2024-12-09 20:20:39,116 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 20:20:39,428 Running on GPU
2024-12-09 20:20:43,010 Found 6 citations for tools or databases
2024-12-09 20:20:43,010 Query 1/1: VPS18_IFT20 (length 1105)
2024-12-09 20:20:43,307 Sleeping for 5s. Reason: PENDING
2024-12-09 20:20:48,564 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:20:55,818 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:21:04,081 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:21:13,339 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:21:18,595 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:21:25,849 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:21:35,113 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:21:44,372 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:21:50,636 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:21:58,903 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:22:05,161 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:22:11,413 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:22:19,667 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:22:24,929 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:22:30,180 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:22:36,663 Sleeping for 8s. Reason: PENDING
2024-12-09 20:22:44,937 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:22:50,191 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:22:57,457 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:23:05,722 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:23:12,980 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:23:22,237 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:23:28,494 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:23:33,756 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:23:42,019 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:23:49,273 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:23:58,007 Setting max_seq=508, max_extra_seq=2048
2024-12-09 20:27:11,459 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.8 pTM=0.553 ipTM=0.156
2024-12-09 20:27:38,706 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=77.9 pTM=0.547 ipTM=0.166 tol=6.77
2024-12-09 20:28:06,047 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.8 pTM=0.551 ipTM=0.197 tol=3.81
2024-12-09 20:28:33,444 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.8 pTM=0.55 ipTM=0.2 tol=2.29
2024-12-09 20:29:00,891 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.7 pTM=0.545 ipTM=0.199 tol=2.73
2024-12-09 20:29:28,355 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.6 pTM=0.548 ipTM=0.198 tol=1.49
2024-12-09 20:29:55,840 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.4 pTM=0.54 ipTM=0.203 tol=1.9
2024-12-09 20:30:23,359 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=77.8 pTM=0.547 ipTM=0.203 tol=1.61
2024-12-09 20:30:50,875 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.6 pTM=0.542 ipTM=0.213 tol=1.03
2024-12-09 20:31:18,387 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.6 pTM=0.541 ipTM=0.208 tol=2.07
2024-12-09 20:31:45,912 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.7 pTM=0.539 ipTM=0.211 tol=1.96
2024-12-09 20:32:13,419 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.6 pTM=0.541 ipTM=0.213 tol=1.28
2024-12-09 20:32:40,940 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.6 pTM=0.538 ipTM=0.206 tol=1.01
2024-12-09 20:33:08,469 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=77.6 pTM=0.537 ipTM=0.207 tol=1.1
2024-12-09 20:33:36,011 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=77.8 pTM=0.542 ipTM=0.198 tol=1.68
2024-12-09 20:34:03,526 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.8 pTM=0.542 ipTM=0.197 tol=2.24
2024-12-09 20:34:31,050 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=77.7 pTM=0.537 ipTM=0.198 tol=1.38
2024-12-09 20:34:58,553 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.6 pTM=0.537 ipTM=0.202 tol=1.82
2024-12-09 20:35:26,061 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.7 pTM=0.532 ipTM=0.195 tol=3.02
