2024-12-10 01:17:55,326 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 01:17:55,648 Running on GPU 2024-12-10 01:17:59,486 Found 6 citations for tools or databases 2024-12-10 01:17:59,486 Query 1/1: WWP2_POLR2C (length 1145) 2024-12-10 01:17:59,785 Sleeping for 5s. Reason: PENDING 2024-12-10 01:18:05,046 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:18:11,306 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:18:21,571 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:18:31,838 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:18:38,090 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:18:47,352 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:18:55,615 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:19:04,874 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:19:12,133 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:19:22,392 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:19:29,647 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:19:35,906 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:19:45,162 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:19:52,421 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:19:58,680 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:20:05,942 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:20:14,196 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:20:24,454 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:20:33,711 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:20:40,996 Sleeping for 8s. Reason: PENDING 2024-12-10 01:20:49,254 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:20:55,516 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:21:04,776 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:21:10,029 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:21:20,293 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:21:29,552 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:21:34,804 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:21:41,062 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:21:47,335 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:21:52,587 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:21:57,839 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:22:07,095 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:22:15,352 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:22:22,623 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:22:28,873 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:22:37,142 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:22:45,399 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:22:58,077 Setting max_seq=508, max_extra_seq=2048 2024-12-10 01:26:15,827 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.4 pTM=0.378 ipTM=0.145 2024-12-10 01:26:45,769 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=67.2 pTM=0.37 ipTM=0.156 tol=11.8 2024-12-10 01:27:15,882 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.1 pTM=0.384 ipTM=0.159 tol=11.3 2024-12-10 01:27:46,087 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.2 pTM=0.371 ipTM=0.154 tol=12.1 2024-12-10 01:28:16,305 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.8 pTM=0.361 ipTM=0.155 tol=5.13 2024-12-10 01:28:46,608 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.8 pTM=0.372 ipTM=0.155 tol=10.1 2024-12-10 01:29:16,991 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.5 pTM=0.36 ipTM=0.152 tol=5.94 2024-12-10 01:29:47,398 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.7 pTM=0.354 ipTM=0.157 tol=9.48 2024-12-10 01:30:17,769 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67 pTM=0.349 ipTM=0.159 tol=3.98 2024-12-10 01:30:48,197 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67 pTM=0.364 ipTM=0.148 tol=8.52 2024-12-10 01:31:18,630 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.2 pTM=0.357 ipTM=0.15 tol=3.21 2024-12-10 01:31:49,086 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.7 pTM=0.36 ipTM=0.157 tol=8.77 2024-12-10 01:32:19,486 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.5 pTM=0.356 ipTM=0.15 tol=4.09 2024-12-10 01:32:49,924 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.4 