2024-12-09 21:04:58,386 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 21:04:58,713 Running on GPU
2024-12-09 21:05:02,167 Found 6 citations for tools or databases
2024-12-09 21:05:02,168 Query 1/1: VPS41_CXorf48 (length 1118)
2024-12-09 21:05:02,457 Sleeping for 5s. Reason: PENDING
2024-12-09 21:05:07,710 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:05:17,976 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:05:25,254 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:05:30,512 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:05:40,777 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:05:47,035 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:05:53,296 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:05:59,554 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:06:09,815 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:06:15,075 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:06:23,330 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:06:32,602 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:06:39,860 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:06:46,118 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:06:55,388 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:07:02,639 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:07:12,907 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:07:18,163 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:07:24,424 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:07:33,685 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:07:41,945 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:07:48,206 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:07:56,558 Sleeping for 6s. Reason: PENDING
2024-12-09 21:08:02,816 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:08:13,085 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:08:23,344 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:08:32,607 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:08:39,860 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:08:47,123 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:08:53,379 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:09:03,636 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:09:13,909 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:09:22,175 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:09:27,430 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:09:35,268 Setting max_seq=508, max_extra_seq=2048
2024-12-09 21:12:33,302 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.6 pTM=0.469 ipTM=0.167
2024-12-09 21:13:02,166 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.8 pTM=0.469 ipTM=0.143 tol=7.58
2024-12-09 21:13:31,161 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.9 pTM=0.466 ipTM=0.138 tol=5.76
2024-12-09 21:14:00,213 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.1 pTM=0.458 ipTM=0.133 tol=7.84
2024-12-09 21:14:29,317 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.5 pTM=0.458 ipTM=0.132 tol=3.46
2024-12-09 21:14:58,476 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.5 pTM=0.458 ipTM=0.131 tol=3.52
2024-12-09 21:15:27,686 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.5 pTM=0.458 ipTM=0.131 tol=5.98
2024-12-09 21:15:56,861 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.7 pTM=0.457 ipTM=0.132 tol=4.63
2024-12-09 21:16:26,049 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=76.8 pTM=0.456 ipTM=0.131 tol=2.42
2024-12-09 21:16:55,252 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=76.8 pTM=0.458 ipTM=0.13 tol=1.86
2024-12-09 21:17:24,479 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.6 pTM=0.455 ipTM=0.131 tol=3.3
2024-12-09 21:17:53,715 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.1 pTM=0.46 ipTM=0.132 tol=3.28
2024-12-09 21:18:22,946 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77 pTM=0.456 ipTM=0.129 tol=2.11
2024-12-09 21:18:52,218 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.9 pTM=0.46 ipTM=0.13 tol=1.57
2024-12-09 21:19:21,468 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=76.8 pTM=0.458 ipTM=0.131 tol=3.52
