2024-12-10 00:00:16,532 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 00:00:16,846 Running on GPU 2024-12-10 00:00:20,273 Found 6 citations for tools or databases 2024-12-10 00:00:20,273 Query 1/1: WDTC1_PDCL (length 978) 2024-12-10 00:00:20,559 Sleeping for 7s. Reason: PENDING 2024-12-10 00:00:27,813 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:00:36,062 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:00:42,322 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:00:52,579 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:01:02,850 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:01:11,107 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:01:17,366 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:01:24,625 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:01:30,880 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:01:41,141 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:01:47,396 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:01:54,657 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:01:59,915 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:02:06,172 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:02:14,435 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:02:21,693 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:02:29,945 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:02:39,206 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:02:45,464 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:02:54,726 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:03:02,983 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:03:13,708 Sleeping for 7s. Reason: PENDING 2024-12-10 00:03:20,976 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:03:26,232 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:03:34,491 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:03:40,746 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:03:45,996 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:03:54,254 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:04:03,511 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:04:08,762 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:04:16,018 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:04:21,274 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:04:28,534 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:04:38,804 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:04:48,061 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:04:57,329 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:05:06,434 Setting max_seq=508, max_extra_seq=2048 2024-12-10 00:07:50,166 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.3 pTM=0.629 ipTM=0.194 2024-12-10 00:08:10,645 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.9 pTM=0.634 ipTM=0.393 tol=6.66 2024-12-10 00:08:31,159 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.6 pTM=0.632 ipTM=0.204 tol=2.18 2024-12-10 00:08:51,710 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.1 pTM=0.631 ipTM=0.203 tol=1.64 2024-12-10 00:09:12,276 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.9 pTM=0.635 ipTM=0.375 tol=1.54 2024-12-10 00:09:32,896 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.1 pTM=0.635 ipTM=0.389 tol=1.53 2024-12-10 00:09:53,499 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.2 pTM=0.637 ipTM=0.359 tol=1.21 2024-12-10 00:10:14,155 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.2 pTM=0.637 ipTM=0.354 tol=1.12 2024-12-10 00:10:34,792 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.3 pTM=0.638 ipTM=0.391 tol=1.17 2024-12-10 00:10:55,421 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.1 pTM=0.634 ipTM=0.368 tol=1.03 2024-12-10 00:11:16,074 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.3 pTM=0.635 ipTM=0.367 tol=0.796 2024-12-10 00:11:36,710 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.4 pTM=0.633 ipTM=0.362 tol=0.835 2024-12-10 00:11:57,332 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.633 ipTM=0.348 tol=1.03 2024-12-10 00:12:17,938 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.1 pTM=0.634 ipTM=0.362 tol=0.814 2024-12-10 00:12:38,591 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.2 pTM=0.636 ipTM=0.383 tol=0.68 2024-12-10 00:12:59,233 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.2 pTM=0.635 ipTM=0.356 tol=0.783 2024-12-10 00:13:19,874 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.2 pTM=0.636 ipTM=0.378 tol=0.895 2024-12-10 00:13:40,533 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.5 pTM=0.636 ipTM=0.389 tol=1.09 2024-12-10 00:14:01,171 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67 pTM=0.633 ipTM=0.378 tol=0.928 2024-12-10 00:14:21,805 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.4 pTM=0.635 ipTM=0.37 tol=1.08 2024-12-10 00:14:42,445 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.2 pTM=0.635 ipTM=0.385 tol=0.919 2024-12-10 00:15:03,109 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.5 pTM=0.635 ipTM=0.38 tol=1.02 2024-12-10 00:15:23,761 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.3 pTM=0.637 ipTM=0.362 tol=1.33 2024-12-10 00:15:44,414 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.5 