2024-12-09 23:21:55,408 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-09 23:21:55,723 Running on GPU
2024-12-09 23:21:59,593 Found 6 citations for tools or databases
2024-12-09 23:21:59,594 Query 1/1: WDR76_TNFRSF1B (length 1087)
2024-12-09 23:21:59,909 Sleeping for 8s. Reason: PENDING
2024-12-09 23:22:08,164 Sleeping for 7s. Reason: RUNNING
2024-12-09 23:22:15,427 Sleeping for 8s. Reason: RUNNING
2024-12-09 23:22:23,684 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:22:29,946 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:22:36,213 Sleeping for 10s. Reason: RUNNING
2024-12-09 23:22:46,468 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:22:51,722 Sleeping for 10s. Reason: RUNNING
2024-12-09 23:23:01,982 Sleeping for 9s. Reason: RUNNING
2024-12-09 23:23:11,245 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:23:16,505 Sleeping for 8s. Reason: RUNNING
2024-12-09 23:23:24,761 Sleeping for 9s. Reason: RUNNING
2024-12-09 23:23:34,015 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:23:39,274 Sleeping for 9s. Reason: RUNNING
2024-12-09 23:23:48,534 Sleeping for 8s. Reason: RUNNING
2024-12-09 23:23:56,790 Sleeping for 10s. Reason: RUNNING
2024-12-09 23:24:07,046 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:24:12,296 Sleeping for 7s. Reason: RUNNING
2024-12-09 23:24:19,553 Sleeping for 7s. Reason: RUNNING
2024-12-09 23:24:26,810 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:24:33,067 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:24:39,329 Sleeping for 7s. Reason: RUNNING
2024-12-09 23:24:47,449 Sleeping for 7s. Reason: PENDING
2024-12-09 23:24:54,708 Sleeping for 7s. Reason: RUNNING
2024-12-09 23:25:01,965 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:25:08,225 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:25:13,488 Sleeping for 8s. Reason: RUNNING
2024-12-09 23:25:21,746 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:25:27,000 Sleeping for 8s. Reason: RUNNING
2024-12-09 23:25:35,257 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:25:41,523 Sleeping for 7s. Reason: RUNNING
2024-12-09 23:25:48,777 Sleeping for 9s. Reason: RUNNING
2024-12-09 23:25:58,044 Sleeping for 8s. Reason: RUNNING
2024-12-09 23:26:06,311 Sleeping for 5s. Reason: RUNNING
2024-12-09 23:26:11,562 Sleeping for 6s. Reason: RUNNING
2024-12-09 23:26:17,836 Sleeping for 10s. Reason: RUNNING
2024-12-09 23:26:30,537 Setting max_seq=508, max_extra_seq=2048
2024-12-09 23:29:36,533 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.8 pTM=0.491 ipTM=0.422
2024-12-09 23:30:02,561 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.4 pTM=0.426 ipTM=0.193 tol=13.7
2024-12-09 23:30:28,678 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.4 pTM=0.426 ipTM=0.187 tol=9.96
2024-12-09 23:30:54,930 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.3 pTM=0.421 ipTM=0.169 tol=12.8
2024-12-09 23:31:21,246 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.1 pTM=0.427 ipTM=0.194 tol=21.3
2024-12-09 23:31:47,505 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.6 pTM=0.447 ipTM=0.257 tol=13.6
2024-12-09 23:32:13,844 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.6 pTM=0.427 ipTM=0.188 tol=8.34
2024-12-09 23:32:40,182 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.7 pTM=0.434 ipTM=0.224 tol=5.71
2024-12-09 23:33:06,558 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.8 pTM=0.428 ipTM=0.189 tol=5.56
2024-12-09 23:33:32,976 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56 pTM=0.426 ipTM=0.178 tol=6.47
2024-12-09 23:33:59,351 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.8 pTM=0.436 ipTM=0.217 tol=10.5
2024-12-09 23:34:25,763 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56 pTM=0.427 ipTM=0.189 tol=8.95
2024-12-09 23:34:52,166 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56 pTM=0.426 ipTM=0.181 tol=8.45
2024-12-09 23:35:18,547 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56 pTM=0.443 ipTM=0.262 tol=6.74
2024-12-09 23:35:44,954 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.8 pTM=0.425 ipTM=0.182 tol=6.95
2024-12-09 23:36:11,372 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.8 pTM=0.439 ipTM=0.239 tol=6.08