2024-12-09 20:35:53,551 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.6 pTM=0.535 ipTM=0.21 tol=5.32
2024-12-09 20:36:21,038 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.8 pTM=0.54 ipTM=0.24 tol=2.33
2024-12-09 20:36:48,550 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.8 pTM=0.539 ipTM=0.225 tol=1.51
2024-12-09 20:37:16,050 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78 pTM=0.542 ipTM=0.213 tol=1.54
2024-12-09 20:37:43,557 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.8 pTM=0.539 ipTM=0.217 tol=1.57
2024-12-09 20:38:11,063 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.8 pTM=0.537 ipTM=0.206 tol=1.25
2024-12-09 20:38:38,593 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.7 pTM=0.534 ipTM=0.213 tol=1.24
2024-12-09 20:39:06,108 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.7 pTM=0.539 ipTM=0.226 tol=2.84
2024-12-09 20:39:33,628 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.7 pTM=0.542 ipTM=0.215 tol=0.936
2024-12-09 20:40:01,167 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77.6 pTM=0.539 ipTM=0.21 tol=1.23
2024-12-09 20:40:28,695 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.6 pTM=0.539 ipTM=0.202 tol=2.04
2024-12-09 20:40:56,214 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=77.6 pTM=0.545 ipTM=0.206 tol=1.88
2024-12-09 20:40:56,215 alphafold2_multimer_v3_model_1_seed_000 took 1013.0s (30 recycles)
2024-12-09 20:41:24,481 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.9 pTM=0.549 ipTM=0.148
2024-12-09 20:41:51,974 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.1 pTM=0.557 ipTM=0.252 tol=18.3
2024-12-09 20:42:19,493 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.1 pTM=0.567 ipTM=0.274 tol=4.17
2024-12-09 20:42:47,002 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.4 pTM=0.566 ipTM=0.288 tol=2.73
2024-12-09 20:43:14,538 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.4 pTM=0.563 ipTM=0.237 tol=1.77
2024-12-09 20:43:42,073 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.4 pTM=0.565 ipTM=0.249 tol=2.53
2024-12-09 20:44:09,608 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.4 pTM=0.559 ipTM=0.235 tol=1.69
2024-12-09 20:44:37,155 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.6 pTM=0.566 ipTM=0.217 tol=1.64
2024-12-09 20:45:04,701 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.2 pTM=0.567 ipTM=0.203 tol=3.51
2024-12-09 20:45:32,229 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.6 pTM=0.565 ipTM=0.201 tol=6.23
2024-12-09 20:45:59,787 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.4 pTM=0.565 ipTM=0.198 tol=2.73
2024-12-09 20:46:27,336 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.9 pTM=0.566 ipTM=0.208 tol=1.31
2024-12-09 20:46:54,874 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.9 pTM=0.561 ipTM=0.197 tol=3.68
2024-12-09 20:47:22,397 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.6 pTM=0.562 ipTM=0.237 tol=7.75
2024-12-09 20:47:49,938 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.9 pTM=0.571 ipTM=0.231 tol=2.52
2024-12-09 20:48:17,456 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.5 pTM=0.562 ipTM=0.235 tol=1.6
2024-12-09 20:48:44,988 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.5 pTM=0.561 ipTM=0.22 tol=2.36
2024-12-09 20:49:12,529 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.1 pTM=0.558 ipTM=0.191 tol=3.59
2024-12-09 20:49:40,044 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.6 pTM=0.552 ipTM=0.274 tol=10.1
2024-12-09 20:50:07,573 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.2 pTM=0.562 ipTM=0.292 tol=3.49
2024-12-09 20:50:35,094 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.1 pTM=0.562 ipTM=0.276 tol=0.518
2024-12-09 20:51:02,601 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=79.2 pTM=0.563 ipTM=0.283 tol=2.46
2024-12-09 20:51:30,119 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=79.2 pTM=0.562 ipTM=0.286 tol=2.29
2024-12-09 20:51:57,641 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=79.7 pTM=0.568 ipTM=0.298 tol=2.16