pTM=0.635 ipTM=0.357 tol=0.882 2024-12-10 00:16:05,061 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.2 pTM=0.635 ipTM=0.392 tol=0.833 2024-12-10 00:16:25,697 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.4 pTM=0.631 ipTM=0.372 tol=0.867 2024-12-10 00:16:46,342 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.4 pTM=0.634 ipTM=0.355 tol=0.809 2024-12-10 00:17:06,999 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.6 pTM=0.634 ipTM=0.395 tol=0.916 2024-12-10 00:17:27,672 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.5 pTM=0.634 ipTM=0.367 tol=0.784 2024-12-10 00:17:48,333 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.5 pTM=0.634 ipTM=0.353 tol=0.828 2024-12-10 00:18:08,972 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.1 pTM=0.634 ipTM=0.384 tol=0.86 2024-12-10 00:18:08,973 alphafold2_multimer_v3_model_1_seed_000 took 778.9s (30 recycles) 2024-12-10 00:18:30,242 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.3 pTM=0.621 ipTM=0.204 2024-12-10 00:18:50,973 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.2 pTM=0.635 ipTM=0.426 tol=5.21 2024-12-10 00:19:11,715 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.6 pTM=0.636 ipTM=0.224 tol=3.33 2024-12-10 00:19:32,462 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.8 pTM=0.636 ipTM=0.234 tol=2.26 2024-12-10 00:19:53,199 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.6 pTM=0.635 ipTM=0.224 tol=2.44 2024-12-10 00:20:13,956 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.8 pTM=0.642 ipTM=0.314 tol=1.69 2024-12-10 00:20:34,718 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.1 pTM=0.643 ipTM=0.399 tol=1.41 2024-12-10 00:20:55,479 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.1 pTM=0.645 ipTM=0.365 tol=0.87 2024-12-10 00:21:16,228 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.4 pTM=0.644 ipTM=0.377 tol=0.845 2024-12-10 00:21:36,971 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.2 pTM=0.642 ipTM=0.366 tol=0.895 2024-12-10 00:21:57,718 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.3 pTM=0.64 ipTM=0.372 tol=1.02 2024-12-10 00:22:18,439 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.4 pTM=0.64 ipTM=0.369 tol=0.93 2024-12-10 00:22:39,169 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.3 pTM=0.638 ipTM=0.371 tol=1.32 2024-12-10 00:22:59,895 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.3 pTM=0.639 ipTM=0.373 tol=0.823 2024-12-10 00:23:20,645 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.4 pTM=0.638 ipTM=0.371 tol=2.58 2024-12-10 00:23:41,366 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.4 pTM=0.638 ipTM=0.39 tol=1.77 2024-12-10 00:24:02,113 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.5 pTM=0.638 ipTM=0.383 tol=1.35 2024-12-10 00:24:22,843 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.5 pTM=0.639 ipTM=0.367 tol=1.41 2024-12-10 00:24:43,588 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.4 pTM=0.637 ipTM=0.379 tol=1.48 2024-12-10 00:25:04,334 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.5 pTM=0.638 ipTM=0.382 tol=1.34 2024-12-10 00:25:25,079 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.6 pTM=0.639 ipTM=0.388 tol=2.29 2024-12-10 00:25:45,824 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.6 pTM=0.641 ipTM=0.381 tol=1.97 2024-12-10 00:26:06,569 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.6 pTM=0.637 ipTM=0.372 tol=2.19 2024-12-10 00:26:27,303 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.8 pTM=0.637 ipTM=0.377 tol=1.99 2024-12-10 00:26:48,031 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.6 pTM=0.636 ipTM=0.379 tol=0.97 2024-12-10 00:27:08,748 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.6 pTM=0.637 ipTM=0.376 tol=1.39 2024-12-10 00:27:29,483 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.7 pTM=0.636 ipTM=0.348 tol=1.96 2024-12-10 00:27:50,212 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.9 pTM=0.638 ipTM=0.396 tol=1.24 2024-12-10 00:28:10,965 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.9 pTM=0.638 ipTM=0.379 tol=2.33 2024-12-10 00:28:31,697 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.8 pTM=0.639 ipTM=0.338 tol=2.59 2024-12-10 00:28:52,433 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.8 pTM=0.636 ipTM=0.35 tol=1.28 2024-12-10 00:28:52,434 alphafold2_multimer_v3_model_2_seed_000 took 642.9s (30 recycles) 2024-12-10 00:29:13,770 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.3 pTM=0.628 ipTM=0.33 2024-12-10 00:29:34,576 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.5 pTM=0.638 ipTM=0.408 tol=7.76 2024-12-10 00:29:55,403 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.3 pTM=0.64 ipTM=0.348 tol=3.84 2024-12-10 00:30:16,209 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.9 pTM=0.644 ipTM=0.323 tol=3.33 2024-12-10 00:30:37,028 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.8 pTM=0.641 ipTM=0.301 tol=2.82 2024-12-10 00:30:57,854 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68 pTM=0.644 ipTM=0.303 tol=2.21 2024-12-10 00:31:18,656 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68 pTM=0.645 ipTM=0.358 tol=1.57 2024-12-10 00:31:39,478 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.4 