2024-12-09 23:36:37,816 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.2 pTM=0.428 ipTM=0.227 tol=10.4
2024-12-09 23:37:04,230 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56 pTM=0.433 ipTM=0.249 tol=9.52
2024-12-09 23:37:30,628 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.2 pTM=0.441 ipTM=0.242 tol=10.1
2024-12-09 23:37:57,024 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.2 pTM=0.435 ipTM=0.237 tol=5.12
2024-12-09 23:38:23,444 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.3 pTM=0.43 ipTM=0.244 tol=6.82
2024-12-09 23:38:49,849 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.5 pTM=0.432 ipTM=0.253 tol=9.12
2024-12-09 23:39:16,221 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.6 pTM=0.453 ipTM=0.266 tol=7.2
2024-12-09 23:39:42,621 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.6 pTM=0.439 ipTM=0.25 tol=12.4
2024-12-09 23:40:09,017 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.5 pTM=0.455 ipTM=0.265 tol=14.6
2024-12-09 23:40:35,512 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.8 pTM=0.434 ipTM=0.257 tol=21.8
2024-12-09 23:41:01,886 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.8 pTM=0.455 ipTM=0.263 tol=22.2
2024-12-09 23:41:28,281 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.2 pTM=0.447 ipTM=0.277 tol=9.53
2024-12-09 23:41:54,680 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.8 pTM=0.44 ipTM=0.278 tol=8.53
2024-12-09 23:42:21,059 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.45 ipTM=0.291 tol=9.84
2024-12-09 23:42:47,477 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.9 pTM=0.436 ipTM=0.278 tol=10.6
2024-12-09 23:42:47,478 alphafold2_multimer_v3_model_1_seed_000 took 971.6s (30 recycles)
2024-12-09 23:43:14,560 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.9 pTM=0.445 ipTM=0.218
2024-12-09 23:43:40,913 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.4 pTM=0.507 ipTM=0.407 tol=20.4
2024-12-09 23:44:07,321 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.6 pTM=0.439 ipTM=0.381 tol=19
2024-12-09 23:44:33,756 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.9 pTM=0.439 ipTM=0.348 tol=11.2
2024-12-09 23:45:00,185 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55 pTM=0.437 ipTM=0.334 tol=8.1
2024-12-09 23:45:26,631 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.1 pTM=0.438 ipTM=0.346 tol=6.48
2024-12-09 23:45:53,089 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.2 pTM=0.437 ipTM=0.335 tol=9.16
2024-12-09 23:46:19,527 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.1 pTM=0.437 ipTM=0.341 tol=10.4
2024-12-09 23:46:45,952 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.2 pTM=0.437 ipTM=0.344 tol=5.66
2024-12-09 23:47:12,385 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.5 pTM=0.439 ipTM=0.352 tol=5.76
2024-12-09 23:47:38,795 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.6 pTM=0.438 ipTM=0.345 tol=3.47
2024-12-09 23:48:05,200 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.6 pTM=0.44 ipTM=0.337 tol=2.86
2024-12-09 23:48:31,626 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.5 pTM=0.436 ipTM=0.3 tol=3.35
2024-12-09 23:48:58,014 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.5 pTM=0.439 ipTM=0.312 tol=2.68
2024-12-09 23:49:24,386 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.5 pTM=0.438 ipTM=0.33 tol=2.72
2024-12-09 23:49:50,776 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.5 pTM=0.44 ipTM=0.348 tol=2.32
2024-12-09 23:50:17,192 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.3 pTM=0.436 ipTM=0.311 tol=3.05
2024-12-09 23:50:43,597 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.3 pTM=0.438 ipTM=0.328 tol=3.21
2024-12-09 23:51:09,974 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.6 pTM=0.438 ipTM=0.348 tol=3.06
2024-12-09 23:51:36,356 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.4 pTM=0.439 ipTM=0.334 tol=2.67
2024-12-09 23:52:02,744 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.8 pTM=0.438 ipTM=0.337 tol=3.18
2024-12-09 23:52:29,122 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.6 pTM=0.439 ipTM=0.317 tol=3
