2024-12-09 19:17:08,845 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-09 19:17:09,152 Running on GPU 2024-12-09 19:17:12,783 Found 6 citations for tools or databases 2024-12-09 19:17:12,783 Query 1/1: UHRF1_PADI6 (length 1487) 2024-12-09 19:17:22,670 Setting max_seq=508, max_extra_seq=2048 2024-12-09 19:21:09,152 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.7 pTM=0.514 ipTM=0.211 2024-12-09 19:22:12,990 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.2 pTM=0.623 ipTM=0.606 tol=6.04 2024-12-09 19:23:17,033 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.2 pTM=0.558 ipTM=0.341 tol=6.81 2024-12-09 19:24:21,210 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.1 pTM=0.545 ipTM=0.301 tol=9.91 2024-12-09 19:25:25,414 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.7 pTM=0.547 ipTM=0.304 tol=3.05 2024-12-09 19:26:29,567 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.9 pTM=0.541 ipTM=0.255 tol=8.66 2024-12-09 19:27:33,812 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.6 pTM=0.534 ipTM=0.243 tol=1.77 2024-12-09 19:28:38,053 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.9 pTM=0.53 ipTM=0.224 tol=1.69 2024-12-09 19:29:42,286 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.8 pTM=0.531 ipTM=0.239 tol=2.26 2024-12-09 19:30:46,519 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.1 pTM=0.532 ipTM=0.237 tol=2.89 2024-12-09 19:31:50,705 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.6 pTM=0.536 ipTM=0.279 tol=3.63 2024-12-09 19:32:54,856 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.5 pTM=0.549 ipTM=0.33 tol=3.09 2024-12-09 19:33:58,948 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.6 pTM=0.548 ipTM=0.304 tol=3.87 2024-12-09 19:35:03,116 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.9 pTM=0.547 ipTM=0.305 tol=5.67 2024-12-09 19:36:07,320 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.4 pTM=0.588 ipTM=0.534 tol=5.3 2024-12-09 19:37:11,505 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74 pTM=0.613 ipTM=0.644 tol=2.88 2024-12-09 19:38:15,728 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.4 pTM=0.625 ipTM=0.695 tol=2.51 2024-12-09 19:39:19,914 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74 pTM=0.627 ipTM=0.704 tol=1.83 2024-12-09 19:40:24,118 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.2 pTM=0.628 ipTM=0.705 tol=2.13 2024-12-09 19:41:28,350 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.5 pTM=0.631 ipTM=0.715 tol=2.06 2024-12-09 19:42:32,554 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.9 pTM=0.637 ipTM=0.73 tol=3.64 2024-12-09 19:43:36,764 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.5 pTM=0.637 ipTM=0.723 tol=3.78 2024-12-09 19:44:40,949 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.5 pTM=0.64 ipTM=0.738 tol=1.96 2024-12-09 19:45:45,110 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.4 pTM=0.644 ipTM=0.745 tol=1.49 2024-12-09 19:46:49,266 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.4 pTM=0.64 ipTM=0.736 tol=0.796 2024-12-09 19:47:53,428 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.2 pTM=0.641 ipTM=0.736 tol=0.473 2024-12-09 19:47:53,429 alphafold2_multimer_v3_model_1_seed_000 took 1825.7s (25 recycles) 2024-12-09 19:48:58,911 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.2 pTM=0.561 ipTM=0.432 2024-12-09 19:50:03,106 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.6 pTM=0.615 ipTM=0.596 tol=5.4 2024-12-09 19:51:07,354 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.4 pTM=0.642 ipTM=0.71 tol=3.72 2024-12-09 19:52:11,601 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.6 pTM=0.648 ipTM=0.725 tol=3.06 2024-12-09 19:53:15,841 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.8 pTM=0.653 ipTM=0.721 tol=1.13 2024-12-09 19:54:20,099 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.8 pTM=0.646 ipTM=0.702 tol=0.634 2024-12-09 19:55:24,286 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.5 pTM=0.638 ipTM=0.684 tol=0.665 2024-12-09 19:56:28,440 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.3 pTM=0.637 ipTM=0.685 