2024-12-10 01:39:08,414 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-10 01:39:08,742 Running on GPU 2024-12-10 01:39:13,085 Found 6 citations for tools or databases 2024-12-10 01:39:13,085 Query 1/1: WWP2_POLR2G (length 1042) 2024-12-10 01:39:13,479 Sleeping for 8s. Reason: PENDING 2024-12-10 01:39:21,738 Sleeping for 8s. Reason: PENDING 2024-12-10 01:39:29,991 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:39:40,248 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:39:49,504 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:39:59,762 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:40:07,018 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:40:15,274 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:40:25,537 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:40:30,792 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:40:37,048 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:40:42,300 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:40:48,554 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:40:54,814 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:41:02,071 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:41:08,330 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:41:16,589 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:41:24,842 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:41:36,982 Sleeping for 9s. Reason: PENDING 2024-12-10 01:41:46,241 Sleeping for 8s. Reason: PENDING 2024-12-10 01:41:54,503 Sleeping for 8s. Reason: PENDING 2024-12-10 01:42:02,760 Sleeping for 8s. Reason: PENDING 2024-12-10 01:42:11,020 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:42:18,279 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:42:26,534 Sleeping for 7s. Reason: RUNNING 2024-12-10 01:42:33,785 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:42:43,044 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:42:48,296 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:42:54,568 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:42:59,822 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:43:08,076 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:43:18,338 Sleeping for 10s. Reason: RUNNING 2024-12-10 01:43:28,597 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:43:33,855 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:43:42,110 Sleeping for 6s. Reason: RUNNING 2024-12-10 01:43:48,370 Sleeping for 8s. Reason: RUNNING 2024-12-10 01:43:56,629 Sleeping for 9s. Reason: RUNNING 2024-12-10 01:44:05,889 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:44:11,147 Sleeping for 5s. Reason: RUNNING 2024-12-10 01:44:21,166 Setting max_seq=508, max_extra_seq=2048 2024-12-10 01:47:09,944 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.7 pTM=0.38 ipTM=0.168 2024-12-10 01:47:33,419 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.7 pTM=0.373 ipTM=0.163 tol=15.7 2024-12-10 01:47:57,007 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.4 pTM=0.415 ipTM=0.171 tol=19.1 2024-12-10 01:48:20,621 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.403 ipTM=0.182 tol=7.49 2024-12-10 01:48:44,300 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.2 pTM=0.398 ipTM=0.172 tol=3.08 2024-12-10 01:49:08,012 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.7 pTM=0.391 ipTM=0.171 tol=3.6 2024-12-10 01:49:31,780 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.4 pTM=0.389 ipTM=0.162 tol=10.4 2024-12-10 01:49:55,549 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64 pTM=0.382 ipTM=0.161 tol=6.79 2024-12-10 01:50:19,333 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=63.5 pTM=0.41 ipTM=0.176 tol=9.55 2024-12-10 01:50:43,081 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=63.2 pTM=0.393 ipTM=0.173 tol=3.79 2024-12-10 01:51:06,837 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=63.2 pTM=0.386 ipTM=0.168 tol=12 2024-12-10 01:51:30,589 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.5 pTM=0.38 ipTM=0.164 tol=3.9 2024-12-10 01:51:54,368 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.4 pTM=0.402 ipTM=0.168 tol=9.23 2024-12-10 01:52:18,147 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.5 