2024-12-09 20:52:25,148 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79.5 pTM=0.565 ipTM=0.299 tol=0.939
2024-12-09 20:52:52,687 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=79.1 pTM=0.559 ipTM=0.282 tol=1.49
2024-12-09 20:53:20,217 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=79 pTM=0.56 ipTM=0.274 tol=1.59
2024-12-09 20:53:47,743 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.9 pTM=0.568 ipTM=0.277 tol=2.7
2024-12-09 20:54:15,277 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.7 pTM=0.566 ipTM=0.251 tol=2.13
2024-12-09 20:54:42,815 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=79.1 pTM=0.578 ipTM=0.26 tol=1.65
2024-12-09 20:55:10,332 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.8 pTM=0.573 ipTM=0.246 tol=1.34
2024-12-09 20:55:10,333 alphafold2_multimer_v3_model_2_seed_000 took 853.4s (30 recycles)
2024-12-09 20:55:38,600 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.1 pTM=0.531 ipTM=0.189
2024-12-09 20:56:06,122 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.5 pTM=0.545 ipTM=0.203 tol=6.81
2024-12-09 20:56:33,665 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.5 pTM=0.549 ipTM=0.258 tol=2.88
2024-12-09 20:57:01,190 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=78.4 pTM=0.547 ipTM=0.219 tol=2.13
2024-12-09 20:57:28,718 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.1 pTM=0.539 ipTM=0.22 tol=2.26
2024-12-09 20:57:56,227 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.8 pTM=0.546 ipTM=0.219 tol=4.09
2024-12-09 20:58:23,731 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.2 pTM=0.546 ipTM=0.229 tol=3.52
2024-12-09 20:58:51,242 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.1 pTM=0.542 ipTM=0.215 tol=2.66
2024-12-09 20:59:18,774 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76.8 pTM=0.539 ipTM=0.221 tol=9.29
2024-12-09 20:59:46,275 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.3 pTM=0.54 ipTM=0.214 tol=10.1
2024-12-09 21:00:13,799 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.3 pTM=0.545 ipTM=0.223 tol=2.46
2024-12-09 21:00:41,288 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.5 pTM=0.548 ipTM=0.214 tol=2.14
2024-12-09 21:01:08,805 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.9 pTM=0.542 ipTM=0.221 tol=3.21
2024-12-09 21:01:36,320 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.7 pTM=0.542 ipTM=0.212 tol=2.31
2024-12-09 21:02:03,817 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.9 pTM=0.546 ipTM=0.225 tol=3.36
2024-12-09 21:02:31,322 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.9 pTM=0.549 ipTM=0.22 tol=3.22
2024-12-09 21:02:58,829 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.1 pTM=0.544 ipTM=0.214 tol=2.61
2024-12-09 21:03:26,334 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78 pTM=0.543 ipTM=0.226 tol=2.13
2024-12-09 21:03:53,840 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.2 pTM=0.536 ipTM=0.221 tol=3.12
2024-12-09 21:04:21,365 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.1 pTM=0.537 ipTM=0.218 tol=1.17
2024-12-09 21:04:48,893 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.8 pTM=0.545 ipTM=0.194 tol=5.36
2024-12-09 21:05:16,362 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.6 pTM=0.544 ipTM=0.302 tol=9.04
2024-12-09 21:05:43,904 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77 pTM=0.543 ipTM=0.21 tol=5.66
2024-12-09 21:06:11,471 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.1 pTM=0.548 ipTM=0.2 tol=9.16
2024-12-09 21:06:39,009 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.7 pTM=0.549 ipTM=0.208 tol=4.51
2024-12-09 21:07:06,569 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.6 pTM=0.541 ipTM=0.208 tol=1.74
2024-12-09 21:07:34,145 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.8 pTM=0.536 ipTM=0.201 tol=7.57
2024-12-09 21:08:01,703 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.1 pTM=0.548 ipTM=0.198 tol=7.81
2024-12-09 21:08:29,241 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.8 pTM=0.548 ipTM=0.242 tol=7
