2024-12-09 21:54:00,363 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 21:54:00,694 Running on GPU
2024-12-09 21:54:05,156 Found 6 citations for tools or databases
2024-12-09 21:54:05,156 Query 1/1: WDR12_RPL3 (length 826)
2024-12-09 21:54:05,488 Sleeping for 5s. Reason: PENDING
2024-12-09 21:54:10,741 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:54:17,997 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:54:26,258 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:54:36,519 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:54:43,773 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:54:50,037 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:54:59,302 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:55:07,565 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:55:12,818 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:55:23,085 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:55:32,343 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:55:41,604 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:55:48,859 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:55:56,114 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:56:06,379 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:56:14,640 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:56:21,904 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:56:32,157 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:56:40,409 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:56:53,020 Sleeping for 9s. Reason: PENDING
2024-12-09 21:57:02,274 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:57:10,538 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:57:19,795 Sleeping for 9s. Reason: RUNNING
2024-12-09 21:57:29,053 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:57:39,320 Sleeping for 7s. Reason: RUNNING
2024-12-09 21:57:46,573 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:57:52,829 Sleeping for 6s. Reason: RUNNING
2024-12-09 21:57:59,090 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:58:04,342 Sleeping for 5s. Reason: RUNNING
2024-12-09 21:58:09,597 Sleeping for 10s. Reason: RUNNING
2024-12-09 21:58:19,852 Sleeping for 8s. Reason: RUNNING
2024-12-09 21:58:31,105 Setting max_seq=508, max_extra_seq=2048
2024-12-09 22:01:14,192 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=81.1 pTM=0.635 ipTM=0.491
2024-12-09 22:01:27,903 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=83.2 pTM=0.699 ipTM=0.582 tol=3.35
2024-12-09 22:01:41,683 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=84.9 pTM=0.539 ipTM=0.191 tol=2.55
2024-12-09 22:01:55,485 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=84.6 pTM=0.532 ipTM=0.181 tol=1.66
2024-12-09 22:02:09,325 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=85.2 pTM=0.532 ipTM=0.184 tol=0.971
2024-12-09 22:02:23,175 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=84.9 pTM=0.544 ipTM=0.207 tol=1.15
2024-12-09 22:02:37,059 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=85.1 pTM=0.533 ipTM=0.183 tol=0.832
2024-12-09 22:02:50,947 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=84.8 pTM=0.526 ipTM=0.162 tol=1.48
2024-12-09 22:03:04,849 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=85.1 pTM=0.541 ipTM=0.198 tol=1.47
2024-12-09 22:03:18,771 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=85.4 pTM=0.534 ipTM=0.186 tol=2.64
2024-12-09 22:03:32,688 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=83.4 pTM=0.715 ipTM=0.612 tol=2.27
2024-12-09 22:03:46,641 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=85.1 pTM=0.517 ipTM=0.15 tol=3.21
2024-12-09 22:04:00,567 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=84.8 pTM=0.533 ipTM=0.179 tol=2.2
2024-12-09 22:04:14,495 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=85.2 pTM=0.538 ipTM=0.209 tol=1.97
2024-12-09 22:04:28,424 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=84.6 pTM=0.542 ipTM=0.243 tol=0.702
