2024-12-09 22:10:12,032 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 22:10:12,353 Running on GPU
2024-12-09 22:10:16,013 Found 6 citations for tools or databases
2024-12-09 22:10:16,013 Query 1/1: WDR59_NUP54 (length 1481)
2024-12-09 22:10:16,322 Sleeping for 5s. Reason: PENDING
2024-12-09 22:10:21,584 Sleeping for 10s. Reason: PENDING
2024-12-09 22:10:31,844 Sleeping for 9s. Reason: PENDING
2024-12-09 22:10:41,098 Sleeping for 6s. Reason: PENDING
2024-12-09 22:10:47,355 Sleeping for 7s. Reason: PENDING
2024-12-09 22:10:54,762 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:11:04,020 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:11:11,291 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:11:21,551 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:11:28,810 Sleeping for 8s. Reason: RUNNING
2024-12-09 22:11:37,065 Sleeping for 5s. Reason: RUNNING
2024-12-09 22:11:42,320 Sleeping for 5s. Reason: RUNNING
2024-12-09 22:11:47,573 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:11:53,824 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:12:03,080 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:12:10,343 Sleeping for 5s. Reason: RUNNING
2024-12-09 22:12:15,595 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:12:21,850 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:12:32,113 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:12:39,387 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:12:48,650 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:12:57,905 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:13:08,166 Sleeping for 8s. Reason: RUNNING
2024-12-09 22:13:16,422 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:13:22,681 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:13:29,938 Sleeping for 5s. Reason: RUNNING
2024-12-09 22:13:35,192 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:13:45,450 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:13:52,705 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:14:02,968 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:14:10,233 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:14:17,635 Sleeping for 6s. Reason: PENDING
2024-12-09 22:14:23,894 Sleeping for 10s. Reason: PENDING
2024-12-09 22:14:34,154 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:14:40,414 Sleeping for 8s. Reason: RUNNING
2024-12-09 22:14:48,682 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:14:57,942 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:15:05,211 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:15:12,473 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:15:21,733 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:15:28,989 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:15:39,256 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:15:45,508 Sleeping for 9s. Reason: RUNNING
2024-12-09 22:15:54,763 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:16:05,028 Sleeping for 8s. Reason: RUNNING
2024-12-09 22:16:13,291 Sleeping for 5s. Reason: RUNNING
2024-12-09 22:16:18,548 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:16:24,801 Sleeping for 10s. Reason: RUNNING
2024-12-09 22:16:35,061 Sleeping for 7s. Reason: RUNNING
2024-12-09 22:16:42,318 Sleeping for 6s. Reason: RUNNING
2024-12-09 22:16:48,572 Sleeping for 5s. Reason: RUNNING
2024-12-09 22:16:53,825 Sleeping for 8s. Reason: RUNNING
2024-12-09 22:17:04,905 Setting max_seq=508, max_extra_seq=2048
2024-12-09 22:20:59,711 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.1 pTM=0.331 ipTM=0.215
2024-12-09 22:22:03,331 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.6 pTM=0.34 ipTM=0.204 tol=12.3
2024-12-09 22:23:07,047 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.7 pTM=0.341 ipTM=0.204 tol=4.93
2024-12-09 22:24:10,815 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.5 pTM=0.338 ipTM=0.188 tol=5.12
2024-12-09 22:25:14,590 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.9 pTM=0.341 ipTM=0.213 tol=2.17
2024-12-09 22:26:18,401 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.8 pTM=0.339 ipTM=0.208 tol=3.12
2024-12-09 22:27:22,262 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.5 pTM=0.335 ipTM=0.182 tol=2.89
2024-12-09 22:28:26,103 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.2 pTM=0.336 ipTM=0.181 tol=4.2