pTM=0.369 ipTM=0.148 tol=8.56 2024-12-10 01:33:20,372 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.1 pTM=0.359 ipTM=0.156 tol=4.1 2024-12-10 01:33:50,766 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.5 pTM=0.354 ipTM=0.152 tol=8.98 2024-12-10 01:34:21,157 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.3 pTM=0.354 ipTM=0.156 tol=3.09 2024-12-10 01:34:51,560 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.1 pTM=0.364 ipTM=0.156 tol=8.77 2024-12-10 01:35:22,034 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67 pTM=0.354 ipTM=0.154 tol=3.1 2024-12-10 01:35:52,513 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.7 pTM=0.356 ipTM=0.154 tol=9.87 2024-12-10 01:36:22,911 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.6 pTM=0.352 ipTM=0.156 tol=3.12 2024-12-10 01:36:53,301 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.1 pTM=0.362 ipTM=0.153 tol=8.46 2024-12-10 01:37:23,704 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.2 pTM=0.362 ipTM=0.152 tol=3.5 2024-12-10 01:37:54,131 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.8 pTM=0.36 ipTM=0.163 tol=9.52 2024-12-10 01:38:24,538 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67 pTM=0.351 ipTM=0.162 tol=2.81 2024-12-10 01:38:54,988 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.2 pTM=0.363 ipTM=0.158 tol=8.09 2024-12-10 01:39:25,442 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.8 pTM=0.355 ipTM=0.157 tol=3.13 2024-12-10 01:39:55,906 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.5 pTM=0.36 ipTM=0.156 tol=8.94 2024-12-10 01:40:26,381 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67 pTM=0.351 ipTM=0.162 tol=3.93 2024-12-10 01:40:56,847 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67 pTM=0.36 ipTM=0.152 tol=8.45 2024-12-10 01:41:27,299 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.2 pTM=0.361 ipTM=0.156 tol=3.53 2024-12-10 01:41:27,300 alphafold2_multimer_v3_model_1_seed_000 took 1104.0s (30 recycles) 2024-12-10 01:41:58,625 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.7 pTM=0.402 ipTM=0.14 2024-12-10 01:42:29,171 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.6 pTM=0.383 ipTM=0.151 tol=15.8 2024-12-10 01:42:59,715 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.1 pTM=0.354 ipTM=0.157 tol=9.2 2024-12-10 01:43:30,336 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.7 pTM=0.354 ipTM=0.153 tol=9.88 2024-12-10 01:44:00,871 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.9 pTM=0.366 ipTM=0.197 tol=9.41 2024-12-10 01:44:31,379 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.7 pTM=0.353 ipTM=0.297 tol=4.04 2024-12-10 01:45:01,953 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.1 pTM=0.352 ipTM=0.185 tol=14.1 2024-12-10 01:45:32,501 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68 pTM=0.365 ipTM=0.175 tol=14.3 2024-12-10 01:46:02,996 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.3 pTM=0.349 ipTM=0.17 tol=5.68 2024-12-10 01:46:33,505 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.4 pTM=0.365 ipTM=0.272 tol=20.2 2024-12-10 01:47:03,960 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.4 pTM=0.36 ipTM=0.2 tol=5.64 2024-12-10 01:47:34,506 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.6 pTM=0.365 ipTM=0.171 tol=15.3 2024-12-10 01:48:05,020 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.5 pTM=0.352 ipTM=0.165 tol=6.62 2024-12-10 01:48:35,576 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.7 pTM=0.357 ipTM=0.281 tol=16.4 2024-12-10 01:49:06,143 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68 pTM=0.369 ipTM=0.19 tol=6.46 2024-12-10 01:49:36,733 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.7 pTM=0.366 ipTM=0.172 tol=15.5 2024-12-10 01:50:07,269 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.9 pTM=0.355 ipTM=0.266 tol=7.45 2024-12-10 01:50:37,848 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.2 pTM=0.358 ipTM=0.319 tol=14.1 2024-12-10 01:51:08,382 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.4 pTM=0.375 ipTM=0.153 tol=14.8 2024-12-10 01:51:38,960 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68 pTM=0.362 ipTM=0.159 tol=9.12 2024-12-10 