2024-12-10 00:44:43,991 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 00:44:44,304 Running on GPU 2024-12-10 00:44:45,079 Found 6 citations for tools or databases 2024-12-10 00:44:45,079 Query 1/1: WWP1_TMEM66 (length 1261) 2024-12-10 00:44:45,346 Sleeping for 5s. Reason: PENDING 2024-12-10 00:44:50,601 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:44:55,858 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:45:05,118 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:45:10,380 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:45:18,645 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:45:28,904 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:45:34,155 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:45:40,407 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:45:47,665 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:45:52,920 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:46:01,181 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:46:09,443 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:46:19,870 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:46:29,149 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:46:35,418 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:46:42,684 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:46:47,945 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:46:58,219 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:47:03,478 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:47:12,741 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:47:18,000 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:47:23,262 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:47:31,527 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:47:38,789 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:47:47,419 Sleeping for 7s. Reason: PENDING 2024-12-10 00:47:54,844 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:48:02,107 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:48:09,367 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:48:16,628 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:48:26,895 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:48:35,168 Sleeping for 8s. Reason: RUNNING 2024-12-10 00:48:43,440 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:48:52,705 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:49:02,972 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:49:12,236 Sleeping for 10s. Reason: RUNNING 2024-12-10 00:49:22,501 Sleeping for 6s. Reason: RUNNING 2024-12-10 00:49:28,765 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:49:36,030 Sleeping for 9s. Reason: RUNNING 2024-12-10 00:49:45,295 Sleeping for 5s. Reason: RUNNING 2024-12-10 00:49:50,555 Sleeping for 7s. Reason: RUNNING 2024-12-10 00:50:03,270 Setting max_seq=508, max_extra_seq=2048 2024-12-10 00:53:30,952 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.5 pTM=0.346 ipTM=0.156 2024-12-10 00:54:11,328 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.4 pTM=0.377 ipTM=0.16 tol=14.1 2024-12-10 00:54:51,942 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.6 pTM=0.37 ipTM=0.153 tol=8.68 2024-12-10 00:55:32,658 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.9 pTM=0.354 ipTM=0.154 tol=6.15 2024-12-10 00:56:13,434 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.1 pTM=0.352 ipTM=0.154 tol=3.12 2024-12-10 00:56:54,241 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56 pTM=0.348 ipTM=0.156 tol=2.94 2024-12-10 00:57:35,072 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.1 pTM=0.347 ipTM=0.155 tol=2.42 2024-12-10 00:58:15,914 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56 pTM=0.345 ipTM=0.154 tol=4.85 2024-12-10 00:58:56,806 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.2 pTM=0.347 ipTM=0.154 tol=5.88 2024-12-10 00:59:37,719 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.1 pTM=0.345 ipTM=0.154 tol=2.7 2024-12-10 01:00:18,655 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.2 pTM=0.345 ipTM=0.154 tol=1.76 2024-12-10 01:00:59,560 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.2 pTM=0.345 ipTM=0.153 tol=2.18 2024-12-10 01:01:40,444 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.3 