2024-12-09 22:29:30,017 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.5 pTM=0.335 ipTM=0.177 tol=2.64
2024-12-09 22:30:33,903 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.4 pTM=0.335 ipTM=0.176 tol=2.71
2024-12-09 22:31:37,791 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.2 pTM=0.335 ipTM=0.176 tol=1.49
2024-12-09 22:32:41,642 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.4 pTM=0.336 ipTM=0.176 tol=1.76
2024-12-09 22:33:45,474 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.4 pTM=0.335 ipTM=0.174 tol=1.8
2024-12-09 22:34:49,303 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.3 pTM=0.335 ipTM=0.177 tol=1.91
2024-12-09 22:35:53,148 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.2 pTM=0.334 ipTM=0.179 tol=1.81
2024-12-09 22:36:57,006 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.4 pTM=0.335 ipTM=0.181 tol=1.73
2024-12-09 22:38:00,843 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.5 pTM=0.335 ipTM=0.178 tol=2.41
2024-12-09 22:39:04,703 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.7 pTM=0.336 ipTM=0.18 tol=2.37
2024-12-09 22:40:08,556 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.8 pTM=0.336 ipTM=0.185 tol=1.95
2024-12-09 22:41:12,412 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.6 pTM=0.336 ipTM=0.184 tol=1.62
2024-12-09 22:42:16,314 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.7 pTM=0.337 ipTM=0.183 tol=2.21
2024-12-09 22:43:20,185 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.8 pTM=0.337 ipTM=0.191 tol=1.95
2024-12-09 22:44:24,069 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.8 pTM=0.337 ipTM=0.192 tol=2.47
2024-12-09 22:45:27,987 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.9 pTM=0.337 ipTM=0.2 tol=2.1
2024-12-09 22:46:31,881 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.2 pTM=0.342 ipTM=0.23 tol=3
2024-12-09 22:47:35,730 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.2 pTM=0.342 ipTM=0.239 tol=2.14
2024-12-09 22:48:39,559 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.2 pTM=0.341 ipTM=0.236 tol=2.72
2024-12-09 22:49:43,419 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.2 pTM=0.342 ipTM=0.237 tol=2.36
2024-12-09 22:50:47,261 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.3 pTM=0.342 ipTM=0.233 tol=2.51
2024-12-09 22:51:51,074 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.3 pTM=0.342 ipTM=0.239 tol=2.14
2024-12-09 22:52:54,904 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.3 pTM=0.342 ipTM=0.232 tol=2.27
2024-12-09 22:52:54,905 alphafold2_multimer_v3_model_1_seed_000 took 2144.8s (30 recycles)
2024-12-09 22:54:00,048 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.8 pTM=0.347 ipTM=0.209
2024-12-09 22:55:03,847 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.2 pTM=0.355 ipTM=0.24 tol=11.5
2024-12-09 22:56:07,705 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.4 pTM=0.346 ipTM=0.204 tol=7.34
2024-12-09 22:57:11,636 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.6 pTM=0.34 ipTM=0.195 tol=7.55
2024-12-09 22:58:15,615 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64 pTM=0.342 ipTM=0.213 tol=5.05
2024-12-09 22:59:19,574 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.2 pTM=0.34 ipTM=0.192 tol=3.81
2024-12-09 23:00:23,518 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.2 pTM=0.339 ipTM=0.205 tol=3.5
2024-12-09 23:01:27,468 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64 pTM=0.338 ipTM=0.191 tol=2.89
2024-12-09 23:02:31,440 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.1 pTM=0.336 ipTM=0.186 tol=3.14
2024-12-09 23:03:35,472 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64 pTM=0.336 ipTM=0.194 tol=3
2024-12-09 23:04:39,491 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.9 pTM=0.335 ipTM=0.183 tol=2.87
2024-12-09 23:05:43,523 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.8 pTM=0.335 ipTM=0.204 tol=2.86
2024-12-09 23:06:47,535 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64 pTM=0.333 ipTM=0.178 tol=4.25
2024-12-09 23:07:51,592 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.8 pTM=0.333 ipTM=0.184 tol=4.87
2024-12-09 23:08:55,690 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.9 pTM=0.333 ipTM=0.176 tol=5.85
2024-12-09 23:09:59,782 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.8 pTM=0.335 ipTM=0.179 tol=5.8
