2024-12-09 21:04:02,284 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 21:04:02,599 Running on GPU
2024-12-09 21:04:06,425 Found 6 citations for tools or databases
2024-12-09 21:04:06,425 Query 1/1: VPS18_KRT38 (length 1429)
2024-12-09 21:04:06,729 Sleeping for 6s. Reason: PENDING
2024-12-09 21:04:12,987 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:04:19,246 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:04:29,504 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:04:35,759 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:04:41,012 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:04:48,270 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:04:58,534 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:05:04,789 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:05:14,050 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:05:24,310 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:05:33,572 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:05:40,989 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:05:51,260 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:05:58,519 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:06:03,777 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:06:09,031 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:06:15,289 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:06:40,110 Sleeping for 10s. Reason: PENDING
2024-12-09 21:06:50,371 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:06:56,634 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:07:06,891 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:07:15,143 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:07:22,402 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:07:28,667 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:07:33,927 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:07:39,177 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:07:44,432 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:07:49,716 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:07:58,987 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:08:07,252 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:08:17,692 Setting max_seq=508, max_extra_seq=2048
2024-12-09 21:12:05,972 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.7 pTM=0.472 ipTM=0.15
2024-12-09 21:13:02,975 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.8 pTM=0.479 ipTM=0.154 tol=15.5
2024-12-09 21:14:00,086 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.6 pTM=0.478 ipTM=0.158 tol=11.6
2024-12-09 21:14:57,233 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.4 pTM=0.481 ipTM=0.172 tol=21.6
2024-12-09 21:15:54,433 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.6 pTM=0.471 ipTM=0.165 tol=8.66
2024-12-09 21:16:51,639 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.4 pTM=0.474 ipTM=0.181 tol=10.3
2024-12-09 21:17:48,817 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.7 pTM=0.474 ipTM=0.192 tol=7.61
2024-12-09 21:18:45,973 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.7 pTM=0.468 ipTM=0.188 tol=7.14
2024-12-09 21:19:43,112 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.471 ipTM=0.182 tol=7.48
2024-12-09 21:20:40,276 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.9 pTM=0.472 ipTM=0.172 tol=14.7
2024-12-09 21:21:37,431 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.9 pTM=0.472 ipTM=0.184 tol=7.95
2024-12-09 21:22:34,610 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.8 pTM=0.467 ipTM=0.193 tol=10.1
2024-12-09 21:23:31,784 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.7 pTM=0.473 ipTM=0.189 tol=5.89
2024-12-09 21:24:28,938 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.8 pTM=0.469 ipTM=0.175 tol=4.14
2024-12-09 21:25:26,087 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67 pTM=0.469 ipTM=0.177 tol=7.63
2024-12-09 21:26:23,261 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.1 pTM=0.466 ipTM=0.176 tol=8.88
2024-12-09 21:27:20,406 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.9 pTM=0.474 ipTM=0.173 tol=4.77
2024-12-09 21:28:17,524 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.5 pTM=0.48 ipTM=0.19 tol=5.92
2024-12-09 21:29:14,626 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.9 pTM=0.469 ipTM=0.177 tol=4.97
2024-12-09 21:30:11,746 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.5 pTM=0.472 ipTM=0.183 tol=3.97
2024-12-09 21:31:08,847 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.9 pTM=0.472 ipTM=0.192 tol=2.89
2024-12-09 21:32:05,975 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.471 ipTM=0.183 tol=2.9
2024-12-09 21:33:03,088 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67 pTM=0.464 ipTM=0.174 tol=5.65
2024-12-09 21:34:00,273 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.8 pTM=0.469 ipTM=0.18 tol=4.02
2024-12-09 21:34:57,451 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.9 pTM=0.463 ipTM=0.178 tol=4.04
2024-12-09 21:35:54,606 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.6 pTM=0.465 ipTM=0.181 tol=4.27
