2024-12-10 01:43:25,623 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-10 01:43:25,969 Running on GPU
2024-12-10 01:43:30,193 Found 6 citations for tools or databases
2024-12-10 01:43:30,193 Query 1/1: WWP2_POLR2J (length 987)
2024-12-10 01:43:30,476 Sleeping for 6s. Reason: PENDING
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2024-12-10 01:43:44,991 Sleeping for 8s. Reason: RUNNING
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2024-12-10 01:44:39,196 Sleeping for 7s. Reason: RUNNING
2024-12-10 01:44:46,451 Sleeping for 10s. Reason: RUNNING
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2024-12-10 01:45:27,487 Sleeping for 6s. Reason: RUNNING
2024-12-10 01:45:33,751 Sleeping for 10s. Reason: RUNNING
2024-12-10 01:45:45,110 Sleeping for 7s. Reason: PENDING
2024-12-10 01:45:52,363 Sleeping for 7s. Reason: RUNNING
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2024-12-10 01:46:26,396 Sleeping for 8s. Reason: RUNNING
2024-12-10 01:46:34,649 Sleeping for 7s. Reason: RUNNING
2024-12-10 01:46:41,913 Sleeping for 8s. Reason: RUNNING
2024-12-10 01:46:50,173 Sleeping for 5s. Reason: RUNNING
2024-12-10 01:46:55,433 Sleeping for 9s. Reason: RUNNING
2024-12-10 01:47:04,694 Sleeping for 7s. Reason: RUNNING
2024-12-10 01:47:11,957 Sleeping for 5s. Reason: RUNNING
2024-12-10 01:47:17,214 Sleeping for 8s. Reason: RUNNING
2024-12-10 01:47:25,483 Sleeping for 10s. Reason: RUNNING
2024-12-10 01:47:35,743 Sleeping for 9s. Reason: RUNNING
2024-12-10 01:47:45,001 Sleeping for 10s. Reason: RUNNING
2024-12-10 01:48:00,210 Setting max_seq=508, max_extra_seq=2048
2024-12-10 01:50:55,092 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.8 pTM=0.406 ipTM=0.173
2024-12-10 01:51:15,839 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.2 pTM=0.412 ipTM=0.186 tol=15.2
2024-12-10 01:51:36,649 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.3 pTM=0.425 ipTM=0.193 tol=18
2024-12-10 01:51:57,507 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.2 pTM=0.462 ipTM=0.223 tol=5.1
2024-12-10 01:52:18,420 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.3 pTM=0.445 ipTM=0.195 tol=4.89
2024-12-10 01:52:39,362 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.8 pTM=0.448 ipTM=0.183 tol=3.92
2024-12-10 01:53:00,324 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.4 pTM=0.443 ipTM=0.187 tol=4.22
2024-12-10 01:53:21,314 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.9 pTM=0.447 ipTM=0.177 tol=2.35
2024-12-10 01:53:42,305 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.3 pTM=0.443 ipTM=0.208 tol=2.36
2024-12-10 01:54:03,299 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.5 pTM=0.447 ipTM=0.194 tol=2.33
2024-12-10 01:54:24,311 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.4 pTM=0.442 ipTM=0.202 tol=1.6
2024-12-10 01:54:45,321 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.6 pTM=0.446 ipTM=0.193 tol=2.03
2024-12-10 01:55:06,329 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.7 pTM=0.436 ipTM=0.213 tol=1.11
2024-12-10 01:55:27,336 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.9 pTM=0.45 ipTM=0.199 tol=1.68
2024-12-10 01:55:48,345 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.1 pTM=0.438 ipTM=0.191 tol=1.32
2024-12-10 01:56:09,355 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.9 pTM=0.449 ipTM=0.183 tol=1.06
2024-12-10 01:56:30,370 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.8 pTM=0.437 ipTM=0.192 tol=1.79
2024-12-10 01:56:51,384 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.1 pTM=0.443 ipTM=0.191 tol=1.8
2024-12-10 01:57:12,410 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.2 pTM=0.444 ipTM=0.192 tol=1.2
2024-12-10 01:57:33,422 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.8 pTM=0.446 ipTM=0.183 tol=1.05
2024-12-10 01:57:54,438 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=63 pTM=0.451 ipTM=0.24 tol=1.65
2024-12-10 01:58:15,452 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.5 pTM=0.449 ipTM=0.212 tol=1.13