pTM=0.394 ipTM=0.168 tol=3.89 2024-12-10 01:52:41,950 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.7 pTM=0.4 ipTM=0.18 tol=3.25 2024-12-10 01:53:05,763 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=63.8 pTM=0.4 ipTM=0.176 tol=2.67 2024-12-10 01:53:29,582 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=63.4 pTM=0.4 ipTM=0.196 tol=3.38 2024-12-10 01:53:53,392 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=63.7 pTM=0.402 ipTM=0.181 tol=3.19 2024-12-10 01:54:17,192 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.2 pTM=0.416 ipTM=0.179 tol=15 2024-12-10 01:54:40,995 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.1 pTM=0.443 ipTM=0.173 tol=9.03 2024-12-10 01:55:04,754 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63.6 pTM=0.44 ipTM=0.183 tol=4.6 2024-12-10 01:55:28,516 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=63.1 pTM=0.426 ipTM=0.175 tol=3.51 2024-12-10 01:55:52,283 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.2 pTM=0.434 ipTM=0.181 tol=2.71 2024-12-10 01:56:16,048 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.428 ipTM=0.181 tol=2.96 2024-12-10 01:56:39,816 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=63.5 pTM=0.437 ipTM=0.183 tol=2.67 2024-12-10 01:57:03,594 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=63.2 pTM=0.43 ipTM=0.178 tol=2.42 2024-12-10 01:57:27,369 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.6 pTM=0.44 ipTM=0.179 tol=1.76 2024-12-10 01:57:51,133 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.8 pTM=0.426 ipTM=0.172 tol=1.24 2024-12-10 01:58:14,912 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.9 pTM=0.432 ipTM=0.183 tol=3.2 2024-12-10 01:58:38,695 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.6 pTM=0.422 ipTM=0.171 tol=3.73 2024-12-10 01:59:02,462 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.2 pTM=0.433 ipTM=0.176 tol=2.83 2024-12-10 01:59:02,463 alphafold2_multimer_v3_model_1_seed_000 took 875.8s (30 recycles) 2024-12-10 01:59:26,923 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.9 pTM=0.455 ipTM=0.177 2024-12-10 01:59:50,728 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.2 pTM=0.428 ipTM=0.253 tol=8.2 2024-12-10 02:00:14,575 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66 pTM=0.401 ipTM=0.215 tol=8.26 2024-12-10 02:00:38,417 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66 pTM=0.402 ipTM=0.209 tol=4.38 2024-12-10 02:01:02,280 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.1 pTM=0.416 ipTM=0.233 tol=8.02 2024-12-10 02:01:26,129 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.5 pTM=0.421 ipTM=0.218 tol=2.14 2024-12-10 02:01:49,983 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.6 pTM=0.42 ipTM=0.236 tol=1.99 2024-12-10 02:02:13,843 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.8 pTM=0.407 ipTM=0.208 tol=1.63 2024-12-10 02:02:37,700 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.7 pTM=0.416 ipTM=0.229 tol=1.26 2024-12-10 02:03:01,562 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.2 pTM=0.4 ipTM=0.196 tol=1.77 2024-12-10 02:03:25,429 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.2 pTM=0.394 ipTM=0.194 tol=2.42 2024-12-10 02:03:49,285 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.6 pTM=0.411 ipTM=0.199 tol=5.42 2024-12-10 02:04:13,150 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.4 pTM=0.407 ipTM=0.21 tol=4.82 2024-12-10 02:04:37,005 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.3 pTM=0.41 ipTM=0.204 tol=1.11 2024-12-10 02:05:00,864 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.4 pTM=0.408 ipTM=0.216 tol=1.09 2024-12-10 02:05:24,739 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.2 pTM=0.409 ipTM=0.203 tol=1.34 2024-12-10 02:05:48,609 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.9 pTM=0.404 ipTM=0.206 tol=2.03 2024-12-10 02:06:12,484 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.2 pTM=0.409 ipTM=0.208 tol=1.81 2024-12-10 02:06:36,365 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.1 pTM=0.406 ipTM=0.188 tol=2.58 2024-12-10 02:07:00,250 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.4 pTM=0.411 ipTM=0.193 tol=5.55 2024-12-10 