pTM=0.348 ipTM=0.154 tol=2.07 2024-12-10 01:02:21,368 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.1 pTM=0.342 ipTM=0.153 tol=2.26 2024-12-10 01:03:02,302 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.4 pTM=0.349 ipTM=0.156 tol=2.31 2024-12-10 01:03:43,231 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.2 pTM=0.346 ipTM=0.161 tol=3.29 2024-12-10 01:04:24,156 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.6 pTM=0.351 ipTM=0.165 tol=4.18 2024-12-10 01:05:05,081 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.3 pTM=0.348 ipTM=0.164 tol=3.86 2024-12-10 01:05:46,011 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.5 pTM=0.349 ipTM=0.162 tol=4 2024-12-10 01:06:26,974 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.2 pTM=0.347 ipTM=0.163 tol=2.02 2024-12-10 01:07:07,930 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.2 pTM=0.348 ipTM=0.165 tol=2.21 2024-12-10 01:07:48,883 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.3 pTM=0.349 ipTM=0.164 tol=1.41 2024-12-10 01:08:29,858 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.3 pTM=0.351 ipTM=0.167 tol=4.19 2024-12-10 01:09:10,804 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.1 pTM=0.348 ipTM=0.167 tol=6.97 2024-12-10 01:09:51,726 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.3 pTM=0.352 ipTM=0.176 tol=8.2 2024-12-10 01:10:32,636 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.3 pTM=0.35 ipTM=0.178 tol=3.62 2024-12-10 01:11:13,492 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.3 pTM=0.351 ipTM=0.177 tol=2.53 2024-12-10 01:11:54,359 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56 pTM=0.35 ipTM=0.174 tol=1.54 2024-12-10 01:12:35,224 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56 pTM=0.35 ipTM=0.18 tol=1.89 2024-12-10 01:13:16,128 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.9 pTM=0.349 ipTM=0.176 tol=1.38 2024-12-10 01:13:57,023 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56 pTM=0.352 ipTM=0.181 tol=1.21 2024-12-10 01:13:57,024 alphafold2_multimer_v3_model_1_seed_000 took 1428.6s (30 recycles) 2024-12-10 01:14:38,942 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.5 pTM=0.348 ipTM=0.219 2024-12-10 01:15:19,972 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.4 pTM=0.358 ipTM=0.197 tol=16.3 2024-12-10 01:16:00,960 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.8 pTM=0.341 ipTM=0.184 tol=12 2024-12-10 01:16:42,003 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58 pTM=0.37 ipTM=0.146 tol=12.4 2024-12-10 01:17:23,055 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.5 pTM=0.37 ipTM=0.148 tol=7.53 2024-12-10 01:18:04,103 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.6 pTM=0.368 ipTM=0.17 tol=5.04 2024-12-10 01:18:45,131 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.7 pTM=0.369 ipTM=0.186 tol=4.21 2024-12-10 01:19:26,126 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.8 pTM=0.372 ipTM=0.186 tol=2.86 2024-12-10 01:20:07,148 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.9 pTM=0.374 ipTM=0.187 tol=2.86 2024-12-10 01:20:48,187 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59 pTM=0.377 ipTM=0.197 tol=1.7 2024-12-10 01:21:29,193 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59 pTM=0.378 ipTM=0.209 tol=2.1 2024-12-10 01:22:10,120 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.9 pTM=0.379 ipTM=0.206 tol=2.54 2024-12-10 01:22:51,024 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.9 pTM=0.38 ipTM=0.196 tol=5.13 2024-12-10 01:23:31,944 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.8 pTM=0.382 ipTM=0.199 tol=2.8 2024-12-10 01:24:12,868 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59 pTM=0.383 ipTM=0.203 tol=2.46 2024-12-10 01:24:53,796 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59 pTM=0.382 ipTM=0.205 tol=1.89 2024-12-10 01:25:34,778 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59 pTM=0.384 ipTM=0.205 tol=1.44 2024-12-10 01:26:15,787 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59 pTM=0.386 ipTM=0.211 tol=2.15 2024-12-10 01:26:56,764 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.1 pTM=0.386 ipTM=0.21 tol=2.51 2024-12-10 01:27:37,710 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59 