01:52:09,464 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.9 pTM=0.358 ipTM=0.248 tol=5.54 2024-12-10 01:52:40,038 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.6 pTM=0.356 ipTM=0.305 tol=16.9 2024-12-10 01:53:10,579 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.9 pTM=0.384 ipTM=0.153 tol=17.3 2024-12-10 01:53:41,038 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.1 pTM=0.381 ipTM=0.145 tol=5.71 2024-12-10 01:54:11,482 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.8 pTM=0.375 ipTM=0.145 tol=2.9 2024-12-10 01:54:42,023 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.9 pTM=0.376 ipTM=0.146 tol=7.32 2024-12-10 01:55:12,512 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.4 pTM=0.394 ipTM=0.146 tol=4.81 2024-12-10 01:55:43,012 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.8 pTM=0.377 ipTM=0.147 tol=2.46 2024-12-10 01:56:13,540 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.1 pTM=0.38 ipTM=0.146 tol=2.21 2024-12-10 01:56:44,055 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.1 pTM=0.382 ipTM=0.146 tol=2.68 2024-12-10 01:57:14,577 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.385 ipTM=0.145 tol=2.74 2024-12-10 01:57:14,578 alphafold2_multimer_v3_model_2_seed_000 took 946.5s (30 recycles) 2024-12-10 01:57:45,992 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.4 pTM=0.393 ipTM=0.132 2024-12-10 01:58:16,522 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.7 pTM=0.394 ipTM=0.142 tol=17.2 2024-12-10 01:58:47,096 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.6 pTM=0.383 ipTM=0.134 tol=12.2 2024-12-10 01:59:17,645 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.5 pTM=0.372 ipTM=0.146 tol=9.19 2024-12-10 01:59:48,199 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66 pTM=0.36 ipTM=0.141 tol=7.84 2024-12-10 02:00:18,745 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.2 pTM=0.361 ipTM=0.139 tol=7.05 2024-12-10 02:00:49,308 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.4 pTM=0.362 ipTM=0.143 tol=4.46 2024-12-10 02:01:19,854 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.3 pTM=0.355 ipTM=0.141 tol=3.12 2024-12-10 02:01:50,415 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66 pTM=0.35 ipTM=0.137 tol=6.29 2024-12-10 02:02:20,976 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66 pTM=0.355 ipTM=0.138 tol=2.95 2024-12-10 02:02:51,575 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.4 pTM=0.355 ipTM=0.136 tol=3.61 2024-12-10 02:03:22,134 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.3 pTM=0.354 ipTM=0.14 tol=3.09 2024-12-10 02:03:52,722 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.3 pTM=0.355 ipTM=0.14 tol=2.27 2024-12-10 02:04:23,278 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.357 ipTM=0.143 tol=2.44 2024-12-10 02:04:53,824 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.1 pTM=0.354 ipTM=0.137 tol=2.67 2024-12-10 02:05:24,397 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.1 pTM=0.356 ipTM=0.142 tol=2.73 2024-12-10 02:05:54,977 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.2 pTM=0.36 ipTM=0.139 tol=12.9 2024-12-10 02:06:25,522 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.8 pTM=0.354 ipTM=0.145 tol=5.2 2024-12-10 02:06:56,086 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.9 pTM=0.354 ipTM=0.142 tol=2.88 2024-12-10 02:07:26,718 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.9 pTM=0.37 ipTM=0.14 tol=15.1 2024-12-10 02:07:57,255 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67 pTM=0.401 ipTM=0.151 tol=5.07 2024-12-10 02:08:27,776 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.4 pTM=0.408 ipTM=0.145 tol=6.73 2024-12-10 02:08:58,333 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.2 pTM=0.403 ipTM=0.139 tol=3.9 2024-12-10 02:09:28,908 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.5 pTM=0.404 ipTM=0.138 tol=5.07 2024-12-10 02:09:59,451 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67 pTM=0.396 ipTM=0.134 tol=5.08 2024-12-10 02:10:30,035 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.2 pTM=0.398 ipTM=0.135 tol=4.94 2024-12-10 02:11:00,567 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.3 