2024-12-09 22:04:42,346 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=83.8 pTM=0.711 ipTM=0.601 tol=2.47
2024-12-09 22:04:56,341 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=85.2 pTM=0.525 ipTM=0.154 tol=2.83
2024-12-09 22:05:10,299 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=84.9 pTM=0.526 ipTM=0.162 tol=1.72
2024-12-09 22:05:24,281 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=85.6 pTM=0.521 ipTM=0.158 tol=0.852
2024-12-09 22:05:38,266 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=85.1 pTM=0.521 ipTM=0.155 tol=1.51
2024-12-09 22:05:52,237 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=85.5 pTM=0.524 ipTM=0.166 tol=1.85
2024-12-09 22:06:06,222 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=85 pTM=0.522 ipTM=0.157 tol=1.5
2024-12-09 22:06:20,187 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=85.2 pTM=0.528 ipTM=0.184 tol=1.71
2024-12-09 22:06:34,156 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=85.3 pTM=0.528 ipTM=0.175 tol=0.986
2024-12-09 22:06:48,127 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=85.2 pTM=0.525 ipTM=0.164 tol=1
2024-12-09 22:07:02,114 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=85.1 pTM=0.527 ipTM=0.165 tol=1.14
2024-12-09 22:07:16,088 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=85.6 pTM=0.535 ipTM=0.18 tol=1.51
2024-12-09 22:07:30,047 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=85.5 pTM=0.531 ipTM=0.178 tol=1.49
2024-12-09 22:07:44,012 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=85 pTM=0.527 ipTM=0.182 tol=1.08
2024-12-09 22:07:57,968 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=85.4 pTM=0.536 ipTM=0.201 tol=1.57
2024-12-09 22:08:11,937 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=85.1 pTM=0.538 ipTM=0.2 tol=1.28
2024-12-09 22:08:11,937 alphafold2_multimer_v3_model_1_seed_000 took 575.8s (30 recycles)
2024-12-09 22:08:26,242 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.3 pTM=0.495 ipTM=0.183
2024-12-09 22:08:40,162 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=82.1 pTM=0.519 ipTM=0.157 tol=4.89
2024-12-09 22:08:54,118 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=83 pTM=0.517 ipTM=0.144 tol=2.35
2024-12-09 22:09:08,049 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=84.4 pTM=0.538 ipTM=0.183 tol=4.18
2024-12-09 22:09:21,982 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=84.4 pTM=0.527 ipTM=0.161 tol=1.87
2024-12-09 22:09:35,908 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=84.6 pTM=0.533 ipTM=0.159 tol=1.22
2024-12-09 22:09:49,847 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=84.9 pTM=0.53 ipTM=0.159 tol=1.56
2024-12-09 22:10:03,795 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=84.8 pTM=0.533 ipTM=0.159 tol=0.594
2024-12-09 22:10:17,747 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=84.5 pTM=0.532 ipTM=0.157 tol=0.538
2024-12-09 22:10:31,683 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=84.7 pTM=0.535 ipTM=0.171 tol=0.663
2024-12-09 22:10:45,630 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=84.8 pTM=0.529 ipTM=0.15 tol=1.49
2024-12-09 22:10:59,562 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=84.8 pTM=0.532 ipTM=0.168 tol=1.72
2024-12-09 22:11:13,498 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=84.9 pTM=0.534 ipTM=0.166 tol=1.07
2024-12-09 22:11:27,431 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=84.9 pTM=0.529 ipTM=0.162 tol=1.13
2024-12-09 22:11:41,367 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=84.4 pTM=0.523 ipTM=0.141 tol=1.37
2024-12-09 22:11:55,298 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=84.5 pTM=0.528 ipTM=0.165 tol=0.713
2024-12-09 22:12:09,230 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=84.6 pTM=0.534 ipTM=0.161 tol=1.74
2024-12-09 22:12:23,163 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=84.9 pTM=0.53 ipTM=0.161 tol=0.949
2024-12-09 22:12:37,111 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=84.7 pTM=0.524 ipTM=0.139 tol=1.3