2024-12-09 21:19:50,714 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=76.9 pTM=0.454 ipTM=0.132 tol=4.48
2024-12-09 21:20:19,976 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.8 pTM=0.458 ipTM=0.132 tol=6.5
2024-12-09 21:20:49,223 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.7 pTM=0.458 ipTM=0.131 tol=5.97
2024-12-09 21:21:18,488 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.8 pTM=0.452 ipTM=0.13 tol=3.21
2024-12-09 21:21:47,765 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77 pTM=0.455 ipTM=0.13 tol=2.11
2024-12-09 21:22:17,069 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.8 pTM=0.455 ipTM=0.131 tol=2.83
2024-12-09 21:22:46,333 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=76.9 pTM=0.455 ipTM=0.13 tol=4.5
2024-12-09 21:23:15,606 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.4 pTM=0.455 ipTM=0.132 tol=4.23
2024-12-09 21:23:44,859 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.8 pTM=0.457 ipTM=0.131 tol=3.34
2024-12-09 21:24:14,133 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.8 pTM=0.455 ipTM=0.132 tol=4.76
2024-12-09 21:24:43,391 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=76.9 pTM=0.455 ipTM=0.132 tol=3.79
2024-12-09 21:25:12,645 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=76.9 pTM=0.457 ipTM=0.132 tol=3.04
2024-12-09 21:25:41,946 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=76.8 pTM=0.458 ipTM=0.133 tol=1.76
2024-12-09 21:26:11,214 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77 pTM=0.455 ipTM=0.131 tol=1.12
2024-12-09 21:26:40,450 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=76.9 pTM=0.453 ipTM=0.131 tol=2.82
2024-12-09 21:27:09,695 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=76.9 pTM=0.456 ipTM=0.131 tol=1.56
2024-12-09 21:27:09,696 alphafold2_multimer_v3_model_1_seed_000 took 1049.3s (30 recycles)
2024-12-09 21:27:39,705 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.5 pTM=0.467 ipTM=0.134
2024-12-09 21:28:09,030 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.2 pTM=0.462 ipTM=0.136 tol=6.28
2024-12-09 21:28:38,375 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.5 pTM=0.466 ipTM=0.137 tol=4.36
2024-12-09 21:29:07,745 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.7 pTM=0.463 ipTM=0.132 tol=6.95
2024-12-09 21:29:37,060 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=77.1 pTM=0.462 ipTM=0.129 tol=6.67
2024-12-09 21:30:06,360 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=77.1 pTM=0.459 ipTM=0.128 tol=4.12
2024-12-09 21:30:35,663 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=76.9 pTM=0.46 ipTM=0.128 tol=3.98
2024-12-09 21:31:04,974 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.6 pTM=0.462 ipTM=0.131 tol=5.79
2024-12-09 21:31:34,295 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.4 pTM=0.461 ipTM=0.131 tol=3.36
2024-12-09 21:32:03,618 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77.4 pTM=0.46 ipTM=0.13 tol=1.47
2024-12-09 21:32:32,958 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.5 pTM=0.462 ipTM=0.13 tol=2.52
2024-12-09 21:33:02,247 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.9 pTM=0.464 ipTM=0.135 tol=3.86
2024-12-09 21:33:31,533 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.5 pTM=0.458 ipTM=0.135 tol=1.4
2024-12-09 21:34:00,845 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.6 pTM=0.458 ipTM=0.133 tol=2.47
2024-12-09 21:34:30,163 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.6 pTM=0.46 ipTM=0.13 tol=2.51
2024-12-09 21:34:59,480 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=77.4 pTM=0.458 ipTM=0.131 tol=1.49
2024-12-09 21:35:28,809 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=77.6 pTM=0.463 ipTM=0.129 tol=3.15
2024-12-09 21:35:58,144 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.5 pTM=0.46 ipTM=0.132 tol=2.81
2024-12-09 21:36:27,449 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=77.4 pTM=0.458 ipTM=0.131 tol=1.31
2024-12-09 21:36:56,760 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=77.4 pTM=0.458 ipTM=0.129 tol=2.4
2024-12-09 21:37:26,063 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=77.4 pTM=0.459 ipTM=0.131 tol=2.2