2024-12-09 23:52:55,512 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.6 pTM=0.437 ipTM=0.32 tol=3.79
2024-12-09 23:53:21,926 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.6 pTM=0.439 ipTM=0.344 tol=3.83
2024-12-09 23:53:48,332 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.5 pTM=0.437 ipTM=0.334 tol=3.39
2024-12-09 23:54:14,740 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.5 pTM=0.438 ipTM=0.333 tol=2.37
2024-12-09 23:54:41,165 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.4 pTM=0.437 ipTM=0.32 tol=4.06
2024-12-09 23:55:07,592 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.4 pTM=0.438 ipTM=0.321 tol=3.7
2024-12-09 23:55:33,999 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.7 pTM=0.44 ipTM=0.349 tol=4.09
2024-12-09 23:56:00,381 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.6 pTM=0.44 ipTM=0.319 tol=4.15
2024-12-09 23:56:26,796 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.5 pTM=0.439 ipTM=0.351 tol=3.75
2024-12-09 23:56:26,797 alphafold2_multimer_v3_model_2_seed_000 took 818.6s (30 recycles)
2024-12-09 23:56:53,911 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.5 pTM=0.437 ipTM=0.266
2024-12-09 23:57:20,350 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.9 pTM=0.533 ipTM=0.507 tol=23.9
2024-12-09 23:57:46,905 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52.6 pTM=0.427 ipTM=0.268 tol=25.3
2024-12-09 23:58:13,448 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.2 pTM=0.43 ipTM=0.311 tol=19.3
2024-12-09 23:58:39,896 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.1 pTM=0.496 ipTM=0.373 tol=25.1
2024-12-09 23:59:06,459 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.3 pTM=0.438 ipTM=0.354 tol=25.1
2024-12-09 23:59:32,958 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.7 pTM=0.438 ipTM=0.376 tol=15.2
2024-12-09 23:59:59,409 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.9 pTM=0.49 ipTM=0.379 tol=21.2
2024-12-10 00:00:25,945 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.4 pTM=0.44 ipTM=0.381 tol=22.5
2024-12-10 00:00:52,429 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.6 pTM=0.437 ipTM=0.374 tol=11.6
2024-12-10 00:01:18,868 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.9 pTM=0.527 ipTM=0.464 tol=21.7
2024-12-10 00:01:45,421 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.8 pTM=0.437 ipTM=0.354 tol=19.1
2024-12-10 00:02:11,974 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.9 pTM=0.438 ipTM=0.369 tol=10.1
2024-12-10 00:02:38,457 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.9 pTM=0.502 ipTM=0.398 tol=20.3
2024-12-10 00:03:05,056 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.9 pTM=0.437 ipTM=0.355 tol=23.1
2024-12-10 00:03:31,608 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.8 pTM=0.437 ipTM=0.357 tol=14.7
2024-12-10 00:03:58,092 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.1 pTM=0.487 ipTM=0.36 tol=20.6
2024-12-10 00:04:24,668 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.8 pTM=0.438 ipTM=0.354 tol=24.5
2024-12-10 00:04:51,192 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.1 pTM=0.437 ipTM=0.363 tol=9.37
2024-12-10 00:05:17,654 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.3 pTM=0.458 ipTM=0.373 tol=18.2
2024-12-10 00:05:44,233 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.7 pTM=0.438 ipTM=0.337 tol=20.5
2024-12-10 00:06:10,730 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54 pTM=0.437 ipTM=0.373 tol=7.54
2024-12-10 00:06:37,162 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.4 pTM=0.458 ipTM=0.349 tol=18
2024-12-10 00:07:03,688 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.8 pTM=0.439 ipTM=0.382 tol=19.3
2024-12-10 00:07:30,198 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.9 pTM=0.436 ipTM=0.359 tol=9.19
2024-12-10 00:07:56,634 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.3 pTM=0.474 ipTM=0.368 tol=19.2
2024-12-10 00:08:23,158 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.8 pTM=0.436 ipTM=0.342 tol=21.2
2024-12-10 00:08:49,682 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54 pTM=0.437 ipTM=0.369 tol=8.88