tol=0.808 2024-12-09 19:57:32,612 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.3 pTM=0.637 ipTM=0.684 tol=0.815 2024-12-09 19:58:36,753 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.6 pTM=0.647 ipTM=0.7 tol=0.819 2024-12-09 19:59:40,869 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.5 pTM=0.641 ipTM=0.682 tol=0.861 2024-12-09 20:00:44,996 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.4 pTM=0.643 ipTM=0.692 tol=0.653 2024-12-09 20:01:49,152 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.3 pTM=0.643 ipTM=0.692 tol=0.621 2024-12-09 20:02:53,298 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.1 pTM=0.64 ipTM=0.686 tol=0.507 2024-12-09 20:03:57,430 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.1 pTM=0.639 ipTM=0.688 tol=0.365 2024-12-09 20:03:57,432 alphafold2_multimer_v3_model_2_seed_000 took 962.7s (14 recycles) 2024-12-09 20:05:03,039 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.1 pTM=0.507 ipTM=0.19 2024-12-09 20:06:07,171 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75 pTM=0.546 ipTM=0.368 tol=9.89 2024-12-09 20:07:11,340 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.4 pTM=0.536 ipTM=0.344 tol=12.5 2024-12-09 20:08:15,555 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.6 pTM=0.538 ipTM=0.319 tol=6.61 2024-12-09 20:09:19,763 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.8 pTM=0.532 ipTM=0.254 tol=3.29 2024-12-09 20:10:23,930 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.9 pTM=0.537 ipTM=0.225 tol=11.9 2024-12-09 20:11:28,080 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.1 pTM=0.566 ipTM=0.431 tol=17.6 2024-12-09 20:12:32,211 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.7 pTM=0.568 ipTM=0.461 tol=3.73 2024-12-09 20:13:36,380 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.6 pTM=0.572 ipTM=0.466 tol=1.08 2024-12-09 20:14:40,537 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.9 pTM=0.573 ipTM=0.453 tol=1.03 2024-12-09 20:15:44,716 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.2 pTM=0.593 ipTM=0.533 tol=0.768 2024-12-09 20:16:48,903 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.2 pTM=0.595 ipTM=0.529 tol=1.77 2024-12-09 20:17:53,115 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.6 pTM=0.617 ipTM=0.607 tol=2.57 2024-12-09 20:18:57,287 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.6 pTM=0.632 ipTM=0.656 tol=2.86 2024-12-09 20:20:01,456 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.2 pTM=0.646 ipTM=0.68 tol=1.58 2024-12-09 20:21:05,668 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.2 pTM=0.654 ipTM=0.708 tol=1.05 2024-12-09 20:22:09,904 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.4 pTM=0.661 ipTM=0.712 tol=1.24 2024-12-09 20:23:14,153 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.4 pTM=0.665 ipTM=0.741 tol=1.68 2024-12-09 20:24:18,333 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.5 pTM=0.667 ipTM=0.738 tol=0.84 2024-12-09 20:25:22,497 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.5 pTM=0.667 ipTM=0.752 tol=1.24 2024-12-09 20:26:26,650 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.5 pTM=0.674 ipTM=0.757 tol=1.27 2024-12-09 20:27:30,820 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.5 pTM=0.672 ipTM=0.767 tol=1.62 2024-12-09 20:28:34,982 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.8 pTM=0.678 ipTM=0.772 tol=0.895 2024-12-09 20:29:39,147 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.6 pTM=0.675 ipTM=0.77 tol=0.612 2024-12-09 20:30:43,326 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.9 pTM=0.681 ipTM=0.779 tol=1.14 2024-12-09 20:31:47,485 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.9 pTM=0.68 ipTM=0.779 tol=0.633 2024-12-09 20:32:51,604 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.7 pTM=0.678 ipTM=0.782 tol=0.538 2024-12-09 20:33:55,700 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.8 pTM=0.677 ipTM=0.782 tol=0.672 2024-12-09 20:34:59,800 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.8 pTM=0.678 ipTM=0.784 tol=1.63 2024-12-09 20:36:03,858 