2024-12-09 21:37:55,360 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=77.6 pTM=0.464 ipTM=0.132 tol=1.98
2024-12-09 21:38:24,684 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=77.4 pTM=0.461 ipTM=0.128 tol=2.69
2024-12-09 21:38:54,003 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=77.3 pTM=0.461 ipTM=0.13 tol=3.09
2024-12-09 21:39:23,307 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=77.4 pTM=0.458 ipTM=0.129 tol=2.52
2024-12-09 21:39:52,631 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=77.4 pTM=0.459 ipTM=0.132 tol=1.98
2024-12-09 21:40:21,952 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.3 pTM=0.459 ipTM=0.128 tol=4.15
2024-12-09 21:40:51,280 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77.4 pTM=0.46 ipTM=0.132 tol=3.29
2024-12-09 21:41:20,627 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.5 pTM=0.459 ipTM=0.132 tol=1.49
2024-12-09 21:41:49,947 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.5 pTM=0.457 ipTM=0.133 tol=1.91
2024-12-09 21:42:19,264 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=77.2 pTM=0.454 ipTM=0.134 tol=2.21
2024-12-09 21:42:19,265 alphafold2_multimer_v3_model_2_seed_000 took 908.8s (30 recycles)
2024-12-09 21:42:49,266 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.9 pTM=0.463 ipTM=0.131
2024-12-09 21:43:18,502 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=77.1 pTM=0.476 ipTM=0.137 tol=10.1
2024-12-09 21:43:47,751 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.9 pTM=0.478 ipTM=0.131 tol=7.75
2024-12-09 21:44:17,001 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.1 pTM=0.478 ipTM=0.131 tol=2.63
2024-12-09 21:44:46,279 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=77.4 pTM=0.479 ipTM=0.137 tol=4.61
2024-12-09 21:45:15,576 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.2 pTM=0.477 ipTM=0.138 tol=2.68
2024-12-09 21:45:44,870 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=77.2 pTM=0.478 ipTM=0.14 tol=6.07
2024-12-09 21:46:14,160 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.4 pTM=0.479 ipTM=0.137 tol=4.11
2024-12-09 21:46:43,449 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.4 pTM=0.478 ipTM=0.143 tol=7
2024-12-09 21:47:12,738 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.3 pTM=0.478 ipTM=0.143 tol=2.3
2024-12-09 21:47:42,016 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.2 pTM=0.477 ipTM=0.143 tol=1.52
2024-12-09 21:48:11,307 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.3 pTM=0.479 ipTM=0.146 tol=4.01
2024-12-09 21:48:40,596 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.1 pTM=0.475 ipTM=0.144 tol=3.89
2024-12-09 21:49:09,911 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.1 pTM=0.481 ipTM=0.144 tol=3.77
2024-12-09 21:49:39,225 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.1 pTM=0.48 ipTM=0.146 tol=3.48
2024-12-09 21:50:08,520 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.3 pTM=0.476 ipTM=0.144 tol=6.19
2024-12-09 21:50:37,808 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.3 pTM=0.478 ipTM=0.142 tol=0.966
2024-12-09 21:51:07,101 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.7 pTM=0.477 ipTM=0.143 tol=4.95
2024-12-09 21:51:36,389 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.9 pTM=0.474 ipTM=0.143 tol=4.28
2024-12-09 21:52:05,692 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.2 pTM=0.477 ipTM=0.143 tol=3.53
2024-12-09 21:52:35,008 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.1 pTM=0.476 ipTM=0.141 tol=5.12
2024-12-09 21:53:04,303 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.3 pTM=0.477 ipTM=0.139 tol=2.63
2024-12-09 21:53:33,594 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.2 pTM=0.477 ipTM=0.139 tol=3
2024-12-09 21:54:02,870 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.4 pTM=0.479 ipTM=0.141 tol=3.01
2024-12-09 21:54:32,144 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.2 pTM=0.476 ipTM=0.147 tol=5.57
2024-12-09 21:55:01,431 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.2 pTM=0.477 ipTM=0.144 tol=2.88
2024-12-09 21:55:30,698 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.2 pTM=0.476 ipTM=0.141 tol=5.78