pTM=0.399 ipTM=0.136 tol=5.04 2024-12-10 02:11:31,028 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.4 pTM=0.414 ipTM=0.169 tol=13.9 2024-12-10 02:12:01,493 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.7 pTM=0.413 ipTM=0.165 tol=4.15 2024-12-10 02:12:31,959 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.7 pTM=0.419 ipTM=0.172 tol=4.02 2024-12-10 02:13:02,397 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.9 pTM=0.414 ipTM=0.158 tol=4.75 2024-12-10 02:13:02,398 alphafold2_multimer_v3_model_3_seed_000 took 947.0s (30 recycles) 2024-12-10 02:13:33,807 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65 pTM=0.396 ipTM=0.142 2024-12-10 02:14:04,337 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.9 pTM=0.366 ipTM=0.151 tol=24.6 2024-12-10 02:14:34,848 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.7 pTM=0.352 ipTM=0.151 tol=17.8 2024-12-10 02:15:05,332 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.8 pTM=0.349 ipTM=0.156 tol=9.07 2024-12-10 02:15:35,781 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.3 pTM=0.346 ipTM=0.156 tol=5.05 2024-12-10 02:16:06,280 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.4 pTM=0.343 ipTM=0.156 tol=4.69 2024-12-10 02:16:36,788 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.2 pTM=0.359 ipTM=0.157 tol=5.73 2024-12-10 02:17:07,334 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.5 pTM=0.355 ipTM=0.141 tol=6.75 2024-12-10 02:17:37,957 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.8 pTM=0.354 ipTM=0.187 tol=19.2 2024-12-10 02:18:08,515 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.1 pTM=0.354 ipTM=0.224 tol=9.79 2024-12-10 02:18:39,020 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.2 pTM=0.359 ipTM=0.224 tol=9.34 2024-12-10 02:19:09,585 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.6 pTM=0.356 ipTM=0.223 tol=4.15 2024-12-10 02:19:40,146 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.3 pTM=0.359 ipTM=0.224 tol=5.47 2024-12-10 02:20:10,765 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.7 pTM=0.357 ipTM=0.192 tol=4.94 2024-12-10 02:20:41,386 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.1 pTM=0.359 ipTM=0.158 tol=6.47 2024-12-10 02:21:11,990 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.1 pTM=0.353 ipTM=0.15 tol=4.52 2024-12-10 02:21:42,623 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.1 pTM=0.362 ipTM=0.159 tol=3.98 2024-12-10 02:22:13,232 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.4 pTM=0.355 ipTM=0.176 tol=9.48 2024-12-10 02:22:43,757 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.1 pTM=0.359 ipTM=0.268 tol=6.18 2024-12-10 02:23:14,320 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.4 pTM=0.354 ipTM=0.277 tol=5.54 2024-12-10 02:23:44,833 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.1 pTM=0.356 ipTM=0.278 tol=5.68 2024-12-10 02:24:15,329 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.7 pTM=0.358 ipTM=0.288 tol=3.38 2024-12-10 02:24:45,790 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.361 ipTM=0.275 tol=2.2 2024-12-10 02:25:16,285 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.2 pTM=0.355 ipTM=0.268 tol=2.22 2024-12-10 02:25:46,812 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.2 pTM=0.358 ipTM=0.283 tol=3.91 2024-12-10 02:26:17,332 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.8 pTM=0.358 ipTM=0.301 tol=2.81 2024-12-10 02:26:47,875 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.2 pTM=0.36 ipTM=0.25 tol=2.44 2024-12-10 02:27:18,394 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.2 pTM=0.355 ipTM=0.242 tol=2.39 2024-12-10 02:27:48,899 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.1 pTM=0.36 ipTM=0.215 tol=3.33 2024-12-10 02:28:19,396 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.6 pTM=0.356 ipTM=0.189 tol=4.02 2024-12-10 02:28:49,881 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.9 pTM=0.354 ipTM=0.231 tol=2.61 2024-12-10 02:28:49,882 alphafold2_multimer_v3_model_4_seed_000 took 946.7s (30 recycles) 2024-12-10 02:29:21,254 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65 pTM=0.394 ipTM=0.131 2024-12-10 02:29:51,840 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.5 