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.6 pTM=0.677 ipTM=0.786 tol=0.992 2024-12-09 20:37:07,931 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.7 pTM=0.676 ipTM=0.78 tol=1.1 2024-12-09 20:37:07,932 alphafold2_multimer_v3_model_3_seed_000 took 1989.2s (30 recycles) 2024-12-09 20:38:13,503 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.4 pTM=0.514 ipTM=0.201 2024-12-09 20:39:17,607 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.1 pTM=0.638 ipTM=0.654 tol=6.07 2024-12-09 20:40:21,746 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76 pTM=0.659 ipTM=0.761 tol=3.13 2024-12-09 20:41:25,891 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.1 pTM=0.66 ipTM=0.781 tol=2.05 2024-12-09 20:42:30,044 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.7 pTM=0.662 ipTM=0.782 tol=1.45 2024-12-09 20:43:34,203 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.1 pTM=0.671 ipTM=0.795 tol=1.82 2024-12-09 20:44:38,348 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76 pTM=0.669 ipTM=0.79 tol=1.32 2024-12-09 20:45:42,515 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76 pTM=0.672 ipTM=0.793 tol=0.897 2024-12-09 20:46:46,661 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.8 pTM=0.669 ipTM=0.786 tol=1.91 2024-12-09 20:47:50,808 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.6 pTM=0.677 ipTM=0.797 tol=2.54 2024-12-09 20:48:54,898 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=76.5 pTM=0.676 ipTM=0.791 tol=1.73 2024-12-09 20:49:59,007 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.6 pTM=0.679 ipTM=0.794 tol=1.75 2024-12-09 20:51:03,112 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=76.8 pTM=0.68 ipTM=0.796 tol=1.16 2024-12-09 20:52:07,226 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.7 pTM=0.68 ipTM=0.797 tol=0.825 2024-12-09 20:53:11,368 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=76.6 pTM=0.679 ipTM=0.796 tol=0.552 2024-12-09 20:54:15,516 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=76.7 pTM=0.679 ipTM=0.799 tol=1.42 2024-12-09 20:55:19,661 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.6 pTM=0.68 ipTM=0.795 tol=0.975 2024-12-09 20:56:23,814 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=76.6 pTM=0.681 ipTM=0.797 tol=1.58 2024-12-09 20:57:27,899 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=76.4 pTM=0.676 ipTM=0.791 tol=1.76 2024-12-09 20:58:31,942 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=76.6 pTM=0.679 ipTM=0.792 tol=1.67 2024-12-09 20:59:35,957 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=76.3 pTM=0.677 ipTM=0.791 tol=1.35 2024-12-09 21:00:39,990 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=76.5 pTM=0.678 ipTM=0.792 tol=0.626 2024-12-09 21:01:44,021 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=76.8 pTM=0.68 ipTM=0.794 tol=0.738 2024-12-09 21:02:48,052 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.4 pTM=0.679 ipTM=0.795 tol=1.15 2024-12-09 21:03:52,051 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=76.2 pTM=0.675 ipTM=0.791 tol=1.39 2024-12-09 21:04:56,094 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.7 pTM=0.681 ipTM=0.797 tol=2.04 2024-12-09 21:06:00,220 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=76.6 pTM=0.678 ipTM=0.796 tol=1.24 2024-12-09 21:07:04,369 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=76.5 pTM=0.677 ipTM=0.795 tol=0.786 2024-12-09 21:08:08,518 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=76.6 pTM=0.678 ipTM=0.791 tol=1.19 2024-12-09 21:09:12,712 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.2 pTM=0.674 ipTM=0.791 tol=1.28 2024-12-09 21:10:16,913 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=76.6 pTM=0.68 ipTM=0.794 tol=1.61 2024-12-09 21:10:16,914 alphafold2_multimer_v3_model_4_seed_000 took 1987.7s (30 recycles) 2024-12-09 21:11:22,463 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.2 pTM=0.516 ipTM=0.211 2024-12-09 21:12:26,734 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.6 pTM=0.524 ipTM=0.209 tol=5.56 2024-12-09 21:13:31,037 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.9 