pTM=0.651 ipTM=0.371 tol=1.29 2024-12-10 00:32:00,331 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.2 pTM=0.647 ipTM=0.389 tol=1.03 2024-12-10 00:32:21,159 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.1 pTM=0.646 ipTM=0.295 tol=0.792 2024-12-10 00:32:42,001 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68 pTM=0.646 ipTM=0.292 tol=1.06 2024-12-10 00:33:02,819 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68.1 pTM=0.641 ipTM=0.292 tol=0.967 2024-12-10 00:33:23,624 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.8 pTM=0.641 ipTM=0.274 tol=1.01 2024-12-10 00:33:44,437 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.9 pTM=0.642 ipTM=0.277 tol=0.973 2024-12-10 00:34:05,265 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.8 pTM=0.642 ipTM=0.294 tol=1.02 2024-12-10 00:34:26,081 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.8 pTM=0.64 ipTM=0.277 tol=0.794 2024-12-10 00:34:46,925 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68 pTM=0.644 ipTM=0.296 tol=1.12 2024-12-10 00:35:07,750 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.639 ipTM=0.323 tol=0.772 2024-12-10 00:35:28,574 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.6 pTM=0.64 ipTM=0.261 tol=0.902 2024-12-10 00:35:49,396 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.8 pTM=0.639 ipTM=0.295 tol=0.707 2024-12-10 00:36:10,208 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68 pTM=0.643 ipTM=0.273 tol=0.654 2024-12-10 00:36:31,029 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68 pTM=0.642 ipTM=0.282 tol=0.546 2024-12-10 00:36:51,854 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.1 pTM=0.643 ipTM=0.293 tol=0.758 2024-12-10 00:37:12,689 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.1 pTM=0.641 ipTM=0.299 tol=1.18 2024-12-10 00:37:33,543 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.9 pTM=0.641 ipTM=0.3 tol=0.728 2024-12-10 00:37:54,365 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.7 pTM=0.637 ipTM=0.23 tol=1.7 2024-12-10 00:38:15,211 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.1 pTM=0.643 ipTM=0.316 tol=1.67 2024-12-10 00:38:36,058 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.1 pTM=0.643 ipTM=0.286 tol=1.88 2024-12-10 00:38:56,929 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.2 pTM=0.644 ipTM=0.314 tol=1.2 2024-12-10 00:39:17,775 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68 pTM=0.643 ipTM=0.318 tol=1.62 2024-12-10 00:39:38,639 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.8 pTM=0.64 ipTM=0.315 tol=1.76 2024-12-10 00:39:38,640 alphafold2_multimer_v3_model_3_seed_000 took 645.6s (30 recycles) 2024-12-10 00:39:59,989 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.4 pTM=0.638 ipTM=0.316 2024-12-10 00:40:20,777 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.6 pTM=0.638 ipTM=0.213 tol=8.91 2024-12-10 00:40:41,581 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.4 pTM=0.635 ipTM=0.274 tol=5.85 2024-12-10 00:41:02,397 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.5 pTM=0.627 ipTM=0.26 tol=4.49 2024-12-10 00:41:23,208 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.7 pTM=0.629 ipTM=0.259 tol=2.79 2024-12-10 00:41:44,031 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.6 pTM=0.625 ipTM=0.25 tol=3.65 2024-12-10 00:42:04,837 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.7 pTM=0.626 ipTM=0.295 tol=2.6 2024-12-10 00:42:25,652 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.8 pTM=0.628 ipTM=0.271 tol=3.44 2024-12-10 00:42:46,461 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.6 pTM=0.628 ipTM=0.185 tol=2.59 2024-12-10 00:43:07,288 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.7 pTM=0.628 ipTM=0.224 tol=3.3 2024-12-10 00:43:28,095 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.6 pTM=0.632 ipTM=0.256 tol=3.54 2024-12-10 00:43:48,898 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.9 pTM=0.628 ipTM=0.243 tol=2.12 2024-12-10 00:44:09,678 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.7 pTM=0.631 ipTM=0.258 tol=3.9 2024-12-10 00:44:30,473 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.6 pTM=0.627 ipTM=0.182 tol=2.99 2024-12-10 00:44:51,255 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.629 ipTM=0.258 tol=2.04 2024-12-10 00:45:12,034 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.4 pTM=0.628 ipTM=0.228 tol=1.57 2024-12-10 00:45:32,834 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66 pTM=0.631 ipTM=0.3 tol=2.6 2024-12-10 00:45:53,627 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.1 pTM=0.626 ipTM=0.19 tol=2.25 2024-12-10 00:46:14,412 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.6 pTM=0.634 ipTM=0.27 tol=4.74 2024-12-10 00:46:35,207 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.8 pTM=0.626 ipTM=0.211 tol=3.94 2024-12-10 00:46:55,982 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.8 pTM=0.631 ipTM=0.19 tol=5.79 2024-12-10 00:47:16,778 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.1 pTM=0.628 ipTM=0.304 tol=6.93 2024-12-10 00:47:37,556 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.7 pTM=0.63 ipTM=0.187 tol=5.64 2024-12-10 00:47:58,341 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.9 