2024-12-10 00:09:16,125 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.2 pTM=0.517 ipTM=0.436 tol=21.5
2024-12-10 00:09:42,636 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.3 pTM=0.435 ipTM=0.337 tol=10.7
2024-12-10 00:10:09,195 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.9 pTM=0.438 ipTM=0.386 tol=10.3
2024-12-10 00:10:09,196 alphafold2_multimer_v3_model_3_seed_000 took 821.7s (30 recycles)
2024-12-10 00:10:36,323 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.6 pTM=0.444 ipTM=0.271
2024-12-10 00:11:02,781 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.6 pTM=0.428 ipTM=0.307 tol=19.2
2024-12-10 00:11:29,182 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.8 pTM=0.459 ipTM=0.313 tol=22.2
2024-12-10 00:11:55,577 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.6 pTM=0.443 ipTM=0.364 tol=8.2
2024-12-10 00:12:22,004 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.5 pTM=0.437 ipTM=0.359 tol=11.3
2024-12-10 00:12:48,419 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=54.3 pTM=0.448 ipTM=0.342 tol=10.6
2024-12-10 00:13:14,839 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=54.2 pTM=0.437 ipTM=0.327 tol=5.31
2024-12-10 00:13:41,267 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.9 pTM=0.441 ipTM=0.331 tol=4.18
2024-12-10 00:14:07,695 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.1 pTM=0.44 ipTM=0.345 tol=5.06
2024-12-10 00:14:34,161 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.6 pTM=0.438 ipTM=0.356 tol=5.83
2024-12-10 00:15:00,576 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55 pTM=0.463 ipTM=0.346 tol=7.46
2024-12-10 00:15:27,025 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.3 pTM=0.443 ipTM=0.354 tol=7.82
2024-12-10 00:15:53,472 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54.2 pTM=0.443 ipTM=0.328 tol=3.94
2024-12-10 00:16:19,912 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.2 pTM=0.444 ipTM=0.333 tol=4.38
2024-12-10 00:16:46,354 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.2 pTM=0.442 ipTM=0.318 tol=2.97
2024-12-10 00:17:12,785 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.2 pTM=0.443 ipTM=0.336 tol=2.38
2024-12-10 00:17:39,214 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.1 pTM=0.443 ipTM=0.334 tol=2.7
2024-12-10 00:18:05,656 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=54.3 pTM=0.442 ipTM=0.337 tol=2.38
2024-12-10 00:18:32,118 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54 pTM=0.44 ipTM=0.334 tol=5.67
2024-12-10 00:18:58,576 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=54.6 pTM=0.443 ipTM=0.319 tol=5.39
2024-12-10 00:19:25,003 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.2 pTM=0.469 ipTM=0.314 tol=15.8
2024-12-10 00:19:51,490 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.9 pTM=0.434 ipTM=0.314 tol=13
2024-12-10 00:20:17,969 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.2 pTM=0.434 ipTM=0.294 tol=8.94
2024-12-10 00:20:44,410 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.4 pTM=0.447 ipTM=0.312 tol=15.3
2024-12-10 00:21:10,893 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.5 pTM=0.433 ipTM=0.302 tol=18.8
2024-12-10 00:21:37,393 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53 pTM=0.434 ipTM=0.295 tol=11.9
2024-12-10 00:22:03,870 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=54 pTM=0.434 ipTM=0.3 tol=12.1
2024-12-10 00:22:30,295 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.7 pTM=0.449 ipTM=0.324 tol=11.4
2024-12-10 00:22:56,746 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.2 pTM=0.439 ipTM=0.331 tol=4.85
2024-12-10 00:23:23,133 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.9 pTM=0.497 ipTM=0.395 tol=15.3
2024-12-10 00:23:49,592 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.9 pTM=0.432 ipTM=0.319 tol=9.36
2024-12-10 00:23:49,593 alphafold2_multimer_v3_model_4_seed_000 took 819.7s (30 recycles)
2024-12-10 00:24:16,776 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.5 pTM=0.435 ipTM=0.349
2024-12-10 00:24:43,226 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.2 pTM=0.503 ipTM=0.444 tol=18