2024-12-09 21:55:59,985 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.1 pTM=0.474 ipTM=0.144 tol=2.35
2024-12-09 21:56:29,281 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.2 pTM=0.476 ipTM=0.142 tol=2.32
2024-12-09 21:56:58,564 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.1 pTM=0.474 ipTM=0.144 tol=1.03
2024-12-09 21:57:27,854 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.4 pTM=0.476 ipTM=0.144 tol=4.52
2024-12-09 21:57:27,855 alphafold2_multimer_v3_model_3_seed_000 took 907.8s (30 recycles)
2024-12-09 21:57:57,880 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.1 pTM=0.465 ipTM=0.133
2024-12-09 21:58:27,181 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.5 pTM=0.469 ipTM=0.131 tol=13.5
2024-12-09 21:58:56,492 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75.8 pTM=0.484 ipTM=0.13 tol=7.56
2024-12-09 21:59:25,794 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.7 pTM=0.486 ipTM=0.147 tol=32.8
2024-12-09 21:59:55,091 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.2 pTM=0.486 ipTM=0.157 tol=8.79
2024-12-09 22:00:24,372 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.2 pTM=0.485 ipTM=0.161 tol=4.98
2024-12-09 22:00:53,643 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.2 pTM=0.486 ipTM=0.161 tol=5.02
2024-12-09 22:01:22,910 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.3 pTM=0.487 ipTM=0.162 tol=2.31
2024-12-09 22:01:52,159 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.2 pTM=0.483 ipTM=0.162 tol=1.85
2024-12-09 22:02:21,422 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75 pTM=0.483 ipTM=0.163 tol=1.29
2024-12-09 22:02:50,701 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=75.2 pTM=0.481 ipTM=0.162 tol=2.6
2024-12-09 22:03:19,975 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.8 pTM=0.491 ipTM=0.165 tol=2.68
2024-12-09 22:03:49,268 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.2 pTM=0.483 ipTM=0.165 tol=2.39
2024-12-09 22:04:18,528 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=75.1 pTM=0.487 ipTM=0.164 tol=3.05
2024-12-09 22:04:47,794 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.2 pTM=0.484 ipTM=0.164 tol=2.53
2024-12-09 22:05:17,072 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.4 pTM=0.482 ipTM=0.164 tol=4
2024-12-09 22:05:46,344 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=75.5 pTM=0.483 ipTM=0.164 tol=1.83
2024-12-09 22:06:15,605 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.2 pTM=0.485 ipTM=0.163 tol=1.55
2024-12-09 22:06:44,887 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.1 pTM=0.48 ipTM=0.163 tol=1.62
2024-12-09 22:07:14,201 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.2 pTM=0.479 ipTM=0.161 tol=4.66
2024-12-09 22:07:43,518 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75.2 pTM=0.483 ipTM=0.162 tol=2.11
2024-12-09 22:08:12,815 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.4 pTM=0.484 ipTM=0.164 tol=1.69
2024-12-09 22:08:42,094 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.5 pTM=0.489 ipTM=0.164 tol=1.85
2024-12-09 22:09:11,377 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.2 pTM=0.489 ipTM=0.167 tol=3
2024-12-09 22:09:40,675 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.2 pTM=0.484 ipTM=0.166 tol=3.1
2024-12-09 22:10:09,952 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.2 pTM=0.484 ipTM=0.164 tol=2.51
2024-12-09 22:10:39,242 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.2 pTM=0.482 ipTM=0.164 tol=1.62
2024-12-09 22:11:08,536 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75.2 pTM=0.484 ipTM=0.163 tol=1.86
2024-12-09 22:11:37,835 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.4 pTM=0.483 ipTM=0.164 tol=1.96
2024-12-09 22:12:07,111 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=75.4 pTM=0.485 ipTM=0.165 tol=2.04
2024-12-09 22:12:36,378 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.4 pTM=0.481 ipTM=0.165 tol=1.85
2024-12-09 22:12:36,379 alphafold2_multimer_v3_model_4_seed_000 took 907.8s (30 recycles)
2024-12-09 22:13:06,356 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.1 pTM=0.463 ipTM=0.146
2024-12-09 22:13:35,672 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.8 pTM=0.466 ipTM=0.148 tol=12.7