2024-12-10 01:58:36,473 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.8 pTM=0.439 ipTM=0.197 tol=1.24
2024-12-10 01:58:57,493 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.2 pTM=0.456 ipTM=0.198 tol=1.06
2024-12-10 01:59:18,495 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.2 pTM=0.448 ipTM=0.245 tol=1.47
2024-12-10 01:59:39,499 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.4 pTM=0.448 ipTM=0.211 tol=1.05
2024-12-10 02:00:00,511 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.9 pTM=0.449 ipTM=0.2 tol=1.06
2024-12-10 02:00:21,517 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62 pTM=0.442 ipTM=0.196 tol=0.816
2024-12-10 02:00:42,527 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.5 pTM=0.434 ipTM=0.211 tol=1.07
2024-12-10 02:01:03,529 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.8 pTM=0.452 ipTM=0.208 tol=1.17
2024-12-10 02:01:24,532 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62 pTM=0.441 ipTM=0.201 tol=1.29
2024-12-10 02:01:24,533 alphafold2_multimer_v3_model_1_seed_000 took 800.8s (30 recycles)
2024-12-10 02:01:46,175 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.6 pTM=0.466 ipTM=0.16
2024-12-10 02:02:07,187 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.6 pTM=0.402 ipTM=0.173 tol=7.26
2024-12-10 02:02:28,236 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.2 pTM=0.421 ipTM=0.191 tol=17.2
2024-12-10 02:02:49,278 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.1 pTM=0.415 ipTM=0.201 tol=7.8
2024-12-10 02:03:10,333 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.4 pTM=0.417 ipTM=0.228 tol=12.3
2024-12-10 02:03:31,379 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.9 pTM=0.414 ipTM=0.223 tol=6.3
2024-12-10 02:03:52,435 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.8 pTM=0.427 ipTM=0.212 tol=10.2
2024-12-10 02:04:13,470 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.6 pTM=0.414 ipTM=0.207 tol=4.21
2024-12-10 02:04:34,519 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.8 pTM=0.418 ipTM=0.211 tol=9.6
2024-12-10 02:04:55,561 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.1 pTM=0.416 ipTM=0.216 tol=2.92
2024-12-10 02:05:16,603 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.1 pTM=0.421 ipTM=0.257 tol=5.04
2024-12-10 02:05:37,659 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.9 pTM=0.413 ipTM=0.239 tol=3.14
2024-12-10 02:05:58,743 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.6 pTM=0.415 ipTM=0.223 tol=7.58
2024-12-10 02:06:19,795 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.1 pTM=0.421 ipTM=0.231 tol=3.64
2024-12-10 02:06:40,861 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.4 pTM=0.429 ipTM=0.243 tol=7.25
2024-12-10 02:07:01,923 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.422 ipTM=0.243 tol=4.3
2024-12-10 02:07:22,976 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.426 ipTM=0.238 tol=1.94
2024-12-10 02:07:44,033 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.1 pTM=0.417 ipTM=0.251 tol=1.73
2024-12-10 02:08:05,068 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.6 pTM=0.418 ipTM=0.234 tol=5.17
2024-12-10 02:08:26,124 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.3 pTM=0.417 ipTM=0.247 tol=3.33
2024-12-10 02:08:47,158 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.1 pTM=0.416 ipTM=0.274 tol=3.83
2024-12-10 02:09:08,205 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.9 pTM=0.421 ipTM=0.255 tol=4.96
2024-12-10 02:09:29,263 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.4 pTM=0.42 ipTM=0.247 tol=3.16
2024-12-10 02:09:50,306 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65 pTM=0.412 ipTM=0.288 tol=2.29
2024-12-10 02:10:11,368 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.9 pTM=0.422 ipTM=0.233 tol=3.26
2024-12-10 02:10:32,436 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65 pTM=0.415 ipTM=0.248 tol=1.86
