2024-12-09 20:27:28,757 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 20:27:29,071 Running on GPU
2024-12-09 20:27:32,569 Found 6 citations for tools or databases
2024-12-09 20:27:32,569 Query 1/1: VPS18_KRT2 (length 1612)
2024-12-09 20:27:32,868 Sleeping for 6s. Reason: PENDING
2024-12-09 20:27:39,126 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:27:44,379 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:27:49,637 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:27:54,893 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:28:02,149 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:28:10,412 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:28:19,682 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:28:29,954 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:28:40,215 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:28:50,482 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:28:59,746 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:29:08,005 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:29:18,268 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:29:25,526 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:29:33,786 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:29:42,041 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:29:51,300 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:30:10,264 Sleeping for 8s. Reason: PENDING
2024-12-09 20:30:18,528 Sleeping for 6s. Reason: PENDING
2024-12-09 20:30:24,786 Sleeping for 6s. Reason: PENDING
2024-12-09 20:30:31,040 Sleeping for 5s. Reason: PENDING
2024-12-09 20:30:36,298 Sleeping for 9s. Reason: PENDING
2024-12-09 20:30:45,555 Sleeping for 7s. Reason: PENDING
2024-12-09 20:30:52,807 Sleeping for 7s. Reason: PENDING
2024-12-09 20:31:00,061 Sleeping for 10s. Reason: PENDING
2024-12-09 20:31:10,321 Sleeping for 7s. Reason: PENDING
2024-12-09 20:31:17,580 Sleeping for 9s. Reason: PENDING
2024-12-09 20:31:26,836 Sleeping for 9s. Reason: PENDING
2024-12-09 20:31:36,103 Sleeping for 9s. Reason: PENDING
2024-12-09 20:31:45,370 Sleeping for 7s. Reason: PENDING
2024-12-09 20:31:52,628 Sleeping for 7s. Reason: PENDING
2024-12-09 20:31:59,894 Sleeping for 7s. Reason: PENDING
2024-12-09 20:32:07,147 Sleeping for 7s. Reason: PENDING
2024-12-09 20:32:14,404 Sleeping for 7s. Reason: PENDING
2024-12-09 20:32:21,660 Sleeping for 10s. Reason: PENDING
2024-12-09 20:32:31,918 Sleeping for 7s. Reason: PENDING
2024-12-09 20:32:39,180 Sleeping for 8s. Reason: PENDING
2024-12-09 20:32:47,443 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:32:54,699 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:33:00,955 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:33:08,223 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:33:16,480 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:33:26,740 Sleeping for 7s. Reason: RUNNING
2024-12-09 20:33:33,998 Sleeping for 8s. Reason: RUNNING
2024-12-09 20:33:42,260 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:33:47,515 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:33:57,777 Sleeping for 6s. Reason: RUNNING
2024-12-09 20:34:04,032 Sleeping for 5s. Reason: RUNNING
2024-12-09 20:34:09,282 Sleeping for 10s. Reason: RUNNING
2024-12-09 20:34:19,550 Sleeping for 9s. Reason: RUNNING
2024-12-09 20:34:33,759 Setting max_seq=508, max_extra_seq=2048
2024-12-09 20:38:07,321 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.4 pTM=0.416 ipTM=0.157
2024-12-09 20:39:27,900 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.1 pTM=0.421 ipTM=0.16 tol=39.6
2024-12-09 20:40:48,518 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.3 pTM=0.417 ipTM=0.159 tol=13.5
2024-12-09 20:42:09,159 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.4 pTM=0.416 ipTM=0.16 tol=9.71
2024-12-09 20:43:29,833 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.2 pTM=0.415 ipTM=0.159 tol=7.65
2024-12-09 20:44:50,492 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.1 pTM=0.417 ipTM=0.16 tol=5.7
2024-12-09 20:46:11,160 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61 pTM=0.411 ipTM=0.16 tol=4.88
2024-12-09 20:47:31,809 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.1 pTM=0.415 ipTM=0.161 tol=5.94
2024-12-09 20:48:52,508 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.9 pTM=0.413 ipTM=0.161 tol=4.44