02:07:24,130 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.2 pTM=0.407 ipTM=0.212 tol=5.48 2024-12-10 02:07:48,007 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.9 pTM=0.418 ipTM=0.242 tol=2.92 2024-12-10 02:08:11,874 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.2 pTM=0.409 ipTM=0.21 tol=1.96 2024-12-10 02:08:35,724 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.4 pTM=0.412 ipTM=0.216 tol=1.56 2024-12-10 02:08:59,582 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.1 pTM=0.403 ipTM=0.212 tol=1.73 2024-12-10 02:09:23,442 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66 pTM=0.408 ipTM=0.197 tol=2.12 2024-12-10 02:09:47,317 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66 pTM=0.406 ipTM=0.188 tol=2.06 2024-12-10 02:10:11,219 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.406 ipTM=0.181 tol=2.87 2024-12-10 02:10:35,106 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.7 pTM=0.396 ipTM=0.181 tol=2.22 2024-12-10 02:10:58,984 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.7 pTM=0.404 ipTM=0.181 tol=3.08 2024-12-10 02:11:22,852 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.6 pTM=0.402 ipTM=0.183 tol=2.09 2024-12-10 02:11:22,853 alphafold2_multimer_v3_model_2_seed_000 took 739.7s (30 recycles) 2024-12-10 02:11:47,376 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.1 pTM=0.407 ipTM=0.344 2024-12-10 02:12:11,188 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.8 pTM=0.387 ipTM=0.179 tol=16 2024-12-10 02:12:35,032 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63 pTM=0.37 ipTM=0.209 tol=13.8 2024-12-10 02:12:58,907 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.1 pTM=0.406 ipTM=0.176 tol=13.3 2024-12-10 02:13:22,789 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.8 pTM=0.404 ipTM=0.186 tol=8.27 2024-12-10 02:13:46,664 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.8 pTM=0.41 ipTM=0.192 tol=10 2024-12-10 02:14:10,558 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.5 pTM=0.4 ipTM=0.173 tol=12.3 2024-12-10 02:14:34,415 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.9 pTM=0.413 ipTM=0.192 tol=7.73 2024-12-10 02:14:58,308 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.1 pTM=0.406 ipTM=0.186 tol=8.41 2024-12-10 02:15:22,180 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.7 pTM=0.411 ipTM=0.188 tol=4.59 2024-12-10 02:15:46,062 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.7 pTM=0.408 ipTM=0.186 tol=5 2024-12-10 02:16:09,907 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.4 pTM=0.406 ipTM=0.185 tol=8.56 2024-12-10 02:16:33,735 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.4 pTM=0.433 ipTM=0.185 tol=8.1 2024-12-10 02:16:57,576 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.4 pTM=0.453 ipTM=0.189 tol=5.21 2024-12-10 02:17:21,436 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.8 pTM=0.443 ipTM=0.181 tol=5.8 2024-12-10 02:17:45,296 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.9 pTM=0.444 ipTM=0.189 tol=5.25 2024-12-10 02:18:09,158 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.1 pTM=0.434 ipTM=0.175 tol=4.44 2024-12-10 02:18:32,978 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.8 pTM=0.46 ipTM=0.287 tol=5.62 2024-12-10 02:18:56,818 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.8 pTM=0.446 ipTM=0.198 tol=2.68 2024-12-10 02:19:20,678 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.4 pTM=0.45 ipTM=0.183 tol=2.47 2024-12-10 02:19:44,535 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.9 pTM=0.443 ipTM=0.182 tol=3.62 2024-12-10 02:20:08,365 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.4 pTM=0.453 ipTM=0.212 tol=4.77 2024-12-10 02:20:32,202 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.9 pTM=0.448 ipTM=0.206 tol=3.24 2024-12-10 02:20:56,045 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.8 pTM=0.453 ipTM=0.208 tol=4.27 2024-12-10 02:21:19,890 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.8 pTM=0.448 ipTM=0.208 tol=3.08 2024-12-10 02:21:43,725 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.6 pTM=0.455 ipTM=0.228 tol=2.4 2024-12-10 02:22:07,580 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.9 pTM=0.45 