2024-12-09 21:36:51,763 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.4 pTM=0.47 ipTM=0.171 tol=5.09
2024-12-09 21:37:48,911 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.6 pTM=0.472 ipTM=0.185 tol=5.38
2024-12-09 21:38:46,056 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.2 pTM=0.475 ipTM=0.18 tol=4.87
2024-12-09 21:39:43,248 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.3 pTM=0.467 ipTM=0.183 tol=4.73
2024-12-09 21:40:40,419 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.3 pTM=0.472 ipTM=0.166 tol=5.43
2024-12-09 21:40:40,420 alphafold2_multimer_v3_model_1_seed_000 took 1937.6s (30 recycles)
2024-12-09 21:41:38,858 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.4 pTM=0.488 ipTM=0.165
2024-12-09 21:42:36,058 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.3 pTM=0.503 ipTM=0.175 tol=17.1
2024-12-09 21:43:33,237 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.6 pTM=0.497 ipTM=0.174 tol=6.77
2024-12-09 21:44:30,441 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.1 pTM=0.506 ipTM=0.177 tol=5.27
2024-12-09 21:45:27,706 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.2 pTM=0.493 ipTM=0.17 tol=12
2024-12-09 21:46:24,993 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.2 pTM=0.488 ipTM=0.162 tol=12.2
2024-12-09 21:47:22,247 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.4 pTM=0.489 ipTM=0.164 tol=9.36
2024-12-09 21:48:19,504 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.2 pTM=0.476 ipTM=0.17 tol=16.7
2024-12-09 21:49:16,742 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.6 pTM=0.487 ipTM=0.191 tol=19.7
2024-12-09 21:50:13,907 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67 pTM=0.49 ipTM=0.196 tol=7.92
2024-12-09 21:51:11,104 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.2 pTM=0.493 ipTM=0.206 tol=10.3
2024-12-09 21:52:08,322 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.6 pTM=0.485 ipTM=0.186 tol=5.98
2024-12-09 21:53:05,588 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.485 ipTM=0.195 tol=6.59
2024-12-09 21:54:02,837 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.6 pTM=0.482 ipTM=0.207 tol=6.95
2024-12-09 21:55:00,069 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.8 pTM=0.487 ipTM=0.199 tol=7.59
2024-12-09 21:55:57,283 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.488 ipTM=0.188 tol=7.75
2024-12-09 21:56:54,466 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.8 pTM=0.49 ipTM=0.206 tol=10.7
2024-12-09 21:57:51,664 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.9 pTM=0.497 ipTM=0.206 tol=8.22
2024-12-09 21:58:48,840 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.6 pTM=0.481 ipTM=0.185 tol=4.12
2024-12-09 21:59:46,012 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.2 pTM=0.495 ipTM=0.189 tol=4.91
2024-12-09 22:00:43,174 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.1 pTM=0.491 ipTM=0.206 tol=8.64
2024-12-09 22:01:40,341 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.1 pTM=0.492 ipTM=0.201 tol=5.32
2024-12-09 22:02:37,511 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.9 pTM=0.487 ipTM=0.186 tol=3.82
2024-12-09 22:03:34,661 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.4 pTM=0.49 ipTM=0.21 tol=3.99
2024-12-09 22:04:31,832 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.1 pTM=0.485 ipTM=0.215 tol=4.27
2024-12-09 22:05:29,025 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67 pTM=0.481 ipTM=0.196 tol=4.17
2024-12-09 22:06:26,200 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.4 pTM=0.491 ipTM=0.194 tol=3.64
2024-12-09 22:07:23,400 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.2 pTM=0.491 ipTM=0.2 tol=4.77
2024-12-09 22:08:20,596 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.3 pTM=0.493 ipTM=0.207 tol=4.95
2024-12-09 22:09:17,819 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.9 pTM=0.484 ipTM=0.198 tol=2.15
2024-12-09 22:10:15,042 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67 pTM=0.485 ipTM=0.198 tol=2.31
2024-12-09 22:10:15,043 alphafold2_multimer_v3_model_2_seed_000 took 1773.4s (30 recycles)
2024-12-09 22:11:13,581 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.9 pTM=0.464 ipTM=0.163
2024-12-09 22:12:10,900 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.1 pTM=0.479 ipTM=0.181 tol=21.6
2024-12-09 22:13:08,208 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.8 pTM=0.483 ipTM=0.201 tol=10.5
2024-12-09 22:14:05,482 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.2 pTM=0.484 ipTM=0.251 tol=11.1
2024-12-09 22:15:02,746 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.2 pTM=0.482 ipTM=0.244 tol=5.18
2024-12-09 22:16:00,054 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.9 pTM=0.478 ipTM=0.194 tol=6.72
2024-12-09 22:16:57,346 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.1 pTM=0.472 ipTM=0.24 tol=6.06
2024-12-09 22:17:54,706 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.1 pTM=0.467 ipTM=0.192 tol=6.64
2024-12-09 22:18:52,054 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.7 pTM=0.477 ipTM=0.242 tol=7.14
2024-12-09 22:19:49,397 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.2 pTM=0.474 ipTM=0.194 tol=8.32