2024-12-09 20:50:13,258 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.4 pTM=0.406 ipTM=0.16 tol=8.27
2024-12-09 20:51:33,966 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.6 pTM=0.414 ipTM=0.165 tol=10.7
2024-12-09 20:52:54,673 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.2 pTM=0.416 ipTM=0.167 tol=6.66
2024-12-09 20:54:15,351 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.6 pTM=0.415 ipTM=0.167 tol=5.91
2024-12-09 20:55:36,039 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.5 pTM=0.413 ipTM=0.166 tol=5.02
2024-12-09 20:56:56,731 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.8 pTM=0.413 ipTM=0.165 tol=4.23
2024-12-09 20:58:17,459 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.6 pTM=0.41 ipTM=0.164 tol=3.45
2024-12-09 20:59:38,201 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.6 pTM=0.409 ipTM=0.165 tol=5.85
2024-12-09 21:00:58,953 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61 pTM=0.411 ipTM=0.163 tol=6.25
2024-12-09 21:02:19,725 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61 pTM=0.408 ipTM=0.163 tol=4.3
2024-12-09 21:03:40,438 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.9 pTM=0.41 ipTM=0.162 tol=3.18
2024-12-09 21:05:01,095 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.8 pTM=0.41 ipTM=0.163 tol=6.16
2024-12-09 21:06:21,787 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.7 pTM=0.412 ipTM=0.163 tol=6.6
2024-12-09 21:07:42,482 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.8 pTM=0.407 ipTM=0.163 tol=4.07
2024-12-09 21:09:03,208 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.8 pTM=0.41 ipTM=0.163 tol=2.61
2024-12-09 21:10:23,969 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.8 pTM=0.406 ipTM=0.164 tol=2.6
2024-12-09 21:11:44,735 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61 pTM=0.407 ipTM=0.164 tol=2.51
2024-12-09 21:13:05,505 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.1 pTM=0.407 ipTM=0.163 tol=4.23
2024-12-09 21:14:26,304 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61 pTM=0.41 ipTM=0.164 tol=5.5
2024-12-09 21:15:47,049 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.9 pTM=0.41 ipTM=0.166 tol=2.98
2024-12-09 21:17:07,820 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.8 pTM=0.411 ipTM=0.164 tol=3
2024-12-09 21:18:28,567 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.9 pTM=0.41 ipTM=0.162 tol=2.88
2024-12-09 21:18:28,569 alphafold2_multimer_v3_model_1_seed_000 took 2629.7s (30 recycles)
2024-12-09 21:19:50,951 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.7 pTM=0.411 ipTM=0.157
2024-12-09 21:21:11,772 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.3 pTM=0.427 ipTM=0.162 tol=28.2
2024-12-09 21:22:32,458 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.8 pTM=0.434 ipTM=0.162 tol=25.2
2024-12-09 21:23:53,120 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.3 pTM=0.437 ipTM=0.165 tol=12.3
2024-12-09 21:25:13,789 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.7 pTM=0.431 ipTM=0.167 tol=9.08
2024-12-09 21:26:34,575 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.8 pTM=0.438 ipTM=0.161 tol=16.2
2024-12-09 21:27:55,385 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.6 pTM=0.433 ipTM=0.159 tol=14.3
2024-12-09 21:29:16,158 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.9 pTM=0.431 ipTM=0.159 tol=8.63
2024-12-09 21:30:36,872 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.8 pTM=0.436 ipTM=0.163 tol=14.5
2024-12-09 21:31:57,594 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60 pTM=0.429 ipTM=0.161 tol=7.59
2024-12-09 21:33:18,369 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.2 pTM=0.439 ipTM=0.161 tol=9.13
2024-12-09 21:34:39,084 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.9 pTM=0.433 ipTM=0.16 tol=10.2
2024-12-09 21:35:59,802 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.1 pTM=0.431 ipTM=0.16 tol=9.32
2024-12-09 21:37:20,479 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.7 pTM=0.43 ipTM=0.161 tol=9.72
2024-12-09 21:38:41,196 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60 pTM=0.43 ipTM=0.16 tol=7.34
2024-12-09 21:40:02,004 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.8 pTM=0.429 ipTM=0.161 tol=6.3
2024-12-09 21:41:22,801 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.9 pTM=0.428 ipTM=0.16 tol=5.78