2024-12-09 23:11:03,805 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.8 pTM=0.342 ipTM=0.243 tol=5.81
2024-12-09 23:12:07,813 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.1 pTM=0.341 ipTM=0.224 tol=4.79
2024-12-09 23:13:11,835 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.1 pTM=0.341 ipTM=0.203 tol=4.47
2024-12-09 23:14:15,849 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.6 pTM=0.341 ipTM=0.203 tol=3.39
2024-12-09 23:15:19,820 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.7 pTM=0.341 ipTM=0.205 tol=3.89
2024-12-09 23:16:23,752 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.1 pTM=0.34 ipTM=0.198 tol=3.02
2024-12-09 23:17:27,680 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.1 pTM=0.338 ipTM=0.191 tol=3.51
2024-12-09 23:18:31,668 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.5 pTM=0.337 ipTM=0.192 tol=10.2
2024-12-09 23:19:35,646 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.34 ipTM=0.201 tol=6.31
2024-12-09 23:20:39,602 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.9 pTM=0.34 ipTM=0.21 tol=5.51
2024-12-09 23:21:43,581 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.2 pTM=0.342 ipTM=0.214 tol=3.74
2024-12-09 23:22:47,572 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.9 pTM=0.343 ipTM=0.211 tol=2.65
2024-12-09 23:23:51,593 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65 pTM=0.341 ipTM=0.203 tol=3.54
2024-12-09 23:24:55,539 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.1 pTM=0.341 ipTM=0.213 tol=2.99
2024-12-09 23:25:59,502 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.342 ipTM=0.211 tol=2.14
2024-12-09 23:25:59,504 alphafold2_multimer_v3_model_2_seed_000 took 1983.3s (30 recycles)
2024-12-09 23:27:04,899 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63 pTM=0.335 ipTM=0.186
2024-12-09 23:28:08,902 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.6 pTM=0.342 ipTM=0.213 tol=15.1
2024-12-09 23:29:13,018 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.4 pTM=0.342 ipTM=0.195 tol=7.98
2024-12-09 23:30:17,102 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.5 pTM=0.344 ipTM=0.201 tol=9.13
2024-12-09 23:31:21,135 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.345 ipTM=0.197 tol=7.6
2024-12-09 23:32:25,147 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64 pTM=0.345 ipTM=0.197 tol=3.77
2024-12-09 23:33:29,128 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.3 pTM=0.345 ipTM=0.197 tol=3.17
2024-12-09 23:34:33,096 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.3 pTM=0.344 ipTM=0.191 tol=1.72
2024-12-09 23:35:37,081 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.8 pTM=0.347 ipTM=0.197 tol=1.69
2024-12-09 23:36:41,058 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.6 pTM=0.345 ipTM=0.191 tol=3.13
2024-12-09 23:37:45,047 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.6 pTM=0.347 ipTM=0.195 tol=2.77
2024-12-09 23:38:49,012 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.9 pTM=0.348 ipTM=0.2 tol=3.32
2024-12-09 23:39:52,990 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.345 ipTM=0.191 tol=3.25
2024-12-09 23:40:56,914 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.9 pTM=0.347 ipTM=0.199 tol=2.91
2024-12-09 23:42:00,822 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.6 pTM=0.345 ipTM=0.192 tol=1.84
2024-12-09 23:43:04,719 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.7 pTM=0.346 ipTM=0.195 tol=2.96
2024-12-09 23:44:08,661 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.8 pTM=0.346 ipTM=0.194 tol=1.35
2024-12-09 23:45:12,550 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.1 pTM=0.346 ipTM=0.193 tol=3.12
2024-12-09 23:46:16,410 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.1 pTM=0.346 ipTM=0.194 tol=1.86
2024-12-09 23:47:20,282 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.6 pTM=0.345 ipTM=0.193 tol=2.41
2024-12-09 23:48:24,156 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.8 pTM=0.347 ipTM=0.196 tol=2.29
2024-12-09 23:49:28,031 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.9 pTM=0.346 ipTM=0.194 tol=1.15
2024-12-09 23:50:32,002 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.9 pTM=0.344 ipTM=0.186 tol=2.9
2024-12-09 23:51:35,948 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.1 pTM=0.345 ipTM=0.193 tol=2.09