pTM=0.384 ipTM=0.214 tol=1.5 2024-12-10 01:28:18,595 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.8 pTM=0.385 ipTM=0.213 tol=3.71 2024-12-10 01:28:59,529 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59 pTM=0.386 ipTM=0.214 tol=1.46 2024-12-10 01:29:40,486 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.9 pTM=0.384 ipTM=0.219 tol=3.68 2024-12-10 01:30:21,465 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.1 pTM=0.386 ipTM=0.22 tol=2.41 2024-12-10 01:31:02,438 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.9 pTM=0.386 ipTM=0.222 tol=2.6 2024-12-10 01:31:43,421 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.1 pTM=0.387 ipTM=0.218 tol=2.5 2024-12-10 01:32:24,410 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.2 pTM=0.386 ipTM=0.216 tol=2.17 2024-12-10 01:33:05,399 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59 pTM=0.386 ipTM=0.206 tol=2.53 2024-12-10 01:33:46,407 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59 pTM=0.386 ipTM=0.212 tol=1.74 2024-12-10 01:34:27,397 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59 pTM=0.385 ipTM=0.213 tol=2.19 2024-12-10 01:35:08,341 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59 pTM=0.386 ipTM=0.215 tol=3.47 2024-12-10 01:35:08,342 alphafold2_multimer_v3_model_2_seed_000 took 1270.4s (30 recycles) 2024-12-10 01:35:50,385 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.6 pTM=0.366 ipTM=0.148 2024-12-10 01:36:31,350 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.2 pTM=0.391 ipTM=0.167 tol=20.8 2024-12-10 01:37:12,264 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.2 pTM=0.396 ipTM=0.163 tol=9.51 2024-12-10 01:37:53,233 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.2 pTM=0.389 ipTM=0.158 tol=7.19 2024-12-10 01:38:34,223 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.4 pTM=0.386 ipTM=0.158 tol=3.72 2024-12-10 01:39:15,220 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.2 pTM=0.388 ipTM=0.159 tol=6.75 2024-12-10 01:39:56,182 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.9 pTM=0.388 ipTM=0.159 tol=4.13 2024-12-10 01:40:37,186 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55 pTM=0.389 ipTM=0.157 tol=3.96 2024-12-10 01:41:18,173 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55 pTM=0.389 ipTM=0.159 tol=2.88 2024-12-10 01:41:59,184 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.9 pTM=0.39 ipTM=0.158 tol=2.67 2024-12-10 01:42:40,158 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.7 pTM=0.389 ipTM=0.16 tol=3.77 2024-12-10 01:43:21,146 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.9 pTM=0.389 ipTM=0.16 tol=4.25 2024-12-10 01:44:02,135 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.9 pTM=0.389 ipTM=0.159 tol=2.78 2024-12-10 01:44:43,124 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.9 pTM=0.391 ipTM=0.16 tol=2.16 2024-12-10 01:45:24,111 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.8 pTM=0.388 ipTM=0.16 tol=3.12 2024-12-10 01:46:05,121 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.9 pTM=0.391 ipTM=0.162 tol=3.02 2024-12-10 01:46:46,114 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.9 pTM=0.392 ipTM=0.164 tol=2.59 2024-12-10 01:47:27,136 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.9 pTM=0.392 ipTM=0.163 tol=2.12 2024-12-10 01:48:08,118 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.8 pTM=0.39 ipTM=0.163 tol=3.18 2024-12-10 01:48:49,074 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.8 pTM=0.389 ipTM=0.164 tol=4.95 2024-12-10 01:49:30,046 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.6 pTM=0.388 ipTM=0.161 tol=10.7 2024-12-10 01:50:11,043 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.9 pTM=0.388 ipTM=0.162 tol=9.66 2024-12-10 01:50:52,010 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.7 pTM=0.388 ipTM=0.16 tol=4.88 2024-12-10 01:51:32,960 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.8 pTM=0.388 ipTM=0.16 tol=3 2024-12-10 01:52:13,942 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.6 pTM=0.385 ipTM=0.159 tol=2.87 2024-12-10 01:52:54,930 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.9 pTM=0.389 ipTM=0.161 tol=2.57 2024-12-10 01:53:35,919 