2024-12-09 22:12:51,033 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=84.8 pTM=0.529 ipTM=0.163 tol=1.17
2024-12-09 22:13:04,973 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=84.6 pTM=0.525 ipTM=0.146 tol=1.04
2024-12-09 22:13:18,912 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=84.9 pTM=0.532 ipTM=0.158 tol=0.668
2024-12-09 22:13:32,845 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=84.8 pTM=0.528 ipTM=0.146 tol=0.512
2024-12-09 22:13:46,784 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=84.7 pTM=0.529 ipTM=0.151 tol=0.845
2024-12-09 22:14:00,722 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=84.8 pTM=0.531 ipTM=0.154 tol=1.67
2024-12-09 22:14:14,666 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=84.7 pTM=0.525 ipTM=0.142 tol=2.1
2024-12-09 22:14:28,605 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=84.6 pTM=0.53 ipTM=0.152 tol=1.26
2024-12-09 22:14:42,543 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=84.8 pTM=0.526 ipTM=0.146 tol=0.824
2024-12-09 22:14:56,480 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=84.7 pTM=0.529 ipTM=0.148 tol=0.574
2024-12-09 22:15:10,423 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=84.8 pTM=0.528 ipTM=0.147 tol=0.681
2024-12-09 22:15:24,368 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=84.8 pTM=0.531 ipTM=0.152 tol=0.628
2024-12-09 22:15:24,369 alphafold2_multimer_v3_model_2_seed_000 took 432.0s (30 recycles)
2024-12-09 22:15:38,716 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=81.2 pTM=0.508 ipTM=0.151
2024-12-09 22:15:52,674 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=83.8 pTM=0.511 ipTM=0.139 tol=3.24
2024-12-09 22:16:06,635 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=84.4 pTM=0.516 ipTM=0.14 tol=2.27
2024-12-09 22:16:20,584 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=84.9 pTM=0.519 ipTM=0.15 tol=2.45
2024-12-09 22:16:34,518 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=84.8 pTM=0.524 ipTM=0.154 tol=0.836
2024-12-09 22:16:48,479 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=85.4 pTM=0.519 ipTM=0.141 tol=4.92
2024-12-09 22:17:02,436 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=85.2 pTM=0.526 ipTM=0.151 tol=5.16
2024-12-09 22:17:16,422 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=85.4 pTM=0.52 ipTM=0.14 tol=9.99
2024-12-09 22:17:30,363 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=84.8 pTM=0.522 ipTM=0.147 tol=8.34
2024-12-09 22:17:44,321 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=84.9 pTM=0.516 ipTM=0.137 tol=3.69
2024-12-09 22:17:58,253 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=85.1 pTM=0.525 ipTM=0.15 tol=4.22
2024-12-09 22:18:12,203 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=85.2 pTM=0.517 ipTM=0.139 tol=4.98
2024-12-09 22:18:26,141 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=85.2 pTM=0.523 ipTM=0.145 tol=4.8
2024-12-09 22:18:40,098 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=84.9 pTM=0.517 ipTM=0.137 tol=3.55
2024-12-09 22:18:54,049 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=84.9 pTM=0.515 ipTM=0.135 tol=2.36
2024-12-09 22:19:07,977 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=84.9 pTM=0.52 ipTM=0.141 tol=5.92
2024-12-09 22:19:21,961 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=85.2 pTM=0.517 ipTM=0.135 tol=11.1
2024-12-09 22:19:35,861 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=84.9 pTM=0.521 ipTM=0.149 tol=12.2
2024-12-09 22:19:49,822 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=85.1 pTM=0.514 ipTM=0.135 tol=12.4
2024-12-09 22:20:03,781 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=85.1 pTM=0.52 ipTM=0.139 tol=9.2
2024-12-09 22:20:17,758 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=84.9 pTM=0.515 ipTM=0.134 tol=7.73
2024-12-09 22:20:31,721 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=84.7 pTM=0.516 ipTM=0.139 tol=7.48