2024-12-09 22:20:46,683 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.8 pTM=0.48 ipTM=0.242 tol=7.41
2024-12-09 22:21:43,983 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.4 pTM=0.473 ipTM=0.206 tol=7.79
2024-12-09 22:22:41,294 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.3 pTM=0.473 ipTM=0.236 tol=6.73
2024-12-09 22:23:38,612 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.6 pTM=0.475 ipTM=0.217 tol=9.43
2024-12-09 22:24:35,901 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.7 pTM=0.484 ipTM=0.238 tol=8.52
2024-12-09 22:25:33,189 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.6 pTM=0.481 ipTM=0.219 tol=8.48
2024-12-09 22:26:30,456 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.1 pTM=0.484 ipTM=0.232 tol=7.65
2024-12-09 22:27:27,751 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.9 pTM=0.489 ipTM=0.225 tol=6.43
2024-12-09 22:28:25,048 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.6 pTM=0.469 ipTM=0.231 tol=7.98
2024-12-09 22:29:22,348 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.8 pTM=0.489 ipTM=0.221 tol=8.12
2024-12-09 22:30:19,649 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.7 pTM=0.476 ipTM=0.233 tol=7.67
2024-12-09 22:31:16,945 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.4 pTM=0.473 ipTM=0.215 tol=8.7
2024-12-09 22:32:14,262 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.8 pTM=0.47 ipTM=0.24 tol=8.29
2024-12-09 22:33:11,596 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.4 pTM=0.483 ipTM=0.215 tol=6.63
2024-12-09 22:34:08,932 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.5 pTM=0.468 ipTM=0.237 tol=7.57
2024-12-09 22:35:06,248 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.2 pTM=0.476 ipTM=0.213 tol=8.7
2024-12-09 22:36:03,527 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.8 pTM=0.476 ipTM=0.237 tol=10.3
2024-12-09 22:37:00,804 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.4 pTM=0.475 ipTM=0.22 tol=10.1
2024-12-09 22:37:58,094 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.4 pTM=0.487 ipTM=0.243 tol=12.7
2024-12-09 22:38:55,416 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.2 pTM=0.472 ipTM=0.216 tol=10
2024-12-09 22:39:52,720 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.2 pTM=0.481 ipTM=0.24 tol=9.91
2024-12-09 22:39:52,722 alphafold2_multimer_v3_model_3_seed_000 took 1776.5s (30 recycles)
2024-12-09 22:40:51,145 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.5 pTM=0.479 ipTM=0.192
2024-12-09 22:41:48,348 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.4 pTM=0.496 ipTM=0.195 tol=13.1
2024-12-09 22:42:45,535 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.1 pTM=0.497 ipTM=0.207 tol=6.36
2024-12-09 22:43:42,722 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.6 pTM=0.493 ipTM=0.204 tol=4.78
2024-12-09 22:44:39,914 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.9 pTM=0.491 ipTM=0.203 tol=5.11
2024-12-09 22:45:37,137 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.5 pTM=0.492 ipTM=0.198 tol=3.03
2024-12-09 22:46:34,403 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64 pTM=0.483 ipTM=0.186 tol=5.72
2024-12-09 22:47:31,669 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.6 pTM=0.483 ipTM=0.199 tol=5.78
2024-12-09 22:48:28,932 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.4 pTM=0.484 ipTM=0.198 tol=3.94
2024-12-09 22:49:26,218 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.3 pTM=0.483 ipTM=0.2 tol=5.01
2024-12-09 22:50:23,511 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.2 pTM=0.487 ipTM=0.189 tol=6.01
2024-12-09 22:51:20,779 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.4 pTM=0.487 ipTM=0.198 tol=4.71
2024-12-09 22:52:18,063 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.3 pTM=0.484 ipTM=0.196 tol=6.03
2024-12-09 22:53:15,302 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.4 pTM=0.486 ipTM=0.199 tol=5.57
2024-12-09 22:54:12,530 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.5 pTM=0.487 ipTM=0.194 tol=5.04
2024-12-09 22:55:09,745 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.1 pTM=0.487 ipTM=0.191 tol=3.75
2024-12-09 22:56:06,986 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64 pTM=0.489 ipTM=0.177 tol=8.12
2024-12-09 22:57:04,185 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.6 pTM=0.495 ipTM=0.189 tol=6.17
2024-12-09 22:58:01,411 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.9 pTM=0.479 ipTM=0.191 tol=5.21
2024-12-09 22:58:58,622 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.1 pTM=0.488 ipTM=0.194 tol=5.75
2024-12-09 22:59:55,853 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.2 pTM=0.487 ipTM=0.192 tol=5.82
2024-12-09 23:00:53,101 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64 pTM=0.484 ipTM=0.194 tol=6.89
2024-12-09 23:01:50,366 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.9 pTM=0.481 ipTM=0.183 tol=4.77
2024-12-09 23:02:47,641 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.1 pTM=0.485 ipTM=0.186 tol=3.75
2024-12-09 23:03:44,939 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.7 pTM=0.479 ipTM=0.177 tol=5.95