2024-12-09 21:42:43,610 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.2 pTM=0.432 ipTM=0.161 tol=5.59
2024-12-09 21:44:04,374 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.2 pTM=0.431 ipTM=0.163 tol=7.12
2024-12-09 21:45:25,132 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.3 pTM=0.429 ipTM=0.161 tol=6.5
2024-12-09 21:46:45,895 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.4 pTM=0.431 ipTM=0.161 tol=4.38
2024-12-09 21:48:06,631 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.2 pTM=0.43 ipTM=0.16 tol=3.67
2024-12-09 21:49:27,336 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.9 pTM=0.428 ipTM=0.162 tol=5.76
2024-12-09 21:50:48,054 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.4 pTM=0.433 ipTM=0.161 tol=5.98
2024-12-09 21:52:08,769 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.4 pTM=0.427 ipTM=0.162 tol=12.1
2024-12-09 21:53:29,549 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.6 pTM=0.428 ipTM=0.16 tol=13.2
2024-12-09 21:54:50,300 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60 pTM=0.427 ipTM=0.162 tol=7.65
2024-12-09 21:56:11,041 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=60.1 pTM=0.43 ipTM=0.162 tol=10.8
2024-12-09 21:57:31,811 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.2 pTM=0.43 ipTM=0.161 tol=8.78
2024-12-09 21:58:52,514 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.1 pTM=0.434 ipTM=0.163 tol=10.5
2024-12-09 22:00:13,219 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.9 pTM=0.429 ipTM=0.162 tol=9.8
2024-12-09 22:00:13,221 alphafold2_multimer_v3_model_2_seed_000 took 2503.1s (30 recycles)
2024-12-09 22:01:35,703 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.7 pTM=0.424 ipTM=0.161
2024-12-09 22:02:56,500 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.2 pTM=0.436 ipTM=0.176 tol=21.9
2024-12-09 22:04:17,246 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.4 pTM=0.441 ipTM=0.205 tol=15.2
2024-12-09 22:05:38,085 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.4 pTM=0.437 ipTM=0.187 tol=13.4
2024-12-09 22:06:58,933 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.1 pTM=0.438 ipTM=0.187 tol=9.38
2024-12-09 22:08:19,800 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.6 pTM=0.436 ipTM=0.185 tol=12.8
2024-12-09 22:09:40,712 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.2 pTM=0.435 ipTM=0.229 tol=15.6
2024-12-09 22:11:01,558 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.1 pTM=0.444 ipTM=0.249 tol=15.7
2024-12-09 22:12:22,380 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.2 pTM=0.445 ipTM=0.245 tol=18.2
2024-12-09 22:13:43,180 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.8 pTM=0.436 ipTM=0.248 tol=9.8
2024-12-09 22:15:03,966 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.8 pTM=0.443 ipTM=0.249 tol=7.57
2024-12-09 22:16:24,720 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.7 pTM=0.44 ipTM=0.25 tol=16.2
2024-12-09 22:17:45,534 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.3 pTM=0.436 ipTM=0.247 tol=14.6
2024-12-09 22:19:06,349 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.4 pTM=0.436 ipTM=0.242 tol=12.4
2024-12-09 22:20:27,149 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.5 pTM=0.437 ipTM=0.243 tol=8.91
2024-12-09 22:21:47,911 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.6 pTM=0.436 ipTM=0.238 tol=5.74
2024-12-09 22:23:08,662 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.2 pTM=0.434 ipTM=0.235 tol=14.3
2024-12-09 22:24:29,382 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.7 pTM=0.439 ipTM=0.243 tol=10.6
2024-12-09 22:25:50,101 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.7 pTM=0.427 ipTM=0.245 tol=5.94
2024-12-09 22:27:10,869 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.8 pTM=0.432 ipTM=0.234 tol=10.5
2024-12-09 22:28:31,567 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.6 pTM=0.428 ipTM=0.261 tol=19.7
2024-12-09 22:29:52,427 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60 pTM=0.428 ipTM=0.231 tol=20.2
2024-12-09 22:31:13,197 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.7 pTM=0.433 ipTM=0.248 tol=10.8
2024-12-09 22:32:34,004 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.7 pTM=0.435 ipTM=0.245 tol=11.6