2024-12-09 23:52:39,892 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.1 pTM=0.348 ipTM=0.197 tol=1.6
2024-12-09 23:53:43,837 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.1 pTM=0.348 ipTM=0.199 tol=2.27
2024-12-09 23:54:47,786 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.1 pTM=0.346 ipTM=0.188 tol=2.86
2024-12-09 23:55:51,680 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.1 pTM=0.347 ipTM=0.194 tol=1.84
2024-12-09 23:56:55,616 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.9 pTM=0.347 ipTM=0.194 tol=2.32
2024-12-09 23:57:59,523 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.3 pTM=0.343 ipTM=0.188 tol=2.13
2024-12-09 23:59:03,407 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.9 pTM=0.347 ipTM=0.194 tol=2.02
2024-12-09 23:59:03,409 alphafold2_multimer_v3_model_3_seed_000 took 1982.6s (30 recycles)
2024-12-10 00:00:08,992 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59 pTM=0.328 ipTM=0.171
2024-12-10 00:01:13,230 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.5 pTM=0.333 ipTM=0.247 tol=14.4
2024-12-10 00:02:17,326 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.4 pTM=0.33 ipTM=0.17 tol=10.8
2024-12-10 00:03:21,375 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62 pTM=0.331 ipTM=0.174 tol=6.57
2024-12-10 00:04:25,365 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.6 pTM=0.332 ipTM=0.192 tol=3.8
2024-12-10 00:05:29,316 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.9 pTM=0.331 ipTM=0.186 tol=3.09
2024-12-10 00:06:33,236 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.2 pTM=0.332 ipTM=0.194 tol=3.05
2024-12-10 00:07:37,126 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.3 pTM=0.333 ipTM=0.223 tol=2.42
2024-12-10 00:08:41,045 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63.6 pTM=0.333 ipTM=0.227 tol=2.2
2024-12-10 00:09:44,995 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.5 pTM=0.332 ipTM=0.246 tol=2.18
2024-12-10 00:10:48,934 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.5 pTM=0.333 ipTM=0.235 tol=2.62
2024-12-10 00:11:52,852 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=63.7 pTM=0.333 ipTM=0.238 tol=3.34
2024-12-10 00:12:56,817 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.7 pTM=0.332 ipTM=0.226 tol=1.62
2024-12-10 00:14:00,794 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.5 pTM=0.333 ipTM=0.22 tol=2.19
2024-12-10 00:15:04,754 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.5 pTM=0.332 ipTM=0.217 tol=2.87
2024-12-10 00:16:08,715 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63 pTM=0.332 ipTM=0.213 tol=6.95
2024-12-10 00:17:12,709 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.3 pTM=0.332 ipTM=0.196 tol=6.77
2024-12-10 00:18:16,707 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.5 pTM=0.331 ipTM=0.188 tol=2.8
2024-12-10 00:19:20,685 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.7 pTM=0.331 ipTM=0.187 tol=2.29
2024-12-10 00:20:24,625 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.3 pTM=0.333 ipTM=0.189 tol=1.96
2024-12-10 00:21:28,616 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.5 pTM=0.333 ipTM=0.189 tol=2.23
2024-12-10 00:22:32,616 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.5 pTM=0.333 ipTM=0.191 tol=1.64
2024-12-10 00:23:36,633 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.3 pTM=0.332 ipTM=0.199 tol=2.32
2024-12-10 00:24:40,606 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.7 pTM=0.333 ipTM=0.22 tol=1.68
2024-12-10 00:25:44,595 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.4 pTM=0.333 ipTM=0.224 tol=2.06
2024-12-10 00:26:48,542 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.4 pTM=0.333 ipTM=0.229 tol=1.64
2024-12-10 00:27:52,507 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63.8 pTM=0.334 ipTM=0.229 tol=1.77
2024-12-10 00:28:56,451 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.4 pTM=0.334 ipTM=0.222 tol=1.8
2024-12-10 00:30:00,379 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.4 pTM=0.334 ipTM=0.219 tol=1.7
2024-12-10 00:31:04,335 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.4 pTM=0.333 ipTM=0.194 tol=1.65
2024-12-10 00:32:08,333 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63 pTM=0.333 ipTM=0.187 tol=1.5
2024-12-10 00:32:08,334 alphafold2_multimer_v3_model_4_seed_000 took 1983.6s (30 recycles)