2024-12-10 02:10:53,477 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.2 pTM=0.419 ipTM=0.261 tol=2.14
2024-12-10 02:11:14,524 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.5 pTM=0.41 ipTM=0.227 tol=3.44
2024-12-10 02:11:35,583 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.6 pTM=0.428 ipTM=0.231 tol=9.51
2024-12-10 02:11:56,645 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.9 pTM=0.408 ipTM=0.22 tol=2.11
2024-12-10 02:12:17,684 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.5 pTM=0.433 ipTM=0.21 tol=9.46
2024-12-10 02:12:17,685 alphafold2_multimer_v3_model_2_seed_000 took 652.5s (30 recycles)
2024-12-10 02:12:39,379 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.4 pTM=0.448 ipTM=0.175
2024-12-10 02:13:00,379 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.3 pTM=0.404 ipTM=0.236 tol=12.4
2024-12-10 02:13:21,430 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.7 pTM=0.447 ipTM=0.463 tol=11.6
2024-12-10 02:13:42,461 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.8 pTM=0.403 ipTM=0.238 tol=10.5
2024-12-10 02:14:03,515 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.7 pTM=0.407 ipTM=0.251 tol=11.5
2024-12-10 02:14:24,549 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.7 pTM=0.401 ipTM=0.285 tol=5.04
2024-12-10 02:14:45,582 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63 pTM=0.417 ipTM=0.225 tol=7.88
2024-12-10 02:15:06,609 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.9 pTM=0.406 ipTM=0.24 tol=4.59
2024-12-10 02:15:27,649 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.8 pTM=0.395 ipTM=0.221 tol=8.41
2024-12-10 02:15:48,668 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.1 pTM=0.408 ipTM=0.35 tol=4.28
2024-12-10 02:16:09,711 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.2 pTM=0.433 ipTM=0.267 tol=8.48
2024-12-10 02:16:30,750 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.7 pTM=0.407 ipTM=0.228 tol=3.64
2024-12-10 02:16:51,820 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.5 pTM=0.401 ipTM=0.258 tol=7.44
2024-12-10 02:17:12,890 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.8 pTM=0.396 ipTM=0.227 tol=3.02
2024-12-10 02:17:33,956 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63 pTM=0.421 ipTM=0.247 tol=10.7
2024-12-10 02:17:55,013 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.7 pTM=0.409 ipTM=0.214 tol=5.76
2024-12-10 02:18:16,088 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.7 pTM=0.402 ipTM=0.218 tol=9.66
2024-12-10 02:18:37,162 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.5 pTM=0.394 ipTM=0.214 tol=5.96
2024-12-10 02:18:58,243 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.2 pTM=0.418 ipTM=0.226 tol=10.1
2024-12-10 02:19:19,266 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.4 pTM=0.417 ipTM=0.273 tol=15.1
2024-12-10 02:19:40,276 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.8 pTM=0.486 ipTM=0.299 tol=8.2
2024-12-10 02:20:01,284 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.5 pTM=0.484 ipTM=0.316 tol=6.41
2024-12-10 02:20:22,291 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.4 pTM=0.48 ipTM=0.29 tol=3.14
2024-12-10 02:20:43,287 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.1 pTM=0.487 ipTM=0.338 tol=3.4
2024-12-10 02:21:04,290 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.7 pTM=0.482 ipTM=0.294 tol=2.92
2024-12-10 02:21:25,292 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.8 pTM=0.485 ipTM=0.33 tol=2.89
2024-12-10 02:21:46,317 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64 pTM=0.488 ipTM=0.293 tol=2.04
2024-12-10 02:22:07,346 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.8 pTM=0.483 ipTM=0.298 tol=2.21
2024-12-10 02:22:28,380 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.9 pTM=0.49 ipTM=0.315 tol=2.21
2024-12-10 02:22:49,432 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.3 pTM=0.495 ipTM=0.335 tol=2.16
2024-12-10 02:23:10,495 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64 pTM=0.489 ipTM=0.316 tol=3.37