2024-12-09 23:04:42,212 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.1 pTM=0.482 ipTM=0.182 tol=4.64
2024-12-09 23:05:39,493 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.9 pTM=0.485 ipTM=0.173 tol=6.95
2024-12-09 23:06:36,725 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.1 pTM=0.483 ipTM=0.176 tol=6.88
2024-12-09 23:07:33,956 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.7 pTM=0.484 ipTM=0.172 tol=9.33
2024-12-09 23:08:31,213 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.5 pTM=0.477 ipTM=0.179 tol=6.18
2024-12-09 23:09:28,497 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.7 pTM=0.48 ipTM=0.169 tol=6.5
2024-12-09 23:09:28,499 alphafold2_multimer_v3_model_4_seed_000 took 1774.6s (30 recycles)
2024-12-09 23:10:26,890 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.6 pTM=0.477 ipTM=0.225
2024-12-09 23:11:24,122 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.2 pTM=0.483 ipTM=0.201 tol=9.06
2024-12-09 23:12:21,334 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.6 pTM=0.504 ipTM=0.261 tol=7.52
2024-12-09 23:13:18,557 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.9 pTM=0.497 ipTM=0.215 tol=7.08
2024-12-09 23:14:15,743 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.8 pTM=0.503 ipTM=0.253 tol=5.02
2024-12-09 23:15:12,964 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.5 ipTM=0.214 tol=5.95
2024-12-09 23:16:10,163 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.4 pTM=0.498 ipTM=0.235 tol=6.49
2024-12-09 23:17:07,399 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.2 pTM=0.493 ipTM=0.214 tol=4.42
2024-12-09 23:18:04,610 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66 pTM=0.501 ipTM=0.246 tol=6.76
2024-12-09 23:19:01,878 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.2 pTM=0.496 ipTM=0.21 tol=3.79
2024-12-09 23:19:59,122 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.499 ipTM=0.215 tol=3.73
2024-12-09 23:20:56,366 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.2 pTM=0.496 ipTM=0.213 tol=6.96
2024-12-09 23:21:53,566 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.8 pTM=0.496 ipTM=0.23 tol=7.46
2024-12-09 23:22:50,787 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.1 pTM=0.495 ipTM=0.211 tol=6.32
2024-12-09 23:23:48,015 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.9 pTM=0.499 ipTM=0.219 tol=5.44
2024-12-09 23:24:45,254 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.1 pTM=0.496 ipTM=0.21 tol=4.12
2024-12-09 23:25:42,424 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.7 pTM=0.499 ipTM=0.21 tol=4.79
2024-12-09 23:26:39,575 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.4 pTM=0.5 ipTM=0.219 tol=5.25
2024-12-09 23:27:36,757 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.6 pTM=0.493 ipTM=0.219 tol=5.93
2024-12-09 23:28:33,996 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.1 pTM=0.499 ipTM=0.205 tol=3.66
2024-12-09 23:29:31,247 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.3 pTM=0.497 ipTM=0.21 tol=3.98
2024-12-09 23:30:28,497 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.1 pTM=0.494 ipTM=0.215 tol=6.59
2024-12-09 23:31:25,693 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.5 pTM=0.492 ipTM=0.211 tol=4.32
2024-12-09 23:32:22,930 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.2 pTM=0.496 ipTM=0.208 tol=3.66
2024-12-09 23:33:20,147 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.8 pTM=0.494 ipTM=0.227 tol=4.07
2024-12-09 23:34:17,366 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.2 pTM=0.494 ipTM=0.208 tol=4.64
2024-12-09 23:35:14,604 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.6 pTM=0.5 ipTM=0.209 tol=5.73
2024-12-09 23:36:11,843 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.2 pTM=0.499 ipTM=0.212 tol=5.82
2024-12-09 23:37:09,089 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.8 pTM=0.499 ipTM=0.208 tol=5.5
2024-12-09 23:38:06,290 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65 pTM=0.491 ipTM=0.205 tol=4.16
2024-12-09 23:39:03,476 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.8 pTM=0.499 ipTM=0.218 tol=4.53
2024-12-09 23:39:03,477 alphafold2_multimer_v3_model_5_seed_000 took 1773.8s (30 recycles)
2024-12-09 23:39:04,680 reranking models by 'multimer' metric
2024-12-09 23:39:06,314 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 23:41:48,031 Relaxation took 163.4s
2024-12-09 23:41:48,031 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.2 pTM=0.481 ipTM=0.24
2024-12-09 23:43:40,374 Relaxation took 112.3s
2024-12-09 23:43:40,375 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.8 pTM=0.499 ipTM=0.218
2024-12-09 23:46:52,549 Relaxation took 192.2s
2024-12-09 23:46:52,549 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67 pTM=0.485 ipTM=0.198
2024-12-09 23:49:34,152 Relaxation took 161.6s
2024-12-09 23:49:34,153 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.7 pTM=0.48 ipTM=0.169
2024-12-09 23:51:38,834 Relaxation took 124.7s
2024-12-09 23:51:38,834 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.3 pTM=0.472 ipTM=0.166
2024-12-09 23:51:41,861 Done