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.9 pTM=0.387 ipTM=0.161 tol=2.45 2024-12-10 01:54:16,876 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.8 pTM=0.388 ipTM=0.164 tol=1.98 2024-12-10 01:54:57,815 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.8 pTM=0.39 ipTM=0.165 tol=1.94 2024-12-10 01:55:38,779 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.8 pTM=0.389 ipTM=0.163 tol=6.44 2024-12-10 01:56:19,789 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.9 pTM=0.388 ipTM=0.162 tol=5.22 2024-12-10 01:56:19,791 alphafold2_multimer_v3_model_3_seed_000 took 1270.5s (30 recycles) 2024-12-10 01:57:01,820 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.2 pTM=0.337 ipTM=0.15 2024-12-10 01:57:42,946 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.3 pTM=0.375 ipTM=0.152 tol=17.8 2024-12-10 01:58:24,070 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=54 pTM=0.372 ipTM=0.152 tol=14.9 2024-12-10 01:59:05,192 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54 pTM=0.363 ipTM=0.149 tol=8.32 2024-12-10 01:59:46,290 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53.7 pTM=0.363 ipTM=0.15 tol=12.3 2024-12-10 02:00:27,373 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52 pTM=0.374 ipTM=0.151 tol=24.4 2024-12-10 02:01:08,438 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.6 pTM=0.361 ipTM=0.154 tol=19 2024-12-10 02:01:49,535 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=54.1 pTM=0.367 ipTM=0.154 tol=10.4 2024-12-10 02:02:30,623 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=54.2 pTM=0.365 ipTM=0.152 tol=8.91 2024-12-10 02:03:11,692 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=54.1 pTM=0.369 ipTM=0.151 tol=6.48 2024-12-10 02:03:52,722 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.9 pTM=0.361 ipTM=0.154 tol=4.59 2024-12-10 02:04:33,735 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.9 pTM=0.372 ipTM=0.158 tol=7.94 2024-12-10 02:05:14,714 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.8 pTM=0.363 ipTM=0.159 tol=6.27 2024-12-10 02:05:55,725 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.7 pTM=0.363 ipTM=0.156 tol=7.66 2024-12-10 02:06:36,732 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.5 pTM=0.36 ipTM=0.157 tol=7.81 2024-12-10 02:07:17,760 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.8 pTM=0.371 ipTM=0.157 tol=4.38 2024-12-10 02:07:58,782 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.8 pTM=0.365 ipTM=0.157 tol=3.99 2024-12-10 02:08:39,807 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.9 pTM=0.373 ipTM=0.158 tol=7.71 2024-12-10 02:09:20,835 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.8 pTM=0.365 ipTM=0.159 tol=7.67 2024-12-10 02:10:01,841 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.9 pTM=0.375 ipTM=0.16 tol=5.25 2024-12-10 02:10:42,814 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.3 pTM=0.359 ipTM=0.158 tol=5.55 2024-12-10 02:11:23,817 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.4 pTM=0.359 ipTM=0.156 tol=6.81 2024-12-10 02:12:04,811 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.4 pTM=0.356 ipTM=0.155 tol=3.98 2024-12-10 02:12:45,800 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53.4 pTM=0.359 ipTM=0.156 tol=2.9 2024-12-10 02:13:26,767 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.1 pTM=0.354 ipTM=0.155 tol=6.46 2024-12-10 02:14:07,829 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.4 pTM=0.333 ipTM=0.15 tol=11 2024-12-10 02:14:48,844 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.9 pTM=0.368 ipTM=0.152 tol=7.18 2024-12-10 02:15:29,836 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.7 pTM=0.362 ipTM=0.156 tol=4.83 2024-12-10 02:16:10,818 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.5 pTM=0.366 ipTM=0.157 tol=4.57 2024-12-10 02:16:51,795 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.6 pTM=0.362 ipTM=0.158 tol=4.01 2024-12-10 02:17:32,770 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.7 pTM=0.369 ipTM=0.162 tol=4.89 2024-12-10 02:17:32,771 alphafold2_multimer_v3_model_4_seed_000 took 1272.0s (30 recycles) 2024-12-10 02:18:14,809 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.8 pTM=0.375 ipTM=0.149 2024-12-10 02:18:55,828 