2024-12-09 21:08:56,808 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.6 pTM=0.55 ipTM=0.19 tol=5.47
2024-12-09 21:09:24,356 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.2 pTM=0.548 ipTM=0.218 tol=5.31
2024-12-09 21:09:24,357 alphafold2_multimer_v3_model_3_seed_000 took 853.3s (30 recycles)
2024-12-09 21:09:52,705 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.3 pTM=0.545 ipTM=0.199
2024-12-09 21:10:20,282 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=76.2 pTM=0.556 ipTM=0.226 tol=4.43
2024-12-09 21:10:47,869 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.6 pTM=0.555 ipTM=0.216 tol=5.22
2024-12-09 21:11:15,452 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.9 pTM=0.55 ipTM=0.232 tol=5.38
2024-12-09 21:11:43,032 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.9 pTM=0.548 ipTM=0.231 tol=6.54
2024-12-09 21:12:10,595 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.1 pTM=0.559 ipTM=0.239 tol=2.88
2024-12-09 21:12:38,207 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.9 pTM=0.552 ipTM=0.213 tol=4.63
2024-12-09 21:13:05,812 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.1 pTM=0.553 ipTM=0.252 tol=4.68
2024-12-09 21:13:33,417 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.6 pTM=0.559 ipTM=0.242 tol=1.41
2024-12-09 21:14:01,025 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.2 pTM=0.557 ipTM=0.239 tol=0.719
2024-12-09 21:14:28,637 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.4 pTM=0.55 ipTM=0.218 tol=2.41
2024-12-09 21:14:56,222 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.2 pTM=0.556 ipTM=0.266 tol=2.86
2024-12-09 21:15:23,840 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.2 pTM=0.552 ipTM=0.219 tol=3.04
2024-12-09 21:15:51,468 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.4 pTM=0.555 ipTM=0.242 tol=2.86
2024-12-09 21:16:19,095 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.4 pTM=0.554 ipTM=0.219 tol=2.37
2024-12-09 21:16:46,704 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.4 pTM=0.557 ipTM=0.245 tol=2.59
2024-12-09 21:17:14,315 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.3 pTM=0.55 ipTM=0.238 tol=1.11
2024-12-09 21:17:41,931 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.2 pTM=0.553 ipTM=0.226 tol=2.38
2024-12-09 21:18:09,532 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.3 pTM=0.547 ipTM=0.254 tol=2.55
2024-12-09 21:18:37,140 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.2 pTM=0.554 ipTM=0.245 tol=2.33
2024-12-09 21:19:04,744 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.4 pTM=0.557 ipTM=0.271 tol=1.77
2024-12-09 21:19:32,358 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.1 pTM=0.553 ipTM=0.238 tol=2.21
2024-12-09 21:19:59,956 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.3 pTM=0.554 ipTM=0.231 tol=1.6
2024-12-09 21:20:27,548 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77 pTM=0.549 ipTM=0.271 tol=1.88
2024-12-09 21:20:55,148 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.1 pTM=0.554 ipTM=0.235 tol=1.93
2024-12-09 21:21:22,758 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.8 pTM=0.546 ipTM=0.233 tol=2.19
2024-12-09 21:21:50,363 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77 pTM=0.549 ipTM=0.235 tol=1.64
2024-12-09 21:22:17,956 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.2 pTM=0.558 ipTM=0.273 tol=3.59
2024-12-09 21:22:45,547 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.2 pTM=0.555 ipTM=0.26 tol=2.6
2024-12-09 21:23:13,142 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.4 pTM=0.561 ipTM=0.249 tol=1.92
2024-12-09 21:23:40,748 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.6 pTM=0.567 ipTM=0.227 tol=2.09
2024-12-09 21:23:40,749 alphafold2_multimer_v3_model_4_seed_000 took 855.6s (30 recycles)
2024-12-09 21:24:09,073 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.2 pTM=0.535 ipTM=0.206
2024-12-09 21:24:36,674 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76 pTM=0.537 ipTM=0.19 tol=11.3
2024-12-09 21:25:04,305 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.4 pTM=0.547 ipTM=0.196 tol=2.06
