=0.417 ipTM=0.301 tol=4.84
2024-12-09 20:46:41,979 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.2 pTM=0.414 ipTM=0.34 tol=4.73
2024-12-09 20:47:29,344 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.1 pTM=0.413 ipTM=0.303 tol=4.42
2024-12-09 20:48:16,696 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71 pTM=0.417 ipTM=0.364 tol=4.66
2024-12-09 20:49:04,104 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.2 pTM=0.417 ipTM=0.309 tol=15.2
2024-12-09 20:49:51,453 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.4 pTM=0.426 ipTM=0.213 tol=8.5
2024-12-09 20:50:38,762 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.6 pTM=0.418 ipTM=0.193 tol=4.52
2024-12-09 20:51:26,046 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.4 pTM=0.428 ipTM=0.185 tol=4.16
2024-12-09 20:52:13,341 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.5 pTM=0.415 ipTM=0.199 tol=5.12
2024-12-09 20:53:00,699 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.6 pTM=0.419 ipTM=0.283 tol=2.61
2024-12-09 20:53:48,010 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.2 pTM=0.42 ipTM=0.285 tol=2.63
2024-12-09 20:54:35,343 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.4 pTM=0.417 ipTM=0.317 tol=4.34
2024-12-09 20:54:35,344 alphafold2_multimer_v3_model_4_seed_000 took 1468.4s (30 recycles)
2024-12-09 20:55:23,666 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=69.8 pTM=0.432 ipTM=0.205
2024-12-09 20:56:11,035 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71.1 pTM=0.412 ipTM=0.172 tol=9.04
2024-12-09 20:56:58,432 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.8 pTM=0.411 ipTM=0.161 tol=7.62
2024-12-09 20:57:45,856 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.5 pTM=0.417 ipTM=0.196 tol=3.24
2024-12-09 20:58:33,237 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.5 pTM=0.421 ipTM=0.353 tol=4.23
2024-12-09 20:59:20,658 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.5 pTM=0.42 ipTM=0.317 tol=3.28
2024-12-09 21:00:08,076 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.5 pTM=0.423 ipTM=0.309 tol=4.53
2024-12-09 21:00:55,483 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72.4 pTM=0.422 ipTM=0.229 tol=9.79
2024-12-09 21:01:42,858 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73 pTM=0.422 ipTM=0.279 tol=4.73
2024-12-09 21:02:30,243 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.4 pTM=0.42 ipTM=0.303 tol=2.58
2024-12-09 21:03:17,657 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.2 pTM=0.421 ipTM=0.264 tol=1.67
2024-12-09 21:04:05,085 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=72.4 pTM=0.422 ipTM=0.259 tol=2.04
2024-12-09 21:04:52,480 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.4 pTM=0.42 ipTM=0.259 tol=1.74
2024-12-09 21:05:39,904 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.3 pTM=0.422 ipTM=0.267 tol=2.19
2024-12-09 21:06:27,314 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.3 pTM=0.422 ipTM=0.288 tol=2.46
2024-12-09 21:07:14,746 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72 pTM=0.421 ipTM=0.271 tol=3.39
2024-12-09 21:08:02,124 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.2 pTM=0.42 ipTM=0.252 tol=2.7
2024-12-09 21:08:49,525 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.1 pTM=0.423 ipTM=0.217 tol=4.97
2024-12-09 21:09:36,869 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.3 pTM=0.421 ipTM=0.188 tol=3.68
2024-12-09 21:10:24,246 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.2 pTM=0.421 ipTM=0.19 tol=1.61
2024-12-09 21:11:11,619 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.4 pTM=0.421 ipTM=0.22 tol=2.38
2024-12-09 21:11:59,002 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.4 pTM=0.422 ipTM=0.272 tol=2.55
2024-12-09 21:12:46,404 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.4 pTM=0.421 ipTM=0.299 tol=2.69
2024-12-09 21:13:33,807 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.2 pTM=0.422 ipTM=0.311 tol=1.68
2024-12-09 21:14:21,244 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.2 pTM=0.421 ipTM=0.212 tol=1.81
2024-12-09 21:15:08,677 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.9 pTM=0.427 ipTM=0.175 tol=9.03
2024-12-09 21:15:56,134 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=73.1 pTM=0.424 ipTM=0.164 tol=5.1
2024-12-09 21:16:43,578 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.9 pTM=0.424 ipTM=0.225 tol=3.85
2024-12-09 21:17:30,983 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.8 pTM=0.422 ipTM=0.274 tol=3.27
2024-12-09 21:18:18,346 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.4 pTM=0.424 ipTM=0.289 tol=1.81
2024-12-09 21:19:05,751 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=72.4 pTM=0.424 ipTM=0.281 tol=2.96
2024-12-09 21:19:05,753 alphafold2_multimer_v3_model_5_seed_000 took 1469.3s (30 recycles)
2024-12-09 21:19:06,805 reranking models by 'multimer' metric
2024-12-09 21:19:10,495 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 21:20:47,888 Relaxation took 101.1s
2024-12-09 21:20:47,888 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.7 pTM=0.49 ipTM=0.641
2024-12-09 21:23:13,512 Relaxation took 145.6s
2024-12-09 21:23:13,513 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.2 pTM=0.426 ipTM=0.534
2024-12-09 21:26:49,929 Relaxation took 216.4s
2024-12-09 21:26:49,929 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.4 pTM=0.423 ipTM=0.496
2024-12-09 21:31:15,967 Relaxation took 266.0s
2024-12-09 21:31:15,967 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.4 pTM=0.417 ipTM=0.317
2024-12-09 21:32:50,837 Relaxation took 94.9s
2024-12-09 21:32:50,837 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=72.4 pTM=0.424 ipTM=0.281
2024-12-09 21:32:54,099 Done