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=55.7 pTM=0.373 ipTM=0.143 tol=12.6 2024-12-10 02:19:36,854 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.8 pTM=0.374 ipTM=0.146 tol=8.07 2024-12-10 02:20:17,894 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.8 pTM=0.368 ipTM=0.146 tol=7.19 2024-12-10 02:20:58,971 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.2 pTM=0.367 ipTM=0.145 tol=7.52 2024-12-10 02:21:40,066 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.1 pTM=0.366 ipTM=0.147 tol=7.77 2024-12-10 02:22:21,116 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.1 pTM=0.364 ipTM=0.147 tol=6.94 2024-12-10 02:23:02,131 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.1 pTM=0.364 ipTM=0.146 tol=1.76 2024-12-10 02:23:43,108 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56 pTM=0.364 ipTM=0.147 tol=2.52 2024-12-10 02:24:24,093 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.9 pTM=0.364 ipTM=0.146 tol=6.14 2024-12-10 02:25:05,076 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.9 pTM=0.364 ipTM=0.146 tol=7.3 2024-12-10 02:25:46,044 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.9 pTM=0.366 ipTM=0.147 tol=3.02 2024-12-10 02:26:27,006 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.9 pTM=0.366 ipTM=0.147 tol=3.26 2024-12-10 02:27:07,954 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56 pTM=0.366 ipTM=0.146 tol=2.72 2024-12-10 02:27:48,901 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.8 pTM=0.365 ipTM=0.146 tol=2.89 2024-12-10 02:28:29,857 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.8 pTM=0.365 ipTM=0.147 tol=3.96 2024-12-10 02:29:10,833 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.9 pTM=0.366 ipTM=0.148 tol=3.97 2024-12-10 02:29:51,800 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.8 pTM=0.367 ipTM=0.147 tol=6.23 2024-12-10 02:30:32,745 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.1 pTM=0.381 ipTM=0.147 tol=6.34 2024-12-10 02:31:13,664 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.8 pTM=0.376 ipTM=0.146 tol=5.83 2024-12-10 02:31:54,604 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.8 pTM=0.371 ipTM=0.147 tol=3 2024-12-10 02:32:35,566 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.8 pTM=0.371 ipTM=0.147 tol=3.08 2024-12-10 02:33:16,535 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.6 pTM=0.369 ipTM=0.146 tol=4.82 2024-12-10 02:33:57,489 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.5 pTM=0.369 ipTM=0.146 tol=3.63 2024-12-10 02:34:38,479 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.3 pTM=0.364 ipTM=0.146 tol=3.34 2024-12-10 02:35:19,489 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.6 pTM=0.369 ipTM=0.146 tol=4.46 2024-12-10 02:36:00,485 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.4 pTM=0.368 ipTM=0.147 tol=2.38 2024-12-10 02:36:41,464 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.5 pTM=0.37 ipTM=0.146 tol=3.49 2024-12-10 02:37:22,433 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.3 pTM=0.366 ipTM=0.146 tol=3.18 2024-12-10 02:38:03,403 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.4 pTM=0.375 ipTM=0.146 tol=3.38 2024-12-10 02:38:44,435 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.3 pTM=0.366 ipTM=0.147 tol=3.97 2024-12-10 02:38:44,436 alphafold2_multimer_v3_model_5_seed_000 took 1270.7s (30 recycles) 2024-12-10 02:38:45,396 reranking models by 'multimer' metric 2024-12-10 02:38:49,826 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 02:40:23,108 Relaxation took 97.7s 2024-12-10 02:40:23,109 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59 pTM=0.386 ipTM=0.215 2024-12-10 02:41:49,034 Relaxation took 85.9s 2024-12-10 02:41:49,034 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56 pTM=0.352 ipTM=0.181 2024-12-10 02:43:52,308 Relaxation took 123.3s 2024-12-10 02:43:52,309 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.9 pTM=0.388 ipTM=0.162 2024-12-10 02:45:55,523 Relaxation took 123.2s 2024-12-10 02:45:55,523 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.7 pTM=0.369 ipTM=0.162 2024-12-10 02:47:27,868 Relaxation took 92.3s 2024-12-10 02:47:27,868 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.3 pTM=0.366 ipTM=0.147 2024-12-10 02:47:30,410 Done