2024-12-09 21:25:31,928 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=76.9 pTM=0.555 ipTM=0.207 tol=1.9
2024-12-09 21:25:59,514 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77 pTM=0.553 ipTM=0.208 tol=1.62
2024-12-09 21:26:27,087 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.8 pTM=0.559 ipTM=0.195 tol=2.4
2024-12-09 21:26:54,644 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77 pTM=0.557 ipTM=0.203 tol=2.46
2024-12-09 21:27:22,208 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.9 pTM=0.552 ipTM=0.187 tol=3.98
2024-12-09 21:27:49,764 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=77.2 pTM=0.569 ipTM=0.213 tol=2.89
2024-12-09 21:28:17,311 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77 pTM=0.554 ipTM=0.196 tol=2.58
2024-12-09 21:28:44,845 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.9 pTM=0.554 ipTM=0.202 tol=2.87
2024-12-09 21:29:12,406 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.7 pTM=0.56 ipTM=0.202 tol=6.59
2024-12-09 21:29:39,965 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.7 pTM=0.556 ipTM=0.205 tol=5.93
2024-12-09 21:30:07,529 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=77.3 pTM=0.561 ipTM=0.193 tol=4.11
2024-12-09 21:30:35,078 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=77.1 pTM=0.562 ipTM=0.209 tol=4.64
2024-12-09 21:31:02,623 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.9 pTM=0.555 ipTM=0.198 tol=3.45
2024-12-09 21:31:30,172 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.1 pTM=0.556 ipTM=0.216 tol=4.22
2024-12-09 21:31:57,727 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=77 pTM=0.556 ipTM=0.207 tol=2.07
2024-12-09 21:32:25,261 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.9 pTM=0.554 ipTM=0.219 tol=3.81
2024-12-09 21:32:52,808 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77 pTM=0.557 ipTM=0.204 tol=4.82
2024-12-09 21:33:20,363 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.1 pTM=0.565 ipTM=0.225 tol=5.5
2024-12-09 21:33:47,888 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.8 pTM=0.556 ipTM=0.207 tol=3.53
2024-12-09 21:34:15,430 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.2 pTM=0.555 ipTM=0.21 tol=1.49
2024-12-09 21:34:42,967 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77 pTM=0.553 ipTM=0.194 tol=3.57
2024-12-09 21:35:10,531 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77 pTM=0.558 ipTM=0.204 tol=1.98
2024-12-09 21:35:38,104 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.9 pTM=0.549 ipTM=0.196 tol=2.03
2024-12-09 21:36:05,672 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.8 pTM=0.551 ipTM=0.201 tol=1.08
2024-12-09 21:36:33,240 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.2 pTM=0.555 ipTM=0.2 tol=5.86
2024-12-09 21:37:00,790 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.7 pTM=0.556 ipTM=0.203 tol=5.48
2024-12-09 21:37:28,360 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.7 pTM=0.558 ipTM=0.191 tol=2.9
2024-12-09 21:37:55,917 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.8 pTM=0.56 ipTM=0.207 tol=3.68
2024-12-09 21:37:55,918 alphafold2_multimer_v3_model_5_seed_000 took 854.4s (30 recycles)
2024-12-09 21:37:56,665 reranking models by 'multimer' metric
2024-12-09 21:38:00,644 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 21:39:27,214 Relaxation took 90.5s
2024-12-09 21:39:27,214 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.8 pTM=0.573 ipTM=0.246
2024-12-09 21:41:31,201 Relaxation took 124.0s
2024-12-09 21:41:31,201 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.6 pTM=0.567 ipTM=0.227
2024-12-09 21:43:54,593 Relaxation took 143.4s
2024-12-09 21:43:54,594 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.2 pTM=0.548 ipTM=0.218
2024-12-09 21:46:00,314 Relaxation took 125.7s
2024-12-09 21:46:00,314 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.8 pTM=0.56 ipTM=0.207
2024-12-09 21:48:01,823 Relaxation took 121.5s
2024-12-09 21:48:01,824 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.6 pTM=0.545 ipTM=0.206
2024-12-09 21:48:03,976 Done