pTM=0.389 ipTM=0.141 tol=12.6 2024-12-10 02:30:22,410 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.2 pTM=0.374 ipTM=0.144 tol=4.81 2024-12-10 02:30:52,923 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.4 pTM=0.363 ipTM=0.149 tol=5.02 2024-12-10 02:31:23,487 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.4 pTM=0.36 ipTM=0.152 tol=3.78 2024-12-10 02:31:53,969 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.4 pTM=0.354 ipTM=0.156 tol=3.87 2024-12-10 02:32:24,421 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.6 pTM=0.355 ipTM=0.152 tol=2.38 2024-12-10 02:32:54,881 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.9 pTM=0.354 ipTM=0.159 tol=3.17 2024-12-10 02:33:25,319 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.7 pTM=0.355 ipTM=0.159 tol=5.27 2024-12-10 02:33:55,755 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.9 pTM=0.356 ipTM=0.159 tol=3.54 2024-12-10 02:34:26,233 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67 pTM=0.356 ipTM=0.155 tol=4.17 2024-12-10 02:34:56,732 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67 pTM=0.355 ipTM=0.156 tol=6.34 2024-12-10 02:35:27,224 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.1 pTM=0.353 ipTM=0.156 tol=3.5 2024-12-10 02:35:57,726 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.357 ipTM=0.158 tol=4.12 2024-12-10 02:36:28,245 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.4 pTM=0.356 ipTM=0.159 tol=2.64 2024-12-10 02:36:58,773 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.1 pTM=0.354 ipTM=0.16 tol=4.43 2024-12-10 02:37:29,307 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.1 pTM=0.356 ipTM=0.16 tol=3.71 2024-12-10 02:37:59,855 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.2 pTM=0.356 ipTM=0.161 tol=3.38 2024-12-10 02:38:30,417 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.9 pTM=0.352 ipTM=0.159 tol=2.22 2024-12-10 02:39:00,936 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67 pTM=0.353 ipTM=0.161 tol=3.27 2024-12-10 02:39:31,435 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.9 pTM=0.352 ipTM=0.165 tol=3.45 2024-12-10 02:40:01,941 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.1 pTM=0.354 ipTM=0.162 tol=4.03 2024-12-10 02:40:32,467 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.2 pTM=0.358 ipTM=0.164 tol=3.5 2024-12-10 02:41:02,962 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.8 pTM=0.355 ipTM=0.162 tol=4.92 2024-12-10 02:41:33,542 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.6 pTM=0.354 ipTM=0.157 tol=2.3 2024-12-10 02:42:04,059 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.6 pTM=0.353 ipTM=0.16 tol=6.7 2024-12-10 02:42:34,604 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.8 pTM=0.352 ipTM=0.162 tol=7.16 2024-12-10 02:43:05,147 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.6 pTM=0.353 ipTM=0.157 tol=4.88 2024-12-10 02:43:35,719 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.7 pTM=0.353 ipTM=0.157 tol=5.03 2024-12-10 02:44:06,295 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.9 pTM=0.352 ipTM=0.156 tol=2.01 2024-12-10 02:44:36,835 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.7 pTM=0.353 ipTM=0.158 tol=4.76 2024-12-10 02:44:36,836 alphafold2_multimer_v3_model_5_seed_000 took 946.2s (30 recycles) 2024-12-10 02:44:37,631 reranking models by 'multimer' metric 2024-12-10 02:44:41,195 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 02:46:10,965 Relaxation took 93.3s 2024-12-10 02:46:10,965 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.9 pTM=0.354 ipTM=0.231 2024-12-10 02:47:33,685 Relaxation took 82.7s 2024-12-10 02:47:33,685 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.9 pTM=0.414 ipTM=0.158 2024-12-10 02:50:15,126 Relaxation took 161.4s 2024-12-10 02:50:15,126 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.7 pTM=0.353 ipTM=0.158 2024-12-10 02:51:57,593 Relaxation took 102.5s 2024-12-10 02:51:57,593 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.2 pTM=0.361 ipTM=0.156 2024-12-10 02:53:22,425 Relaxation took 84.8s 2024-12-10 02:53:22,425 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.385 ipTM=0.145 2024-12-10 02:53:24,678 Done