2024-12-09 22:14:04,991 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.9 pTM=0.471 ipTM=0.132 tol=9.71
2024-12-09 22:14:34,317 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.4 pTM=0.48 ipTM=0.136 tol=6.17
2024-12-09 22:15:03,650 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.8 pTM=0.482 ipTM=0.135 tol=2.92
2024-12-09 22:15:32,998 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.7 pTM=0.482 ipTM=0.134 tol=3.12
2024-12-09 22:16:02,318 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.9 pTM=0.482 ipTM=0.131 tol=2.71
2024-12-09 22:16:31,662 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.1 pTM=0.486 ipTM=0.133 tol=2.85
2024-12-09 22:17:00,987 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.2 pTM=0.481 ipTM=0.129 tol=6.23
2024-12-09 22:17:30,291 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.9 pTM=0.48 ipTM=0.13 tol=4.57
2024-12-09 22:17:59,583 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.8 pTM=0.477 ipTM=0.133 tol=3.31
2024-12-09 22:18:28,870 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=76.4 pTM=0.49 ipTM=0.13 tol=3.6
2024-12-09 22:18:58,174 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.2 pTM=0.482 ipTM=0.13 tol=3.76
2024-12-09 22:19:27,468 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.2 pTM=0.486 ipTM=0.132 tol=2.76
2024-12-09 22:19:56,780 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.1 pTM=0.485 ipTM=0.133 tol=2.61
2024-12-09 22:20:26,124 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.3 pTM=0.487 ipTM=0.135 tol=4.54
2024-12-09 22:20:55,455 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.4 pTM=0.485 ipTM=0.132 tol=4.53
2024-12-09 22:21:24,761 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.1 pTM=0.483 ipTM=0.133 tol=2.38
2024-12-09 22:21:54,066 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76.1 pTM=0.479 ipTM=0.131 tol=1.61
2024-12-09 22:22:23,369 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.3 pTM=0.484 ipTM=0.131 tol=2.51
2024-12-09 22:22:52,651 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=76.1 pTM=0.481 ipTM=0.132 tol=2.36
2024-12-09 22:23:21,949 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.4 pTM=0.487 ipTM=0.134 tol=2.29
2024-12-09 22:23:51,229 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=76.1 pTM=0.484 ipTM=0.132 tol=2.72
2024-12-09 22:24:20,521 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.9 pTM=0.489 ipTM=0.135 tol=2.55
2024-12-09 22:24:49,833 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.9 pTM=0.481 ipTM=0.134 tol=2.59
2024-12-09 22:25:19,129 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.2 pTM=0.484 ipTM=0.133 tol=1.93
2024-12-09 22:25:48,402 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.9 pTM=0.479 ipTM=0.133 tol=2.26
2024-12-09 22:26:17,689 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.1 pTM=0.482 ipTM=0.134 tol=2.22
2024-12-09 22:26:46,958 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.2 pTM=0.48 ipTM=0.13 tol=2.68
2024-12-09 22:27:16,237 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.2 pTM=0.481 ipTM=0.132 tol=1.11
2024-12-09 22:27:45,549 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.2 pTM=0.479 ipTM=0.131 tol=3.49
2024-12-09 22:27:45,550 alphafold2_multimer_v3_model_5_seed_000 took 908.4s (30 recycles)
2024-12-09 22:27:46,308 reranking models by 'multimer' metric
2024-12-09 22:27:49,716 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 22:29:20,449 Relaxation took 94.1s
2024-12-09 22:29:20,449 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.4 pTM=0.481 ipTM=0.165
2024-12-09 22:30:39,095 Relaxation took 78.6s
2024-12-09 22:30:39,095 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.4 pTM=0.476 ipTM=0.144
2024-12-09 22:31:18,221 Relaxation took 39.1s
2024-12-09 22:31:18,221 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.2 pTM=0.479 ipTM=0.131
2024-12-09 22:32:47,423 Relaxation took 89.2s
2024-12-09 22:32:47,424 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=77.2 pTM=0.454 ipTM=0.134
2024-12-09 22:34:58,420 Relaxation took 131.0s
2024-12-09 22:34:58,420 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=76.9 pTM=0.456 ipTM=0.131
2024-12-09 22:35:00,606 Done