2024-12-09 22:20:45,680 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=84.9 pTM=0.517 ipTM=0.136 tol=1.45
2024-12-09 22:20:59,627 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=84.9 pTM=0.517 ipTM=0.137 tol=1.82
2024-12-09 22:21:13,574 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=84.9 pTM=0.516 ipTM=0.135 tol=1.63
2024-12-09 22:21:27,527 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=84.9 pTM=0.514 ipTM=0.135 tol=2.48
2024-12-09 22:21:41,478 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=85.2 pTM=0.519 ipTM=0.136 tol=1.75
2024-12-09 22:21:55,424 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=85 pTM=0.518 ipTM=0.138 tol=2.33
2024-12-09 22:22:09,371 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=85 pTM=0.516 ipTM=0.136 tol=1.85
2024-12-09 22:22:23,283 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=85.1 pTM=0.526 ipTM=0.151 tol=5.71
2024-12-09 22:22:37,243 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=85.2 pTM=0.519 ipTM=0.139 tol=10.9
2024-12-09 22:22:37,244 alphafold2_multimer_v3_model_3_seed_000 took 432.4s (30 recycles)
2024-12-09 22:22:51,619 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=81.8 pTM=0.494 ipTM=0.127
2024-12-09 22:23:05,534 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=83.3 pTM=0.541 ipTM=0.229 tol=5.37
2024-12-09 22:23:19,466 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=84.1 pTM=0.533 ipTM=0.166 tol=1.65
2024-12-09 22:23:33,404 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=84.5 pTM=0.539 ipTM=0.186 tol=2.29
2024-12-09 22:23:47,361 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=83.9 pTM=0.529 ipTM=0.157 tol=1.78
2024-12-09 22:24:01,319 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=84 pTM=0.532 ipTM=0.161 tol=0.982
2024-12-09 22:24:15,271 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83.9 pTM=0.535 ipTM=0.166 tol=1.17
2024-12-09 22:24:29,245 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=83.9 pTM=0.527 ipTM=0.147 tol=2.27
2024-12-09 22:24:43,200 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=84.3 pTM=0.531 ipTM=0.152 tol=1.01
2024-12-09 22:24:57,149 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=84.1 pTM=0.529 ipTM=0.149 tol=1.18
2024-12-09 22:25:11,132 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=84.3 pTM=0.525 ipTM=0.143 tol=2.6
2024-12-09 22:25:25,115 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=84.2 pTM=0.524 ipTM=0.138 tol=1.94
2024-12-09 22:25:39,117 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=84.5 pTM=0.525 ipTM=0.138 tol=2.54
2024-12-09 22:25:53,101 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=84.1 pTM=0.52 ipTM=0.13 tol=2.16
2024-12-09 22:26:07,101 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=83.6 pTM=0.523 ipTM=0.135 tol=11.2
2024-12-09 22:26:21,095 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=84.6 pTM=0.528 ipTM=0.145 tol=3.06
2024-12-09 22:26:35,099 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=84.1 pTM=0.526 ipTM=0.138 tol=2.96
2024-12-09 22:26:49,002 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=85.1 pTM=0.583 ipTM=0.308 tol=10.7
2024-12-09 22:27:02,900 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=85.2 pTM=0.599 ipTM=0.357 tol=0.665
2024-12-09 22:27:16,822 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=85.2 pTM=0.552 ipTM=0.216 tol=1.68
2024-12-09 22:27:30,803 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=84.6 pTM=0.528 ipTM=0.147 tol=2.54
2024-12-09 22:27:44,737 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=85.1 pTM=0.551 ipTM=0.213 tol=2.41
2024-12-09 22:27:58,703 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=85 pTM=0.532 ipTM=0.155 tol=2.22
2024-12-09 22:28:12,711 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=84.8 pTM=0.529 ipTM=0.151 tol=4.33
2024-12-09 22:28:26,679 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=84.8 pTM=0.528 ipTM=0.151 tol=3.56
2024-12-09 22:28:40,663 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=84.8 pTM=0.528 ipTM=0.151 tol=0.941