2024-12-09 22:33:54,834 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.6 pTM=0.427 ipTM=0.235 tol=6.79
2024-12-09 22:35:15,566 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.7 pTM=0.428 ipTM=0.242 tol=11
2024-12-09 22:36:36,372 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.6 pTM=0.429 ipTM=0.223 tol=11.1
2024-12-09 22:37:57,089 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.4 pTM=0.43 ipTM=0.259 tol=11.5
2024-12-09 22:39:17,809 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.9 pTM=0.429 ipTM=0.246 tol=6.24
2024-12-09 22:40:38,551 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.2 pTM=0.431 ipTM=0.235 tol=10.9
2024-12-09 22:41:59,336 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.4 pTM=0.428 ipTM=0.244 tol=14.5
2024-12-09 22:41:59,338 alphafold2_multimer_v3_model_3_seed_000 took 2504.6s (30 recycles)
2024-12-09 22:43:22,009 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.1 pTM=0.421 ipTM=0.159
2024-12-09 22:44:42,752 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.4 pTM=0.442 ipTM=0.186 tol=21.1
2024-12-09 22:46:03,439 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.4 pTM=0.441 ipTM=0.196 tol=9.82
2024-12-09 22:47:24,240 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.6 pTM=0.44 ipTM=0.193 tol=10.1
2024-12-09 22:48:45,038 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.4 pTM=0.438 ipTM=0.191 tol=7.12
2024-12-09 22:50:05,874 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.1 pTM=0.44 ipTM=0.194 tol=13.4
2024-12-09 22:51:26,744 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.4 pTM=0.439 ipTM=0.193 tol=14.4
2024-12-09 22:52:47,592 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.8 pTM=0.438 ipTM=0.192 tol=10.6
2024-12-09 22:54:08,396 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.6 pTM=0.442 ipTM=0.193 tol=19.2
2024-12-09 22:55:29,264 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.8 pTM=0.436 ipTM=0.176 tol=19.2
2024-12-09 22:56:50,102 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.5 pTM=0.441 ipTM=0.173 tol=10.5
2024-12-09 22:58:10,919 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.6 pTM=0.438 ipTM=0.191 tol=10.1
2024-12-09 22:59:31,800 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.3 pTM=0.438 ipTM=0.189 tol=13.7
2024-12-09 23:00:52,609 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.5 pTM=0.438 ipTM=0.179 tol=16.8
2024-12-09 23:02:13,393 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.8 pTM=0.439 ipTM=0.187 tol=7.66
2024-12-09 23:03:34,201 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.4 pTM=0.436 ipTM=0.18 tol=5.63
2024-12-09 23:04:55,032 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.4 pTM=0.437 ipTM=0.184 tol=8.45
2024-12-09 23:06:15,850 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.5 pTM=0.439 ipTM=0.188 tol=7.37
2024-12-09 23:07:36,668 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.5 pTM=0.436 ipTM=0.188 tol=8.46
2024-12-09 23:08:57,485 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.4 pTM=0.436 ipTM=0.188 tol=8.82
2024-12-09 23:10:18,362 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.6 pTM=0.438 ipTM=0.187 tol=5.75
2024-12-09 23:11:39,243 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.4 pTM=0.436 ipTM=0.18 tol=11.4
2024-12-09 23:13:00,158 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.4 pTM=0.436 ipTM=0.187 tol=11.3
2024-12-09 23:14:21,033 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.9 pTM=0.443 ipTM=0.184 tol=14.1
2024-12-09 23:15:41,913 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.6 pTM=0.435 ipTM=0.191 tol=9.12
2024-12-09 23:17:02,739 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.6 pTM=0.436 ipTM=0.183 tol=7.7
2024-12-09 23:18:23,617 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.5 pTM=0.437 ipTM=0.189 tol=10.8
2024-12-09 23:19:44,442 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.4 pTM=0.438 ipTM=0.184 tol=13.6
2024-12-09 23:21:05,306 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.4 pTM=0.438 ipTM=0.188 tol=9.75
2024-12-09 23:22:26,184 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.2 pTM=0.437 ipTM=0.178 tol=7.53
2024-12-09 23:23:47,040 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.1 pTM=0.434 ipTM=0.188 tol=7.79
2024-12-09 23:23:47,041 alphafold2_multimer_v3_model_4_seed_000 took 2506.2s (30 recycles)