2024-12-10 02:23:10,497 alphafold2_multimer_v3_model_3_seed_000 took 652.2s (30 recycles)
2024-12-10 02:23:32,193 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.8 pTM=0.463 ipTM=0.449
2024-12-10 02:23:53,256 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.1 pTM=0.418 ipTM=0.31 tol=15.3
2024-12-10 02:24:14,374 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.8 pTM=0.404 ipTM=0.254 tol=15.6
2024-12-10 02:24:35,482 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.4 pTM=0.46 ipTM=0.346 tol=7.55
2024-12-10 02:24:56,526 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.7 pTM=0.482 ipTM=0.225 tol=17.5
2024-12-10 02:25:17,575 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.7 pTM=0.479 ipTM=0.251 tol=6.31
2024-12-10 02:25:38,624 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.5 pTM=0.471 ipTM=0.239 tol=2.07
2024-12-10 02:25:59,681 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.3 pTM=0.469 ipTM=0.242 tol=2.23
2024-12-10 02:26:20,743 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.2 pTM=0.471 ipTM=0.247 tol=1.25
2024-12-10 02:26:41,787 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.2 pTM=0.469 ipTM=0.237 tol=1.18
2024-12-10 02:27:02,830 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.9 pTM=0.464 ipTM=0.239 tol=1.86
2024-12-10 02:27:23,866 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.8 pTM=0.468 ipTM=0.243 tol=2.44
2024-12-10 02:27:44,902 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.9 pTM=0.47 ipTM=0.245 tol=1.41
2024-12-10 02:28:05,964 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.4 pTM=0.481 ipTM=0.278 tol=1.72
2024-12-10 02:28:27,024 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.1 pTM=0.471 ipTM=0.281 tol=2.4
2024-12-10 02:28:48,075 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.2 pTM=0.477 ipTM=0.258 tol=1.49
2024-12-10 02:29:09,135 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.4 pTM=0.464 ipTM=0.263 tol=1.96
2024-12-10 02:29:30,181 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.1 pTM=0.478 ipTM=0.261 tol=1.19
2024-12-10 02:29:51,216 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.5 pTM=0.468 ipTM=0.252 tol=0.876
2024-12-10 02:30:12,256 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.2 pTM=0.475 ipTM=0.246 tol=2.06
2024-12-10 02:30:33,288 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.6 pTM=0.468 ipTM=0.244 tol=1.36
2024-12-10 02:30:54,335 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.2 pTM=0.475 ipTM=0.243 tol=1.38
2024-12-10 02:31:15,374 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.1 pTM=0.476 ipTM=0.254 tol=1.12
2024-12-10 02:31:36,408 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61.3 pTM=0.474 ipTM=0.246 tol=2.57
2024-12-10 02:31:57,444 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.7 pTM=0.47 ipTM=0.252 tol=2.34
2024-12-10 02:32:18,487 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.8 pTM=0.469 ipTM=0.239 tol=1.67
2024-12-10 02:32:39,526 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.9 pTM=0.469 ipTM=0.247 tol=1.61
2024-12-10 02:33:00,565 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.2 pTM=0.475 ipTM=0.252 tol=1.68
2024-12-10 02:33:21,589 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.5 pTM=0.469 ipTM=0.266 tol=0.989
2024-12-10 02:33:42,606 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.8 pTM=0.471 ipTM=0.258 tol=1.04
2024-12-10 02:34:03,616 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.8 pTM=0.471 ipTM=0.264 tol=1.07
2024-12-10 02:34:03,617 alphafold2_multimer_v3_model_4_seed_000 took 652.5s (30 recycles)
2024-12-10 02:34:25,325 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.3 pTM=0.464 ipTM=0.182
2024-12-10 02:34:46,377 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.7 pTM=0.427 ipTM=0.194 tol=10.9
2024-12-10 02:35:07,431 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.5 pTM=0.404 ipTM=0.217 tol=9.87
2024-12-10 02:35:28,482 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.3 pTM=0.395 ipTM=0.238 tol=12.6