2024-12-10 00:33:13,723 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.8 pTM=0.337 ipTM=0.234
2024-12-10 00:34:17,787 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.5 pTM=0.342 ipTM=0.201 tol=7.6
2024-12-10 00:35:21,887 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.2 pTM=0.342 ipTM=0.194 tol=8.42
2024-12-10 00:36:25,937 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.1 pTM=0.343 ipTM=0.192 tol=7.71
2024-12-10 00:37:29,980 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.5 pTM=0.345 ipTM=0.198 tol=5.43
2024-12-10 00:38:33,988 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.8 pTM=0.344 ipTM=0.192 tol=4.02
2024-12-10 00:39:37,992 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.9 pTM=0.344 ipTM=0.21 tol=3.63
2024-12-10 00:40:41,946 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.1 pTM=0.346 ipTM=0.212 tol=2.5
2024-12-10 00:41:45,924 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.4 pTM=0.346 ipTM=0.226 tol=2.1
2024-12-10 00:42:49,912 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.5 pTM=0.348 ipTM=0.274 tol=3.33
2024-12-10 00:43:53,872 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.6 pTM=0.352 ipTM=0.279 tol=2.3
2024-12-10 00:44:57,823 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.6 pTM=0.35 ipTM=0.273 tol=2.15
2024-12-10 00:46:01,789 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.6 pTM=0.352 ipTM=0.275 tol=1.67
2024-12-10 00:47:05,708 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.7 pTM=0.352 ipTM=0.277 tol=1.75
2024-12-10 00:48:09,624 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=64.9 pTM=0.354 ipTM=0.273 tol=2.75
2024-12-10 00:49:13,531 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.9 pTM=0.352 ipTM=0.256 tol=1.91
2024-12-10 00:50:17,507 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.9 pTM=0.353 ipTM=0.263 tol=1.87
2024-12-10 00:51:21,466 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.9 pTM=0.349 ipTM=0.219 tol=2.08
2024-12-10 00:52:25,412 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65 pTM=0.347 ipTM=0.234 tol=1.9
2024-12-10 00:53:29,294 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.8 pTM=0.351 ipTM=0.266 tol=1.82
2024-12-10 00:54:33,151 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.9 pTM=0.351 ipTM=0.26 tol=2.08
2024-12-10 00:55:37,068 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.9 pTM=0.349 ipTM=0.259 tol=1.45
2024-12-10 00:56:40,969 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.8 pTM=0.352 ipTM=0.262 tol=1.57
2024-12-10 00:57:44,806 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.8 pTM=0.35 ipTM=0.26 tol=0.968
2024-12-10 00:58:48,673 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.9 pTM=0.352 ipTM=0.27 tol=1.92
2024-12-10 00:59:52,582 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.6 pTM=0.349 ipTM=0.249 tol=2.79
2024-12-10 01:00:56,458 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.351 ipTM=0.27 tol=1.75
2024-12-10 01:02:00,347 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.8 pTM=0.351 ipTM=0.255 tol=2.13
2024-12-10 01:03:04,254 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.8 pTM=0.351 ipTM=0.264 tol=1.13
2024-12-10 01:04:08,152 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.1 pTM=0.354 ipTM=0.273 tol=1.92
2024-12-10 01:05:12,037 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.6 pTM=0.353 ipTM=0.278 tol=2.29
2024-12-10 01:05:12,038 alphafold2_multimer_v3_model_5_seed_000 took 1982.4s (30 recycles)
2024-12-10 01:05:13,333 reranking models by 'multimer' metric
2024-12-10 01:05:17,137 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 01:07:30,516 Relaxation took 137.2s
2024-12-10 01:07:30,516 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.6 pTM=0.353 ipTM=0.278
2024-12-10 01:10:14,940 Relaxation took 164.4s
2024-12-10 01:10:14,940 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.3 pTM=0.342 ipTM=0.232
2024-12-10 01:12:22,172 Relaxation took 127.2s
2024-12-10 01:12:22,172 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.342 ipTM=0.211
2024-12-10 01:15:09,779 Relaxation took 167.6s
2024-12-10 01:15:09,780 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.9 pTM=0.347 ipTM=0.194
2024-12-10 01:17:12,753 Relaxation took 123.0s
2024-12-10 01:17:12,754 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63 pTM=0.333 ipTM=0.187
2024-12-10 01:17:16,039 Done