2024-12-09 23:25:09,781 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.2 pTM=0.437 ipTM=0.151
2024-12-09 23:26:30,844 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58 pTM=0.436 ipTM=0.153 tol=30.6
2024-12-09 23:27:51,773 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.3 pTM=0.437 ipTM=0.168 tol=19
2024-12-09 23:29:12,646 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.4 pTM=0.438 ipTM=0.156 tol=15.4
2024-12-09 23:30:33,452 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.8 pTM=0.438 ipTM=0.158 tol=11.2
2024-12-09 23:31:54,288 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.8 pTM=0.442 ipTM=0.155 tol=12.2
2024-12-09 23:33:15,139 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59 pTM=0.439 ipTM=0.155 tol=10
2024-12-09 23:34:36,044 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.2 pTM=0.448 ipTM=0.156 tol=10.2
2024-12-09 23:35:56,927 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.6 pTM=0.45 ipTM=0.157 tol=10.4
2024-12-09 23:37:17,817 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.4 pTM=0.438 ipTM=0.168 tol=15.7
2024-12-09 23:38:38,677 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.3 pTM=0.451 ipTM=0.173 tol=14.1
2024-12-09 23:39:59,455 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.1 pTM=0.444 ipTM=0.188 tol=8.75
2024-12-09 23:41:20,250 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.3 pTM=0.446 ipTM=0.187 tol=8.73
2024-12-09 23:42:41,051 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.9 pTM=0.441 ipTM=0.19 tol=9.05
2024-12-09 23:44:01,848 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.9 pTM=0.445 ipTM=0.182 tol=15.4
2024-12-09 23:45:22,652 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.9 pTM=0.44 ipTM=0.169 tol=6.05
2024-12-09 23:46:43,458 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.8 pTM=0.44 ipTM=0.169 tol=11.1
2024-12-09 23:48:04,268 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.4 pTM=0.45 ipTM=0.175 tol=9.72
2024-12-09 23:49:24,975 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.3 pTM=0.44 ipTM=0.189 tol=11.4
2024-12-09 23:50:45,699 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.9 pTM=0.443 ipTM=0.179 tol=7.73
2024-12-09 23:52:06,433 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59 pTM=0.441 ipTM=0.179 tol=6.06
2024-12-09 23:53:27,190 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.8 pTM=0.439 ipTM=0.174 tol=9.18
2024-12-09 23:54:48,000 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.7 pTM=0.438 ipTM=0.24 tol=9.73
2024-12-09 23:56:08,879 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.7 pTM=0.451 ipTM=0.206 tol=12.2
2024-12-09 23:57:29,692 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=60.1 pTM=0.436 ipTM=0.203 tol=10.5
2024-12-09 23:58:50,519 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.1 pTM=0.437 ipTM=0.188 tol=6.87
2024-12-10 00:00:11,305 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60 pTM=0.437 ipTM=0.182 tol=5.13
2024-12-10 00:01:32,091 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60.1 pTM=0.438 ipTM=0.175 tol=3.91
2024-12-10 00:02:52,897 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.8 pTM=0.436 ipTM=0.165 tol=5.53
2024-12-10 00:04:13,663 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.2 pTM=0.435 ipTM=0.172 tol=17
2024-12-10 00:05:34,447 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.4 pTM=0.435 ipTM=0.17 tol=10.8
2024-12-10 00:05:34,449 alphafold2_multimer_v3_model_5_seed_000 took 2505.8s (30 recycles)
2024-12-10 00:05:35,972 reranking models by 'multimer' metric
2024-12-10 00:05:38,498 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 00:10:15,771 Relaxation took 279.8s
2024-12-10 00:10:15,771 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.4 pTM=0.428 ipTM=0.244
2024-12-10 00:13:36,484 Relaxation took 200.7s
2024-12-10 00:13:36,485 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.1 pTM=0.434 ipTM=0.188
2024-12-10 00:16:40,637 Relaxation took 184.2s
2024-12-10 00:16:40,637 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.4 pTM=0.435 ipTM=0.17
2024-12-10 00:19:17,665 Relaxation took 157.0s
2024-12-10 00:19:17,666 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.9 pTM=0.429 ipTM=0.162
2024-12-10 00:21:37,919 Relaxation took 140.3s
2024-12-10 00:21:37,919 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.9 pTM=0.41 ipTM=0.162
2024-12-10 00:21:41,668 Done