2024-12-10 02:35:49,526 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.8 pTM=0.384 ipTM=0.197 tol=13
2024-12-10 02:36:10,577 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.9 pTM=0.47 ipTM=0.215 tol=11.9
2024-12-10 02:36:31,613 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.1 pTM=0.46 ipTM=0.222 tol=7.03
2024-12-10 02:36:52,629 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.7 pTM=0.467 ipTM=0.218 tol=5.02
2024-12-10 02:37:13,640 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63 pTM=0.457 ipTM=0.232 tol=4.13
2024-12-10 02:37:34,655 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.8 pTM=0.472 ipTM=0.237 tol=5.32
2024-12-10 02:37:55,656 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.9 pTM=0.455 ipTM=0.226 tol=3.5
2024-12-10 02:38:16,676 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.2 pTM=0.462 ipTM=0.218 tol=5.52
2024-12-10 02:38:37,700 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.1 pTM=0.453 ipTM=0.227 tol=2.62
2024-12-10 02:38:58,723 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64 pTM=0.466 ipTM=0.226 tol=3.78
2024-12-10 02:39:19,758 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.1 pTM=0.45 ipTM=0.231 tol=3.79
2024-12-10 02:39:40,806 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.6 pTM=0.46 ipTM=0.209 tol=2.67
2024-12-10 02:40:01,844 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.1 pTM=0.446 ipTM=0.237 tol=1.66
2024-12-10 02:40:22,887 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.9 pTM=0.466 ipTM=0.248 tol=3.85
2024-12-10 02:40:43,953 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.9 pTM=0.449 ipTM=0.204 tol=4.72
2024-12-10 02:41:05,000 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.9 pTM=0.463 ipTM=0.196 tol=4.55
2024-12-10 02:41:26,025 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63 pTM=0.447 ipTM=0.255 tol=4.79
2024-12-10 02:41:47,043 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.5 pTM=0.459 ipTM=0.233 tol=3.95
2024-12-10 02:42:08,072 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.2 pTM=0.453 ipTM=0.199 tol=4.48
2024-12-10 02:42:29,104 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.9 pTM=0.466 ipTM=0.198 tol=3.44
2024-12-10 02:42:50,124 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63 pTM=0.445 ipTM=0.212 tol=5.22
2024-12-10 02:43:11,152 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.9 pTM=0.463 ipTM=0.203 tol=5.21
2024-12-10 02:43:32,186 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.2 pTM=0.451 ipTM=0.207 tol=5.25
2024-12-10 02:43:53,230 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.7 pTM=0.46 ipTM=0.2 tol=4.29
2024-12-10 02:44:14,265 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.5 pTM=0.443 ipTM=0.215 tol=3.67
2024-12-10 02:44:35,315 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.5 pTM=0.456 ipTM=0.211 tol=2.43
2024-12-10 02:44:56,338 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63 pTM=0.448 ipTM=0.241 tol=2.71
2024-12-10 02:44:56,339 alphafold2_multimer_v3_model_5_seed_000 took 652.1s (30 recycles)
2024-12-10 02:44:56,940 reranking models by 'multimer' metric
2024-12-10 02:44:57,940 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-10 02:46:56,800 Relaxation took 119.9s
2024-12-10 02:46:56,800 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64 pTM=0.489 ipTM=0.316
2024-12-10 02:48:23,756 Relaxation took 87.0s
2024-12-10 02:48:23,756 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.8 pTM=0.471 ipTM=0.264
2024-12-10 02:49:44,803 Relaxation took 81.0s
2024-12-10 02:49:44,803 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63 pTM=0.448 ipTM=0.241
2024-12-10 02:50:58,261 Relaxation took 73.5s
2024-12-10 02:50:58,261 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.5 pTM=0.433 ipTM=0.21
2024-12-10 02:52:09,751 Relaxation took 71.5s
2024-12-10 02:52:09,751 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62 pTM=0.441 ipTM=0.201
2024-12-10 02:52:11,544 Done