pTM=0.625 ipTM=0.199 tol=2.55 2024-12-10 00:48:19,126 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.9 pTM=0.626 ipTM=0.29 tol=1.89 2024-12-10 00:48:39,922 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66 pTM=0.624 ipTM=0.415 tol=4.59 2024-12-10 00:49:00,705 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66 pTM=0.627 ipTM=0.423 tol=4.1 2024-12-10 00:49:21,511 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.3 pTM=0.628 ipTM=0.406 tol=4.07 2024-12-10 00:49:42,302 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66 pTM=0.627 ipTM=0.416 tol=3.09 2024-12-10 00:50:03,089 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.626 ipTM=0.424 tol=3.56 2024-12-10 00:50:23,872 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.2 pTM=0.624 ipTM=0.43 tol=3.45 2024-12-10 00:50:23,873 alphafold2_multimer_v3_model_4_seed_000 took 644.6s (30 recycles) 2024-12-10 00:50:45,206 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.4 pTM=0.623 ipTM=0.332 2024-12-10 00:51:05,970 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.626 ipTM=0.33 tol=6.23 2024-12-10 00:51:26,782 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.6 pTM=0.626 ipTM=0.248 tol=3.24 2024-12-10 00:51:47,592 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.5 pTM=0.628 ipTM=0.236 tol=3.39 2024-12-10 00:52:08,384 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.627 ipTM=0.31 tol=4.19 2024-12-10 00:52:29,204 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.6 pTM=0.63 ipTM=0.294 tol=2.96 2024-12-10 00:52:50,038 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.9 pTM=0.627 ipTM=0.308 tol=4.26 2024-12-10 00:53:10,859 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.8 pTM=0.629 ipTM=0.298 tol=1.68 2024-12-10 00:53:31,679 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.9 pTM=0.628 ipTM=0.309 tol=2.31 2024-12-10 00:53:52,500 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.9 pTM=0.628 ipTM=0.293 tol=1.75 2024-12-10 00:54:13,315 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68 pTM=0.628 ipTM=0.285 tol=1.9 2024-12-10 00:54:34,123 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.1 pTM=0.628 ipTM=0.303 tol=1.19 2024-12-10 00:54:54,933 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.1 pTM=0.629 ipTM=0.282 tol=1.49 2024-12-10 00:55:15,764 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.1 pTM=0.63 ipTM=0.298 tol=1.29 2024-12-10 00:55:36,602 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.1 pTM=0.628 ipTM=0.308 tol=2.62 2024-12-10 00:55:57,430 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.9 pTM=0.629 ipTM=0.298 tol=4.44 2024-12-10 00:56:18,248 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.9 pTM=0.629 ipTM=0.292 tol=4.18 2024-12-10 00:56:39,056 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68 pTM=0.63 ipTM=0.316 tol=3.1 2024-12-10 00:56:59,875 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68 pTM=0.628 ipTM=0.287 tol=3.25 2024-12-10 00:57:20,692 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.4 pTM=0.634 ipTM=0.303 tol=1.93 2024-12-10 00:57:41,517 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.3 pTM=0.632 ipTM=0.299 tol=2.43 2024-12-10 00:58:02,339 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.3 pTM=0.63 ipTM=0.29 tol=2.26 2024-12-10 00:58:23,150 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.3 pTM=0.63 ipTM=0.305 tol=1.58 2024-12-10 00:58:43,965 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.2 pTM=0.629 ipTM=0.303 tol=1.64 2024-12-10 00:59:04,784 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.2 pTM=0.629 ipTM=0.3 tol=1.55 2024-12-10 00:59:25,595 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.1 pTM=0.63 ipTM=0.299 tol=1.52 2024-12-10 00:59:46,426 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.2 pTM=0.629 ipTM=0.303 tol=1.72 2024-12-10 01:00:07,252 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.2 pTM=0.633 ipTM=0.313 tol=2.21 2024-12-10 01:00:28,091 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.4 pTM=0.63 ipTM=0.287 tol=2.51 2024-12-10 01:00:48,924 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.1 pTM=0.629 ipTM=0.304 tol=1.39 2024-12-10 01:01:09,752 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.2 pTM=0.629 ipTM=0.287 tol=1.63 2024-12-10 01:01:09,753 alphafold2_multimer_v3_model_5_seed_000 took 645.3s (30 recycles) 2024-12-10 01:01:10,343 reranking models by 'multimer' metric 2024-12-10 01:01:13,729 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 01:02:46,424 Relaxation took 96.1s 2024-12-10 01:02:46,424 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.2 pTM=0.624 ipTM=0.43 2024-12-10 01:04:19,615 Relaxation took 93.2s 2024-12-10 01:04:19,616 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.1 pTM=0.634 ipTM=0.384 2024-12-10 01:05:25,680 Relaxation took 66.1s 2024-12-10 01:05:25,680 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.8 pTM=0.636 ipTM=0.35 2024-12-10 01:06:46,933 Relaxation took 81.3s 2024-12-10 01:06:46,933 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.8 pTM=0.64 ipTM=0.315 2024-12-10 01:08:10,995 Relaxation took 84.1s 2024-12-10 01:08:10,995 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.2 pTM=0.629 ipTM=0.287 2024-12-10 01:08:12,987 Done