ipTM=0.216 tol=1.77 2024-12-10 02:22:31,437 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66 pTM=0.457 ipTM=0.219 tol=1.71 2024-12-10 02:22:55,339 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.1 pTM=0.449 ipTM=0.201 tol=2.73 2024-12-10 02:23:19,207 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.8 pTM=0.454 ipTM=0.238 tol=4 2024-12-10 02:23:43,096 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.8 pTM=0.446 ipTM=0.223 tol=2.4 2024-12-10 02:23:43,097 alphafold2_multimer_v3_model_3_seed_000 took 739.6s (30 recycles) 2024-12-10 02:24:07,623 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.1 pTM=0.473 ipTM=0.445 2024-12-10 02:24:31,537 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.418 ipTM=0.188 tol=19.4 2024-12-10 02:24:55,451 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.3 pTM=0.388 ipTM=0.179 tol=9.52 2024-12-10 02:25:19,357 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.9 pTM=0.438 ipTM=0.2 tol=10.5 2024-12-10 02:25:43,190 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.5 pTM=0.473 ipTM=0.193 tol=17.3 2024-12-10 02:26:07,048 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.5 pTM=0.455 ipTM=0.187 tol=6.34 2024-12-10 02:26:30,913 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.8 pTM=0.444 ipTM=0.19 tol=3.95 2024-12-10 02:26:54,753 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.5 pTM=0.445 ipTM=0.194 tol=2.08 2024-12-10 02:27:18,602 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.5 pTM=0.441 ipTM=0.194 tol=3.97 2024-12-10 02:27:42,437 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.4 pTM=0.443 ipTM=0.187 tol=3.4 2024-12-10 02:28:06,301 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.7 pTM=0.44 ipTM=0.182 tol=2.9 2024-12-10 02:28:30,160 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.6 pTM=0.439 ipTM=0.187 tol=2.88 2024-12-10 02:28:54,032 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.5 pTM=0.441 ipTM=0.198 tol=3.03 2024-12-10 02:29:17,885 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.5 pTM=0.445 ipTM=0.188 tol=3.19 2024-12-10 02:29:41,734 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62 pTM=0.447 ipTM=0.185 tol=1.85 2024-12-10 02:30:05,588 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.8 pTM=0.444 ipTM=0.186 tol=2.17 2024-12-10 02:30:29,430 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.2 pTM=0.446 ipTM=0.194 tol=2.94 2024-12-10 02:30:53,272 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.8 pTM=0.445 ipTM=0.188 tol=3.48 2024-12-10 02:31:17,122 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61 pTM=0.436 ipTM=0.187 tol=3.38 2024-12-10 02:31:40,960 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.5 pTM=0.447 ipTM=0.19 tol=2.47 2024-12-10 02:32:04,803 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.8 pTM=0.443 ipTM=0.186 tol=1.83 2024-12-10 02:32:28,638 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.5 pTM=0.445 ipTM=0.195 tol=1.38 2024-12-10 02:32:52,485 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.5 pTM=0.444 ipTM=0.192 tol=1.22 2024-12-10 02:33:16,319 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.1 pTM=0.442 ipTM=0.191 tol=3.26 2024-12-10 02:33:40,128 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.2 pTM=0.437 ipTM=0.195 tol=4.09 2024-12-10 02:34:03,947 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.9 pTM=0.448 ipTM=0.184 tol=4.55 2024-12-10 02:34:27,770 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.7 pTM=0.445 ipTM=0.186 tol=2.54 2024-12-10 02:34:51,592 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.2 pTM=0.438 ipTM=0.183 tol=2.84 2024-12-10 02:35:15,423 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.8 pTM=0.443 ipTM=0.189 tol=2.54 2024-12-10 02:35:39,229 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.3 pTM=0.438 ipTM=0.188 tol=2.69 2024-12-10 02:36:03,048 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.4 pTM=0.441 ipTM=0.185 tol=2.52 2024-12-10 02:36:03,049 alphafold2_multimer_v3_model_4_seed_000 took 739.3s (30 recycles) 2024-12-10 02:36:27,571 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.2 pTM=0.426 ipTM=0.183 2024-12-10 02:36:51,382 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.2 