2024-12-09 22:28:54,650 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=85 pTM=0.535 ipTM=0.157 tol=1.53
2024-12-09 22:29:08,649 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=84.8 pTM=0.527 ipTM=0.15 tol=4.35
2024-12-09 22:29:22,598 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=85 pTM=0.545 ipTM=0.186 tol=5.11
2024-12-09 22:29:36,572 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=84.6 pTM=0.534 ipTM=0.159 tol=0.811
2024-12-09 22:29:50,585 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=84.8 pTM=0.532 ipTM=0.154 tol=3.69
2024-12-09 22:29:50,586 alphafold2_multimer_v3_model_4_seed_000 took 432.9s (30 recycles)
2024-12-09 22:30:04,958 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=80.1 pTM=0.501 ipTM=0.145
2024-12-09 22:30:18,993 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=83.4 pTM=0.519 ipTM=0.144 tol=11
2024-12-09 22:30:32,995 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=84.1 pTM=0.524 ipTM=0.146 tol=15
2024-12-09 22:30:47,018 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=84.6 pTM=0.527 ipTM=0.145 tol=14.7
2024-12-09 22:31:01,040 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=84.6 pTM=0.527 ipTM=0.145 tol=13
2024-12-09 22:31:15,058 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=84.6 pTM=0.528 ipTM=0.144 tol=11.7
2024-12-09 22:31:29,083 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=84.6 pTM=0.525 ipTM=0.138 tol=4.01
2024-12-09 22:31:43,119 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=84.7 pTM=0.524 ipTM=0.139 tol=1.04
2024-12-09 22:31:57,089 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=84.6 pTM=0.539 ipTM=0.184 tol=9.94
2024-12-09 22:32:11,055 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=84.6 pTM=0.544 ipTM=0.194 tol=0.75
2024-12-09 22:32:25,053 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=84.8 pTM=0.53 ipTM=0.153 tol=3.21
2024-12-09 22:32:39,026 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=84.1 pTM=0.536 ipTM=0.163 tol=15.7
2024-12-09 22:32:53,017 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=84.6 pTM=0.535 ipTM=0.157 tol=1.9
2024-12-09 22:33:07,045 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=84.2 pTM=0.525 ipTM=0.14 tol=10
2024-12-09 22:33:21,004 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=84.9 pTM=0.548 ipTM=0.251 tol=12.1
2024-12-09 22:33:34,949 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=84.9 pTM=0.55 ipTM=0.236 tol=1.06
2024-12-09 22:33:48,984 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=84.6 pTM=0.528 ipTM=0.142 tol=14.4
2024-12-09 22:34:02,995 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=84.3 pTM=0.524 ipTM=0.14 tol=1.67
2024-12-09 22:34:16,928 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=85.2 pTM=0.579 ipTM=0.371 tol=16.2
2024-12-09 22:34:30,851 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=85.8 pTM=0.617 ipTM=0.415 tol=1.17
2024-12-09 22:34:44,767 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=85.6 pTM=0.62 ipTM=0.422 tol=0.188
2024-12-09 22:34:44,767 alphafold2_multimer_v3_model_5_seed_000 took 293.7s (20 recycles)
2024-12-09 22:34:45,203 reranking models by 'multimer' metric
2024-12-09 22:34:46,336 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-09 22:35:14,015 Relaxation took 28.8s
2024-12-09 22:35:14,015 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=85.6 pTM=0.62 ipTM=0.422
2024-12-09 22:35:41,160 Relaxation took 27.1s
2024-12-09 22:35:41,160 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=85.1 pTM=0.538 ipTM=0.2
2024-12-09 22:36:06,711 Relaxation took 25.5s
2024-12-09 22:36:06,712 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=84.8 pTM=0.532 ipTM=0.154
2024-12-09 22:37:05,381 Relaxation took 58.7s
2024-12-09 22:37:05,382 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=84.8 pTM=0.531 ipTM=0.152
2024-12-09 22:38:10,070 Relaxation took 64.7s
2024-12-09 22:38:10,071 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=85.2 pTM=0.519 ipTM=0.139
2024-12-09 22:38:11,700 Done