2024-12-10 00:25:09,760 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.5 pTM=0.423 ipTM=0.186 tol=21.5
2024-12-10 00:25:36,321 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.9 pTM=0.429 ipTM=0.341 tol=10.7
2024-12-10 00:26:02,869 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.4 pTM=0.439 ipTM=0.371 tol=8.06
2024-12-10 00:26:29,412 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55 pTM=0.437 ipTM=0.395 tol=6.07
2024-12-10 00:26:55,953 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.2 pTM=0.48 ipTM=0.37 tol=24.7
2024-12-10 00:27:22,539 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.3 pTM=0.434 ipTM=0.374 tol=17
2024-12-10 00:27:49,123 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.5 pTM=0.435 ipTM=0.374 tol=14.2
2024-12-10 00:28:15,648 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.3 pTM=0.488 ipTM=0.384 tol=21.8
2024-12-10 00:28:42,209 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.4 pTM=0.438 ipTM=0.383 tol=9.77
2024-12-10 00:29:08,774 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.9 pTM=0.437 ipTM=0.384 tol=8.71
2024-12-10 00:29:35,299 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.5 pTM=0.481 ipTM=0.373 tol=16.1
2024-12-10 00:30:01,804 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.4 pTM=0.452 ipTM=0.378 tol=9.99
2024-12-10 00:30:28,306 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.9 pTM=0.531 ipTM=0.478 tol=14.8
2024-12-10 00:30:54,890 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55 pTM=0.436 ipTM=0.355 tol=10.4
2024-12-10 00:31:21,466 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.6 pTM=0.437 ipTM=0.388 tol=9.38
2024-12-10 00:31:47,975 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.7 pTM=0.488 ipTM=0.385 tol=14.2
2024-12-10 00:32:14,567 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.8 pTM=0.436 ipTM=0.391 tol=18.4
2024-12-10 00:32:41,174 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.8 pTM=0.437 ipTM=0.366 tol=14.2
2024-12-10 00:33:07,745 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.8 pTM=0.437 ipTM=0.367 tol=10.5
2024-12-10 00:33:34,317 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.5 pTM=0.443 ipTM=0.356 tol=21.3
2024-12-10 00:34:00,923 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.9 pTM=0.436 ipTM=0.357 tol=13.2
2024-12-10 00:34:27,474 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.5 pTM=0.437 ipTM=0.379 tol=14.8
2024-12-10 00:34:53,987 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.2 pTM=0.488 ipTM=0.382 tol=21.4
2024-12-10 00:35:20,554 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55 pTM=0.435 ipTM=0.359 tol=12.7
2024-12-10 00:35:47,125 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.7 pTM=0.439 ipTM=0.356 tol=6.85
2024-12-10 00:36:13,699 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.8 pTM=0.437 ipTM=0.383 tol=9.78
2024-12-10 00:36:40,293 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.8 pTM=0.437 ipTM=0.37 tol=9.77
2024-12-10 00:37:06,866 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.7 pTM=0.438 ipTM=0.36 tol=8.84
2024-12-10 00:37:33,437 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.9 pTM=0.437 ipTM=0.375 tol=6.95
2024-12-10 00:37:33,438 alphafold2_multimer_v3_model_5_seed_000 took 823.1s (30 recycles)
2024-12-10 00:37:34,160 reranking models by 'multimer' metric
2024-12-10 00:37:37,684 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 00:38:55,712 Relaxation took 81.6s
2024-12-10 00:38:55,712 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.9 pTM=0.438 ipTM=0.386
2024-12-10 00:40:16,842 Relaxation took 81.1s
2024-12-10 00:40:16,842 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.9 pTM=0.437 ipTM=0.375
2024-12-10 00:41:54,963 Relaxation took 98.1s
2024-12-10 00:41:54,964 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.5 pTM=0.439 ipTM=0.351
2024-12-10 00:43:18,368 Relaxation took 83.4s
2024-12-10 00:43:18,368 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.9 pTM=0.432 ipTM=0.319
2024-12-10 00:44:31,478 Relaxation took 73.1s
2024-12-10 00:44:31,478 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.9 pTM=0.436 ipTM=0.278
2024-12-10 00:44:33,511 Done