pTM=0.428 ipTM=0.161 tol=13.2 2024-12-10 02:37:15,202 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.4 pTM=0.394 ipTM=0.169 tol=7.97 2024-12-10 02:37:39,040 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.7 pTM=0.382 ipTM=0.173 tol=7.04 2024-12-10 02:38:02,913 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.2 pTM=0.376 ipTM=0.175 tol=9.16 2024-12-10 02:38:26,777 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=64.4 pTM=0.401 ipTM=0.186 tol=11.2 2024-12-10 02:38:50,595 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.4 pTM=0.44 ipTM=0.181 tol=9.34 2024-12-10 02:39:14,446 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.9 pTM=0.443 ipTM=0.17 tol=6.46 2024-12-10 02:39:38,333 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.9 pTM=0.441 ipTM=0.174 tol=4.11 2024-12-10 02:40:02,216 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.8 pTM=0.44 ipTM=0.187 tol=4.34 2024-12-10 02:40:26,075 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.439 ipTM=0.18 tol=4.25 2024-12-10 02:40:49,959 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.7 pTM=0.44 ipTM=0.186 tol=3.89 2024-12-10 02:41:13,811 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.8 pTM=0.44 ipTM=0.185 tol=3.03 2024-12-10 02:41:37,665 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66 pTM=0.444 ipTM=0.177 tol=2.33 2024-12-10 02:42:01,496 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66 pTM=0.442 ipTM=0.182 tol=1.83 2024-12-10 02:42:25,329 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.1 pTM=0.447 ipTM=0.177 tol=5.68 2024-12-10 02:42:49,164 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.8 pTM=0.44 ipTM=0.188 tol=3.5 2024-12-10 02:43:13,014 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.6 pTM=0.443 ipTM=0.187 tol=3.99 2024-12-10 02:43:36,868 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.9 pTM=0.439 ipTM=0.185 tol=4.56 2024-12-10 02:44:00,748 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.1 pTM=0.441 ipTM=0.178 tol=3.22 2024-12-10 02:44:24,620 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.7 pTM=0.437 ipTM=0.173 tol=2.54 2024-12-10 02:44:48,497 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.1 pTM=0.441 ipTM=0.179 tol=2.97 2024-12-10 02:45:12,367 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.9 pTM=0.44 ipTM=0.177 tol=2.2 2024-12-10 02:45:36,233 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.2 pTM=0.443 ipTM=0.181 tol=3.73 2024-12-10 02:46:00,088 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.8 pTM=0.44 ipTM=0.182 tol=3.37 2024-12-10 02:46:23,950 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66 pTM=0.444 ipTM=0.18 tol=1.93 2024-12-10 02:46:47,829 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66 pTM=0.439 ipTM=0.175 tol=1.87 2024-12-10 02:47:11,697 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.9 pTM=0.441 ipTM=0.185 tol=3.17 2024-12-10 02:47:35,570 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.8 pTM=0.438 ipTM=0.184 tol=2.82 2024-12-10 02:47:59,441 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.5 pTM=0.442 ipTM=0.186 tol=2.35 2024-12-10 02:48:23,332 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.2 pTM=0.442 ipTM=0.177 tol=2.45 2024-12-10 02:48:23,333 alphafold2_multimer_v3_model_5_seed_000 took 739.6s (30 recycles) 2024-12-10 02:48:24,010 reranking models by 'multimer' metric 2024-12-10 02:48:25,031 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-10 02:49:38,372 Relaxation took 74.4s 2024-12-10 02:49:38,372 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.8 pTM=0.446 ipTM=0.223 2024-12-10 02:51:02,394 Relaxation took 84.0s 2024-12-10 02:51:02,394 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.4 pTM=0.441 ipTM=0.185 2024-12-10 02:52:19,827 Relaxation took 77.4s 2024-12-10 02:52:19,827 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.2 pTM=0.442 ipTM=0.177 2024-12-10 02:53:32,470 Relaxation took 72.6s 2024-12-10 02:53:32,470 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.2 pTM=0.433 ipTM=0.176 2024-12-10 02:55:00,384 Relaxation took 87.9s 2024-12-10 02:55:00,384 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.6 pTM=0.402 ipTM=0.183 2024-12-10 02:55:02,443 Done