pTM=0.527 ipTM=0.213 tol=5.68 2024-12-09 21:14:35,372 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.1 pTM=0.532 ipTM=0.27 tol=5.65 2024-12-09 21:15:39,702 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.8 pTM=0.528 ipTM=0.224 tol=2.41 2024-12-09 21:16:44,052 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.2 pTM=0.533 ipTM=0.267 tol=2.34 2024-12-09 21:17:48,402 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.9 pTM=0.534 ipTM=0.283 tol=3.43 2024-12-09 21:18:52,691 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.1 pTM=0.557 ipTM=0.434 tol=2.84 2024-12-09 21:19:56,999 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.1 pTM=0.552 ipTM=0.389 tol=1.62 2024-12-09 21:21:01,290 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.7 pTM=0.562 ipTM=0.447 tol=2.16 2024-12-09 21:22:05,587 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.8 pTM=0.549 ipTM=0.377 tol=2.07 2024-12-09 21:23:09,888 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.4 pTM=0.54 ipTM=0.289 tol=1.95 2024-12-09 21:24:14,202 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.2 pTM=0.532 ipTM=0.231 tol=2.65 2024-12-09 21:25:18,524 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.4 pTM=0.527 ipTM=0.208 tol=2.94 2024-12-09 21:26:22,689 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.6 pTM=0.613 ipTM=0.615 tol=10.4 2024-12-09 21:27:26,788 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.6 pTM=0.611 ipTM=0.623 tol=4.05 2024-12-09 21:28:30,883 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.3 pTM=0.632 ipTM=0.666 tol=5.55 2024-12-09 21:29:34,972 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.4 pTM=0.636 ipTM=0.673 tol=2.67 2024-12-09 21:30:39,079 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.3 pTM=0.633 ipTM=0.658 tol=1.26 2024-12-09 21:31:43,170 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.2 pTM=0.634 ipTM=0.657 tol=1.44 2024-12-09 21:32:47,264 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.2 pTM=0.636 ipTM=0.67 tol=0.92 2024-12-09 21:33:51,331 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.2 pTM=0.635 ipTM=0.662 tol=0.762 2024-12-09 21:34:55,373 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.4 pTM=0.642 ipTM=0.684 tol=0.845 2024-12-09 21:35:59,514 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.5 pTM=0.647 ipTM=0.692 tol=1.63 2024-12-09 21:37:03,637 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.1 pTM=0.658 ipTM=0.719 tol=1.16 2024-12-09 21:38:07,761 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.6 pTM=0.668 ipTM=0.748 tol=0.96 2024-12-09 21:39:11,958 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.4 pTM=0.667 ipTM=0.751 tol=1.14 2024-12-09 21:40:16,206 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.2 pTM=0.663 ipTM=0.736 tol=0.744 2024-12-09 21:41:20,464 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76 pTM=0.66 ipTM=0.73 tol=0.686 2024-12-09 21:42:24,681 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.9 pTM=0.659 ipTM=0.734 tol=0.714 2024-12-09 21:43:28,902 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.1 pTM=0.662 ipTM=0.738 tol=1.26 2024-12-09 21:43:28,904 alphafold2_multimer_v3_model_5_seed_000 took 1990.7s (30 recycles) 2024-12-09 21:43:30,210 reranking models by 'multimer' metric 2024-12-09 21:43:31,679 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-09 21:45:06,864 Relaxation took 96.7s 2024-12-09 21:45:06,864 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=76.6 pTM=0.68 ipTM=0.794 2024-12-09 21:47:08,400 Relaxation took 121.5s 2024-12-09 21:47:08,400 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.7 pTM=0.676 ipTM=0.78 2024-12-09 21:50:01,111 Relaxation took 172.7s 2024-12-09 21:50:01,111 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.1 pTM=0.662 ipTM=0.738 2024-12-09 21:52:15,633 Relaxation took 134.5s 2024-12-09 21:52:15,633 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.2 pTM=0.641 ipTM=0.736 2024-12-09 21:53:15,788 Relaxation took 60.2s 2024-12-09 21:53:15,788 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.1 pTM=0.639 ipTM=0.688 2024-12-09 21:53:19,212 Done